3-Hydroxypyridine forms the title salt, C5H6NO+·C7H5O4-, with 2,5-dihydroxybenzoic acid. Hydrogen bonds in the crystal link the cation and the anion to form a hydrogen-bonded ribbon.
Supporting information
CCDC reference: 209919
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.003 Å
- R factor = 0.056
- wR factor = 0.179
- Data-to-parameter ratio = 15.6
checkCIF results
No syntax errors found
ADDSYM reports no extra symmetry
The crystals were grown by slow evaporation from an ethanol solution of 3-hydroxypyridine and 2,5-dihydroxybenzoic acid, with a molar ratio of 1:1.
All H atoms were located from difference Fourier maps and refined isotropically. Refined distances: C—H = 0.91 (3)–1.00 (2) Å, N—H = 0.99 (3) Å and O—H = 0.87 (4)–0.92 (3) Å.
Data collection: MSC/AFC Diffractometer Control Software
(Molecular Structure Corporation, 1990); cell refinement: MSC/AFC Diffractometer Control Software; data reduction: TEXSAN for Windows (Molecular Structure Corporation, 1997-1999); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: TEXSAN for Windows; software used to prepare material for publication: TEXSAN for Windows.
Crystal data top
C5H6NO+·C7H5O4− | F(000) = 520 |
Mr = 249.22 | Dx = 1.479 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 7.659 (2) Å | θ = 11.3–11.5° |
b = 7.1731 (17) Å | µ = 0.12 mm−1 |
c = 20.468 (4) Å | T = 298 K |
β = 95.454 (18)° | Plate, colorless |
V = 1119.4 (5) Å3 | 0.50 × 0.27 × 0.21 mm |
Z = 4 | |
Data collection top
Rigaku AFC-5R diffractometer | Rint = 0.031 |
Radiation source: Rigaku rotating anode | θmax = 30.0°, θmin = 2.7° |
Graphite monochromator | h = −1→10 |
ω–2θ scans | k = −1→10 |
4496 measured reflections | l = −28→28 |
3252 independent reflections | 3 standard reflections every 97 reflections |
1878 reflections with I > 2σ(I) | intensity decay: 2.3% |
Refinement top
Refinement on F2 | 0 constraints |
Least-squares matrix: full | All H-atom parameters refined |
R[F2 > 2σ(F2)] = 0.056 | Weighting scheme based on measured s.u.'s w = 1/[σ2(Fo) + 0.00203|Fo|2] |
wR(F2) = 0.179 | (Δ/σ)max = 0.001 |
S = 1.10 | Δρmax = 0.37 e Å−3 |
3252 reflections | Δρmin = −0.36 e Å−3 |
208 parameters | Extinction correction: Zachariasen (1967), equ(3) Acta Cryst.(1968) 24, p213. |
0 restraints | Extinction coefficient: 1.7 (3)E-6 |
Crystal data top
C5H6NO+·C7H5O4− | V = 1119.4 (5) Å3 |
Mr = 249.22 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.659 (2) Å | µ = 0.12 mm−1 |
b = 7.1731 (17) Å | T = 298 K |
c = 20.468 (4) Å | 0.50 × 0.27 × 0.21 mm |
β = 95.454 (18)° | |
Data collection top
Rigaku AFC-5R diffractometer | Rint = 0.031 |
4496 measured reflections | 3 standard reflections every 97 reflections |
3252 independent reflections | intensity decay: 2.3% |
1878 reflections with I > 2σ(I) | |
Refinement top
R[F2 > 2σ(F2)] = 0.056 | 0 restraints |
wR(F2) = 0.179 | All H-atom parameters refined |
S = 1.10 | Δρmax = 0.37 e Å−3 |
3252 reflections | Δρmin = −0.36 e Å−3 |
208 parameters | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.4951 (3) | 1.1583 (2) | 0.61801 (10) | 0.0619 (5) | |
O2 | 0.2621 (2) | 0.1928 (2) | 0.52261 (8) | 0.0585 (5) | |
O3 | 0.2599 (2) | 0.4962 (2) | 0.50114 (7) | 0.0513 (5) | |
O4 | 0.0893 (2) | 0.6228 (2) | 0.39858 (9) | 0.0546 (5) | |
O5 | −0.1000 (2) | −0.0975 (2) | 0.33037 (8) | 0.0549 (5) | |
N1 | 0.4441 (2) | 0.6629 (3) | 0.60081 (9) | 0.0387 (5) | |
C2 | 0.4276 (3) | 0.8440 (3) | 0.58707 (10) | 0.0388 (5) | |
C3 | 0.5064 (3) | 0.9755 (3) | 0.62988 (10) | 0.0404 (5) | |
C4 | 0.6014 (3) | 0.9113 (3) | 0.68671 (11) | 0.0435 (6) | |
C5 | 0.6149 (3) | 0.7233 (3) | 0.69940 (11) | 0.0443 (6) | |
C6 | 0.5358 (3) | 0.5985 (3) | 0.65547 (11) | 0.0431 (6) | |
C7 | 0.0973 (2) | 0.2951 (3) | 0.42658 (9) | 0.0322 (5) | |
C8 | 0.0433 (3) | 0.4427 (3) | 0.38454 (10) | 0.0358 (5) | |
C9 | −0.0555 (3) | 0.4051 (3) | 0.32527 (10) | 0.0404 (5) | |
C10 | −0.1008 (3) | 0.2249 (3) | 0.30804 (10) | 0.0398 (5) | |
C11 | −0.0497 (3) | 0.0777 (3) | 0.35006 (10) | 0.0371 (5) | |
C12 | 0.0484 (3) | 0.1147 (3) | 0.40892 (10) | 0.0354 (5) | |
C13 | 0.2143 (3) | 0.3294 (3) | 0.48844 (9) | 0.0371 (5) | |
H1 | 0.381 (3) | 0.577 (4) | 0.5691 (13) | 0.053 (7)* | |
H2 | 0.358 (3) | 0.881 (3) | 0.5457 (11) | 0.039 (6)* | |
H3 | 0.412 (4) | 1.184 (4) | 0.5847 (15) | 0.072 (8)* | |
H4 | 0.660 (3) | 0.999 (4) | 0.7144 (13) | 0.054 (7)* | |
H5 | 0.685 (3) | 0.676 (4) | 0.7393 (13) | 0.057 (7)* | |
H6 | 0.543 (3) | 0.472 (4) | 0.6596 (12) | 0.055 (7)* | |
H7 | 0.152 (4) | 0.619 (4) | 0.4392 (15) | 0.072 (8)* | |
H8 | −0.094 (4) | 0.505 (5) | 0.2961 (14) | 0.070 (8)* | |
H9 | −0.173 (3) | 0.198 (3) | 0.2656 (11) | 0.040 (6)* | |
H10 | −0.044 (4) | −0.171 (4) | 0.3587 (15) | 0.067 (8)* | |
H11 | 0.085 (3) | 0.017 (3) | 0.4374 (11) | 0.038 (5)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0763 (12) | 0.0317 (9) | 0.0698 (12) | −0.0054 (8) | −0.0349 (10) | 0.0013 (8) |
O2 | 0.0811 (12) | 0.0392 (9) | 0.0483 (9) | −0.0009 (8) | −0.0300 (8) | 0.0067 (7) |
O3 | 0.0667 (11) | 0.0344 (9) | 0.0480 (9) | −0.0033 (7) | −0.0198 (8) | −0.0060 (7) |
O4 | 0.0710 (11) | 0.0253 (8) | 0.0608 (11) | −0.0023 (7) | −0.0286 (9) | 0.0020 (7) |
O5 | 0.0788 (12) | 0.0304 (8) | 0.0492 (10) | −0.0051 (8) | −0.0267 (8) | −0.0025 (7) |
N1 | 0.0436 (10) | 0.0324 (9) | 0.0381 (9) | −0.0006 (7) | −0.0064 (7) | −0.0054 (7) |
C2 | 0.0443 (11) | 0.0341 (11) | 0.0353 (10) | −0.0007 (9) | −0.0106 (9) | −0.0010 (8) |
C3 | 0.0417 (11) | 0.0324 (10) | 0.0444 (11) | −0.0018 (8) | −0.0091 (9) | −0.0025 (9) |
C4 | 0.0447 (12) | 0.0414 (12) | 0.0407 (11) | 0.0002 (9) | −0.0153 (9) | −0.0084 (9) |
C5 | 0.0475 (12) | 0.0458 (12) | 0.0368 (11) | 0.0057 (10) | −0.0099 (9) | −0.0007 (9) |
C6 | 0.0484 (12) | 0.0338 (11) | 0.0453 (12) | 0.0042 (9) | −0.0050 (9) | −0.0003 (9) |
C7 | 0.0376 (10) | 0.0273 (9) | 0.0305 (9) | 0.0022 (7) | −0.0035 (8) | 0.0000 (7) |
C8 | 0.0396 (10) | 0.0249 (10) | 0.0407 (11) | 0.0015 (8) | −0.0078 (8) | 0.0004 (8) |
C9 | 0.0455 (11) | 0.0329 (10) | 0.0398 (11) | 0.0025 (9) | −0.0117 (9) | 0.0066 (9) |
C10 | 0.0423 (11) | 0.0377 (11) | 0.0365 (10) | −0.0004 (9) | −0.0116 (8) | 0.0020 (9) |
C11 | 0.0432 (11) | 0.0282 (9) | 0.0379 (10) | 0.0011 (8) | −0.0061 (8) | −0.0028 (8) |
C12 | 0.0424 (11) | 0.0279 (10) | 0.0341 (10) | 0.0010 (8) | −0.0053 (8) | 0.0028 (8) |
C13 | 0.0437 (11) | 0.0328 (10) | 0.0326 (10) | 0.0024 (8) | −0.0073 (8) | −0.0032 (8) |
Geometric parameters (Å, º) top
O1—C3 | 1.334 (3) | C4—H4 | 0.93 (3) |
O1—H3 | 0.90 (3) | C5—C6 | 1.369 (3) |
O2—C13 | 1.239 (3) | C5—H5 | 0.99 (3) |
O3—C13 | 1.267 (3) | C6—H6 | 0.91 (3) |
O4—C8 | 1.363 (3) | C7—C8 | 1.402 (3) |
O4—H7 | 0.92 (3) | C7—C12 | 1.386 (3) |
O5—C11 | 1.364 (3) | C7—C13 | 1.500 (3) |
O5—H10 | 0.87 (4) | C8—C9 | 1.393 (3) |
N1—C2 | 1.332 (3) | C9—C10 | 1.376 (3) |
N1—C6 | 1.345 (3) | C9—H8 | 0.96 (3) |
N1—H1 | 0.99 (3) | C10—C11 | 1.394 (3) |
C2—C3 | 1.387 (3) | C10—H9 | 1.00 (2) |
C2—H2 | 0.99 (2) | C11—C12 | 1.383 (3) |
C3—C4 | 1.391 (3) | C12—H11 | 0.94 (2) |
C4—C5 | 1.375 (3) | | |
| | | |
O2···C3i | 3.158 (3) | C2···C11iii | 3.325 (3) |
O3···H2 | 2.98 (2) | C6···C8ii | 3.414 (3) |
O3···H3i | 2.99 (3) | C8···H10iv | 2.89 (3) |
O3···C2 | 3.246 (3) | C13···H3i | 2.59 (3) |
N1···C13ii | 3.331 (3) | C13···H1 | 2.67 (3) |
| | | |
C3—O1—H3 | 111 (2) | C8—C7—C12 | 119.23 (18) |
C8—O4—H7 | 105 (2) | C8—C7—C13 | 120.82 (18) |
C11—O5—H10 | 105 (2) | C12—C7—C13 | 119.88 (18) |
C2—N1—C6 | 122.8 (2) | O4—C8—C7 | 122.07 (18) |
C2—N1—H1 | 115.8 (16) | O4—C8—C9 | 118.37 (18) |
C6—N1—H1 | 121.3 (16) | C7—C8—C9 | 119.51 (18) |
N1—C2—C3 | 120.22 (19) | C8—C9—C10 | 120.52 (19) |
N1—C2—H2 | 118.4 (14) | C8—C9—H8 | 120.3 (18) |
C3—C2—H2 | 121.4 (14) | C10—C9—H8 | 119.1 (18) |
O1—C3—C2 | 122.5 (2) | C9—C10—C11 | 120.28 (19) |
O1—C3—C4 | 119.8 (2) | C9—C10—H9 | 120.6 (14) |
C2—C3—C4 | 117.7 (2) | C11—C10—H9 | 119.1 (14) |
C3—C4—C5 | 120.5 (2) | O5—C11—C10 | 117.43 (19) |
C3—C4—H4 | 117.8 (17) | O5—C11—C12 | 123.28 (19) |
C5—C4—H4 | 121.6 (17) | C10—C11—C12 | 119.29 (19) |
C4—C5—C6 | 119.8 (2) | C7—C12—C11 | 121.16 (18) |
C4—C5—H5 | 121.1 (16) | C7—C12—H11 | 118.6 (15) |
C6—C5—H5 | 119.1 (16) | C11—C12—H11 | 120.2 (15) |
N1—C6—C5 | 119.0 (2) | O2—C13—O3 | 124.78 (19) |
N1—C6—H6 | 116.1 (18) | O2—C13—C7 | 117.88 (18) |
C5—C6—H6 | 124.9 (18) | O3—C13—C7 | 117.33 (18) |
| | | |
O1—C3—C2—N1 | 179.3 (2) | C2—N1—C6—C5 | 0.5 (4) |
O1—C3—C4—C5 | −179.6 (2) | C2—C3—C4—C5 | −0.2 (4) |
O2—C13—C7—C8 | −177.8 (2) | C3—C2—N1—C6 | −0.1 (4) |
O2—C13—C7—C12 | −0.9 (3) | C3—C4—C5—C6 | 0.6 (4) |
O3—C13—C7—C8 | 0.7 (3) | C7—C8—C9—C10 | 0.4 (4) |
O3—C13—C7—C12 | 177.6 (2) | C7—C12—C11—C10 | −0.4 (4) |
O4—C8—C7—C12 | −178.9 (2) | C8—C7—C12—C11 | 1.3 (3) |
O4—C8—C7—C13 | −2.0 (3) | C8—C9—C10—C11 | 0.6 (4) |
O4—C8—C9—C10 | 178.1 (2) | C9—C8—C7—C12 | −1.3 (3) |
O5—C11—C10—C9 | 179.5 (2) | C9—C8—C7—C13 | 175.7 (2) |
O5—C11—C12—C7 | 179.5 (2) | C9—C10—C11—C12 | −0.6 (4) |
N1—C2—C3—C4 | −0.1 (4) | C11—C12—C7—C13 | −175.7 (2) |
N1—C6—C5—C4 | −0.8 (4) | | |
Symmetry codes: (i) x, y−1, z; (ii) −x+1, −y+1, −z+1; (iii) −x, −y+1, −z+1; (iv) x, y+1, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H3···O2iv | 0.90 (3) | 1.63 (4) | 2.530 (2) | 171 (3) |
O4—H7···O3 | 0.92 (3) | 1.70 (3) | 2.533 (2) | 150 (3) |
O5—H10···O4i | 0.87 (4) | 1.93 (4) | 2.773 (3) | 163 (3) |
N1—H1···O3 | 0.99 (3) | 1.70 (3) | 2.652 (2) | 161 (2) |
C2—H2···O2iv | 0.99 (2) | 2.39 (2) | 3.048 (3) | 123 (2) |
C5—H5···O5v | 0.99 (3) | 2.43 (3) | 3.414 (3) | 169 (2) |
C6—H6···O1i | 0.91 (3) | 2.42 (3) | 3.257 (3) | 152 (2) |
Symmetry codes: (i) x, y−1, z; (iv) x, y+1, z; (v) x+1, −y+1/2, z+1/2. |
Experimental details
Crystal data |
Chemical formula | C5H6NO+·C7H5O4− |
Mr | 249.22 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 7.659 (2), 7.1731 (17), 20.468 (4) |
β (°) | 95.454 (18) |
V (Å3) | 1119.4 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.50 × 0.27 × 0.21 |
|
Data collection |
Diffractometer | Rigaku AFC-5R diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4496, 3252, 1878 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.703 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.179, 1.10 |
No. of reflections | 3252 |
No. of parameters | 208 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.37, −0.36 |
Selected geometric parameters (Å, º) topO1—C3 | 1.334 (3) | C4—C5 | 1.375 (3) |
O2—C13 | 1.239 (3) | C5—C6 | 1.369 (3) |
O3—C13 | 1.267 (3) | C7—C8 | 1.402 (3) |
O4—C8 | 1.363 (3) | C7—C12 | 1.386 (3) |
O5—C11 | 1.364 (3) | C7—C13 | 1.500 (3) |
N1—C2 | 1.332 (3) | C8—C9 | 1.393 (3) |
N1—C6 | 1.345 (3) | C9—C10 | 1.376 (3) |
C2—C3 | 1.387 (3) | C10—C11 | 1.394 (3) |
C3—C4 | 1.391 (3) | C11—C12 | 1.383 (3) |
| | | |
O1—C3—C2 | 122.5 (2) | O5—C11—C10 | 117.43 (19) |
O1—C3—C4 | 119.8 (2) | O5—C11—C12 | 123.28 (19) |
C8—C7—C13 | 120.82 (18) | O2—C13—O3 | 124.78 (19) |
C12—C7—C13 | 119.88 (18) | O2—C13—C7 | 117.88 (18) |
O4—C8—C7 | 122.07 (18) | O3—C13—C7 | 117.33 (18) |
O4—C8—C9 | 118.37 (18) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H3···O2i | 0.90 (3) | 1.63 (4) | 2.530 (2) | 171 (3) |
O4—H7···O3 | 0.92 (3) | 1.70 (3) | 2.533 (2) | 150 (3) |
O5—H10···O4ii | 0.87 (4) | 1.93 (4) | 2.773 (3) | 163 (3) |
N1—H1···O3 | 0.99 (3) | 1.70 (3) | 2.652 (2) | 161 (2) |
C2—H2···O2i | 0.99 (2) | 2.39 (2) | 3.048 (3) | 123.3 (16) |
C5—H5···O5iii | 0.99 (3) | 2.43 (3) | 3.414 (3) | 169.2 (19) |
C6—H6···O1ii | 0.91 (3) | 2.42 (3) | 3.257 (3) | 152 (2) |
Symmetry codes: (i) x, y+1, z; (ii) x, y−1, z; (iii) x+1, −y+1/2, z+1/2. |
The title compound, (I), was investigated as part of a study on D—H···A hydrogen bonding (D = N, O or C; A = N or O) in carboxylic acid and pyridine systems (Kashino et al., 2001; Ishida et al., 2001, 2002). 2,5-Dihydroxybenzoic acid is of potential interest in crystal engineering to form specific two- or three-dimensional aggregates with organic bases because the carboxyl and two hydroxyl groups of the acid may act as hydrogen-bond donors, as well as acceptors. The crystal structure of 2,5-dihydroxybenzoic acid itself was determined by Haisa et al. (1982), who showed dimorphs of the compound grown by two different solvents. We have found only one example (Aakeröy et al., 1995) of a structure containing the 2,5-dihydroxybenzoic acid moiety in the Cambridge Structural Database (Version 5.24 of November 2002; Allen, 2002), but no crystal data for compounds composed of 2,5-dihydroxybenzoic acid and pyridine derivatives are recorded.
In the title crystal, the 3-hydroxypyridinium cation and the 2,5-dihydroxybenzoate anion are held together by an N—H···O hydrogen bond (Table 2), forming the C5H6NO+·C7H5O4− unit (Fig. 1). An intramolecular hydrogen bond, O4—H7···O3, is observed in the unit. The units are linked by O—H···O hydrogen bonds, viz. O1—H3···O2i between the cation and anion, and O5—H10···O4ii between the anions, to form a hydrogen-bonded ribbon running along the b axis [Fig. 2; symmetry codes: (i) x, 1 + y, z; (ii) x, y − 1, z]. The dihedral angle between the planes of benzene and pyridine rings is 3.96 (10)°. Furthermore, C—H···O hydrogen bonds (C2—H2···O2i and C6—H6···O1ii) are formed in the ribbon. These hydrogen bonds play an important role and form a flat plane of the molecular ribbon. A C—H···O hydrogen bond, C5—H5···O5iii [symmetry code: (iii) 1 + x, 1/2 − y, 1/2 + z], connects the ribbons to form a two-dimensional hydrogen-bonded network. These planes are stacked along the [102] direction by a π–π-stacking interaction between the pyridine and benzene rings. This interplanar separation and the centroid offset are 3.370 (19) and 2.11 (2) Å, respectively.