The title compound, dendocarbin A [systematic name: (1R,5aS,9aS,9bR)-1-hydroxy-6,6,9a-trimethyldodecahydronaphtho[1,2-c]furan-3-one], C15H22O3, is a sesquiterpene lactone isolated from Drimys winteri var chilensis. The monoclinic phase described herein displays an identical molecular structure to the orthorhombic phase that we reported previously [Paz Robles et al. (2014). Acta Cryst. C70, 1007-1010], while varying significantly in chain pitch, and can thus be considered as a borderline case of one-dimensional isostructural polymorphism.
Supporting information
CCDC reference: 1053397
Data collection: CrysAlis PRO (Oxford Diffraction, 2009); cell refinement: CrysAlis PRO (Oxford Diffraction, 2009); data reduction: CrysAlis PRO (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL2013 (Sheldrick, 2008) and PLATON (Spek, 2009).
(1
R,5a
S,9a
S,9b
R)-1-Hydroxy-6,6,9a-trimethyldodecahydronaphtho[1,2-
c]furan-3-one
top
Crystal data top
C15H22O3 | F(000) = 272 |
Mr = 250.32 | Dx = 1.152 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.2892 (10) Å | Cell parameters from 3400 reflections |
b = 8.3401 (7) Å | θ = 3.9–25.4° |
c = 11.0225 (13) Å | µ = 0.08 mm−1 |
β = 108.750 (13)° | T = 295 K |
V = 721.58 (15) Å3 | Block, colourless |
Z = 2 | 0.24 × 0.18 × 0.12 mm |
Data collection top
Oxford Diffraction Gemini CCD S Ultra diffractometer | 2519 reflections with I > 2σ(I) |
ω scans, thick slices | Rint = 0.032 |
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009) | θmax = 28.8°, θmin = 3.9° |
Tmin = 0.967, Tmax = 0.988 | h = −11→11 |
11012 measured reflections | k = −11→11 |
3411 independent reflections | l = −14→14 |
Refinement top
Refinement on F2 | 1 restraint |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.043 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.097 | w = 1/[σ2(Fo2) + (0.0402P)2 + 0.0646P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max < 0.001 |
3411 reflections | Δρmax = 0.15 e Å−3 |
170 parameters | Δρmin = −0.16 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.3432 (2) | 0.3387 (3) | 0.3519 (2) | 0.0627 (5) | |
H1O | 0.308 (4) | 0.309 (4) | 0.409 (3) | 0.073 (10)* | |
O2 | 0.7646 (2) | 0.6896 (2) | 0.46443 (18) | 0.0591 (5) | |
O3 | 0.5689 (2) | 0.5045 (2) | 0.45756 (17) | 0.0553 (5) | |
C1 | 0.5275 (4) | 0.0419 (3) | 0.2243 (3) | 0.0612 (7) | |
H1A | 0.4799 | 0.0129 | 0.2909 | 0.073* | |
H1B | 0.4386 | 0.0943 | 0.1562 | 0.073* | |
C2 | 0.5820 (5) | −0.1096 (4) | 0.1718 (3) | 0.0824 (10) | |
H2A | 0.6639 | −0.1675 | 0.2408 | 0.099* | |
H2B | 0.4838 | −0.1783 | 0.1357 | 0.099* | |
C3 | 0.6610 (5) | −0.0691 (4) | 0.0695 (3) | 0.0839 (10) | |
H3A | 0.5760 | −0.0165 | −0.0010 | 0.101* | |
H3B | 0.6932 | −0.1679 | 0.0371 | 0.101* | |
C4 | 0.8176 (4) | 0.0393 (3) | 0.1162 (3) | 0.0650 (8) | |
C5 | 0.7668 (3) | 0.1913 (3) | 0.1786 (2) | 0.0468 (6) | |
H5 | 0.6822 | 0.2465 | 0.1078 | 0.056* | |
C6 | 0.9134 (3) | 0.3110 (3) | 0.2271 (3) | 0.0609 (7) | |
H6A | 1.0134 | 0.2543 | 0.2801 | 0.073* | |
H6B | 0.9401 | 0.3543 | 0.1541 | 0.073* | |
C7 | 0.8772 (3) | 0.4465 (3) | 0.3024 (2) | 0.0514 (6) | |
H7 | 0.9555 | 0.5297 | 0.3282 | 0.062* | |
C8 | 0.7363 (3) | 0.4511 (3) | 0.3333 (2) | 0.0423 (5) | |
C9 | 0.6015 (3) | 0.3248 (3) | 0.2981 (2) | 0.0397 (5) | |
H9 | 0.5178 | 0.3558 | 0.2162 | 0.048* | |
C10 | 0.6744 (3) | 0.1602 (3) | 0.2793 (2) | 0.0425 (5) | |
C11 | 0.5168 (3) | 0.3423 (3) | 0.4014 (2) | 0.0457 (6) | |
H11 | 0.5577 | 0.2592 | 0.4670 | 0.055* | |
C12 | 0.6971 (3) | 0.5629 (3) | 0.4220 (2) | 0.0467 (6) | |
C13 | 0.9684 (5) | −0.0556 (4) | 0.2049 (3) | 0.0888 (11) | |
H13A | 0.9368 | −0.1005 | 0.2743 | 0.133* | |
H13B | 1.0641 | 0.0148 | 0.2386 | 0.133* | |
H13C | 0.9986 | −0.1403 | 0.1573 | 0.133* | |
C14 | 0.8664 (5) | 0.0924 (5) | −0.0011 (3) | 0.0933 (11) | |
H14A | 0.8705 | 0.0004 | −0.0524 | 0.140* | |
H14B | 0.9762 | 0.1431 | 0.0270 | 0.140* | |
H14C | 0.7830 | 0.1667 | −0.0512 | 0.140* | |
C15 | 0.7933 (3) | 0.0989 (3) | 0.4082 (2) | 0.0506 (6) | |
H15A | 0.7319 | 0.0925 | 0.4685 | 0.076* | |
H15B | 0.8876 | 0.1713 | 0.4399 | 0.076* | |
H15C | 0.8350 | −0.0055 | 0.3968 | 0.076* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0392 (10) | 0.0867 (14) | 0.0655 (12) | −0.0038 (9) | 0.0214 (9) | 0.0109 (11) |
O2 | 0.0632 (12) | 0.0465 (10) | 0.0743 (12) | −0.0044 (9) | 0.0315 (10) | −0.0102 (10) |
O3 | 0.0548 (10) | 0.0582 (10) | 0.0636 (11) | −0.0037 (8) | 0.0337 (9) | −0.0075 (9) |
C1 | 0.0668 (17) | 0.0648 (18) | 0.0476 (13) | −0.0229 (14) | 0.0124 (12) | −0.0067 (13) |
C2 | 0.109 (3) | 0.0650 (19) | 0.0684 (19) | −0.0350 (18) | 0.0211 (19) | −0.0268 (16) |
C3 | 0.116 (3) | 0.073 (2) | 0.0601 (18) | −0.011 (2) | 0.0242 (19) | −0.0281 (16) |
C4 | 0.082 (2) | 0.0631 (18) | 0.0529 (15) | 0.0051 (15) | 0.0252 (15) | −0.0128 (14) |
C5 | 0.0521 (14) | 0.0506 (14) | 0.0389 (12) | −0.0007 (12) | 0.0166 (10) | −0.0026 (11) |
C6 | 0.0585 (16) | 0.0675 (17) | 0.0694 (17) | −0.0092 (14) | 0.0384 (14) | −0.0122 (15) |
C7 | 0.0540 (15) | 0.0499 (14) | 0.0571 (14) | −0.0124 (12) | 0.0274 (12) | −0.0041 (12) |
C8 | 0.0460 (13) | 0.0422 (12) | 0.0418 (12) | −0.0017 (11) | 0.0187 (10) | 0.0038 (10) |
C9 | 0.0371 (11) | 0.0480 (13) | 0.0329 (11) | −0.0022 (10) | 0.0099 (9) | 0.0051 (10) |
C10 | 0.0450 (13) | 0.0446 (13) | 0.0350 (11) | −0.0066 (10) | 0.0088 (10) | −0.0011 (10) |
C11 | 0.0397 (13) | 0.0534 (15) | 0.0457 (12) | −0.0018 (11) | 0.0160 (10) | 0.0056 (12) |
C12 | 0.0469 (14) | 0.0450 (14) | 0.0515 (13) | 0.0041 (11) | 0.0203 (11) | 0.0042 (12) |
C13 | 0.107 (3) | 0.075 (2) | 0.087 (2) | 0.027 (2) | 0.035 (2) | −0.0165 (19) |
C14 | 0.123 (3) | 0.104 (3) | 0.070 (2) | 0.012 (2) | 0.055 (2) | −0.016 (2) |
C15 | 0.0584 (15) | 0.0479 (14) | 0.0418 (13) | 0.0033 (11) | 0.0108 (11) | 0.0013 (11) |
Geometric parameters (Å, º) top
O1—C11 | 1.365 (3) | C6—C7 | 1.489 (3) |
O1—H1O | 0.81 (3) | C6—H6A | 0.9700 |
O2—C12 | 1.217 (3) | C6—H6B | 0.9700 |
O3—C12 | 1.337 (3) | C7—C8 | 1.318 (3) |
O3—C11 | 1.493 (3) | C7—H7 | 0.9300 |
C1—C2 | 1.518 (4) | C8—C12 | 1.461 (3) |
C1—C10 | 1.533 (3) | C8—C9 | 1.493 (3) |
C1—H1A | 0.9700 | C9—C11 | 1.525 (3) |
C1—H1B | 0.9700 | C9—C10 | 1.540 (3) |
C2—C3 | 1.512 (5) | C9—H9 | 0.9800 |
C2—H2A | 0.9700 | C10—C15 | 1.533 (3) |
C2—H2B | 0.9700 | C11—H11 | 0.9800 |
C3—C4 | 1.529 (4) | C13—H13A | 0.9600 |
C3—H3A | 0.9700 | C13—H13B | 0.9600 |
C3—H3B | 0.9700 | C13—H13C | 0.9600 |
C4—C13 | 1.536 (5) | C14—H14A | 0.9600 |
C4—C14 | 1.539 (4) | C14—H14B | 0.9600 |
C4—C5 | 1.563 (4) | C14—H14C | 0.9600 |
C5—C6 | 1.531 (3) | C15—H15A | 0.9600 |
C5—C10 | 1.560 (3) | C15—H15B | 0.9600 |
C5—H5 | 0.9800 | C15—H15C | 0.9600 |
| | | |
C11—O1—H1O | 107 (2) | C7—C8—C9 | 124.3 (2) |
C12—O3—C11 | 111.10 (18) | C12—C8—C9 | 108.38 (19) |
C2—C1—C10 | 113.0 (2) | C8—C9—C11 | 102.97 (18) |
C2—C1—H1A | 109.0 | C8—C9—C10 | 111.75 (17) |
C10—C1—H1A | 109.0 | C11—C9—C10 | 118.68 (18) |
C2—C1—H1B | 109.0 | C8—C9—H9 | 107.6 |
C10—C1—H1B | 109.0 | C11—C9—H9 | 107.6 |
H1A—C1—H1B | 107.8 | C10—C9—H9 | 107.6 |
C3—C2—C1 | 110.6 (3) | C1—C10—C15 | 110.2 (2) |
C3—C2—H2A | 109.5 | C1—C10—C9 | 109.34 (19) |
C1—C2—H2A | 109.5 | C15—C10—C9 | 109.63 (18) |
C3—C2—H2B | 109.5 | C1—C10—C5 | 109.53 (19) |
C1—C2—H2B | 109.5 | C15—C10—C5 | 113.5 (2) |
H2A—C2—H2B | 108.1 | C9—C10—C5 | 104.54 (17) |
C2—C3—C4 | 113.9 (2) | O1—C11—O3 | 108.23 (19) |
C2—C3—H3A | 108.8 | O1—C11—C9 | 112.26 (19) |
C4—C3—H3A | 108.8 | O3—C11—C9 | 104.75 (18) |
C2—C3—H3B | 108.8 | O1—C11—H11 | 110.5 |
C4—C3—H3B | 108.8 | O3—C11—H11 | 110.5 |
H3A—C3—H3B | 107.7 | C9—C11—H11 | 110.5 |
C3—C4—C13 | 109.8 (3) | O2—C12—O3 | 121.0 (2) |
C3—C4—C14 | 108.1 (3) | O2—C12—C8 | 129.6 (2) |
C13—C4—C14 | 107.6 (3) | O3—C12—C8 | 109.4 (2) |
C3—C4—C5 | 107.9 (2) | C4—C13—H13A | 109.5 |
C13—C4—C5 | 114.7 (2) | C4—C13—H13B | 109.5 |
C14—C4—C5 | 108.5 (3) | H13A—C13—H13B | 109.5 |
C6—C5—C10 | 112.09 (18) | C4—C13—H13C | 109.5 |
C6—C5—C4 | 112.8 (2) | H13A—C13—H13C | 109.5 |
C10—C5—C4 | 116.2 (2) | H13B—C13—H13C | 109.5 |
C6—C5—H5 | 104.8 | C4—C14—H14A | 109.5 |
C10—C5—H5 | 104.8 | C4—C14—H14B | 109.5 |
C4—C5—H5 | 104.8 | H14A—C14—H14B | 109.5 |
C7—C6—C5 | 114.2 (2) | C4—C14—H14C | 109.5 |
C7—C6—H6A | 108.7 | H14A—C14—H14C | 109.5 |
C5—C6—H6A | 108.7 | H14B—C14—H14C | 109.5 |
C7—C6—H6B | 108.7 | C10—C15—H15A | 109.5 |
C5—C6—H6B | 108.7 | C10—C15—H15B | 109.5 |
H6A—C6—H6B | 107.6 | H15A—C15—H15B | 109.5 |
C8—C7—C6 | 121.4 (2) | C10—C15—H15C | 109.5 |
C8—C7—H7 | 119.3 | H15A—C15—H15C | 109.5 |
C6—C7—H7 | 119.3 | H15B—C15—H15C | 109.5 |
C7—C8—C12 | 126.7 (2) | | |
Comparison of the hydrogen-bond geometries of (I) and (II) (Å, °) topNo. | D—H···A | D—H | | H···A | | D···A | | D—H···A | |
| | (I) | (II) | (I) | (II) | (I) | (II) | (I) | (II) |
#1 | O1—H1O···O2i,iii | 0.81 | 0.81 (3) | 2.05 | 1.96 (3) | 2.85 | 2.758 (3) | 17 | /167 (3) |
#2 | C11—H11···O3i,iii | 0.98 | 0.98 | 2.40 | 2.62 | 3.19 | 3.40 | 137 | 137 |
#3 | C6—H6B···O1ii,iv | 0.97 | 0.97 | 2.67 | 2.69 | 3.63 | 3.39 | 172 | 130 |
Double values and symmetry codes appear in the order (I)/(II)
[the O—H and C—H values in (I) have been normalized to match those in
(II), the remaining values being recalculated accordingly].
Symmetry codes for (I): (i) x+1/2, -y+3/2, -z+1;
(ii) -x, y+1/2, -z+1/2; for (II):
(iii) -x+1, y-1/2, -z+1;
(iv) x+1, y, z. |