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To compare the structural properties of oxalamide and thiooxalamide groups in the formation of hydrogen bonds suitable for supramolecular assemblies a series of retropeptides was studied. Some of them, having oxalamide bridges, are gelators of organic solvents and water. However, retropeptides with oxygen replaced by the sp2 sulfur have not exhibited such properties. The crystal structures of the two title compounds are homostructural, i.e. they have similar packing arrangements. The monothio compound crystallizes in the orthorhombic space group P212121 with two molecules in the asymmetric unit arranged in a hydrogen-bond network with an approximate 41 axis along the crystallographic b axis. However, the dithio and dioxo analogues crystallize in the tetragonal space group P41 with similar packing patterns and hydrogen-bonding systems arranged in agreement with a crystallographic 41 axis. Thus, these two analogues are isostructural having closely related hydrogen-bonding patterns in spite of the different size and polarity of oxygen and sulfur which serve as the proton acceptors.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108768103029173/sn0036sup1.cif
Contains datablocks global, I, II

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108768103029173/sn0036Isup2.hkl
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108768103029173/sn0036IIsup3.hkl
Contains datablock II

CCDC references: 230851; 230852

Computing details top

Data collection: CAD-4 EXPRESS (Enraf Nonius, 1994) for (I); Collect (Nonius BV, 1997-2000) for (II). Cell refinement: CAD-4 EXPRESS (Enraf Nonius, 1994) for (I); HKL SCALEPACK (Otwinowski & Minor 1997) for (II). Data reduction: XCAD4 (Harms & Wocadlo, 1995) for (I); HKL DENZO and SCALEPACK (Otwinowski & Minor 1997) for (II). For both compounds, program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997). Software used to prepare material for publication: PLATON (Spek, 1990) for (I); WinGX publication routines (Farrugia, 1999) for (II).

Figures top
[Figure 1]
[Figure 2]
[Figure 3]
[Figure 4]
[Figure 5]
(I) N,N'-monotiooxalyl-bis(L-leucine methyl ester) top
Crystal data top
C16H28N2O5SF(000) = 1552
Mr = 360.46Dx = 1.119 Mg m3
Orthorhombic, P212121Cu Kα radiation, λ = 1.54128 Å
Hall symbol: P 2ac 2abCell parameters from 20 reflections
a = 12.562 (9) Åθ = 9–19°
b = 16.156 (5) ŵ = 1.55 mm1
c = 21.086 (8) ÅT = 293 K
V = 4279 (4) Å3Prism, yellow
Z = 80.4 × 0.2 × 0.15 mm
Data collection top
Enraf Nonius CAD4
diffractometer
Rint = 0.035
non–profiled ω/2θ scansθmax = 76.4°, θmin = 3.5°
Absorption correction: ψ scan
North A.C.T., Phillips D.C. & Mathews F.S. (1968) Acta. Cryst. A24, 351 Number of ψ scan sets used was 7 Theta correction was applied. Averaged transmission function was used. No Fourier smoothing was applied.
h = 015
Tmin = 0.752, Tmax = 0.791k = 020
9699 measured reflectionsl = 2626
8972 independent reflections3 standard reflections every 120 min
4033 reflections with I > 2σ(I) intensity decay: 5%
Refinement top
Refinement on F2H atoms treated by a mixture of independent and constrained refinement
Least-squares matrix: full w = 1/[σ2(Fo2) + (0.0634P)2 + 0.8826P]
where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.060(Δ/σ)max = 0.002
wR(F2) = 0.174Δρmax = 0.24 e Å3
S = 1.01Δρmin = 0.16 e Å3
8972 reflectionsAbsolute structure: Flack H D (1983), Acta Cryst. A39, 876-881
433 parametersAbsolute structure parameter: 0.01 (3)
0 restraints
Crystal data top
C16H28N2O5SV = 4279 (4) Å3
Mr = 360.46Z = 8
Orthorhombic, P212121Cu Kα radiation
a = 12.562 (9) ŵ = 1.55 mm1
b = 16.156 (5) ÅT = 293 K
c = 21.086 (8) Å0.4 × 0.2 × 0.15 mm
Data collection top
Enraf Nonius CAD4
diffractometer
4033 reflections with I > 2σ(I)
Absorption correction: ψ scan
North A.C.T., Phillips D.C. & Mathews F.S. (1968) Acta. Cryst. A24, 351 Number of ψ scan sets used was 7 Theta correction was applied. Averaged transmission function was used. No Fourier smoothing was applied.
Rint = 0.035
Tmin = 0.752, Tmax = 0.7913 standard reflections every 120 min
9699 measured reflections intensity decay: 5%
8972 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.060H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.174Δρmax = 0.24 e Å3
S = 1.01Δρmin = 0.16 e Å3
8972 reflectionsAbsolute structure: Flack H D (1983), Acta Cryst. A39, 876-881
433 parametersAbsolute structure parameter: 0.01 (3)
0 restraints
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
S110.97619 (12)0.33587 (8)0.31144 (6)0.0933 (4)
O10.8294 (3)0.54782 (19)0.30879 (13)0.0828 (9)
O20.6739 (3)0.3967 (3)0.1880 (2)0.1227 (14)
O30.6221 (3)0.5235 (3)0.16328 (18)0.1195 (13)
O210.8128 (4)0.4070 (3)0.4880 (2)0.1411 (16)
O310.9370 (4)0.3190 (3)0.5193 (2)0.1386 (16)
N10.8671 (3)0.4609 (2)0.22801 (16)0.0703 (10)
H10.90310.41840.21610.084*
N110.9405 (3)0.4588 (2)0.38999 (16)0.0786 (11)
H110.91640.5080.39570.094*
C10.8703 (3)0.4839 (3)0.2881 (2)0.0602 (10)
C20.8042 (4)0.5057 (3)0.1815 (2)0.0741 (12)
H20.79850.56380.19430.089*
C30.6939 (4)0.4676 (4)0.1787 (2)0.0856 (14)
C40.5132 (5)0.4929 (5)0.1574 (4)0.159 (3)
H410.4670.53780.14590.238*
H420.49070.470.19720.238*
H430.51050.45090.12530.238*
C50.8534 (4)0.5005 (3)0.1158 (2)0.0837 (14)
H510.86580.44270.10580.1*
H520.80230.52160.08530.1*
C60.9563 (5)0.5469 (4)0.1076 (3)0.1129 (19)
H61.00550.52920.1410.135*
C71.0055 (7)0.5247 (6)0.0431 (4)0.189 (4)
H711.07130.55420.03780.284*
H720.95720.53990.00980.284*
H731.01880.46630.04140.284*
C80.9416 (6)0.6393 (4)0.1128 (4)0.176 (3)
H811.00920.66630.10770.264*
H820.91290.65250.15380.264*
H830.89360.65780.08040.264*
C110.9317 (3)0.4263 (2)0.3326 (2)0.0618 (11)
C210.9881 (4)0.4170 (3)0.4440 (2)0.0828 (13)
H211.03240.37160.4280.099*
C310.9021 (6)0.3804 (4)0.4848 (3)0.0954 (16)
C410.8611 (7)0.2828 (5)0.5639 (4)0.180 (4)
H4110.89480.23850.58670.271*
H4120.80090.26170.5410.271*
H4130.83790.32440.59330.271*
C511.0583 (5)0.4747 (3)0.4818 (2)0.1011 (17)
H5111.08660.44440.51780.121*
H5121.01430.5190.49850.121*
C611.1511 (6)0.5134 (5)0.4463 (3)0.131 (2)
H611.12180.54190.40910.157*
C711.2049 (8)0.5783 (5)0.4875 (5)0.202 (4)
H7111.15270.61690.50260.303*
H7121.25750.60720.46290.303*
H7131.23870.55180.52290.303*
C811.2280 (7)0.4490 (7)0.4226 (4)0.187 (4)
H8111.19030.40890.39760.281*
H8121.26110.4220.4580.281*
H8131.28150.47510.3970.281*
S130.88969 (11)0.09017 (8)0.23114 (8)0.1045 (5)
O120.9117 (2)0.30274 (19)0.14608 (15)0.0815 (9)
O221.0976 (4)0.1287 (2)0.05469 (16)0.1258 (15)
O230.6028 (5)0.1787 (5)0.1320 (3)0.195 (3)
O321.2046 (5)0.2287 (3)0.0290 (2)0.172 (2)
O330.5314 (4)0.0995 (3)0.2026 (3)0.180 (2)
N121.0372 (3)0.2054 (2)0.16303 (16)0.0692 (10)
H121.05160.16070.18350.083*
N130.7671 (3)0.2173 (2)0.20851 (18)0.0823 (11)
H130.76110.26680.19390.099*
C120.9395 (4)0.2359 (3)0.16768 (19)0.0646 (11)
C130.8603 (4)0.1819 (3)0.20357 (19)0.0663 (11)
C221.1200 (3)0.2424 (3)0.1260 (2)0.0715 (12)
H221.09760.29830.11390.086*
C230.6733 (4)0.1806 (3)0.2364 (3)0.0937 (15)
H230.69510.1320.2610.112*
C321.1375 (5)0.1926 (3)0.0667 (2)0.0937 (16)
C330.5988 (6)0.1522 (5)0.1837 (5)0.128 (2)
C421.2292 (9)0.1851 (6)0.0306 (4)0.238 (6)
H4211.27940.2170.05470.356*
H4221.16510.17810.05470.356*
H4231.25910.13190.02110.356*
C430.4556 (7)0.0778 (7)0.1509 (6)0.267 (7)
H4310.40450.03850.16650.4*
H4320.4940.0540.1160.4*
H4330.41930.12680.1370.4*
C521.2238 (4)0.2486 (3)0.1633 (3)0.0893 (15)
H5211.24090.19420.17970.107*
H5221.280.26410.13410.107*
C530.6160 (4)0.2404 (4)0.2807 (3)0.1057 (17)
H5310.59360.28830.25640.127*
H5320.55240.21360.29670.127*
C621.2244 (5)0.3078 (5)0.2167 (3)0.124 (2)
H621.16260.29610.24360.149*
C630.6815 (5)0.2698 (5)0.3364 (3)0.129 (2)
H630.74820.29190.31920.155*
C721.3251 (6)0.2984 (6)0.2569 (4)0.195 (4)
H7211.32360.33780.2910.292*
H7221.38660.30810.2310.292*
H7231.32810.24340.27410.292*
C730.6222 (7)0.3424 (6)0.3678 (4)0.203 (4)
H7310.66190.36140.40390.304*
H7320.5530.32420.38130.304*
H7330.61450.38670.33790.304*
C821.2170 (7)0.3956 (4)0.1945 (4)0.184 (4)
H8211.21720.43190.23060.275*
H8221.15220.40310.1710.275*
H8231.27670.40810.16780.275*
C830.7104 (7)0.2020 (7)0.3817 (4)0.188 (4)
H8310.7510.22470.41620.281*
H8320.7520.1610.36010.281*
H8330.64670.17710.3980.281*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
S110.1154 (10)0.0755 (8)0.0890 (8)0.0199 (8)0.0116 (8)0.0128 (7)
O10.112 (2)0.0697 (18)0.0671 (17)0.0213 (18)0.0075 (18)0.0096 (16)
O20.088 (2)0.102 (3)0.178 (4)0.007 (2)0.017 (3)0.019 (3)
O30.100 (3)0.128 (3)0.130 (3)0.023 (3)0.020 (2)0.030 (3)
O210.129 (4)0.163 (4)0.132 (3)0.024 (3)0.017 (3)0.046 (3)
O310.154 (4)0.119 (3)0.143 (4)0.010 (3)0.013 (3)0.055 (3)
N10.083 (3)0.065 (2)0.063 (2)0.0101 (19)0.004 (2)0.0099 (19)
N110.107 (3)0.065 (2)0.063 (2)0.018 (2)0.011 (2)0.0063 (19)
C10.058 (3)0.058 (3)0.064 (3)0.005 (2)0.002 (2)0.002 (2)
C20.088 (3)0.067 (3)0.067 (3)0.010 (3)0.007 (3)0.002 (2)
C30.092 (4)0.096 (4)0.069 (3)0.005 (4)0.009 (3)0.011 (3)
C40.084 (4)0.220 (8)0.172 (6)0.015 (5)0.041 (4)0.013 (6)
C50.102 (4)0.077 (3)0.072 (3)0.004 (3)0.003 (3)0.004 (2)
C60.092 (4)0.138 (5)0.109 (4)0.010 (4)0.015 (3)0.000 (4)
C70.170 (7)0.238 (9)0.159 (7)0.027 (7)0.078 (6)0.001 (7)
C80.173 (7)0.103 (5)0.251 (10)0.057 (5)0.017 (7)0.010 (5)
C110.061 (3)0.057 (2)0.067 (3)0.010 (2)0.003 (2)0.002 (2)
C210.097 (4)0.081 (3)0.070 (3)0.020 (3)0.012 (3)0.002 (3)
C310.108 (5)0.096 (4)0.082 (4)0.011 (4)0.001 (4)0.014 (3)
C410.182 (8)0.173 (7)0.186 (7)0.030 (6)0.001 (6)0.106 (6)
C510.123 (5)0.096 (4)0.085 (3)0.001 (4)0.031 (4)0.007 (3)
C610.128 (6)0.152 (6)0.112 (5)0.018 (5)0.035 (5)0.014 (5)
C710.194 (8)0.174 (7)0.239 (10)0.067 (7)0.079 (8)0.002 (7)
C810.127 (6)0.263 (11)0.172 (7)0.012 (7)0.006 (6)0.030 (8)
S130.0988 (10)0.0828 (9)0.1318 (11)0.0093 (8)0.0268 (9)0.0293 (8)
O120.082 (2)0.070 (2)0.093 (2)0.0120 (17)0.0012 (17)0.0160 (17)
O220.212 (5)0.092 (3)0.073 (2)0.039 (3)0.010 (3)0.003 (2)
O230.156 (5)0.268 (7)0.163 (5)0.072 (5)0.028 (5)0.017 (5)
O320.241 (6)0.128 (3)0.148 (4)0.060 (4)0.116 (4)0.036 (3)
O330.123 (4)0.191 (5)0.227 (6)0.076 (4)0.020 (4)0.046 (5)
N120.070 (2)0.066 (2)0.072 (2)0.005 (2)0.009 (2)0.0116 (17)
N130.069 (3)0.080 (2)0.099 (3)0.001 (2)0.006 (2)0.012 (2)
C120.071 (3)0.062 (3)0.060 (3)0.003 (2)0.002 (2)0.004 (2)
C130.065 (3)0.073 (3)0.061 (3)0.000 (2)0.004 (2)0.000 (2)
C220.071 (3)0.062 (3)0.082 (3)0.003 (2)0.009 (3)0.000 (2)
C230.070 (3)0.098 (4)0.113 (4)0.007 (3)0.010 (3)0.009 (3)
C320.131 (5)0.066 (3)0.084 (4)0.012 (3)0.024 (3)0.001 (3)
C330.089 (5)0.135 (6)0.162 (7)0.022 (4)0.023 (6)0.025 (6)
C420.381 (15)0.191 (8)0.142 (6)0.056 (9)0.165 (8)0.057 (6)
C430.151 (8)0.267 (12)0.383 (16)0.033 (8)0.023 (10)0.175 (13)
C520.073 (3)0.080 (3)0.114 (4)0.002 (3)0.015 (3)0.004 (3)
C530.081 (4)0.112 (4)0.124 (4)0.008 (3)0.029 (4)0.000 (4)
C620.091 (4)0.176 (7)0.107 (4)0.001 (4)0.000 (4)0.039 (5)
C630.091 (4)0.166 (6)0.130 (6)0.034 (5)0.010 (4)0.029 (5)
C720.148 (6)0.262 (10)0.175 (7)0.040 (7)0.066 (6)0.022 (7)
C730.187 (8)0.203 (8)0.218 (9)0.026 (8)0.043 (7)0.104 (7)
C820.183 (7)0.100 (5)0.268 (10)0.023 (5)0.078 (7)0.083 (6)
C830.175 (8)0.253 (11)0.135 (6)0.002 (8)0.020 (6)0.025 (7)
Geometric parameters (Å, º) top
S11—C111.627 (4)S13—C131.634 (4)
O1—C11.233 (5)O12—C121.223 (5)
O2—C31.189 (6)O22—C321.175 (6)
O3—C31.318 (6)O23—C331.174 (8)
O3—C41.459 (7)O32—C321.297 (6)
O21—C311.203 (6)O32—C421.472 (7)
O31—C311.305 (6)O33—C331.264 (8)
O31—C411.461 (8)O33—C431.489 (10)
N1—C11.322 (5)N12—C121.326 (5)
N1—C21.452 (5)N12—C221.431 (5)
N1—H10.86N12—H120.86
N11—C111.324 (5)N13—C131.307 (5)
N11—C211.452 (5)N13—C231.445 (6)
N11—H110.86N13—H130.86
C1—C111.529 (6)C12—C131.525 (6)
C2—C31.517 (7)C22—C321.505 (7)
C2—C51.520 (6)C22—C521.525 (6)
C2—H20.98C22—H220.98
C4—H410.96C23—C331.524 (10)
C4—H420.96C23—C531.524 (7)
C4—H430.96C23—H230.98
C5—C61.505 (7)C42—H4210.96
C5—H510.97C42—H4220.96
C5—H520.97C42—H4230.96
C6—C81.507 (9)C43—H4310.96
C6—C71.536 (8)C43—H4320.96
C6—H60.98C43—H4330.96
C7—H710.96C52—C621.477 (7)
C7—H720.96C52—H5210.97
C7—H730.96C52—H5220.97
C8—H810.96C53—C631.509 (8)
C8—H820.96C53—H5310.97
C8—H830.96C53—H5320.97
C21—C311.504 (7)C62—C821.497 (9)
C21—C511.512 (7)C62—C721.531 (9)
C21—H210.98C62—H620.98
C41—H4110.96C63—C831.498 (10)
C41—H4120.96C63—C731.540 (9)
C41—H4130.96C63—H630.98
C51—C611.519 (8)C72—H7210.96
C51—H5110.97C72—H7220.96
C51—H5120.97C72—H7230.96
C61—C811.505 (9)C73—H7310.96
C61—C711.520 (9)C73—H7320.96
C61—H610.98C73—H7330.96
C71—H7110.96C82—H8210.96
C71—H7120.96C82—H8220.96
C71—H7130.96C82—H8230.96
C81—H8110.96C83—H8310.96
C81—H8120.96C83—H8320.96
C81—H8130.96C83—H8330.96
C3—O3—C4115.5 (5)C32—O32—C42116.3 (5)
C31—O31—C41116.3 (5)C33—O33—C43110.9 (8)
C1—N1—C2121.6 (4)C12—N12—C22123.9 (4)
C1—N1—H1119.2C12—N12—H12118.1
C2—N1—H1119.2C22—N12—H12118.1
C11—N11—C21124.6 (4)C13—N13—C23125.7 (4)
C11—N11—H11117.7C13—N13—H13117.2
C21—N11—H11117.7C23—N13—H13117.2
O1—C1—N1124.2 (4)O12—C12—N12124.4 (4)
O1—C1—C11120.2 (4)O12—C12—C13120.2 (4)
N1—C1—C11115.6 (4)N12—C12—C13115.3 (4)
N1—C2—C3108.7 (4)N13—C13—C12111.9 (4)
N1—C2—C5111.5 (4)N13—C13—S13124.8 (3)
C3—C2—C5108.2 (4)C12—C13—S13123.2 (3)
N1—C2—H2109.4N12—C22—C32109.6 (4)
C3—C2—H2109.4N12—C22—C52111.6 (4)
C5—C2—H2109.4C32—C22—C52109.8 (4)
O2—C3—O3123.8 (5)N12—C22—H22108.6
O2—C3—C2125.3 (5)C32—C22—H22108.6
O3—C3—C2110.9 (5)C52—C22—H22108.6
O3—C4—H41109.5N13—C23—C33109.1 (5)
O3—C4—H42109.5N13—C23—C53112.0 (4)
H41—C4—H42109.5C33—C23—C53110.4 (5)
O3—C4—H43109.5N13—C23—H23108.4
H41—C4—H43109.5C33—C23—H23108.4
H42—C4—H43109.5C53—C23—H23108.4
C6—C5—C2115.2 (4)O22—C32—O32122.7 (5)
C6—C5—H51108.5O22—C32—C22125.9 (5)
C2—C5—H51108.5O32—C32—C22111.3 (5)
C6—C5—H52108.5O23—C33—O33124.5 (9)
C2—C5—H52108.5O23—C33—C23122.8 (7)
H51—C5—H52107.5O33—C33—C23112.7 (8)
C8—C6—C5112.3 (5)O32—C42—H421109.5
C8—C6—C7110.2 (6)O32—C42—H422109.5
C5—C6—C7109.3 (5)H421—C42—H422109.5
C8—C6—H6108.3O32—C42—H423109.5
C5—C6—H6108.3H421—C42—H423109.5
C7—C6—H6108.3H422—C42—H423109.5
C6—C7—H71109.5O33—C43—H431109.5
C6—C7—H72109.5O33—C43—H432109.5
H71—C7—H72109.5H431—C43—H432109.5
C6—C7—H73109.5O33—C43—H433109.5
H71—C7—H73109.5H431—C43—H433109.5
H72—C7—H73109.5H432—C43—H433109.5
C6—C8—H81109.5C62—C52—C22116.1 (4)
C6—C8—H82109.5C62—C52—H521108.3
H81—C8—H82109.5C22—C52—H521108.3
C6—C8—H83109.5C62—C52—H522108.3
H81—C8—H83109.5C22—C52—H522108.3
H82—C8—H83109.5H521—C52—H522107.4
N11—C11—C1111.2 (3)C63—C53—C23114.7 (5)
N11—C11—S11125.3 (3)C63—C53—H531108.6
C1—C11—S11123.5 (3)C23—C53—H531108.6
N11—C21—C31109.6 (4)C63—C53—H532108.6
N11—C21—C51111.5 (4)C23—C53—H532108.6
C31—C21—C51111.1 (4)H531—C53—H532107.6
N11—C21—H21108.2C52—C62—C82112.0 (6)
C31—C21—H21108.2C52—C62—C72111.3 (6)
C51—C21—H21108.2C82—C62—C72108.5 (7)
O21—C31—O31123.6 (6)C52—C62—H62108.3
O21—C31—C21124.2 (5)C82—C62—H62108.3
O31—C31—C21112.1 (5)C72—C62—H62108.3
O31—C41—H411109.5C83—C63—C53113.5 (6)
O31—C41—H412109.5C83—C63—C73113.5 (7)
H411—C41—H412109.5C53—C63—C73108.1 (7)
O31—C41—H413109.5C83—C63—H63107.1
H411—C41—H413109.5C53—C63—H63107.1
H412—C41—H413109.5C73—C63—H63107.1
C21—C51—C61116.1 (5)C62—C72—H721109.5
C21—C51—H511108.3C62—C72—H722109.5
C61—C51—H511108.3H721—C72—H722109.5
C21—C51—H512108.3C62—C72—H723109.5
C61—C51—H512108.3H721—C72—H723109.5
H511—C51—H512107.4H722—C72—H723109.5
C81—C61—C51111.9 (6)C63—C73—H731109.5
C81—C61—C71112.4 (7)C63—C73—H732109.5
C51—C61—C71110.1 (7)H731—C73—H732109.5
C81—C61—H61107.4C63—C73—H733109.5
C51—C61—H61107.4H731—C73—H733109.5
C71—C61—H61107.4H732—C73—H733109.5
C61—C71—H711109.5C62—C82—H821109.5
C61—C71—H712109.5C62—C82—H822109.5
H711—C71—H712109.5H821—C82—H822109.5
C61—C71—H713109.5C62—C82—H823109.5
H711—C71—H713109.5H821—C82—H823109.5
H712—C71—H713109.5H822—C82—H823109.5
C61—C81—H811109.5C63—C83—H831109.5
C61—C81—H812109.5C63—C83—H832109.5
H811—C81—H812109.5H831—C83—H832109.5
C61—C81—H813109.5C63—C83—H833109.5
H811—C81—H813109.5H831—C83—H833109.5
H812—C81—H813109.5H832—C83—H833109.5
C2—N1—C1—O16.6 (6)C22—N12—C12—O127.2 (7)
C2—N1—C1—C11174.7 (3)C22—N12—C12—C13173.6 (4)
C1—N1—C2—C390.8 (5)C23—N13—C13—C12176.2 (4)
C1—N1—C2—C5149.9 (4)C23—N13—C13—S132.9 (7)
C4—O3—C3—O20.6 (8)O12—C12—C13—N131.9 (6)
C4—O3—C3—C2178.3 (5)N12—C12—C13—N13177.4 (4)
N1—C2—C3—O231.1 (7)O12—C12—C13—S13177.2 (3)
C5—C2—C3—O290.2 (6)N12—C12—C13—S133.5 (5)
N1—C2—C3—O3150.0 (4)C12—N12—C22—C32105.5 (5)
C5—C2—C3—O388.6 (5)C12—N12—C22—C52132.6 (4)
N1—C2—C5—C669.2 (5)C13—N13—C23—C33102.7 (6)
C3—C2—C5—C6171.2 (5)C13—N13—C23—C53134.8 (5)
C2—C5—C6—C866.5 (7)C42—O32—C32—O220.2 (11)
C2—C5—C6—C7170.8 (5)C42—O32—C32—C22179.3 (7)
C21—N11—C11—C1175.7 (4)N12—C22—C32—O226.9 (8)
C21—N11—C11—S112.5 (6)C52—C22—C32—O22116.1 (7)
O1—C1—C11—N115.6 (5)N12—C22—C32—O32173.6 (5)
N1—C1—C11—N11173.1 (4)C52—C22—C32—O3263.4 (6)
O1—C1—C11—S11172.5 (3)C43—O33—C33—O231.9 (12)
N1—C1—C11—S118.7 (5)C43—O33—C33—C23176.1 (6)
C11—N11—C21—C3198.7 (5)N13—C23—C33—O2321.1 (10)
C11—N11—C21—C51137.8 (5)C53—C23—C33—O23102.4 (9)
C41—O31—C31—O210.4 (9)N13—C23—C33—O33161.0 (5)
C41—O31—C31—C21176.0 (6)C53—C23—C33—O3375.6 (7)
N11—C21—C31—O2126.9 (8)N12—C22—C52—C6268.7 (6)
C51—C21—C31—O2196.8 (7)C32—C22—C52—C62169.5 (5)
N11—C21—C31—O31156.7 (4)N13—C23—C53—C6360.6 (7)
C51—C21—C31—O3179.6 (6)C33—C23—C53—C63177.6 (6)
N11—C21—C51—C6159.5 (6)C22—C52—C62—C8267.7 (7)
C31—C21—C51—C61177.9 (5)C22—C52—C62—C72170.6 (5)
C21—C51—C61—C8162.0 (7)C23—C53—C63—C8364.9 (7)
C21—C51—C61—C71172.3 (5)C23—C53—C63—C73168.3 (5)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O120.862.383.135 (5)146
N1—H1···S110.862.583.009 (4)112
N11—H11···O22i0.862.223.021 (5)155
N12—H12···O1ii0.862.363.105 (5)145
N12—H12···S130.862.542.993 (4)114
N13—H13···O20.862.373.155 (6)152
N11—H11···O10.862.232.636 (5)109
N13—H13···O120.862.222.634 (5)109
Symmetry codes: (i) x+2, y+1/2, z+1/2; (ii) x+2, y1/2, z+1/2.
(II) N,N'-ditiooxalyl-bis(L-leucine methyl ester) top
Crystal data top
C16H28N2O4S2Dx = 1.207 Mg m3
Mr = 376.52Mo Kα radiation, λ = 0.71069 Å
Tetragonal, P41Cell parameters from 1504 reflections
Hall symbol: P 4wθ = 2.6–23.0°
a = 11.3877 (4) ŵ = 0.27 mm1
c = 15.9829 (6) ÅT = 293 K
V = 2072.66 (13) Å3Prism, yellow
Z = 40.5 × 0.2 × 0.2 mm
F(000) = 808
Data collection top
KappaCCD
diffractometer
Rint = 0
CCD rotation images, thick slices scansθmax = 25.0°, θmin = 2.6°
2866 measured reflectionsh = 1212
2851 independent reflectionsk = 88
2608 reflections with I > 2σ(I)l = 1717
Refinement top
Refinement on F2H atoms treated by a mixture of independent and constrained refinement
Least-squares matrix: full w = 1/[σ2(Fo2) + (0.0638P)2 + 0.7469P]
where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.038(Δ/σ)max < 0.001
wR(F2) = 0.112Δρmax = 0.20 e Å3
S = 1.10Δρmin = 0.21 e Å3
2851 reflectionsAbsolute structure: Flack H D (1983), Acta Cryst. A39, 876-881
217 parametersAbsolute structure parameter: 0.33 (2)
1 restraint
Crystal data top
C16H28N2O4S2Z = 4
Mr = 376.52Mo Kα radiation
Tetragonal, P41µ = 0.27 mm1
a = 11.3877 (4) ÅT = 293 K
c = 15.9829 (6) Å0.5 × 0.2 × 0.2 mm
V = 2072.66 (13) Å3
Data collection top
KappaCCD
diffractometer
2608 reflections with I > 2σ(I)
2866 measured reflectionsRint = 0
2851 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.038H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.112Δρmax = 0.20 e Å3
S = 1.10Δρmin = 0.21 e Å3
2851 reflectionsAbsolute structure: Flack H D (1983), Acta Cryst. A39, 876-881
217 parametersAbsolute structure parameter: 0.33 (2)
1 restraint
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C810.6516 (7)1.1643 (4)0.2957 (4)0.101 (2)
H8120.68651.23690.2780.151*
H8180.70091.12780.33690.151*
H8110.57571.17960.31950.151*
S10.90612 (9)0.70581 (9)0.12699 (6)0.0519 (3)
S110.92925 (8)0.92406 (9)0.34729 (5)0.0492 (3)
O310.5774 (2)0.7926 (2)0.41050 (16)0.0508 (7)
N110.7645 (3)0.8427 (3)0.24545 (17)0.0379 (7)
H110.74780.80920.19870.045*
O31.3029 (2)0.5792 (3)0.20480 (19)0.0597 (8)
C310.6000 (3)0.7814 (3)0.3295 (3)0.0444 (9)
N11.0701 (3)0.7891 (3)0.22841 (18)0.0398 (7)
H11.08760.83220.27080.048*
C210.6662 (3)0.8863 (3)0.2959 (2)0.0376 (8)
H210.69740.93160.3430.045*
O21.1986 (3)0.6287 (3)0.3169 (2)0.0714 (9)
C21.1662 (3)0.7299 (3)0.1859 (2)0.0387 (8)
H21.13330.6860.13870.046*
C51.2551 (3)0.8192 (3)0.1511 (2)0.0440 (9)
H521.280.87060.19610.053*
H511.32380.77720.13140.053*
C31.2223 (3)0.6426 (3)0.2454 (2)0.0464 (10)
C510.5843 (3)0.9654 (3)0.2445 (2)0.0427 (9)
H5110.56210.92440.19370.051*
H5120.51320.97960.27650.051*
C10.9586 (3)0.7824 (3)0.2074 (2)0.0339 (8)
C110.8761 (3)0.8506 (3)0.2658 (2)0.0339 (8)
O210.5715 (3)0.6990 (3)0.2882 (2)0.0799 (11)
C71.2952 (5)0.9884 (4)0.0564 (3)0.0710 (13)
H721.26461.03430.0110.106*
H711.36770.95240.03960.106*
H731.3091.03840.10380.106*
C61.2073 (3)0.8940 (4)0.0799 (2)0.0510 (10)
H61.13580.9330.09980.061*
C610.6383 (3)1.0830 (3)0.2209 (3)0.0496 (10)
H610.71731.06730.19930.06*
C81.1745 (4)0.8202 (4)0.0027 (3)0.0656 (12)
H821.11880.76090.01850.098*
H831.24370.78350.01940.098*
H811.14030.87010.03910.098*
C710.5701 (5)1.1425 (5)0.1522 (3)0.0737 (14)
H7120.60661.21620.13880.111*
H7130.4911.15610.17060.111*
H7110.56941.09330.10350.111*
C41.3661 (4)0.4929 (4)0.2544 (4)0.0759 (14)
H421.42170.45260.21950.114*
H431.31160.43730.27730.114*
H411.40690.53180.29910.114*
C410.5110 (4)0.6977 (4)0.4482 (3)0.0691 (13)
H4120.49890.7140.50650.104*
H4130.55370.62550.44230.104*
H4110.43630.69080.42070.104*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C810.175 (7)0.049 (3)0.079 (4)0.004 (4)0.048 (4)0.005 (3)
S10.0479 (6)0.0611 (6)0.0465 (6)0.0025 (5)0.0047 (4)0.0235 (5)
S110.0454 (5)0.0609 (6)0.0414 (5)0.0009 (5)0.0025 (4)0.0188 (5)
O310.0564 (16)0.0573 (17)0.0388 (15)0.0053 (13)0.0085 (12)0.0081 (12)
N110.0418 (18)0.0458 (17)0.0259 (15)0.0037 (14)0.0085 (13)0.0086 (13)
O30.0465 (15)0.0667 (18)0.0659 (19)0.0113 (14)0.0121 (14)0.0133 (16)
C310.044 (2)0.039 (2)0.051 (3)0.0018 (17)0.0173 (17)0.0055 (19)
N10.0423 (18)0.0480 (18)0.0293 (15)0.0032 (14)0.0070 (13)0.0062 (13)
C210.041 (2)0.038 (2)0.034 (2)0.0025 (16)0.0074 (16)0.0065 (15)
O20.113 (3)0.0548 (18)0.0457 (19)0.0131 (17)0.0172 (17)0.0103 (14)
C20.0375 (19)0.050 (2)0.0283 (19)0.0012 (16)0.0075 (15)0.0028 (16)
C50.041 (2)0.056 (2)0.035 (2)0.0026 (17)0.0089 (16)0.0018 (17)
C30.053 (2)0.045 (2)0.042 (3)0.0050 (18)0.0026 (19)0.0045 (18)
C510.038 (2)0.053 (2)0.036 (2)0.0045 (17)0.0055 (16)0.0075 (17)
C10.040 (2)0.0345 (18)0.0273 (18)0.0036 (15)0.0061 (16)0.0008 (14)
C110.042 (2)0.0318 (18)0.0284 (18)0.0062 (15)0.0080 (15)0.0016 (14)
O210.100 (3)0.0601 (19)0.080 (2)0.0316 (19)0.050 (2)0.0273 (18)
C70.081 (3)0.071 (3)0.061 (3)0.007 (3)0.013 (2)0.015 (2)
C60.049 (2)0.061 (2)0.042 (2)0.007 (2)0.0158 (19)0.0112 (19)
C610.045 (2)0.052 (2)0.052 (2)0.0018 (18)0.0027 (19)0.0079 (19)
C80.073 (3)0.086 (3)0.038 (2)0.007 (3)0.003 (2)0.020 (2)
C710.087 (3)0.070 (3)0.065 (3)0.001 (3)0.014 (3)0.015 (2)
C40.059 (3)0.059 (3)0.110 (4)0.005 (2)0.001 (3)0.019 (3)
C410.066 (3)0.072 (3)0.070 (3)0.003 (2)0.025 (3)0.027 (3)
Geometric parameters (Å, º) top
C81—C611.520 (7)C5—H510.97
C81—H8120.96C51—C611.521 (6)
C81—H8180.96C51—H5110.97
C81—H8110.96C51—H5120.97
S1—C11.665 (4)C1—C111.535 (4)
S11—C111.662 (4)C7—C61.517 (6)
O31—C311.326 (5)C7—H720.96
O31—C411.450 (5)C7—H710.96
N11—C111.315 (5)C7—H730.96
N11—C211.466 (4)C6—C81.538 (6)
N11—H110.86C6—H60.98
O3—C31.335 (5)C61—C711.506 (6)
O3—C41.454 (6)C61—H610.98
C31—O211.193 (5)C8—H820.96
C31—C211.511 (5)C8—H830.96
N1—C11.315 (5)C8—H810.96
N1—C21.454 (5)C71—H7120.96
N1—H10.86C71—H7130.96
C21—C511.535 (5)C71—H7110.96
C21—H210.98C4—H420.96
O2—C31.185 (5)C4—H430.96
C2—C31.517 (6)C4—H410.96
C2—C51.540 (5)C41—H4120.96
C2—H20.98C41—H4130.96
C5—C61.522 (5)C41—H4110.96
C5—H520.97
C61—C81—H812109.5C11—C1—S1121.0 (2)
C61—C81—H818109.5N11—C11—C1114.0 (3)
H812—C81—H818109.5N11—C11—S11125.4 (3)
C61—C81—H811109.5C1—C11—S11120.5 (2)
H812—C81—H811109.5C6—C7—H72109.5
H818—C81—H811109.5C6—C7—H71109.5
C31—O31—C41115.8 (3)H72—C7—H71109.5
C11—N11—C21125.4 (3)C6—C7—H73109.5
C11—N11—H11117.3H72—C7—H73109.5
C21—N11—H11117.3H71—C7—H73109.5
C3—O3—C4116.2 (4)C7—C6—C5110.2 (4)
O21—C31—O31124.3 (4)C7—C6—C8110.5 (4)
O21—C31—C21124.1 (4)C5—C6—C8112.4 (3)
O31—C31—C21111.6 (3)C7—C6—H6107.9
C1—N1—C2125.5 (3)C5—C6—H6107.9
C1—N1—H1117.3C8—C6—H6107.9
C2—N1—H1117.3C71—C61—C81110.5 (4)
N11—C21—C31108.0 (3)C71—C61—C51111.6 (3)
N11—C21—C51111.7 (3)C81—C61—C51112.4 (4)
C31—C21—C51110.6 (3)C71—C61—H61107.3
N11—C21—H21108.9C81—C61—H61107.3
C31—C21—H21108.9C51—C61—H61107.3
C51—C21—H21108.9C6—C8—H82109.5
N1—C2—C3109.2 (3)C6—C8—H83109.5
N1—C2—C5110.9 (3)H82—C8—H83109.5
C3—C2—C5112.5 (3)C6—C8—H81109.5
N1—C2—H2108H82—C8—H81109.5
C3—C2—H2108H83—C8—H81109.5
C5—C2—H2108C61—C71—H712109.5
C6—C5—C2113.8 (3)C61—C71—H713109.5
C6—C5—H52108.8H712—C71—H713109.5
C2—C5—H52108.8C61—C71—H711109.5
C6—C5—H51108.8H712—C71—H711109.5
C2—C5—H51108.8H713—C71—H711109.5
H52—C5—H51107.7O3—C4—H42109.5
O2—C3—O3123.6 (4)O3—C4—H43109.5
O2—C3—C2126.6 (4)H42—C4—H43109.5
O3—C3—C2109.8 (3)O3—C4—H41109.5
C61—C51—C21113.8 (3)H42—C4—H41109.5
C61—C51—H511108.8H43—C4—H41109.5
C21—C51—H511108.8O31—C41—H412109.5
C61—C51—H512108.8O31—C41—H413109.5
C21—C51—H512108.8H412—C41—H413109.5
H511—C51—H512107.7O31—C41—H411109.5
N1—C1—C11114.0 (3)H412—C41—H411109.5
N1—C1—S1125.0 (3)H413—C41—H411109.5
C41—O31—C31—O211.5 (6)N1—C1—C11—N11179.2 (3)
C41—O31—C31—C21178.3 (3)S1—C1—C11—N110.6 (4)
O21—C31—C21—N1147.1 (5)N1—C1—C11—S110.2 (4)
O21—C31—C21—C5175.3 (5)S1—C1—C11—S11178.5 (2)
O31—C31—C21—C51104.5 (4)C2—C5—C6—C7173.4 (3)
C1—N1—C2—C5119.4 (4)C2—C5—C6—C862.9 (4)
C3—C2—C5—C6169.6 (3)C21—C51—C61—C71164.3 (3)
C4—O3—C3—O22.5 (6)C21—C51—C61—C8170.9 (5)
C4—O3—C3—C2178.8 (3)C11—N11—C21—C51128.0 (4)
N1—C2—C3—O24.8 (5)C11—C1—N1—C2177.8 (3)
C5—C2—C3—O2118.9 (4)C1—N1—C2—C3116.0 (4)
C5—C2—C3—O362.5 (4)N1—C2—C3—O3173.8 (3)
C31—C21—C51—C61170.1 (3)N1—C2—C5—C667.7 (4)
C2—N1—C1—C11177.7 (3)C1—C11—N11—C21171.9 (3)
C2—N1—C1—S10.9 (5)C11—N11—C21—C31110.3 (4)
C21—N11—C11—C1171.9 (3)N11—C21—C31—O31133.1 (3)
C21—N11—C11—S117.1 (5)N11—C21—C51—C6169.7 (4)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N11—H11···O2i0.862.513.280 (4)150
N1—H1···S1ii0.863.023.732 (3)142
N11—H11···S10.862.442.935 (3)117
N1—H1···S110.862.422.923 (3)118
Symmetry codes: (i) y, x+2, z1/4; (ii) y+2, x, z+1/4.

Experimental details

(I)(II)
Crystal data
Chemical formulaC16H28N2O5SC16H28N2O4S2
Mr360.46376.52
Crystal system, space groupOrthorhombic, P212121Tetragonal, P41
Temperature (K)293293
a, b, c (Å)12.562 (9), 16.156 (5), 21.086 (8)11.3877 (4), 11.3877 (4), 15.9829 (6)
α, β, γ (°)90, 90.000 (3), 9090, 90, 90
V3)4279 (4)2072.66 (13)
Z84
Radiation typeCu KαMo Kα
µ (mm1)1.550.27
Crystal size (mm)0.4 × 0.2 × 0.150.5 × 0.2 × 0.2
Data collection
DiffractometerEnraf Nonius CAD4
diffractometer
KappaCCD
diffractometer
Absorption correctionψ scan
North A.C.T., Phillips D.C. & Mathews F.S. (1968) Acta. Cryst. A24, 351 Number of ψ scan sets used was 7 Theta correction was applied. Averaged transmission function was used. No Fourier smoothing was applied.
Tmin, Tmax0.752, 0.791
No. of measured, independent and
observed [I > 2σ(I)] reflections
9699, 8972, 4033 2866, 2851, 2608
Rint0.0350
(sin θ/λ)max1)0.6310.594
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.060, 0.174, 1.01 0.038, 0.112, 1.10
No. of reflections89722851
No. of parameters433217
No. of restraints01
H-atom treatmentH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.24, 0.160.20, 0.21
Absolute structureFlack H D (1983), Acta Cryst. A39, 876-881Flack H D (1983), Acta Cryst. A39, 876-881
Absolute structure parameter0.01 (3)0.33 (2)

Computer programs: CAD-4 EXPRESS (Enraf Nonius, 1994), Collect (Nonius BV, 1997-2000), HKL SCALEPACK (Otwinowski & Minor 1997), XCAD4 (Harms & Wocadlo, 1995), HKL DENZO and SCALEPACK (Otwinowski & Minor 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997), PLATON (Spek, 1990), WinGX publication routines (Farrugia, 1999).

Hydrogen-bond geometry (Å, º) for (I) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O120.862.383.135 (5)146.1
N1—H1···S110.862.583.009 (4)111.9
N11—H11···O22i0.862.223.021 (5)155.1
N12—H12···O1ii0.862.363.105 (5)144.7
N12—H12···S130.862.542.993 (4)114
N13—H13···O20.862.373.155 (6)151.8
N11—H11···O10.862.232.636 (5)109
N13—H13···O120.862.222.634 (5)109
Symmetry codes: (i) x+2, y+1/2, z+1/2; (ii) x+2, y1/2, z+1/2.
Selected torsion angles (º) for (II) top
C11—C1—N1—C2177.8 (3)C1—C11—N11—C21171.9 (3)
C1—N1—C2—C3116.0 (4)C11—N11—C21—C31110.3 (4)
N1—C2—C3—O3173.8 (3)N11—C21—C31—O31133.1 (3)
N1—C2—C5—C667.7 (4)N11—C21—C51—C6169.7 (4)
Hydrogen-bond geometry (Å, º) for (II) top
D—H···AD—HH···AD···AD—H···A
N11—H11···O2i0.862.513.280 (4)149.9
N1—H1···S1ii0.863.023.732 (3)141.5
N11—H11···S10.862.442.935 (3)117.3
N1—H1···S110.862.422.923 (3)118.2
Symmetry codes: (i) y, x+2, z1/4; (ii) y+2, x, z+1/4.
 

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