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In the title cooordination polymer, {[Cu(C6H2O4S)(C10H9N3)(H2O)]·C3H7NO·H2O}n, the CuII atom is in a square-pyramidal environment defined by an apically coordinated water mol­ecule, carboxyl O atoms from two different thio­phene-2,5-dicarboxyl­ate dianions and the two N atoms of a chelating di-2-pyridylamine ligand. The thio­phene-2,5-dicarboxyl­ate dianion functions as a μ2-bridging ligand to form a zigzag polymeric chain. In addition, N—H...O and O—H...O inter­molecular hydrogen bonds link the chains into a three-dimensional network structure.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536805036433/sj6152sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536805036433/sj6152Isup2.hkl
Contains datablock I

CCDC reference: 293992

Key indicators

  • Single-crystal X-ray study
  • T = 298 K
  • Mean [sigma](C-C) = 0.004 Å
  • R factor = 0.031
  • wR factor = 0.075
  • Data-to-parameter ratio = 14.7

checkCIF/PLATON results

No syntax errors found



Alert level C PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors for N4 PLAT710_ALERT_4_C Delete 1-2-3 or 2-3-4 Linear Torsion Angle ... # 13 O4 -CU1 -N3 -C12 -56.90 0.80 2.565 1.555 1.555 1.555 PLAT710_ALERT_4_C Delete 1-2-3 or 2-3-4 Linear Torsion Angle ... # 17 O4 -CU1 -N3 -C16 120.10 0.70 2.565 1.555 1.555 1.555 PLAT731_ALERT_1_C Bond Calc 0.84(3), Rep 0.842(10) ...... 3.00 su-Rat O5 -H5A 1.555 1.555 PLAT731_ALERT_1_C Bond Calc 0.84(3), Rep 0.844(10) ...... 3.00 su-Rat O5 -H5B 1.555 1.555 PLAT735_ALERT_1_C D-H Calc 0.84(3), Rep 0.844(10) ...... 3.00 su-Rat O5 -H5B 1.555 1.555 PLAT735_ALERT_1_C D-H Calc 0.84(3), Rep 0.842(10) ...... 3.00 su-Rat O5 -H5A 1.555 1.555
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 27.50 From the CIF: _reflns_number_total 4485 Count of symmetry unique reflns 2736 Completeness (_total/calc) 163.93% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 1749 Fraction of Friedel pairs measured 0.639 Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 7 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 4 ALERT type 4 Improvement, methodology, query or suggestion

Computing details top

Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 2002); software used to prepare material for publication: SHELXL97.

catena-Poly[[[aqua(di-2-pyridylamine-κ2N2,N2')copper(II)]-µ- thiophene-2,5-dicarboxylato-κ2O2:O5] N,N-dimethylformamide monohydrate] top
Crystal data top
[Cu(C6H2O4S)(C10H9N3)(H2O)]·C3H7NO·H2OF(000) = 1060
Mr = 514.01Dx = 1.497 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 6159 reflections
a = 7.067 (1) Åθ = 2.9–25.7°
b = 24.123 (2) ŵ = 1.10 mm1
c = 13.379 (1) ÅT = 298 K
V = 2280.8 (4) Å3Block, blue
Z = 40.46 × 0.41 × 0.17 mm
Data collection top
Bruker APEX area-detector
diffractometer
4485 independent reflections
Radiation source: fine-focus sealed tube4174 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
φ and ω scansθmax = 27.5°, θmin = 1.7°
Absorption correction: multi-scan
(SADABS; Bruker, 2002)
h = 99
Tmin = 0.633, Tmax = 0.836k = 3028
13430 measured reflectionsl = 1712
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.031H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.075 w = 1/[σ2(Fo2) + (0.0436P)2]
where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
4485 reflectionsΔρmax = 0.28 e Å3
306 parametersΔρmin = 0.35 e Å3
6 restraintsAbsolute structure: Flack (1983), 5538 Friedel pairs
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: 0.012 (11)
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Cu10.37248 (4)0.361767 (10)0.31324 (3)0.02829 (8)
S10.18998 (10)0.52931 (3)0.03113 (6)0.04299 (17)
O10.2441 (3)0.39926 (7)0.20203 (15)0.0373 (4)
O20.4530 (3)0.46381 (11)0.1561 (2)0.0749 (9)
O30.0218 (3)0.61444 (7)0.10425 (15)0.0439 (5)
O40.2718 (3)0.58068 (8)0.09834 (16)0.0428 (5)
O50.6477 (3)0.40404 (10)0.2890 (2)0.0593 (7)
H5A0.745 (4)0.4076 (18)0.325 (3)0.089*
O60.1613 (4)0.31322 (14)0.8349 (3)0.0946 (11)
O70.7557 (4)0.30210 (16)0.8343 (2)0.0857 (9)
N10.4492 (3)0.31666 (8)0.43208 (16)0.0320 (4)
N20.4104 (3)0.23093 (9)0.35201 (17)0.0341 (5)
H20.36090.19880.36180.041*
N30.4437 (3)0.29830 (8)0.22521 (15)0.0298 (4)
N40.2849 (6)0.39889 (15)0.8154 (3)0.0881 (10)
C10.2936 (4)0.44285 (11)0.1568 (2)0.0397 (6)
C20.1414 (4)0.47032 (11)0.0978 (2)0.0382 (6)
C30.0432 (4)0.45562 (12)0.0887 (3)0.0467 (7)
H30.09540.42460.11950.056*
C40.1477 (4)0.49215 (13)0.0277 (3)0.0472 (7)
H40.27620.48810.01450.057*
C50.0395 (4)0.53408 (10)0.0098 (2)0.0361 (6)
C60.0991 (4)0.58013 (10)0.0762 (2)0.0344 (5)
C70.4980 (4)0.34447 (13)0.5167 (2)0.0449 (6)
H70.50270.38300.51430.054*
C80.5404 (5)0.31912 (15)0.6050 (2)0.0541 (8)
H80.57500.33970.66080.065*
C90.5304 (5)0.26160 (15)0.6090 (2)0.0525 (8)
H90.55350.24310.66880.063*
C100.4867 (4)0.23256 (12)0.5249 (2)0.0432 (7)
H100.48180.19400.52630.052*
C110.4492 (4)0.26128 (10)0.43643 (18)0.0314 (5)
C120.4409 (4)0.24547 (10)0.25298 (17)0.0287 (5)
C130.4699 (4)0.20183 (11)0.1853 (2)0.0386 (6)
H130.46000.16510.20590.046*
C140.5127 (4)0.21450 (13)0.0890 (2)0.0464 (7)
H140.53270.18630.04270.056*
C150.5265 (4)0.26952 (14)0.0597 (2)0.0456 (7)
H150.55950.27880.00540.055*
C160.4900 (4)0.30991 (12)0.1296 (2)0.0398 (6)
H160.49760.34690.11010.048*
C170.1109 (12)0.4222 (3)0.7847 (8)0.179 (4)
H17A0.02860.39330.76140.269*
H17B0.13300.44820.73170.269*
H17C0.05300.44090.84020.269*
C180.4481 (11)0.4341 (2)0.8216 (8)0.165 (4)
H18A0.41860.46610.86150.248*
H18B0.48420.44570.75570.248*
H18C0.55060.41410.85190.248*
C190.2885 (7)0.3470 (2)0.8387 (3)0.0781 (12)
H190.40410.33360.86160.094*
H7A0.739 (5)0.2673 (6)0.830 (4)0.11 (2)*
H7B0.873 (2)0.3091 (14)0.841 (4)0.083 (15)*
H5B0.645 (7)0.4238 (18)0.237 (2)0.108 (19)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cu10.02809 (14)0.02259 (13)0.03420 (14)0.00414 (10)0.00069 (13)0.00008 (13)
S10.0334 (3)0.0348 (3)0.0607 (4)0.0029 (3)0.0029 (3)0.0216 (3)
O10.0366 (10)0.0260 (9)0.0492 (11)0.0012 (7)0.0078 (8)0.0125 (8)
O20.0384 (13)0.0715 (17)0.115 (2)0.0144 (11)0.0176 (13)0.0545 (16)
O30.0457 (11)0.0307 (10)0.0553 (12)0.0002 (8)0.0046 (9)0.0149 (9)
O40.0349 (11)0.0353 (10)0.0583 (13)0.0092 (8)0.0048 (9)0.0186 (9)
O50.0380 (11)0.0594 (14)0.081 (2)0.0112 (10)0.0150 (11)0.0262 (13)
O60.0739 (19)0.098 (2)0.112 (3)0.0003 (17)0.0048 (18)0.021 (2)
O70.072 (2)0.109 (3)0.076 (2)0.0086 (17)0.0026 (16)0.0011 (17)
N10.0312 (11)0.0338 (11)0.0310 (11)0.0031 (9)0.0000 (9)0.0009 (9)
N20.0425 (12)0.0233 (10)0.0366 (11)0.0027 (9)0.0000 (9)0.0022 (9)
N30.0290 (10)0.0284 (11)0.0319 (11)0.0053 (8)0.0016 (9)0.0014 (8)
N40.115 (3)0.066 (2)0.083 (2)0.017 (2)0.014 (3)0.001 (2)
C10.0356 (14)0.0334 (13)0.0501 (16)0.0052 (11)0.0028 (12)0.0094 (12)
C20.0361 (14)0.0284 (13)0.0501 (16)0.0017 (10)0.0001 (12)0.0167 (12)
C30.0378 (16)0.0353 (14)0.067 (2)0.0035 (12)0.0004 (14)0.0258 (14)
C40.0295 (13)0.0436 (17)0.069 (2)0.0022 (11)0.0042 (13)0.0242 (15)
C50.0328 (14)0.0286 (13)0.0468 (15)0.0061 (11)0.0012 (11)0.0086 (11)
C60.0372 (14)0.0283 (12)0.0379 (13)0.0094 (10)0.0065 (11)0.0050 (10)
C70.0473 (16)0.0499 (16)0.0376 (15)0.0004 (13)0.0031 (12)0.0079 (13)
C80.0560 (19)0.072 (2)0.0340 (15)0.0020 (16)0.0043 (14)0.0112 (14)
C90.0526 (19)0.076 (2)0.0285 (15)0.0057 (16)0.0004 (13)0.0127 (14)
C100.0433 (16)0.0447 (16)0.0416 (15)0.0054 (12)0.0048 (12)0.0142 (13)
C110.0276 (12)0.0352 (13)0.0315 (12)0.0026 (10)0.0033 (10)0.0032 (10)
C120.0236 (11)0.0287 (12)0.0338 (13)0.0014 (9)0.0017 (10)0.0015 (10)
C130.0420 (16)0.0300 (13)0.0438 (15)0.0072 (11)0.0065 (12)0.0079 (11)
C140.0486 (18)0.0502 (17)0.0404 (15)0.0098 (13)0.0032 (12)0.0165 (14)
C150.0411 (16)0.068 (2)0.0274 (13)0.0093 (14)0.0037 (11)0.0028 (13)
C160.0398 (15)0.0423 (15)0.0373 (15)0.0053 (12)0.0028 (11)0.0084 (11)
C170.217 (9)0.108 (5)0.211 (13)0.064 (6)0.050 (8)0.006 (6)
C180.183 (7)0.083 (4)0.229 (9)0.022 (4)0.088 (7)0.032 (6)
C190.070 (3)0.092 (3)0.072 (3)0.011 (2)0.006 (2)0.015 (2)
Geometric parameters (Å, º) top
Cu1—O4i1.958 (2)C3—C41.410 (4)
Cu1—O11.963 (2)C3—H30.9300
Cu1—N31.996 (2)C4—C51.363 (4)
Cu1—N12.002 (2)C4—H40.9300
Cu1—O52.220 (2)C5—C61.484 (4)
S1—C21.714 (3)C7—C81.363 (5)
S1—C51.715 (3)C7—H70.9300
O1—C11.262 (3)C8—C91.390 (5)
O2—C11.235 (4)C8—H80.9300
O3—C61.248 (3)C9—C101.361 (5)
O4—C61.255 (3)C9—H90.9300
O4—Cu1ii1.958 (2)C10—C111.397 (4)
O5—H5A0.842 (10)C10—H100.9300
O5—H5B0.844 (10)C12—C131.404 (3)
O6—C191.213 (6)C13—C141.358 (4)
O7—H7A0.849 (10)C13—H130.9300
O7—H7B0.849 (10)C14—C151.387 (4)
N1—C111.337 (3)C14—H140.9300
N1—C71.361 (4)C15—C161.375 (4)
N2—C111.374 (3)C15—H150.9300
N2—C121.388 (3)C16—H160.9300
N2—H20.8600C17—H17A0.9600
N3—C121.328 (3)C17—H17B0.9600
N3—C161.350 (3)C17—H17C0.9600
N4—C191.292 (6)C18—H18A0.9600
N4—C171.412 (8)C18—H18B0.9600
N4—C181.435 (7)C18—H18C0.9600
C1—C21.490 (4)C19—H190.9300
C2—C31.358 (4)
O4i—Cu1—O187.90 (8)O4—C6—C5115.2 (2)
O4i—Cu1—N3172.76 (8)N1—C7—C8123.8 (3)
O1—Cu1—N391.30 (8)N1—C7—H7118.1
O4i—Cu1—N190.23 (9)C8—C7—H7118.1
O1—Cu1—N1167.87 (8)C7—C8—C9118.1 (3)
N3—Cu1—N189.05 (9)C7—C8—H8121.0
O4i—Cu1—O594.65 (10)C9—C8—H8121.0
O1—Cu1—O594.73 (8)C10—C9—C8119.5 (3)
N3—Cu1—O592.59 (10)C10—C9—H9120.2
N1—Cu1—O597.37 (9)C8—C9—H9120.2
C2—S1—C591.85 (13)C9—C10—C11119.2 (3)
C1—O1—Cu1128.24 (18)C9—C10—H10120.4
C6—O4—Cu1ii120.20 (17)C11—C10—H10120.4
Cu1—O5—H5A133 (3)N1—C11—N2119.8 (2)
Cu1—O5—H5B111 (3)N1—C11—C10122.2 (2)
H5A—O5—H5B116 (4)N2—C11—C10118.1 (2)
H7A—O7—H7B109.7 (17)N3—C12—N2120.8 (2)
C11—N1—C7117.1 (2)N3—C12—C13122.5 (2)
C11—N1—Cu1125.28 (17)N2—C12—C13116.7 (2)
C7—N1—Cu1117.52 (19)C14—C13—C12118.4 (3)
C11—N2—C12128.3 (2)C14—C13—H13120.8
C11—N2—H2115.9C12—C13—H13120.8
C12—N2—H2115.9C13—C14—C15119.9 (3)
C12—N3—C16117.9 (2)C13—C14—H14120.0
C12—N3—Cu1124.56 (17)C15—C14—H14120.0
C16—N3—Cu1117.47 (18)C16—C15—C14118.2 (3)
C19—N4—C17118.2 (5)C16—C15—H15120.9
C19—N4—C18123.0 (5)C14—C15—H15120.9
C17—N4—C18118.8 (6)N3—C16—C15122.9 (3)
O2—C1—O1126.7 (3)N3—C16—H16118.6
O2—C1—C2118.2 (2)C15—C16—H16118.6
O1—C1—C2115.1 (2)N4—C17—H17A109.5
C3—C2—C1128.7 (2)N4—C17—H17B109.5
C3—C2—S1111.3 (2)H17A—C17—H17B109.5
C1—C2—S1120.0 (2)N4—C17—H17C109.5
C2—C3—C4113.1 (2)H17A—C17—H17C109.5
C2—C3—H3123.5H17B—C17—H17C109.5
C4—C3—H3123.5N4—C18—H18A109.5
C5—C4—C3112.5 (2)N4—C18—H18B109.5
C5—C4—H4123.8H18A—C18—H18B109.5
C3—C4—H4123.8N4—C18—H18C109.5
C4—C5—C6128.0 (3)H18A—C18—H18C109.5
C4—C5—S1111.3 (2)H18B—C18—H18C109.5
C6—C5—S1120.7 (2)O6—C19—N4128.7 (5)
O3—C6—O4126.0 (2)O6—C19—H19115.6
O3—C6—C5118.8 (2)N4—C19—H19115.6
O4i—Cu1—O1—C176.9 (2)Cu1ii—O4—C6—O31.4 (4)
N3—Cu1—O1—C1110.3 (2)Cu1ii—O4—C6—C5179.24 (18)
N1—Cu1—O1—C1158.2 (4)C4—C5—C6—O3178.9 (3)
O5—Cu1—O1—C117.6 (3)S1—C5—C6—O32.1 (4)
O4i—Cu1—N1—C11146.4 (2)C4—C5—C6—O41.7 (5)
O1—Cu1—N1—C1165.3 (5)S1—C5—C6—O4177.4 (2)
N3—Cu1—N1—C1126.4 (2)C11—N1—C7—C82.1 (4)
O5—Cu1—N1—C11118.9 (2)Cu1—N1—C7—C8175.3 (2)
O4i—Cu1—N1—C730.7 (2)N1—C7—C8—C91.0 (5)
O1—Cu1—N1—C7111.8 (4)C7—C8—C9—C102.6 (5)
N3—Cu1—N1—C7156.5 (2)C8—C9—C10—C111.2 (4)
O5—Cu1—N1—C764.0 (2)C7—N1—C11—N2176.8 (2)
O4i—Cu1—N3—C1256.9 (8)Cu1—N1—C11—N26.1 (3)
O1—Cu1—N3—C12140.4 (2)C7—N1—C11—C103.6 (4)
N1—Cu1—N3—C1227.5 (2)Cu1—N1—C11—C10173.55 (19)
O5—Cu1—N3—C12124.8 (2)C12—N2—C11—N127.9 (4)
O4i—Cu1—N3—C16120.1 (7)C12—N2—C11—C10152.4 (3)
O1—Cu1—N3—C1636.6 (2)C9—C10—C11—N12.0 (4)
N1—Cu1—N3—C16155.6 (2)C9—C10—C11—N2178.3 (3)
O5—Cu1—N3—C1658.2 (2)C16—N3—C12—N2174.5 (3)
Cu1—O1—C1—O218.7 (5)Cu1—N3—C12—N28.6 (3)
Cu1—O1—C1—C2162.29 (19)C16—N3—C12—C134.9 (4)
O2—C1—C2—C3178.8 (4)Cu1—N3—C12—C13172.06 (19)
O1—C1—C2—C32.1 (5)C11—N2—C12—N326.8 (4)
O2—C1—C2—S10.1 (4)C11—N2—C12—C13152.6 (2)
O1—C1—C2—S1179.0 (2)N3—C12—C13—C143.7 (4)
C5—S1—C2—C30.3 (3)N2—C12—C13—C14175.7 (3)
C5—S1—C2—C1179.3 (3)C12—C13—C14—C150.1 (4)
C1—C2—C3—C4178.8 (3)C13—C14—C15—C162.0 (4)
S1—C2—C3—C40.1 (4)C12—N3—C16—C152.7 (4)
C2—C3—C4—C50.6 (5)Cu1—N3—C16—C15174.5 (2)
C3—C4—C5—C6179.9 (3)C14—C15—C16—N30.8 (4)
C3—C4—C5—S10.8 (4)C17—N4—C19—O62.9 (9)
C2—S1—C5—C40.6 (3)C18—N4—C19—O6178.7 (6)
C2—S1—C5—C6179.8 (2)
Symmetry codes: (i) x, y+1, z+1/2; (ii) x, y+1, z1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O5—H5B···O20.84 (1)1.99 (3)2.671 (3)138 (4)
O7—H7B···O6iii0.85 (1)2.05 (2)2.879 (5)168 (4)
O7—H7A···O6iv0.85 (1)2.02 (1)2.861 (5)170 (5)
N2—H2···O3v0.862.242.910 (3)134
O5—H5A···O3vi0.84 (1)1.98 (2)2.773 (3)158 (4)
Symmetry codes: (iii) x+1, y, z; (iv) x+1/2, y+1/2, z; (v) x+1/2, y1/2, z+1/2; (vi) x+1, y+1, z+1/2.
 

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