Download citation
Download citation
link to html
Crystals of bis(2-ethyl-3-hy­droxy-6-methyl­pyridinium) succin­ate-succin­ic acid (1/1), C8H12NO+·0.5C4H4O42-·0.5C4H6O4, (I), and 2-ethyl-3-hy­droxy-6-methyl­pyridinium hydrogen suc­cinate, C8H12NO+·C4H5O4-, (II), were obtained by reaction of 2-ethyl-6-methyl­pyridin-3-ol with succinic acid. The succinate anion and succinic acid mol­ecule in (I) are located about centres of inversion. Inter­molecular O-H...O, N-H...O and C-H...O hydrogen bonds are responsible for the formation of a three-dimensional network in the crystal structure of (I) and a two-dimensional network in the crystal structure of (II). Both structures are additionally stabilized by [pi]-[pi] inter­actions between symmetry-related pyridine rings, forming a rod-like cationic arrangement for (I) and cationic dimers for (II).

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270111054692/yf3010sup1.cif
Contains datablocks I, II, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270111054692/yf3010Isup2.hkl
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270111054692/yf3010IIsup3.hkl
Contains datablock II

cml

Chemical Markup Language (CML) file https://doi.org/10.1107/S0108270111054692/yf3010IIsup4.cml
Supplementary material

CCDC references: 866762; 866763

Comment top

A succinic acid derivative of 2-ethyl-6-methylpyridin-3-ol is used as a nootropic drug in medical practice (Voronina, 1992, and references therein). It is also known for its antioxidant (Klebanov et al., 2001), antihypoxant (Luk'yanova et al., 1990), cardioprotective (Golikov et al., 2004; Sidorenko et al., 2011) and antistressor (Tilekeyeva & Sitina, 2005; Sariev & Kravtsova, 2005) effects. As no crystal data are available for any succinic acid derivatives of 2-ethyl-6-methylpyridin-3-ol [Cambridge Structural Database (CSD), Version 5.32, November 2010; Allen, 2002], in the present work we intended to obtain structural information.

Our preliminary investigation, carried out by X-ray powder diffraction, revealed that the reaction of 2-ethyl-6-methylpyridin-3-ol with succinic acid (1:1 molar ratio) could give either one crystalline compound or its mixture with another one (the ratio of these products depends on the reaction conditions). The aim of the present work was to obtain pure crystalline samples of the compounds and investigate their crystal structures using single-crystal X-ray diffraction.

One of the above-mentioned crystalline compounds, bis(2-ethyl-3-hydroxy-6-methylpyridinium) succinate–succinic acid (1/1), (I) (Fig. 1), was obtained directly as a result of the reaction of 2-ethyl-6-methylpyridin-3-ol with succinic acid. A pure sample of another compound, 2-ethyl-3-hydroxy-6-methylpyridinium hydrogen succinate, (II) (Fig. 2), can be prepared by transformation of (I) (see Experimental).

The asymmetric unit of (I) comprises one 2-ethyl-6-methyl-3-hydroxypyridinium cation, half a succinate anion (fully deprotonated) and half a succinic acid molecule. All atoms occupy general positions. The succinate anion and succinic acid molecule are located about centres of inversion, imposing Ci symmetry on both moieties. However, their non-H-atom skeletons show almost planar configurations corresponding to noncrystallographic symmetry C2h, with r.m.s. deviations from planarity of 0.0056 Å for the succinic acid molecule and 0.0612 Å for the succinate anion (Pilati & Forni, 1998).

In (I), the bond lengths and valence angles are in the expected ranges for all moieties of the compound (Table 1) [Standard reference?]. In the carboxyl group of the succinic acid molecule, the C12—O121(H) bond length of 1.304 (2) Å is longer than the carbonyl group C12—O122 bond length of 1.196 (2) Å. The C10—O101 and C10—O102 bond lengths of the carboxylate groups of the succinate anion are close to each other, being 1.2587 (18) and 1.2327 (19) Å, respectively.

There are hydrogen bonds in the crystal structure of (I) (Table 2 and Fig. 3). Intermolecular O—H···O hydrogen bonds between the succinic acid molecules and the succinate anions connect the components into polymeric chains extending along the [210] direction. Each 2-ethyl-6-methyl-3-hydroxypyridinium cation is bonded to three such polymeric chains through three hydrogen bonds, namely N—H···O, O—H···O and C—H···O, forming a three-dimensional polymeric network. There are additional ππ interactions between the pyridine rings, with centroid–centroid (Cg···Cg) distances of about 3.58 Å [Cg···Cgi; symmetry code: (i) -x, -y + 1, -z + 1] and of about 3.74 Å [Cg···Cgii; symmetry code: (ii) -x + 1, -y + 1, -z + 1]. These ππ interactions result in the formation of a rod-like cationic arrangement extending along the a axis (Fig. 3).

The asymmetric unit of (II) includes one 2-ethyl-6-methyl-3-hydroxypyridinium cation and one hydrogen succinate anion having only one deprotonated carboxyl group. All atoms lie on general positions. The non-H-atom skeleton of the hydrogen succinate anion is almost planar, with a mean deviation of the atoms from the least-squares plane of 0.0076 (12) Å. Bond lengths in the 2-ethyl-6-methyl-3-hydroxypyridinium cation and hydrogen succinate anion are similar to the corresponding values in (I) (Table 3).

Hydrogen bonds in the crystal structure of (II) (Table 4 and Fig. 4) are similar to those in (I), including intermolecular O—H···O, N—H···O and C—H···O hydrogen bonds. However, the supramolecular structure is somewhat different from that of (I). O—H···O hydrogen bonds between the succinate anions form infinite chains running along the b axis. Each 2-ethyl-6-methyl-3-hydroxypyridinium cation is connected to two anionic chains, to one via O—H···O and C—H···O hydrogen bonds and to another through N—H···O hydrogen bonds, forming a two-dimensional network parallel to the (102) plane. There are also ππ interactions between the pyridine rings, with centroid–centroid distances of about 3.52 Å [Cg···Cgiii; symmetry code: (iii) -x + 1, -y, -z + 1]. These are responsible for the formation of cationic dimers, shown in Fig. 5. The crystal packing of (II) is shown in Fig. 6.

Related literature top

For related literature, see: Allen (2002); Golikov et al. (2004); Klebanov et al. (2001); Luk'yanova, Romanova, Chernobaeva, Lukinykh & Smirnov (1990); Pilati & Forni (1998); Sariev & Kravtsova (2005); Sidorenko et al. (2011); Tilekeyeva & Sitina (2005); Voronina (1992).

Experimental top

For the synthesis of (I), 2-ethyl-6-methylpyridin-3-ol (10.0 g, 73 mmol) and succinic acid (8.6 g, 73 mmol) were heated in propan-2-ol under reflux for 1 h. The reaction mixture was filtered and the solution obtained was cooled to room temperature. The precipitated crystals of (I) were collected, washed twice with acetone (10 ml) and dried in air (yield 11.2 g, 44%; m.p. 385–386 K). 1H NMR (500 MHz, D2O, δ, p.p.m.): 1.16 (t, 3H, J = 7.5 Hz, CH2CH3), 2.43 (s, 4H, CH2CH2), 2.48 (s, 3H, CH3), 2.84 (q, 2H, J = 7.5 Hz, CH2CH3), 7.34 (d, 1H, J = 9 Hz, aryl), 7.66 (d, 1H, J = 9 Hz, aryl). Single crystals of (I) suitable for X-ray analysis were selected from the reaction product.

For the synthesis of (II), compound (I) (5.0 g) was dissolved in a propan-2-ol–acetone mixture (9:1 v/v, 70 ml) under reflux. After refluxing for 30 min, the solution obtained was cooled to room temperature. The precipitated crystals were collected and dried in air to give a mixture of (I) and (II), with a melting interval of 385–393 K. To prepare a pure sample of (II), the obtained mixture was heated at 388–391 K in an oil bath for 30 min. The resulting slurry was left to cool to room temperature overnight. The resulting crystalline solid of (II) was ground to a fine polycrystalline powder (yield 3.2 g, 64%; m.p. 392–393 K). The 1H NMR spectrum of (II) was identical to that of (I). Single crystals of (II) suitable for X-ray analysis can be prepared by crystallization from acetone solutions of (I) or (II), using seed crystals of (II). In the present work, a solution of (I) was used for this purpose.

Refinement top

H atoms were included in geometrically calculated positions, with N—H = 0.86 Å, O—H = 0.82 Å and C—H = 0.93–0.97 Å, and refined using a riding model, with Uiso(H) = 1.5Ueq(C,O) for methyl and hydroxy H or 1.2Ueq(C,N) for other H atoms.

Computing details top

For both compounds, data collection: APEX2 (Bruker, 2010); cell refinement: SAINT (Bruker, 2010); data reduction: SAINT (Bruker, 2010); program(s) used to solve structure: SIR2004 (Burla et al., 2005); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).

Figures top
[Figure 1] Fig. 1. The molecular structure of (I), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. [Symmetry codes: (a) -x - 1, -y, -z; (b) -x + 1, -y + 1, -z.]
[Figure 2] Fig. 2. The asymmetric unit of (II), showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level.
[Figure 3] Fig. 3. The hydrogen bonding (dashed lines) in the crystal structure of (I). Symmetry transformations correspond to those in Table 2. ππ interactions between the pyridine rings are also shown as dashed lines. The ethyl groups have been omitted for clarity.
[Figure 4] Fig. 4. The hydrogen bonding (dashed lines) in the crystal structure of (II). Symmetry transformations correspond to those in Table 4.
[Figure 5] Fig. 5. ππ interactions (dashed lines) between the pyridine rings in the crystal structure of (II), forming cationic dimers. The ethyl groups of the cations and the succinate anions have been omitted for clarity.
[Figure 6] Fig. 6. The crystal packing in (II), viewed along the c axis. Dashed lines show hydrogen bonds.
(I) bis(2-ethyl-6-methyl-3-hydroxypyridinium) succinate–succinic acid (1/1) top
Crystal data top
C8H12NO+·0.5C4H4O42·0.5C4H6O4Z = 2
Mr = 255.27F(000) = 272
Triclinic, P1Dx = 1.284 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.3047 (6) ÅCell parameters from 2735 reflections
b = 8.4660 (7) Åθ = 2.6–28.3°
c = 11.7559 (10) ŵ = 0.10 mm1
α = 95.747 (1)°T = 296 K
β = 103.926 (1)°Prism, colourless
γ = 107.716 (1)°0.40 × 0.20 × 0.15 mm
V = 660.25 (10) Å3
Data collection top
Bruker APEXII CCD area-detector
diffractometer
2717 independent reflections
Radiation source: fine-focus sealed tube2189 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.014
ϕ and ω scansθmax = 26.5°, θmin = 2.6°
Absorption correction: multi-scan
(SADABS; Bruker, 2008)
h = 99
Tmin = 0.961, Tmax = 0.985k = 1010
6220 measured reflectionsl = 1414
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0665P)2 + 0.161P]
where P = (Fo2 + 2Fc2)/3
2717 reflections(Δ/σ)max < 0.001
167 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = 0.24 e Å3
Crystal data top
C8H12NO+·0.5C4H4O42·0.5C4H6O4γ = 107.716 (1)°
Mr = 255.27V = 660.25 (10) Å3
Triclinic, P1Z = 2
a = 7.3047 (6) ÅMo Kα radiation
b = 8.4660 (7) ŵ = 0.10 mm1
c = 11.7559 (10) ÅT = 296 K
α = 95.747 (1)°0.40 × 0.20 × 0.15 mm
β = 103.926 (1)°
Data collection top
Bruker APEXII CCD area-detector
diffractometer
2717 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2008)
2189 reflections with I > 2σ(I)
Tmin = 0.961, Tmax = 0.985Rint = 0.014
6220 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0450 restraints
wR(F2) = 0.128H-atom parameters constrained
S = 1.03Δρmax = 0.28 e Å3
2717 reflectionsΔρmin = 0.24 e Å3
167 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.14960 (17)0.42043 (15)0.37481 (10)0.0384 (3)
H10.09120.37330.30120.046*
C20.16956 (19)0.58313 (18)0.40600 (12)0.0346 (3)
C30.2574 (2)0.65950 (19)0.52588 (12)0.0372 (3)
O30.26961 (18)0.82004 (14)0.55682 (9)0.0498 (3)
H30.29800.84520.62960.075*
C40.3273 (2)0.5662 (2)0.60597 (13)0.0449 (4)
H40.38880.61570.68600.054*
C50.3060 (2)0.4013 (2)0.56741 (15)0.0477 (4)
H50.35440.34040.62160.057*
C60.2138 (2)0.3249 (2)0.44960 (15)0.0441 (4)
C70.1032 (2)0.6755 (2)0.31137 (13)0.0422 (4)
H7A0.03260.74400.34000.051*
H7B0.01050.59450.24150.051*
C80.2791 (3)0.7883 (2)0.27663 (16)0.0550 (4)
H8A0.37470.86460.34640.082*
H8B0.23180.85160.22010.082*
H8C0.34180.71990.24150.082*
C90.1797 (3)0.1469 (2)0.3983 (2)0.0670 (5)
H9A0.03820.08620.36840.100*
H9B0.23890.09490.45920.100*
H9C0.24000.14470.33440.100*
C100.7209 (2)0.1343 (2)0.13892 (13)0.0439 (4)
O1010.88897 (18)0.24738 (16)0.15792 (10)0.0618 (4)
O1020.6442 (2)0.08687 (18)0.21770 (10)0.0704 (4)
C110.6081 (2)0.0530 (2)0.01004 (13)0.0506 (4)
H11A0.61280.14120.03710.061*
H11B0.67630.01730.01890.061*
C120.2711 (2)0.3927 (2)0.05304 (14)0.0498 (4)
O1210.0812 (2)0.3133 (2)0.00103 (12)0.0906 (6)
H1210.02000.29220.04870.136*
O1220.33909 (19)0.4171 (2)0.15904 (11)0.0766 (5)
C130.3903 (2)0.4524 (3)0.03110 (15)0.0582 (5)
H13A0.33380.52510.07580.070*
H13B0.37880.35560.08760.070*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0359 (6)0.0425 (7)0.0299 (6)0.0063 (5)0.0072 (5)0.0042 (5)
C20.0286 (6)0.0409 (8)0.0285 (7)0.0039 (5)0.0076 (5)0.0066 (5)
C30.0312 (7)0.0454 (8)0.0274 (7)0.0029 (6)0.0075 (5)0.0068 (6)
O30.0613 (7)0.0467 (6)0.0292 (5)0.0071 (5)0.0079 (5)0.0006 (4)
C40.0346 (7)0.0654 (10)0.0280 (7)0.0093 (7)0.0050 (6)0.0124 (7)
C50.0385 (8)0.0649 (11)0.0445 (9)0.0193 (7)0.0116 (6)0.0262 (8)
C60.0377 (7)0.0478 (9)0.0501 (9)0.0142 (6)0.0162 (7)0.0162 (7)
C70.0441 (8)0.0454 (8)0.0293 (7)0.0099 (6)0.0033 (6)0.0075 (6)
C80.0660 (11)0.0588 (10)0.0465 (9)0.0193 (9)0.0251 (8)0.0220 (8)
C90.0682 (12)0.0523 (11)0.0832 (14)0.0235 (9)0.0218 (11)0.0154 (10)
C100.0417 (8)0.0462 (8)0.0293 (7)0.0007 (6)0.0080 (6)0.0033 (6)
O1010.0458 (7)0.0700 (8)0.0377 (6)0.0152 (6)0.0050 (5)0.0046 (5)
O1020.0657 (8)0.0830 (9)0.0285 (6)0.0174 (7)0.0142 (5)0.0073 (6)
C110.0428 (9)0.0586 (10)0.0296 (7)0.0074 (7)0.0099 (6)0.0049 (7)
C120.0432 (8)0.0590 (10)0.0368 (8)0.0101 (7)0.0033 (6)0.0058 (7)
O1210.0473 (7)0.1430 (15)0.0401 (7)0.0157 (8)0.0040 (6)0.0067 (8)
O1220.0505 (7)0.1230 (13)0.0389 (7)0.0111 (8)0.0039 (6)0.0187 (7)
C130.0441 (9)0.0788 (13)0.0378 (8)0.0068 (9)0.0047 (7)0.0109 (8)
Geometric parameters (Å, º) top
N1—C21.3431 (19)C8—H8C0.9600
N1—C61.350 (2)C9—H9A0.9600
N1—H10.8600C9—H9B0.9600
C2—C31.3948 (19)C9—H9C0.9600
C2—C71.493 (2)C10—O1021.2327 (19)
C3—O31.3413 (19)C10—O1011.2587 (18)
C3—C41.391 (2)C10—C111.5142 (19)
O3—H30.8200C11—C11i1.507 (3)
C4—C51.374 (2)C11—H11A0.9700
C4—H40.9300C11—H11B0.9700
C5—C61.377 (2)C12—O1221.196 (2)
C5—H50.9300C12—O1211.305 (2)
C6—C91.488 (3)C12—C131.497 (2)
C7—C81.521 (2)O121—H1210.8200
C7—H7A0.9700C13—C13ii1.511 (3)
C7—H7B0.9700C13—H13A0.9700
C8—H8A0.9600C13—H13B0.9700
C8—H8B0.9600
C2—N1—C6125.30 (13)C7—C8—H8C109.5
C2—N1—H1117.3H8A—C8—H8C109.5
C6—N1—H1117.3H8B—C8—H8C109.5
N1—C2—C3117.99 (13)C6—C9—H9A109.5
N1—C2—C7119.05 (12)C6—C9—H9B109.5
C3—C2—C7122.93 (13)H9A—C9—H9B109.5
O3—C3—C4123.86 (13)C6—C9—H9C109.5
O3—C3—C2117.51 (13)H9A—C9—H9C109.5
C4—C3—C2118.64 (14)H9B—C9—H9C109.5
C3—O3—H3109.5O102—C10—O101124.34 (14)
C5—C4—C3120.26 (14)O102—C10—C11118.87 (13)
C5—C4—H4119.9O101—C10—C11116.79 (13)
C3—C4—H4119.9C11i—C11—C10114.49 (16)
C4—C5—C6120.86 (14)C11i—C11—H11A108.6
C4—C5—H5119.6C10—C11—H11A108.6
C6—C5—H5119.6C11i—C11—H11B108.6
N1—C6—C5116.89 (15)C10—C11—H11B108.6
N1—C6—C9117.60 (16)H11A—C11—H11B107.6
C5—C6—C9125.51 (16)O122—C12—O121122.67 (16)
C2—C7—C8111.91 (13)O122—C12—C13124.44 (15)
C2—C7—H7A109.2O121—C12—C13112.87 (14)
C8—C7—H7A109.2C12—O121—H121109.5
C2—C7—H7B109.2C12—C13—C13ii113.19 (17)
C8—C7—H7B109.2C12—C13—H13A108.9
H7A—C7—H7B107.9C13ii—C13—H13A108.9
C7—C8—H8A109.5C12—C13—H13B108.9
C7—C8—H8B109.5C13ii—C13—H13B108.9
H8A—C8—H8B109.5H13A—C13—H13B107.8
C6—N1—C2—C32.3 (2)C2—N1—C6—C9179.50 (14)
C6—N1—C2—C7175.89 (13)C4—C5—C6—N11.1 (2)
N1—C2—C3—O3177.50 (12)C4—C5—C6—C9179.01 (15)
C7—C2—C3—O34.4 (2)N1—C2—C7—C8101.27 (16)
N1—C2—C3—C42.68 (19)C3—C2—C7—C876.84 (18)
C7—C2—C3—C4175.44 (13)O102—C10—C11—C11i12.4 (3)
O3—C3—C4—C5178.88 (13)O101—C10—C11—C11i167.5 (2)
C2—C3—C4—C51.3 (2)O122—C12—C13—C13ii0.3 (4)
C3—C4—C5—C60.6 (2)O121—C12—C13—C13ii178.8 (2)
C2—N1—C6—C50.4 (2)
Symmetry codes: (i) x+1, y, z; (ii) x+1, y+1, z.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O101iii0.861.912.7367 (16)161
O3—H3···O102iv0.821.742.5534 (15)176
O121—H121···O101iii0.821.782.6020 (18)180
C4—H4···O122iv0.932.463.1719 (19)134
Symmetry codes: (iii) x1, y, z; (iv) x+1, y+1, z+1.
(II) 2-ethyl-6-methyl-3-hydroxypyridinium 3-carboxypropionate top
Crystal data top
C8H12NO+·C4H5O4F(000) = 544
Mr = 255.27Dx = 1.288 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6600 reflections
a = 11.4951 (2) Åθ = 2.4–29.9°
b = 12.4787 (2) ŵ = 0.10 mm1
c = 9.1986 (1) ÅT = 296 K
β = 93.886 (1)°Prism, colourless
V = 1316.45 (3) Å30.50 × 0.15 × 0.15 mm
Z = 4
Data collection top
Bruker APEXII CCD area-detector
diffractometer
2733 independent reflections
Radiation source: fine-focus sealed tube2226 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.020
ϕ and ω scansθmax = 26.5°, θmin = 1.8°
Absorption correction: multi-scan
(SADABS; Bruker, 2008)
h = 1414
Tmin = 0.952, Tmax = 0.985k = 1513
12765 measured reflectionsl = 119
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0728P)2 + 0.4496P]
where P = (Fo2 + 2Fc2)/3
2733 reflections(Δ/σ)max = 0.001
167 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = 0.24 e Å3
Crystal data top
C8H12NO+·C4H5O4V = 1316.45 (3) Å3
Mr = 255.27Z = 4
Monoclinic, P21/cMo Kα radiation
a = 11.4951 (2) ŵ = 0.10 mm1
b = 12.4787 (2) ÅT = 296 K
c = 9.1986 (1) Å0.50 × 0.15 × 0.15 mm
β = 93.886 (1)°
Data collection top
Bruker APEXII CCD area-detector
diffractometer
2733 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2008)
2226 reflections with I > 2σ(I)
Tmin = 0.952, Tmax = 0.985Rint = 0.020
12765 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0470 restraints
wR(F2) = 0.141H-atom parameters constrained
S = 1.03Δρmax = 0.28 e Å3
2733 reflectionsΔρmin = 0.24 e Å3
167 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.66493 (11)0.06511 (11)0.66318 (14)0.0410 (3)
H10.73680.04790.68240.049*
C20.64131 (13)0.13587 (13)0.55524 (17)0.0412 (4)
C30.52507 (13)0.16437 (13)0.52291 (17)0.0390 (4)
O30.50401 (10)0.23467 (11)0.41467 (14)0.0547 (4)
H30.43430.24900.40710.082*
C40.44045 (13)0.11887 (13)0.60292 (18)0.0410 (4)
H40.36260.13710.58290.049*
C50.47068 (14)0.04696 (13)0.71169 (18)0.0427 (4)
H50.41290.01670.76460.051*
C60.58527 (14)0.01897 (13)0.74378 (17)0.0406 (4)
C70.73940 (15)0.18238 (18)0.4772 (2)0.0606 (5)
H7A0.71410.19250.37530.073*
H7B0.80400.13220.48200.073*
C80.7806 (2)0.2884 (2)0.5412 (3)0.0891 (8)
H8A0.71510.33530.54840.134*
H8B0.83500.32040.47940.134*
H8C0.81800.27690.63640.134*
C90.62727 (18)0.05805 (16)0.8593 (2)0.0579 (5)
H9A0.65350.12250.81490.087*
H9B0.56480.07470.91970.087*
H9C0.69070.02660.91780.087*
C101.20083 (12)0.24473 (13)0.86375 (18)0.0408 (4)
O1011.29504 (9)0.19678 (9)0.86634 (14)0.0484 (3)
O1021.19101 (10)0.34224 (9)0.89723 (16)0.0571 (4)
C111.09050 (15)0.18459 (15)0.8192 (3)0.0726 (7)
H11A1.04330.18130.90250.087*
H11B1.04730.22570.74410.087*
C121.10454 (14)0.07488 (15)0.7645 (3)0.0611 (6)
H12A1.14860.03330.83840.073*
H12B1.14950.07750.67910.073*
C130.99071 (13)0.01871 (13)0.7251 (2)0.0485 (4)
O1311.00185 (11)0.07147 (11)0.6597 (2)0.0748 (5)
H1310.93730.09780.64060.112*
O1320.89791 (10)0.05696 (11)0.75272 (18)0.0654 (4)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0271 (6)0.0491 (8)0.0461 (7)0.0078 (5)0.0034 (5)0.0010 (6)
C20.0306 (7)0.0498 (9)0.0429 (8)0.0057 (6)0.0018 (6)0.0011 (7)
C30.0324 (7)0.0415 (8)0.0424 (8)0.0059 (6)0.0020 (6)0.0016 (7)
O30.0357 (6)0.0660 (8)0.0620 (8)0.0104 (6)0.0005 (5)0.0189 (6)
C40.0266 (7)0.0449 (9)0.0513 (9)0.0049 (6)0.0002 (6)0.0050 (7)
C50.0347 (8)0.0438 (9)0.0500 (9)0.0011 (6)0.0051 (6)0.0025 (7)
C60.0391 (8)0.0406 (8)0.0417 (8)0.0027 (6)0.0003 (6)0.0036 (7)
C70.0357 (9)0.0881 (15)0.0589 (11)0.0082 (9)0.0108 (8)0.0149 (10)
C80.0697 (15)0.0845 (17)0.116 (2)0.0226 (13)0.0268 (14)0.0199 (16)
C90.0583 (11)0.0596 (12)0.0551 (11)0.0089 (9)0.0028 (8)0.0100 (9)
C100.0281 (7)0.0372 (8)0.0561 (9)0.0002 (6)0.0044 (6)0.0032 (7)
O1010.0278 (5)0.0432 (7)0.0730 (8)0.0021 (5)0.0065 (5)0.0072 (6)
O1020.0361 (6)0.0358 (6)0.0968 (10)0.0031 (5)0.0136 (6)0.0049 (6)
C110.0297 (9)0.0487 (11)0.137 (2)0.0018 (8)0.0076 (10)0.0228 (12)
C120.0287 (8)0.0462 (10)0.1072 (17)0.0027 (7)0.0049 (9)0.0119 (10)
C130.0284 (8)0.0381 (9)0.0775 (12)0.0003 (6)0.0071 (7)0.0001 (8)
O1310.0349 (7)0.0441 (8)0.1447 (15)0.0047 (5)0.0001 (8)0.0253 (8)
O1320.0279 (6)0.0638 (9)0.1031 (11)0.0001 (5)0.0060 (6)0.0251 (8)
Geometric parameters (Å, º) top
N1—C21.343 (2)C8—H8B0.9600
N1—C61.346 (2)C8—H8C0.9600
N1—H10.8600C9—H9A0.9600
C2—C31.395 (2)C9—H9B0.9600
C2—C71.495 (2)C9—H9C0.9600
C3—O31.337 (2)C10—O1011.2360 (18)
C3—C41.381 (2)C10—O1021.262 (2)
O3—H30.8200C10—C111.506 (2)
C4—C51.371 (2)C11—C121.471 (3)
C4—H40.9300C11—H11A0.9700
C5—C61.375 (2)C11—H11B0.9700
C5—H50.9300C12—C131.507 (2)
C6—C91.489 (2)C12—H12A0.9700
C7—C81.512 (3)C12—H12B0.9700
C7—H7A0.9700C13—O1321.211 (2)
C7—H7B0.9700C13—O1311.287 (2)
C8—H8A0.9600O131—H1310.8200
C2—N1—C6125.29 (13)C7—C8—H8C109.5
C2—N1—H1117.4H8A—C8—H8C109.5
C6—N1—H1117.4H8B—C8—H8C109.5
N1—C2—C3117.90 (14)C6—C9—H9A109.5
N1—C2—C7119.30 (14)C6—C9—H9B109.5
C3—C2—C7122.79 (16)H9A—C9—H9B109.5
O3—C3—C4124.62 (13)C6—C9—H9C109.5
O3—C3—C2116.65 (14)H9A—C9—H9C109.5
C4—C3—C2118.73 (15)H9B—C9—H9C109.5
C3—O3—H3109.5O101—C10—O102123.69 (14)
C5—C4—C3120.33 (14)O101—C10—C11118.97 (15)
C5—C4—H4119.8O102—C10—C11117.33 (14)
C3—C4—H4119.8C12—C11—C10116.54 (15)
C4—C5—C6120.97 (15)C12—C11—H11A108.2
C4—C5—H5119.5C10—C11—H11A108.2
C6—C5—H5119.5C12—C11—H11B108.2
N1—C6—C5116.78 (15)C10—C11—H11B108.2
N1—C6—C9118.00 (14)H11A—C11—H11B107.3
C5—C6—C9125.22 (16)C11—C12—C13113.68 (15)
C2—C7—C8112.30 (17)C11—C12—H12A108.8
C2—C7—H7A109.1C13—C12—H12A108.8
C8—C7—H7A109.1C11—C12—H12B108.8
C2—C7—H7B109.1C13—C12—H12B108.8
C8—C7—H7B109.1H12A—C12—H12B107.7
H7A—C7—H7B107.9O132—C13—O131124.03 (15)
C7—C8—H8A109.5O132—C13—C12121.94 (16)
C7—C8—H8B109.5O131—C13—C12114.02 (15)
H8A—C8—H8B109.5C13—O131—H131109.5
C6—N1—C2—C30.1 (2)C2—N1—C6—C9179.95 (16)
C6—N1—C2—C7178.66 (16)C4—C5—C6—N10.3 (2)
N1—C2—C3—O3179.78 (14)C4—C5—C6—C9180.00 (16)
C7—C2—C3—O31.5 (3)N1—C2—C7—C894.2 (2)
N1—C2—C3—C40.1 (2)C3—C2—C7—C884.5 (2)
C7—C2—C3—C4178.65 (16)O101—C10—C11—C127.1 (3)
O3—C3—C4—C5179.69 (16)O102—C10—C11—C12173.2 (2)
C2—C3—C4—C50.1 (2)C10—C11—C12—C13178.72 (19)
C3—C4—C5—C60.2 (2)C11—C12—C13—O1328.1 (3)
C2—N1—C6—C50.2 (2)C11—C12—C13—O131171.4 (2)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O1320.861.922.7499 (17)161
O3—H3···O101i0.821.752.5603 (15)167
O131—H131···O102ii0.821.672.4882 (16)177
C4—H4···O102i0.932.533.3617 (19)149
Symmetry codes: (i) x1, y+1/2, z1/2; (ii) x+2, y1/2, z+3/2.

Experimental details

(I)(II)
Crystal data
Chemical formulaC8H12NO+·0.5C4H4O42·0.5C4H6O4C8H12NO+·C4H5O4
Mr255.27255.27
Crystal system, space groupTriclinic, P1Monoclinic, P21/c
Temperature (K)296296
a, b, c (Å)7.3047 (6), 8.4660 (7), 11.7559 (10)11.4951 (2), 12.4787 (2), 9.1986 (1)
α, β, γ (°)95.747 (1), 103.926 (1), 107.716 (1)90, 93.886 (1), 90
V3)660.25 (10)1316.45 (3)
Z24
Radiation typeMo KαMo Kα
µ (mm1)0.100.10
Crystal size (mm)0.40 × 0.20 × 0.150.50 × 0.15 × 0.15
Data collection
DiffractometerBruker APEXII CCD area-detector
diffractometer
Bruker APEXII CCD area-detector
diffractometer
Absorption correctionMulti-scan
(SADABS; Bruker, 2008)
Multi-scan
(SADABS; Bruker, 2008)
Tmin, Tmax0.961, 0.9850.952, 0.985
No. of measured, independent and
observed [I > 2σ(I)] reflections
6220, 2717, 2189 12765, 2733, 2226
Rint0.0140.020
(sin θ/λ)max1)0.6280.628
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.045, 0.128, 1.03 0.047, 0.141, 1.03
No. of reflections27172733
No. of parameters167167
H-atom treatmentH-atom parameters constrainedH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.28, 0.240.28, 0.24

Computer programs: APEX2 (Bruker, 2010), SAINT (Bruker, 2010), SIR2004 (Burla et al., 2005), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).

Selected bond lengths (Å) for (I) top
N1—C21.3431 (19)C7—C81.521 (2)
N1—C61.350 (2)C10—O1021.2327 (19)
N1—H10.8600C10—O1011.2587 (18)
C2—C31.3948 (19)C10—C111.5142 (19)
C2—C71.493 (2)C11—C11i1.507 (3)
C3—O31.3413 (19)C12—O1221.196 (2)
C3—C41.391 (2)C12—O1211.305 (2)
C4—C51.374 (2)C12—C131.497 (2)
C5—C61.377 (2)C13—C13ii1.511 (3)
C6—C91.488 (3)
Symmetry codes: (i) x+1, y, z; (ii) x+1, y+1, z.
Hydrogen-bond geometry (Å, º) for (I) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O101iii0.861.912.7367 (16)161
O3—H3···O102iv0.821.742.5534 (15)176
O121—H121···O101iii0.821.782.6020 (18)180
C4—H4···O122iv0.932.463.1719 (19)134
Symmetry codes: (iii) x1, y, z; (iv) x+1, y+1, z+1.
Selected bond lengths (Å) for (II) top
N1—C21.343 (2)C7—C81.512 (3)
N1—C61.346 (2)C10—O1011.2360 (18)
C2—C31.395 (2)C10—O1021.262 (2)
C2—C71.495 (2)C10—C111.506 (2)
C3—O31.337 (2)C11—C121.471 (3)
C3—C41.381 (2)C12—C131.507 (2)
C4—C51.371 (2)C13—O1321.211 (2)
C5—C61.375 (2)C13—O1311.287 (2)
C6—C91.489 (2)
Hydrogen-bond geometry (Å, º) for (II) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O1320.861.922.7499 (17)161
O3—H3···O101i0.821.752.5603 (15)167
O131—H131···O102ii0.821.672.4882 (16)177
C4—H4···O102i0.932.533.3617 (19)149
Symmetry codes: (i) x1, y+1/2, z1/2; (ii) x+2, y1/2, z+3/2.
 

Follow Acta Cryst. C
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds