The title compound, (HpyCH2)2NCH2CH2N(CH2PyH)2(ClO4)4 or C26H32N64+·4ClO4-, is a salt of a centrosymmetric tetraprotonated tetrapyridine. As in many related compounds, the pyridyl N atoms are protonated while the tertiary amine N atoms are not.
Supporting information
CCDC reference: 206753
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.004 Å
- R factor = 0.061
- wR factor = 0.111
- Data-to-parameter ratio = 11.3
checkCIF results
No syntax errors found
ADDSYM reports no extra symmetry
Data collection: COLLECT (Nonius 2000); cell refinement: DENZO and SCALEPACK; data reduction: DENZO and SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare et al. 1993); program(s) used to refine structure: TEXSAN (Molecular Structure Corporation, 1997-1999); software used to prepare material for publication: TEXSAN.
Crystal data top
C26H32N64+·4ClO4− | Z = 1 |
Mr = 826.38 | F(000) = 426.00 |
Triclinic, P1 | Dx = 1.64 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.7107 Å |
a = 8.4278 (2) Å | Cell parameters from 3927 reflections |
b = 9.2848 (2) Å | θ = 2.5–30.0° |
c = 11.3490 (3) Å | µ = 0.44 mm−1 |
α = 100.2225 (9)° | T = 100 K |
β = 105.5358 (10)° | Fragment, gold |
γ = 94.4063 (13)° | 0.25 × 0.25 × 0.10 mm |
V = 834.76 (4) Å3 | |
Data collection top
Nonius KappaCCD (with an Oxford Cryosystems Cryostream cooler) diffractometer | 4500 independent reflections |
Radiation source: fine-focus sealed tube | 2656 reflections with I > 3σ(I) |
Graphite monochromator | Rint = 0.030 |
ω scans with κ offsets | θmax = 29.5°, θmin = 2.7° |
Absorption correction: multi-scan (HKL SCALEPACK; Otwinowski & Minor, 1997) | h = −11→11 |
Tmin = 0.891, Tmax = 0.957 | k = −12→12 |
16863 measured reflections | l = −15→15 |
Refinement top
Refinement on F2 | 0 constraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.061 | Weighting scheme based on measured s.u.'s w = 1/[σ2(Fo) + 0.0014|Fo|2] |
wR(F2) = 0.111 | (Δ/σ)max = 0.0004 |
S = 0.97 | Δρmax = 0.47 e Å−3 |
2656 reflections | Δρmin = −0.40 e Å−3 |
236 parameters | Extinction correction: Zachariasen |
0 restraints | Extinction coefficient: 0.204493 |
Special details top
Geometry. The hydrogen atoms bound to C1 (H1 and H2) were found in difference maps,
refined for several cycles, then fixed. |
Refinement. Refinement of F2. The weighted R-factor wR and goodness
of fit are based on F2, conventional R-factors R are
based on F. R-factors based on F2 are statistically about
twice as large as those based on F. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl1 | 0.84351 (7) | 0.63815 (7) | 0.17548 (6) | 0.0230 (2) | |
Cl2 | 0.73827 (7) | 0.74387 (6) | 0.67727 (6) | 0.0216 (2) | |
O1 | 0.9857 (3) | 0.7327 (2) | 0.1791 (2) | 0.0387 (7) | |
O2 | 0.7002 (3) | 0.6622 (2) | 0.0834 (2) | 0.0367 (6) | |
O3 | 0.8708 (3) | 0.4842 (2) | 0.1450 (2) | 0.0366 (6) | |
O4 | 0.8162 (3) | 0.6646 (2) | 0.2977 (2) | 0.0358 (6) | |
O5 | 0.7968 (2) | 0.8769 (2) | 0.6446 (2) | 0.0332 (6) | |
O6 | 0.7417 (3) | 0.6186 (2) | 0.5859 (2) | 0.0485 (7) | |
O7 | 0.5726 (2) | 0.7496 (2) | 0.6860 (2) | 0.0394 (7) | |
O8 | 0.8436 (3) | 0.7323 (2) | 0.7976 (2) | 0.0449 (7) | |
N1 | 0.7134 (3) | 0.1240 (2) | 0.0577 (2) | 0.0187 (6) | |
N2 | 0.8153 (3) | 0.2779 (2) | 0.3004 (2) | 0.0210 (6) | |
N3 | 0.7004 (3) | 0.3405 (2) | −0.1057 (2) | 0.0225 (6) | |
C1 | 0.5326 (3) | 0.0808 (3) | 0.0335 (2) | 0.0172 (6) | |
C2 | 0.8222 (3) | 0.3616 (3) | 0.4112 (3) | 0.0230 (7) | |
C3 | 0.8304 (3) | 0.2993 (3) | 0.5117 (3) | 0.0247 (7) | |
C4 | 0.8311 (3) | 0.1470 (3) | 0.4975 (3) | 0.0271 (8) | |
C5 | 0.8220 (3) | 0.0629 (3) | 0.3812 (3) | 0.0257 (7) | |
C6 | 0.8137 (3) | 0.1298 (3) | 0.2816 (3) | 0.0218 (7) | |
C7 | 0.8130 (3) | 0.0538 (3) | 0.1530 (3) | 0.0241 (7) | |
C8 | 0.6368 (3) | 0.4327 (3) | −0.1791 (3) | 0.0254 (7) | |
C9 | 0.5456 (3) | 0.3778 (3) | −0.3002 (3) | 0.0258 (8) | |
C10 | 0.5186 (3) | 0.2266 (3) | −0.3449 (3) | 0.0261 (7) | |
C11 | 0.5874 (3) | 0.1338 (3) | −0.2670 (3) | 0.0245 (7) | |
C12 | 0.6812 (3) | 0.1923 (3) | −0.1460 (3) | 0.0198 (7) | |
C13 | 0.7681 (3) | 0.1034 (3) | −0.0556 (3) | 0.0211 (7) | |
H1 | 0.5056 | 0.1070 | 0.1235 | 0.022* | |
H2 | 0.4668 | 0.1445 | −0.0211 | 0.022* | |
H3 | 0.8115 | 0.3247 | 0.2320 | 0.025* | |
H4 | 0.8213 | 0.4651 | 0.4193 | 0.028* | |
H5 | 0.8356 | 0.3583 | 0.5904 | 0.030* | |
H6 | 0.8377 | 0.1012 | 0.5669 | 0.032* | |
H7 | 0.8216 | −0.0409 | 0.3707 | 0.031* | |
H8 | 0.7674 | −0.0467 | 0.1384 | 0.029* | |
H9 | 0.9238 | 0.0593 | 0.1477 | 0.029* | |
H10 | 0.7618 | 0.3812 | −0.0214 | 0.027* | |
H11 | 0.6552 | 0.5362 | −0.1469 | 0.030* | |
H12 | 0.5013 | 0.4424 | −0.3531 | 0.031* | |
H13 | 0.4535 | 0.1865 | −0.4284 | 0.031* | |
H14 | 0.5696 | 0.0300 | −0.2973 | 0.029* | |
H15 | 0.7447 | 0.0018 | −0.0950 | 0.025* | |
H16 | 0.8844 | 0.1334 | −0.0330 | 0.025* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.0222 (3) | 0.0168 (3) | 0.0292 (4) | 0.0026 (2) | 0.0051 (3) | 0.0056 (3) |
Cl2 | 0.0230 (3) | 0.0178 (3) | 0.0247 (4) | 0.0022 (2) | 0.0082 (3) | 0.0044 (3) |
O1 | 0.0336 (12) | 0.0335 (11) | 0.054 (2) | −0.0031 (9) | 0.0195 (11) | 0.0157 (11) |
O2 | 0.0349 (12) | 0.0331 (11) | 0.0366 (13) | 0.0120 (9) | −0.0021 (10) | 0.0090 (10) |
O3 | 0.0499 (13) | 0.0191 (10) | 0.0370 (13) | 0.0105 (9) | 0.0045 (10) | 0.0058 (9) |
O4 | 0.0365 (12) | 0.0426 (12) | 0.0323 (13) | 0.0062 (9) | 0.0154 (10) | 0.0093 (10) |
O5 | 0.0323 (11) | 0.0254 (10) | 0.047 (1) | 0.0015 (8) | 0.0132 (10) | 0.0182 (10) |
O6 | 0.078 (2) | 0.0253 (11) | 0.048 (2) | 0.0047 (11) | 0.037 (1) | −0.0051 (10) |
O7 | 0.0249 (11) | 0.0324 (11) | 0.064 (2) | 0.0026 (9) | 0.0199 (11) | 0.0077 (11) |
O8 | 0.0406 (13) | 0.0465 (13) | 0.041 (2) | −0.0084 (10) | −0.0041 (11) | 0.0230 (11) |
N1 | 0.0168 (10) | 0.0191 (11) | 0.0199 (12) | 0.0017 (8) | 0.0054 (9) | 0.0033 (9) |
N2 | 0.0227 (11) | 0.0209 (11) | 0.0199 (12) | 0.0036 (9) | 0.0051 (10) | 0.0064 (9) |
N3 | 0.0255 (11) | 0.0209 (11) | 0.0214 (13) | −0.0000 (9) | 0.0090 (10) | 0.0028 (9) |
C1 | 0.0163 (11) | 0.0162 (12) | 0.019 (1) | 0.0021 (9) | 0.0051 (10) | 0.0031 (10) |
C2 | 0.0216 (13) | 0.0205 (13) | 0.026 (2) | 0.0011 (10) | 0.0067 (12) | 0.0032 (11) |
C3 | 0.0207 (13) | 0.031 (2) | 0.023 (2) | 0.0022 (11) | 0.0071 (12) | 0.0065 (12) |
C4 | 0.023 (1) | 0.031 (2) | 0.031 (2) | 0.0025 (11) | 0.0094 (12) | 0.0138 (13) |
C5 | 0.0199 (13) | 0.0182 (13) | 0.038 (2) | 0.0010 (10) | 0.0067 (12) | 0.0073 (12) |
C6 | 0.0137 (12) | 0.0222 (13) | 0.025 (2) | −0.0010 (10) | 0.0014 (11) | 0.0016 (11) |
C7 | 0.0200 (13) | 0.0189 (13) | 0.030 (2) | 0.0031 (10) | 0.0023 (12) | 0.0022 (11) |
C8 | 0.030 (2) | 0.0181 (13) | 0.032 (2) | 0.0022 (11) | 0.0139 (13) | 0.0086 (12) |
C9 | 0.028 (1) | 0.025 (1) | 0.030 (2) | 0.0038 (11) | 0.0143 (13) | 0.0130 (12) |
C10 | 0.026 (1) | 0.030 (2) | 0.023 (2) | −0.0006 (11) | 0.0088 (12) | 0.0068 (12) |
C11 | 0.025 (1) | 0.0199 (13) | 0.029 (2) | −0.0005 (11) | 0.0119 (13) | 0.0020 (11) |
C12 | 0.0201 (12) | 0.0182 (12) | 0.025 (2) | −0.0003 (10) | 0.0140 (12) | 0.0045 (11) |
C13 | 0.0176 (12) | 0.0200 (12) | 0.026 (2) | 0.0014 (10) | 0.0086 (11) | 0.0035 (11) |
Geometric parameters (Å, º) top
Cl1—O1 | 1.417 (2) | C8—C9 | 1.366 (4) |
Cl1—O2 | 1.432 (2) | C9—C10 | 1.384 (4) |
Cl1—O3 | 1.460 (2) | C10—C11 | 1.390 (4) |
Cl1—O4 | 1.447 (2) | C11—C12 | 1.376 (4) |
Cl2—O5 | 1.440 (2) | C12—C13 | 1.504 (4) |
Cl2—O6 | 1.422 (2) | N2—H3 | 0.950 |
Cl2—O7 | 1.431 (2) | N3—H10 | 0.950 |
Cl2—O8 | 1.443 (2) | C1—H1 | 1.096 |
N1—C1 | 1.483 (3) | C1—H2 | 1.019 |
N1—C7 | 1.465 (3) | C2—H4 | 0.950 |
N1—C13 | 1.466 (3) | C3—H5 | 0.950 |
N2—C2 | 1.340 (3) | C4—H6 | 0.950 |
N2—C6 | 1.352 (3) | C5—H7 | 0.950 |
N3—C8 | 1.341 (3) | C7—H8 | 0.950 |
N3—C12 | 1.354 (3) | C7—H9 | 0.950 |
C1—C1i | 1.542 (5) | C8—H11 | 0.950 |
C2—C3 | 1.356 (4) | C9—H12 | 0.950 |
C3—C4 | 1.395 (4) | C10—H13 | 0.950 |
C4—C5 | 1.389 (4) | C11—H14 | 0.950 |
C5—C6 | 1.372 (4) | C13—H15 | 0.950 |
C6—C7 | 1.502 (4) | C13—H16 | 0.950 |
| | | |
O1···C12ii | 2.977 (3) | O4···O6 | 3.582 (3) |
O1···N3ii | 3.068 (3) | O4···N2 | 3.596 (3) |
O1···C13ii | 3.227 (3) | O5···C6iv | 3.172 (3) |
O1···C7iii | 3.442 (3) | O5···C11vi | 3.250 (3) |
O1···C3iv | 3.511 (4) | O5···C4iii | 3.285 (3) |
O1···C4iv | 3.513 (4) | O5···C5iv | 3.317 (3) |
O1···C11ii | 3.526 (3) | O5···C7iv | 3.407 (3) |
O2···C8 | 3.228 (4) | O6···C2 | 3.062 (3) |
O2···N3 | 3.355 (3) | O6···C3 | 3.139 (3) |
O2···C8v | 3.411 (3) | O6···C9vii | 3.318 (3) |
O2···C1v | 3.428 (3) | O6···C9v | 3.496 (4) |
O2···N3v | 3.451 (3) | O6···N2iv | 3.599 (3) |
O2···C7iii | 3.577 (3) | O7···C2viii | 3.233 (3) |
O3···N3 | 2.847 (3) | O7···N2viii | 3.306 (3) |
O3···N2 | 2.917 (3) | O7···C9vii | 3.477 (3) |
O3···O8iv | 3.261 (3) | O7···C3viii | 3.478 (3) |
O3···N1 | 3.371 (3) | O7···C11vi | 3.500 (3) |
O3···C2 | 3.522 (3) | O7···C8vii | 3.562 (3) |
O4···C9v | 3.053 (3) | O8···C7iv | 3.238 (4) |
O4···C3iv | 3.131 (3) | O8···C8vii | 3.257 (3) |
O4···C10v | 3.214 (3) | O8···N2iv | 3.351 (3) |
O4···C2 | 3.294 (3) | O8···C6iv | 3.467 (3) |
O4···C4iv | 3.369 (4) | C3···C10vii | 3.524 (4) |
| | | |
O1—Cl1—O2 | 110.9 (1) | C6—N2—H3 | 118.48 |
O1—Cl1—O3 | 109.9 (1) | C8—N3—H10 | 118.43 |
O1—Cl1—O4 | 109.1 (1) | C12—N3—H10 | 118.43 |
O2—Cl1—O3 | 108.7 (1) | N1—C1—H1 | 107.03 |
O2—Cl1—O4 | 110.2 (1) | N1—C1—H2 | 110.19 |
O3—Cl1—O4 | 108.0 (1) | C1i—C1—H1 | 111.66 |
O5—Cl2—O6 | 110.1 (1) | C1i—C1—H2 | 106.23 |
O5—Cl2—O7 | 109.9 (1) | H1—C1—H2 | 106.03 |
O5—Cl2—O8 | 109.1 (1) | N2—C2—H4 | 119.83 |
O6—Cl2—O7 | 109.8 (1) | C3—C2—H4 | 119.83 |
O6—Cl2—O8 | 109.6 (1) | C2—C3—H5 | 120.55 |
O7—Cl2—O8 | 108.3 (1) | C4—C3—H5 | 120.55 |
C1—N1—C7 | 112.1 (2) | C3—C4—H6 | 120.28 |
C1—N1—C13 | 113.7 (2) | C5—C4—H6 | 120.28 |
C7—N1—C13 | 111.8 (2) | C4—C5—H7 | 119.98 |
C2—N2—C6 | 123.0 (2) | C6—C5—H7 | 119.98 |
C8—N3—C12 | 123.1 (2) | N1—C7—H8 | 109.14 |
N1—C1—C1i | 115.3 (2) | N1—C7—H9 | 109.14 |
N2—C2—C3 | 120.3 (2) | C6—C7—H8 | 109.14 |
C2—C3—C4 | 118.9 (3) | C6—C7—H9 | 109.14 |
C3—C4—C5 | 119.4 (3) | H8—C7—H9 | 109.46 |
C4—C5—C6 | 120.0 (2) | N3—C8—H11 | 120.03 |
N2—C6—C5 | 118.2 (3) | C9—C8—H11 | 120.03 |
N2—C6—C7 | 116.1 (2) | C8—C9—H12 | 120.44 |
C5—C6—C7 | 125.6 (2) | C10—C9—H12 | 120.44 |
N1—C7—C6 | 110.8 (2) | C9—C10—H13 | 120.17 |
N3—C8—C9 | 119.9 (2) | C11—C10—H13 | 120.18 |
C8—C9—C10 | 119.1 (2) | C10—C11—H14 | 119.98 |
C9—C10—C11 | 119.7 (3) | C12—C11—H14 | 119.98 |
C10—C11—C12 | 120.0 (2) | N1—C13—H15 | 108.94 |
N3—C12—C11 | 118.1 (2) | N1—C13—H16 | 108.94 |
N3—C12—C13 | 117.3 (2) | C12—C13—H15 | 108.95 |
C11—C12—C13 | 124.6 (2) | C12—C13—H16 | 108.94 |
N1—C13—C12 | 111.6 (2) | H15—C13—H16 | 109.46 |
C2—N2—H3 | 118.48 | | |
| | | |
N1—C1—C1i—N1i | 180 | C2—N2—C6—C7 | −177.5 (2) |
N1—C7—C6—N2 | −36.3 (3) | C2—C3—C4—C5 | −0.5 (4) |
N1—C7—C6—C5 | 147.6 (3) | C3—C2—N2—C6 | 1.0 (4) |
N1—C13—C12—N3 | 59.6 (3) | C3—C4—C5—C6 | 0.5 (4) |
N1—C13—C12—C11 | −122.0 (3) | C4—C5—C6—C7 | 176.4 (2) |
N2—C2—C3—C4 | −0.2 (4) | C6—C7—N1—C13 | 153.6 (2) |
N2—C6—C5—C4 | 0.3 (4) | C7—N1—C13—C12 | −172.3 (2) |
N3—C8—C9—C10 | 0.7 (4) | C8—N3—C12—C11 | −2.2 (4) |
N3—C12—C11—C10 | 1.5 (4) | C8—N3—C12—C13 | 176.4 (2) |
C1—N1—C7—C6 | −77.4 (3) | C8—C9—C10—C11 | −1.3 (4) |
C1—N1—C13—C12 | 59.5 (3) | C9—C8—N3—C12 | 1.1 (4) |
C1i—C1—N1—C7 | −69.7 (3) | C9—C10—C11—C12 | 0.2 (4) |
C1i—C1—N1—C13 | 58.3 (3) | C10—C11—C12—C13 | −176.9 (2) |
C2—N2—C6—C5 | −1.1 (4) | | |
Symmetry codes: (i) −x+1, −y, −z; (ii) −x+2, −y+1, −z; (iii) x, y+1, z; (iv) −x+2, −y+1, −z+1; (v) −x+1, −y+1, −z; (vi) x, y+1, z+1; (vii) x, y, z+1; (viii) −x+1, −y+1, −z+1. |