Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807019071/zl2018sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807019071/zl2018Isup2.hkl |
CCDC reference: 647613
Freshly prepared pivaloylisothiocyanate (1.43 g, 10 mmol) in acetone (30 ml) was stirred for 15 minutes. Neat 3-bromoaniline (1.72 g, 10 mmol) was then added and the resulting mixture was stirred for 1 h. The reaction mixture was poured into acidified water and stirred well. The solid product was separated and washed with deionized water and purified by recrystallization from methanol/ 1,1-dichloromethane (1:1 v/v) to give fine crystals of (I), with an overall yield of 85%.
The C atoms of the t-butyl group were found to be disordered over two sites and were refined using similarity restraints (DELU and SIMU). Refinement of the occupancies converged to 0.819 (12) for C10 to C12 and 0.191 (12) for C13 to C15. H atoms were included using the riding model approximation with N—H 0.88 and C—H 0.95 - 0.98 Å, and with Uiso(H) = 1.2 Ueq(C and N) or Uiso(H) = 1.5 Ueq(Cmethyl).
The background to this study has been set out in our previous work for the structural chemistry of N,N'-disubstituted thioureas (Shoukat et al., 2007). Herein, as a continuation of these studies, the structure of the title compound (I) is described. A depiction of the molecule is given in Fig. 1. Bond lengths and angles, see the selected geometric parameters table, can be regarded as typical for N,N'-disubstituted thiourea compounds as found in the Cambridge Structural Database v5.28 (Allen, 2002; Khawar Rauf et al., 2006). The molecule exists in its thione form with typical thiourea C—S and C—O bond distances, as well as shortened C—N bonds (See selected geometric parameters table). The molecule also features an intramolecular N—H···O hydrogen bond (See hydrogen-bond geometry table) which stears the thiocarbonyl and carbonyl groups to be almost coplanar, as reflected by the torsion angles of 0.5 (7)° for O(1)—C(2)—N(2)—C(1) and -5.8 (6)° for N(1)—C(1)—N(2)—C(2). The plane containing the S1, O1, N1, N2, C1 & C2 atoms is almost perpendicular to the phenyl ring with a dihedral angle of 86.13 (11)°.
For related literature, see: Shoukat et al. (2007); Khawar Rauf et al. (2006); Allen (2002).
Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2001); cell refinement: CrystalClear; data reduction: TEXSAN (Molecular Structure Corporation & Rigaku, 2004); program(s) used to solve structure: SIR97 (Altomare, 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97 and TEXSAN.
C12H15BrN2OS | F(000) = 640 |
Mr = 315.23 | Dx = 1.552 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71070 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 4509 reflections |
a = 6.188 (4) Å | θ = 3.3–27.5° |
b = 10.250 (7) Å | µ = 3.19 mm−1 |
c = 21.268 (14) Å | T = 113 K |
V = 1348.9 (15) Å3 | Block, colorless |
Z = 4 | 0.51 × 0.42 × 0.21 mm |
Rigaku/MSC Mercury CCD diffractometer | 3073 independent reflections |
Graphite monochromator | 2965 reflections with I > 2σ(I) |
Detector resolution: 14.62 pixels mm-1 | Rint = 0.051 |
ω scans | θmax = 27.5°, θmin = 3.4° |
Absorption correction: integration (NUMABS; Higashi, 1999) | h = −8→5 |
Tmin = 0.537, Tmax = 0.715 | k = −13→12 |
10869 measured reflections | l = −26→27 |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.042 | w = 1/[σ2(Fo2) + 2.2104P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.082 | (Δ/σ)max = 0.003 |
S = 1.21 | Δρmax = 0.66 e Å−3 |
3073 reflections | Δρmin = −0.45 e Å−3 |
189 parameters | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
66 restraints | Extinction coefficient: 0.0030 (8) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 1275 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: 0.012 (12) |
C12H15BrN2OS | V = 1348.9 (15) Å3 |
Mr = 315.23 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 6.188 (4) Å | µ = 3.19 mm−1 |
b = 10.250 (7) Å | T = 113 K |
c = 21.268 (14) Å | 0.51 × 0.42 × 0.21 mm |
Rigaku/MSC Mercury CCD diffractometer | 3073 independent reflections |
Absorption correction: integration (NUMABS; Higashi, 1999) | 2965 reflections with I > 2σ(I) |
Tmin = 0.537, Tmax = 0.715 | Rint = 0.051 |
10869 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | H-atom parameters constrained |
wR(F2) = 0.082 | Δρmax = 0.66 e Å−3 |
S = 1.21 | Δρmin = −0.45 e Å−3 |
3073 reflections | Absolute structure: Flack (1983), 1275 Friedel pairs |
189 parameters | Absolute structure parameter: 0.012 (12) |
66 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.6304 (6) | 0.3939 (4) | 0.97247 (17) | 0.0152 (7) | |
S1 | 0.70985 (18) | 0.32987 (9) | 1.04111 (5) | 0.0182 (2) | |
N1 | 0.4986 (5) | 0.4961 (3) | 0.96633 (15) | 0.0172 (7) | |
H1 | 0.4677 | 0.5232 | 0.9281 | 0.021* | |
C2 | 0.6416 (7) | 0.3735 (4) | 0.85578 (18) | 0.0191 (8) | |
O1 | 0.5088 (6) | 0.4596 (3) | 0.84607 (13) | 0.0300 (8) | |
N2 | 0.7040 (6) | 0.3399 (3) | 0.91598 (15) | 0.0156 (7) | |
H2 | 0.8010 | 0.2774 | 0.9192 | 0.019* | |
C3 | 0.4040 (7) | 0.5643 (4) | 1.01863 (18) | 0.0176 (8) | |
C4 | 0.5135 (6) | 0.6714 (3) | 1.04368 (18) | 0.0166 (8) | |
H4 | 0.6531 | 0.6954 | 1.0291 | 0.020* | |
C5 | 0.4098 (7) | 0.7419 (3) | 1.09107 (18) | 0.0174 (8) | |
C6 | 0.2083 (7) | 0.7088 (4) | 1.11360 (18) | 0.0201 (8) | |
H6 | 0.1426 | 0.7581 | 1.1463 | 0.024* | |
C7 | 0.1024 (7) | 0.6014 (4) | 1.08742 (19) | 0.0223 (9) | |
H7 | −0.0371 | 0.5776 | 1.1021 | 0.027* | |
C8 | 0.2004 (8) | 0.5286 (4) | 1.03973 (19) | 0.0203 (8) | |
H8 | 0.1283 | 0.4555 | 1.0220 | 0.024* | |
Br1 | 0.55861 (7) | 0.88797 (4) | 1.125472 (19) | 0.02269 (12) | |
C9 | 0.7379 (8) | 0.2956 (4) | 0.80096 (19) | 0.0210 (8) | |
C10 | 0.9613 (13) | 0.2404 (8) | 0.8134 (3) | 0.0386 (17) | 0.819 (12) |
H10A | 1.0588 | 0.3110 | 0.8261 | 0.058* | 0.819 (12) |
H10B | 1.0166 | 0.1992 | 0.7751 | 0.058* | 0.819 (12) |
H10C | 0.9530 | 0.1753 | 0.8471 | 0.058* | 0.819 (12) |
C11 | 0.7487 (14) | 0.3872 (6) | 0.7432 (3) | 0.0330 (15) | 0.819 (12) |
H11A | 0.8357 | 0.4642 | 0.7535 | 0.049* | 0.819 (12) |
H11B | 0.6023 | 0.4146 | 0.7316 | 0.049* | 0.819 (12) |
H11C | 0.8151 | 0.3408 | 0.7078 | 0.049* | 0.819 (12) |
C12 | 0.5761 (14) | 0.1849 (6) | 0.7871 (3) | 0.0336 (15) | 0.819 (12) |
H12A | 0.6288 | 0.1327 | 0.7517 | 0.050* | 0.819 (12) |
H12B | 0.4351 | 0.2225 | 0.7764 | 0.050* | 0.819 (12) |
H12C | 0.5615 | 0.1293 | 0.8243 | 0.050* | 0.819 (12) |
C13 | 0.995 (5) | 0.303 (3) | 0.8023 (15) | 0.030 (3) | 0.181 (12) |
H13A | 1.0447 | 0.3064 | 0.8460 | 0.045* | 0.181 (12) |
H13B | 1.0432 | 0.3809 | 0.7799 | 0.045* | 0.181 (12) |
H13C | 1.0547 | 0.2249 | 0.7819 | 0.045* | 0.181 (12) |
C14 | 0.645 (6) | 0.350 (3) | 0.7436 (13) | 0.028 (3) | 0.181 (12) |
H14A | 0.6911 | 0.4404 | 0.7386 | 0.042* | 0.181 (12) |
H14B | 0.4866 | 0.3461 | 0.7462 | 0.042* | 0.181 (12) |
H14C | 0.6935 | 0.2984 | 0.7073 | 0.042* | 0.181 (12) |
C15 | 0.650 (6) | 0.160 (3) | 0.8086 (16) | 0.033 (3) | 0.181 (12) |
H15A | 0.6254 | 0.1212 | 0.7671 | 0.049* | 0.181 (12) |
H15B | 0.5132 | 0.1633 | 0.8318 | 0.049* | 0.181 (12) |
H15C | 0.7541 | 0.1065 | 0.8320 | 0.049* | 0.181 (12) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0096 (17) | 0.0164 (15) | 0.0195 (18) | −0.0053 (15) | 0.0030 (13) | 0.0002 (16) |
S1 | 0.0173 (5) | 0.0204 (4) | 0.0171 (5) | 0.0018 (4) | −0.0001 (4) | 0.0012 (4) |
N1 | 0.0178 (19) | 0.0157 (14) | 0.0182 (16) | 0.0035 (12) | 0.0013 (13) | −0.0010 (12) |
C2 | 0.019 (2) | 0.0200 (18) | 0.0186 (19) | −0.0002 (16) | 0.0028 (15) | −0.0007 (15) |
O1 | 0.037 (2) | 0.0329 (16) | 0.0199 (15) | 0.0177 (14) | −0.0019 (13) | −0.0036 (12) |
N2 | 0.0150 (17) | 0.0140 (13) | 0.0177 (16) | 0.0019 (13) | 0.0001 (14) | −0.0034 (12) |
C3 | 0.022 (2) | 0.0170 (15) | 0.0137 (18) | 0.0051 (15) | 0.0039 (16) | 0.0008 (14) |
C4 | 0.014 (2) | 0.0164 (16) | 0.0193 (18) | 0.0037 (14) | 0.0029 (15) | 0.0028 (15) |
C5 | 0.021 (2) | 0.0158 (16) | 0.0152 (18) | 0.0016 (16) | −0.0041 (17) | −0.0010 (14) |
C6 | 0.020 (2) | 0.0239 (18) | 0.017 (2) | 0.0050 (16) | 0.0047 (17) | −0.0005 (15) |
C7 | 0.020 (2) | 0.0239 (19) | 0.023 (2) | −0.0046 (18) | 0.0061 (16) | 0.0000 (17) |
C8 | 0.024 (2) | 0.0168 (18) | 0.020 (2) | −0.0010 (16) | 0.0006 (18) | −0.0021 (15) |
Br1 | 0.0280 (2) | 0.01807 (17) | 0.02199 (19) | −0.00228 (18) | −0.00135 (19) | −0.00341 (17) |
C9 | 0.027 (2) | 0.0192 (16) | 0.0172 (18) | 0.0047 (15) | −0.0005 (16) | −0.0038 (14) |
C10 | 0.034 (3) | 0.057 (4) | 0.025 (3) | 0.019 (3) | −0.003 (3) | −0.016 (3) |
C11 | 0.052 (4) | 0.023 (2) | 0.024 (2) | 0.009 (3) | 0.014 (3) | 0.001 (2) |
C12 | 0.039 (3) | 0.032 (3) | 0.030 (3) | −0.009 (3) | 0.004 (3) | −0.009 (2) |
C13 | 0.028 (4) | 0.039 (7) | 0.024 (7) | 0.006 (5) | −0.001 (5) | −0.009 (7) |
C14 | 0.036 (7) | 0.031 (6) | 0.018 (5) | 0.018 (6) | 0.002 (6) | −0.008 (5) |
C15 | 0.044 (7) | 0.025 (5) | 0.029 (7) | −0.003 (5) | 0.004 (7) | −0.009 (5) |
C1—N1 | 1.334 (5) | C9—C10 | 1.517 (8) |
C1—N2 | 1.399 (5) | C9—C12 | 1.542 (8) |
C1—S1 | 1.674 (4) | C9—C11 | 1.548 (7) |
N1—C3 | 1.439 (5) | C9—C13 | 1.59 (3) |
N1—H1 | 0.8800 | C10—H10A | 0.9800 |
C2—O1 | 1.224 (5) | C10—H10B | 0.9800 |
C2—N2 | 1.381 (5) | C10—H10C | 0.9800 |
C2—C9 | 1.533 (5) | C11—H11A | 0.9800 |
N2—H2 | 0.8800 | C11—H11B | 0.9800 |
C3—C8 | 1.387 (6) | C11—H11C | 0.9800 |
C3—C4 | 1.396 (5) | C12—H12A | 0.9800 |
C4—C5 | 1.396 (5) | C12—H12B | 0.9800 |
C4—H4 | 0.9500 | C12—H12C | 0.9800 |
C5—C6 | 1.378 (6) | C13—H13A | 0.9800 |
C5—Br1 | 1.904 (4) | C13—H13B | 0.9800 |
C6—C7 | 1.397 (6) | C13—H13C | 0.9800 |
C6—H6 | 0.9500 | C14—H14A | 0.9800 |
C7—C8 | 1.397 (6) | C14—H14B | 0.9800 |
C7—H7 | 0.9500 | C14—H14C | 0.9800 |
C8—H8 | 0.9500 | C15—H15A | 0.9800 |
C9—C14 | 1.46 (3) | C15—H15B | 0.9800 |
C9—C15 | 1.50 (3) | C15—H15C | 0.9800 |
N1—C1—N2 | 115.2 (3) | C2—C9—C12 | 106.0 (4) |
N1—C1—S1 | 124.9 (3) | C10—C9—C11 | 109.0 (5) |
N2—C1—S1 | 119.9 (3) | C2—C9—C11 | 107.8 (4) |
C1—N1—C3 | 123.7 (3) | C12—C9—C11 | 108.8 (4) |
C1—N1—H1 | 118.1 | C14—C9—C13 | 113.1 (17) |
C3—N1—H1 | 118.1 | C15—C9—C13 | 113.7 (18) |
O1—C2—N2 | 121.6 (4) | C2—C9—C13 | 110.6 (11) |
O1—C2—C9 | 120.5 (4) | C9—C10—H10A | 109.5 |
N2—C2—C9 | 117.8 (3) | C9—C10—H10B | 109.5 |
C2—N2—C1 | 127.3 (3) | C9—C10—H10C | 109.5 |
C2—N2—H2 | 116.3 | C9—C11—H11A | 109.5 |
C1—N2—H2 | 116.3 | C9—C11—H11B | 109.5 |
C8—C3—C4 | 121.7 (4) | C9—C11—H11C | 109.5 |
C8—C3—N1 | 119.4 (4) | C9—C12—H12A | 109.5 |
C4—C3—N1 | 118.7 (4) | C9—C12—H12B | 109.5 |
C3—C4—C5 | 117.3 (4) | C9—C12—H12C | 109.5 |
C3—C4—H4 | 121.3 | C9—C13—H13A | 109.5 |
C5—C4—H4 | 121.3 | C9—C13—H13B | 109.5 |
C6—C5—C4 | 122.6 (4) | H13A—C13—H13B | 109.5 |
C6—C5—Br1 | 119.8 (3) | C9—C13—H13C | 109.5 |
C4—C5—Br1 | 117.5 (3) | H13A—C13—H13C | 109.5 |
C5—C6—C7 | 118.7 (4) | H13B—C13—H13C | 109.5 |
C5—C6—H6 | 120.7 | C9—C14—H14A | 109.5 |
C7—C6—H6 | 120.7 | C9—C14—H14B | 109.5 |
C6—C7—C8 | 120.5 (4) | H14A—C14—H14B | 109.5 |
C6—C7—H7 | 119.8 | C9—C14—H14C | 109.5 |
C8—C7—H7 | 119.8 | H14A—C14—H14C | 109.5 |
C3—C8—C7 | 119.2 (4) | H14B—C14—H14C | 109.5 |
C3—C8—H8 | 120.4 | C9—C15—H15A | 109.5 |
C7—C8—H8 | 120.4 | C9—C15—H15B | 109.5 |
C14—C9—C15 | 107.3 (18) | H15A—C15—H15B | 109.5 |
C14—C9—C2 | 106.6 (11) | C9—C15—H15C | 109.5 |
C15—C9—C2 | 105.0 (12) | H15A—C15—H15C | 109.5 |
C10—C9—C2 | 114.6 (4) | H15B—C15—H15C | 109.5 |
C10—C9—C12 | 110.5 (5) | ||
N2—C1—N1—C3 | 179.3 (3) | C4—C3—C8—C7 | −0.2 (6) |
S1—C1—N1—C3 | −0.9 (5) | N1—C3—C8—C7 | −175.3 (4) |
O1—C2—N2—C1 | 0.5 (7) | C6—C7—C8—C3 | 0.0 (6) |
C9—C2—N2—C1 | −177.3 (4) | O1—C2—C9—C14 | 1.7 (17) |
N1—C1—N2—C2 | −5.8 (6) | N2—C2—C9—C14 | 179.5 (17) |
S1—C1—N2—C2 | 174.4 (3) | O1—C2—C9—C15 | −112.0 (17) |
C1—N1—C3—C8 | −93.5 (5) | N2—C2—C9—C15 | 65.8 (17) |
C1—N1—C3—C4 | 91.3 (4) | O1—C2—C9—C10 | 153.2 (5) |
C8—C3—C4—C5 | −0.1 (6) | N2—C2—C9—C10 | −29.0 (6) |
N1—C3—C4—C5 | 175.0 (3) | O1—C2—C9—C12 | −84.6 (6) |
C3—C4—C5—C6 | 0.6 (6) | N2—C2—C9—C12 | 93.2 (5) |
C3—C4—C5—Br1 | 179.9 (3) | O1—C2—C9—C11 | 31.7 (6) |
C4—C5—C6—C7 | −0.8 (6) | N2—C2—C9—C11 | −150.5 (5) |
Br1—C5—C6—C7 | 179.9 (3) | O1—C2—C9—C13 | 125.0 (14) |
C5—C6—C7—C8 | 0.5 (6) | N2—C2—C9—C13 | −57.2 (14) |
Experimental details
Crystal data | |
Chemical formula | C12H15BrN2OS |
Mr | 315.23 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 113 |
a, b, c (Å) | 6.188 (4), 10.250 (7), 21.268 (14) |
V (Å3) | 1348.9 (15) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 3.19 |
Crystal size (mm) | 0.51 × 0.42 × 0.21 |
Data collection | |
Diffractometer | Rigaku/MSC Mercury CCD |
Absorption correction | Integration (NUMABS; Higashi, 1999) |
Tmin, Tmax | 0.537, 0.715 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10869, 3073, 2965 |
Rint | 0.051 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.082, 1.21 |
No. of reflections | 3073 |
No. of parameters | 189 |
No. of restraints | 66 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.66, −0.45 |
Absolute structure | Flack (1983), 1275 Friedel pairs |
Absolute structure parameter | 0.012 (12) |
Computer programs: CrystalClear (Molecular Structure Corporation & Rigaku, 2001), CrystalClear, TEXSAN (Molecular Structure Corporation & Rigaku, 2004), SIR97 (Altomare, 1999), SHELXL97 (Sheldrick, 1997), ORTEPII (Johnson, 1976), SHELXL97 and TEXSAN.
C1—N1 | 1.334 (5) | N1—C3 | 1.439 (5) |
C1—N2 | 1.399 (5) | C2—O1 | 1.224 (5) |
C1—S1 | 1.674 (4) | C2—N2 | 1.381 (5) |
O1—C2—N2—C1 | 0.5 (7) | N1—C1—N2—C2 | −5.8 (6) |
The background to this study has been set out in our previous work for the structural chemistry of N,N'-disubstituted thioureas (Shoukat et al., 2007). Herein, as a continuation of these studies, the structure of the title compound (I) is described. A depiction of the molecule is given in Fig. 1. Bond lengths and angles, see the selected geometric parameters table, can be regarded as typical for N,N'-disubstituted thiourea compounds as found in the Cambridge Structural Database v5.28 (Allen, 2002; Khawar Rauf et al., 2006). The molecule exists in its thione form with typical thiourea C—S and C—O bond distances, as well as shortened C—N bonds (See selected geometric parameters table). The molecule also features an intramolecular N—H···O hydrogen bond (See hydrogen-bond geometry table) which stears the thiocarbonyl and carbonyl groups to be almost coplanar, as reflected by the torsion angles of 0.5 (7)° for O(1)—C(2)—N(2)—C(1) and -5.8 (6)° for N(1)—C(1)—N(2)—C(2). The plane containing the S1, O1, N1, N2, C1 & C2 atoms is almost perpendicular to the phenyl ring with a dihedral angle of 86.13 (11)°.