Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536801014891/wn6048sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536801014891/wn6048Isup2.hkl |
CCDC reference: 175362
The sample (98%) was obtained from the Aldrich Company and used without further purification. The crystal was grown with difficulty in a 0.3 mm glass capillary tube, obtained from the PANTAK company (PANTAK Company, Unit 30, The Robert Corl Industrial Estate, Britten Road, Reading, England), at 245 K (a temperature only slightly less than the melting point of the solid in the capillary tube). With the axis of the capillary parallel to the phi axis and horizontal on the instrument, the crystal was eventually grown by moving a plug of solid material up and down the tube (the movement being controlled with the standard Z (height) adjustment of the goniometer head). The goniometer head was a Nonius model 1516.916 X—Y—Z (Nonius BV, Delft, The Netherlands); this head is particularly well suited to the experiment described in this paper since it has an especially wide Z translation (8 mm). This method is effectively zone refinement, similar to the industrial methods used to grow large single crystals of silicon for the electronics industry. The fine temperature control necessary for the successful growth of the crystal was provided by an Oxford Cryosystems Cryostream (Oxford Cryosystems, Lower Road, Long Hanborough, Oxford, England).
The positions of all H atoms were allowed to refine independently. Pairs of chemically equivalent H atoms in the two independent molecules were assigned common, isotropic displacement parameters (7 variables in total).
Data collection: COLLECT (Nonius, 1998); cell refinement: HKL SCALEPACK (Otwinowski & Minor, 1997); data reduction: HKL DENZO (Otwinowski & Minor, 1997) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); software used to prepare material for publication: SHELXL97.
C9H7N | Dx = 1.244 Mg m−3 |
Mr = 129.16 | Melting point = 257–258 K |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.7107 Å |
a = 9.9226 (5) Å | Cell parameters from 6740 reflections |
b = 10.8473 (7) Å | θ = 1.0–27.5° |
c = 13.3665 (7) Å | µ = 0.07 mm−1 |
β = 106.578 (3)° | T = 150 K |
V = 1378.88 (13) Å3 | Cylinder, colourless |
Z = 8 | 0.26 mm (radius) |
F(000) = 544 |
Nonius KappaCCD diffractometer | Rint = 0.018 |
Radiation source: fine-focus sealed tube | θmax = 27.4°, θmin = 3.6° |
Thin–slice ω and ϕ scans | h = −12→12 |
4851 measured reflections | k = −12→14 |
3055 independent reflections | l = −17→17 |
2337 reflections with I > 2σ(I) |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.124 | All H-atom parameters refined |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0556P)2 + 0.2728P] where P = (Fo2 + 2Fc2)/3 |
3055 reflections | (Δ/σ)max = 0.002 |
230 parameters | Δρmax = 0.18 e Å−3 |
0 restraints | Δρmin = −0.18 e Å−3 |
C9H7N | V = 1378.88 (13) Å3 |
Mr = 129.16 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.9226 (5) Å | µ = 0.07 mm−1 |
b = 10.8473 (7) Å | T = 150 K |
c = 13.3665 (7) Å | 0.26 mm (radius) |
β = 106.578 (3)° |
Nonius KappaCCD diffractometer | 2337 reflections with I > 2σ(I) |
4851 measured reflections | Rint = 0.018 |
3055 independent reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.124 | All H-atom parameters refined |
S = 1.04 | Δρmax = 0.18 e Å−3 |
3055 reflections | Δρmin = −0.18 e Å−3 |
230 parameters |
Experimental. Grown in a 0.30 mm glass capillary tube at 245 K |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1A | 0.65225 (13) | 0.07533 (12) | 0.23904 (9) | 0.0452 (3) | |
C2A | 0.54448 (17) | −0.00110 (16) | 0.21851 (13) | 0.0549 (4) | |
H2A | 0.531 (2) | −0.0560 (18) | 0.1551 (15) | 0.071 (4)* | |
C3A | 0.45114 (17) | −0.01252 (16) | 0.27924 (15) | 0.0582 (5) | |
H3A | 0.375 (2) | −0.0737 (17) | 0.2596 (13) | 0.064 (4)* | |
C4A | 0.47055 (15) | 0.05872 (15) | 0.36503 (14) | 0.0499 (4) | |
H4A | 0.4112 (18) | 0.0555 (15) | 0.4118 (12) | 0.052 (3)* | |
C5A | 0.61552 (18) | 0.21815 (14) | 0.48250 (12) | 0.0466 (4) | |
H5A | 0.5547 (17) | 0.2137 (15) | 0.5255 (13) | 0.053 (3)* | |
C6A | 0.7300 (2) | 0.29307 (14) | 0.50649 (13) | 0.0521 (4) | |
H6A | 0.7558 (19) | 0.3422 (17) | 0.5694 (14) | 0.063 (4)* | |
C7A | 0.81915 (18) | 0.29743 (13) | 0.44123 (13) | 0.0492 (4) | |
H7A | 0.9067 (19) | 0.3531 (17) | 0.4611 (13) | 0.063 (4)* | |
C8A | 0.79123 (15) | 0.22698 (13) | 0.35304 (12) | 0.0415 (3) | |
H8A | 0.8508 (18) | 0.2290 (15) | 0.3062 (13) | 0.057 (3)* | |
C9A | 0.67380 (13) | 0.14730 (12) | 0.32681 (10) | 0.0346 (3) | |
C10A | 0.58453 (14) | 0.14235 (12) | 0.39252 (10) | 0.0373 (3) | |
N1B | 0.89070 (14) | −0.18868 (13) | 0.73237 (9) | 0.0483 (3) | |
C2B | 0.93813 (17) | −0.07581 (17) | 0.75730 (12) | 0.0531 (4) | |
H2B | 0.974 (2) | −0.0584 (17) | 0.8338 (15) | 0.071 (4)* | |
C3B | 0.93974 (15) | 0.01761 (15) | 0.68472 (12) | 0.0473 (4) | |
H3B | 0.9746 (19) | 0.0981 (18) | 0.7078 (13) | 0.064 (4)* | |
C4B | 0.89030 (14) | −0.00839 (12) | 0.58122 (11) | 0.0372 (3) | |
H4B | 0.8869 (17) | 0.0548 (15) | 0.5285 (12) | 0.052 (3)* | |
C5B | 0.78315 (14) | −0.16227 (13) | 0.44397 (10) | 0.0380 (3) | |
H5B | 0.7828 (17) | −0.1016 (15) | 0.3884 (12) | 0.053 (3)* | |
C6B | 0.72953 (16) | −0.27704 (14) | 0.41768 (12) | 0.0471 (4) | |
H6B | 0.6889 (18) | −0.3002 (16) | 0.3406 (14) | 0.063 (4)* | |
C7B | 0.72999 (17) | −0.36330 (14) | 0.49616 (14) | 0.0511 (4) | |
H7B | 0.6901 (18) | −0.4468 (18) | 0.4770 (13) | 0.063 (4)* | |
C8B | 0.78385 (15) | −0.33428 (13) | 0.59868 (13) | 0.0456 (4) | |
H8B | 0.7839 (18) | −0.3935 (16) | 0.6560 (13) | 0.057 (3)* | |
C9B | 0.83913 (13) | −0.21504 (12) | 0.62842 (10) | 0.0343 (3) | |
C10B | 0.83788 (12) | −0.12738 (11) | 0.54945 (9) | 0.0305 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1A | 0.0450 (7) | 0.0494 (7) | 0.0385 (6) | 0.0108 (6) | 0.0074 (5) | −0.0014 (5) |
C2A | 0.0465 (9) | 0.0527 (9) | 0.0531 (9) | 0.0092 (8) | −0.0060 (7) | −0.0065 (7) |
C3A | 0.0347 (8) | 0.0469 (9) | 0.0820 (13) | 0.0006 (7) | −0.0012 (8) | 0.0064 (8) |
C4A | 0.0323 (7) | 0.0479 (9) | 0.0720 (11) | 0.0100 (6) | 0.0189 (7) | 0.0192 (8) |
C5A | 0.0596 (9) | 0.0416 (8) | 0.0460 (8) | 0.0201 (7) | 0.0270 (7) | 0.0106 (6) |
C6A | 0.0773 (11) | 0.0329 (7) | 0.0430 (8) | 0.0139 (8) | 0.0122 (8) | 0.0001 (6) |
C7A | 0.0552 (9) | 0.0322 (7) | 0.0554 (9) | −0.0023 (7) | 0.0079 (7) | 0.0048 (6) |
C8A | 0.0404 (8) | 0.0386 (7) | 0.0483 (8) | 0.0040 (6) | 0.0169 (6) | 0.0096 (6) |
C9A | 0.0339 (7) | 0.0338 (7) | 0.0369 (7) | 0.0090 (5) | 0.0115 (5) | 0.0065 (5) |
C10A | 0.0360 (7) | 0.0347 (7) | 0.0435 (7) | 0.0127 (5) | 0.0154 (6) | 0.0118 (6) |
N1B | 0.0489 (7) | 0.0591 (8) | 0.0378 (6) | 0.0067 (6) | 0.0137 (5) | 0.0083 (6) |
C2B | 0.0507 (9) | 0.0698 (11) | 0.0361 (8) | 0.0105 (8) | 0.0078 (6) | −0.0066 (7) |
C3B | 0.0426 (8) | 0.0413 (8) | 0.0558 (9) | 0.0019 (6) | 0.0103 (7) | −0.0126 (7) |
C4B | 0.0339 (7) | 0.0319 (7) | 0.0470 (8) | 0.0036 (5) | 0.0138 (6) | 0.0031 (6) |
C5B | 0.0392 (7) | 0.0401 (7) | 0.0365 (7) | 0.0032 (6) | 0.0137 (6) | 0.0036 (6) |
C6B | 0.0476 (8) | 0.0463 (8) | 0.0462 (9) | 0.0012 (7) | 0.0117 (7) | −0.0083 (7) |
C7B | 0.0464 (8) | 0.0328 (7) | 0.0700 (11) | −0.0008 (7) | 0.0098 (7) | −0.0016 (7) |
C8B | 0.0399 (8) | 0.0355 (7) | 0.0614 (9) | 0.0015 (6) | 0.0144 (7) | 0.0172 (7) |
C9B | 0.0297 (6) | 0.0369 (7) | 0.0380 (7) | 0.0069 (5) | 0.0123 (5) | 0.0093 (5) |
C10B | 0.0277 (6) | 0.0297 (6) | 0.0365 (6) | 0.0049 (5) | 0.0132 (5) | 0.0037 (5) |
N1A—C2A | 1.319 (2) | N1B—C2B | 1.320 (2) |
N1A—C9A | 1.3742 (17) | N1B—C9B | 1.3670 (18) |
C2A—C3A | 1.400 (3) | C2B—C3B | 1.406 (2) |
C2A—H2A | 1.01 (2) | C2B—H2B | 1.00 (2) |
C3A—C4A | 1.350 (3) | C3B—C4B | 1.359 (2) |
C3A—H3A | 0.98 (2) | C3B—H3B | 0.96 (2) |
C4A—C10A | 1.414 (2) | C4B—C10B | 1.4109 (18) |
C4A—H4A | 0.97 (2) | C4B—H4B | 0.98 (2) |
C5A—C6A | 1.358 (2) | C5B—C6B | 1.360 (2) |
C5A—C10A | 1.416 (2) | C5B—C10B | 1.4103 (18) |
C5A—H5A | 0.95 (2) | C5B—H5B | 0.99 (2) |
C6A—C7A | 1.410 (2) | C6B—C7B | 1.405 (2) |
C6A—H6A | 0.97 (2) | C6B—H6B | 1.02 (2) |
C7A—C8A | 1.365 (2) | C7B—C8B | 1.358 (2) |
C7A—H7A | 1.03 (2) | C7B—H7B | 0.99 (2) |
C8A—C9A | 1.412 (2) | C8B—C9B | 1.417 (2) |
C8A—H8A | 0.98 (2) | C8B—H8B | 1.00 (2) |
C9A—C10A | 1.4152 (18) | C9B—C10B | 1.4181 (17) |
C2A—N1A—C9A | 117.02 (13) | C2B—N1B—C9B | 116.98 (13) |
N1A—C2A—C3A | 124.48 (16) | N1B—C2B—C3B | 124.60 (14) |
N1A—C2A—H2A | 116.6 (11) | N1B—C2B—H2B | 115.5 (11) |
C3A—C2A—H2A | 118.9 (11) | C3B—C2B—H2B | 119.9 (11) |
C4A—C3A—C2A | 118.95 (16) | C4B—C3B—C2B | 118.74 (14) |
C4A—C3A—H3A | 121.7 (10) | C4B—C3B—H3B | 120.7 (10) |
C2A—C3A—H3A | 119.4 (10) | C2B—C3B—H3B | 120.6 (10) |
C3A—C4A—C10A | 119.83 (15) | C3B—C4B—C10B | 119.43 (13) |
C3A—C4A—H4A | 124.0 (10) | C3B—C4B—H4B | 121.1 (9) |
C10A—C4A—H4A | 116.2 (10) | C10B—C4B—H4B | 119.4 (9) |
C6A—C5A—C10A | 120.80 (14) | C6B—C5B—C10B | 120.97 (13) |
C6A—C5A—H5A | 121.5 (10) | C6B—C5B—H5B | 119.7 (9) |
C10A—C5A—H5A | 117.7 (10) | C10B—C5B—H5B | 119.3 (9) |
C5A—C6A—C7A | 120.28 (15) | C5B—C6B—C7B | 119.94 (14) |
C5A—C6A—H6A | 122.1 (11) | C5B—C6B—H6B | 119.8 (10) |
C7A—C6A—H6A | 117.6 (11) | C7B—C6B—H6B | 120.3 (10) |
C8A—C7A—C6A | 120.47 (15) | C8B—C7B—C6B | 121.04 (14) |
C8A—C7A—H7A | 120.0 (10) | C8B—C7B—H7B | 119.0 (10) |
C6A—C7A—H7A | 119.5 (10) | C6B—C7B—H7B | 119.9 (10) |
C7A—C8A—C9A | 120.44 (14) | C7B—C8B—C9B | 120.26 (13) |
C7A—C8A—H8A | 122.0 (10) | C7B—C8B—H8B | 122.5 (10) |
C9A—C8A—H8A | 117.6 (10) | C9B—C8B—H8B | 117.2 (10) |
N1A—C9A—C8A | 118.42 (12) | N1B—C9B—C8B | 118.61 (12) |
N1A—C9A—C10A | 122.40 (12) | N1B—C9B—C10B | 122.52 (12) |
C8A—C9A—C10A | 119.17 (13) | C8B—C9B—C10B | 118.87 (12) |
C4A—C10A—C9A | 117.32 (13) | C5B—C10B—C4B | 123.38 (12) |
C4A—C10A—C5A | 123.83 (13) | C5B—C10B—C9B | 118.90 (12) |
C9A—C10A—C5A | 118.83 (13) | C4B—C10B—C9B | 117.72 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
C3B—H3B···N1Bi | 0.96 (2) | 2.68 (2) | 3.626 (2) | 171.1 (1) |
C6A—H6A···N1Aii | 0.97 (2) | 2.89 (2) | 3.696 (2) | 141.1 (1) |
Symmetry codes: (i) −x+2, y+1/2, −z+3/2; (ii) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C9H7N |
Mr | 129.16 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 150 |
a, b, c (Å) | 9.9226 (5), 10.8473 (7), 13.3665 (7) |
β (°) | 106.578 (3) |
V (Å3) | 1378.88 (13) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.26 (radius) |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4851, 3055, 2337 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.648 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.124, 1.04 |
No. of reflections | 3055 |
No. of parameters | 230 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.18, −0.18 |
Computer programs: COLLECT (Nonius, 1998), HKL SCALEPACK (Otwinowski & Minor, 1997), HKL DENZO (Otwinowski & Minor, 1997) and SCALEPACK, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXL97.
Although the structure of naphthalene was one of the first determined by X-ray crystallography (Bragg, 1922), this is the first report of the structure of quinoline. This long delay may be attributed to the difficulty of obtaining a suitable single-crystal of quinoline. This work forms part of a study devoted to improving the techniques for determining the crystal structures of substances which are liquids at room temperature [see, for example, Bond et al. (2001)].
Quinoline, (I), crystallizes in the space group P21/c with the asymmetric unit comprising two independent molecules (denoted A and B, Fig. 1). Molecules of type A are linked via C—H···N interactions into chains running parallel to the c direction [H6A···N1Ai = 2.89 (2) Å, C6A—H6A···N1Ai = 141.1 (1)°; symmetry code: (i) x, 0.5 - y, 0.5 + z]. Molecules of type B are also linked via C—H···N interactions into chains running parallel to the b direction [H3B···N1Bii = 2.68 (2) Å, C3B—H3B···N1Bii = 171.1 (1)°; symmetry code: (ii) 2 - x, 0.5 + y, 1.5 - z]. Thus, there exists in (I) two orthogonal sets of C—H···N hydrogen-bonded chains. Between these chains, an extensive network of edge-to-face C—H···π interactions exists (Desiraju & Steiner, 1999). This network may be visualized most conveniently by considering that each edge of a molecule of (I) exposed in a type B chain is `capped' by a molecule of type A, and that these capped chains interlock to form two-dimensional layers parallel to (101) (Fig. 2). The layers may then be considered to stack in an ABCABC arrangement perpendicular to (101) with the C—H···N interactions between type A molecules linking the layers (Fig. 3).