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In the title compound, [Cd(C9H6O5)(C10H8N2)(H2O)]n, the CdII atom is coordinated in a distorted octa­hedral fashion by two carboxyl­ate groups (one in a monodentate and one in a bidentate fashion) from two 4-carboxyl­ato­phenoxy­acetate anions, two N atoms from a 2,2'-bipyridine ligand and one aqua ligand. The structure is a helix with a long pitch of 16.441 (5) Å. A three-dimensional supra­molecular network is further constructed through [pi]-[pi] stacking and hydrogen-bonding inter­actions between the helices.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270106026783/ob3012sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270106026783/ob3012Isup2.hkl
Contains datablock I

CCDC reference: 600937

Comment top

It has been noted that employment of flexible or V-shaped exo-bidentate organic bridges can improve the helicity of polymeric chains (Ye et al., 2005). Therefore, we assumed that the 4-carboxylatophenoxyacetate (cpoa2-) anion, as a multidentate ligand with two different carboxylate groups, one at a flexible site, may be useful in the formation of single-stranded helical chains in the presence of aromatic chelate ligands, such as 2,2'-bipyridine (2,2'-bipy) and 1,10-phenanthroline (phen). These aromatic chelate ligands are important in maintaining the one-dimensionality and may provide potential supramolecular recognition sites for ππ stacking interaction (Chen et al., 2002; Zhang et al., 2004) to form multi-stranded helices. Using 4-carboxyphenoxyacetic acid (H2cpoa) and 2,2'-bipy, we have hydrothermally prepared the title compound, (I), namely [Cd(cpoa)(2,2'-bipy)(H2O)]n, which is a new neutral infinite CdII dicarboxylate helical coordination polymer. The structure is reported in this paper.

The asymmetric unit of (I) contains one CdII atom, one cpoa2- ligand, one 2,2'-bipy ligand and one water molecule (Fig. 1). The Cd atom is coordinated by three O atoms from one monodentate and one 1,3-bidentate cpoa ligands, the aqua ligand and two N atoms from the 2,2'-bipy ligand to furnish a distorted octahedral geometry. The Cd1—O3i and Cd1—O4i bond distances are longer than the Cd1—O1 bond (see Table 1 for distances and symmetry codes). Each pair of adjacent CdII atoms are bridged by cpoa2- ligands to form a chiral helical chain running along the 21 axis in the c direction with a pitch of 16.441 (5) Å; this is longer than the pitch of 11.25 (1) Å in [Cu(ipa)(2,2'-bipy)]n.2nH2O (H2ipa is isophthalic acid; Chen et al., 2002) because the cpoa2- dianion is larger than the ipa2- dianion. These chains are decorated with 2,2'-bipy ligands, positioned alternately on two sides and pointing in outwards, as depicted in Fig. 2. The benzene rings of the cpoa2- ions at each side of the helix are arranged in a parallel fashion, with a vertical inter-ring distance of 5.04 (1) Å; adjacent chiral helices are connected into a two-dimensional network through hydrogen bonds involving aqua ligands (Table 2 and Fig. 3). The two-dimensional network is extended into a three-dimensional supramolecular network by ππ stacking through intercalation of the 2,2'-bipy rings (the face-to-face distance is 3.42 (1) Å; Fig. 4)

Experimental top

2,2'-Bipyridine (0.157 g, 1 mmol) and cadmium nitrate (0.308 g, 1 mmol) were dissolved in a hot aqueous solution of 4-carboxyphenoxyacetic acid (0.196 g, 1 mmol) and the pH of the solution was adjusted to 6 with triethylamine. The solution was sealed in a 15 ml Teflon-lined stainless steel bomb and held at 413 K for 96 h. The bomb was then cooled naturally to room temperature. Colorless prismatic crystals were filtered off, washed with water and dried at room temperature (yield 58%).

Refinement top

The water H atoms were located from difference Fourier maps and refined freely. All other H atoms were positioned geometrically and refined with a riding model, with distances 0.97 (CH2) or 0.93 (aromatic) Å, and with Uiso(H) = 1.2 Ueq(C).

Computing details top

Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97.

Figures top
[Figure 1] Fig. 1. A view of (I), showing 30% probability displacement ellipsoids. [Symmetry code: (i) -x + 1/2, -y + 1, z - 1/2.]
[Figure 2] Fig. 2. A chiral helical chain of (I).
[Figure 3] Fig. 3. The two-dimensional layer of (I), formed through hydrogen bonds (dashed lines). H atoms have been omitted.
[Figure 4] Fig. 4. The three-dimensional network of (I), formed through hydrogen bonds and ππ stacking. H atoms have been omitted.
catena-Poly[[aqua(2,2'-bipyridine-κ2N,N')cadmium(II)]-µ-4- carboxylatophenoxyacetato-κ3O,O':O''] top
Crystal data top
[Cd(C9H6O5)(C10H8N2)(H2O)]F(000) = 960
Mr = 480.74Dx = 1.804 Mg m3
OrthorhombicP212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 947 reflections
a = 6.799 (2) Åθ = 2.5–26.8°
b = 15.834 (5) ŵ = 1.28 mm1
c = 16.441 (5) ÅT = 293 K
V = 1769.9 (9) Å3Prism, colorless
Z = 40.37 × 0.21 × 0.17 mm
Data collection top
Bruker APEX area-detector
diffractometer
3866 independent reflections
Radiation source: fine-focus sealed tube3417 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
φ and ω scansθmax = 27.1°, θmin = 2.5°
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
h = 88
Tmin = 0.650, Tmax = 0.812k = 2012
10675 measured reflectionsl = 1921
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.026H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.050 w = 1/[σ2(Fo2) + (0.0231P)2]
where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
3866 reflectionsΔρmax = 0.56 e Å3
262 parametersΔρmin = 0.27 e Å3
0 restraintsAbsolute structure: Flack (1983), 1617 Friedel pairs
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: 0.36 (2)
Crystal data top
[Cd(C9H6O5)(C10H8N2)(H2O)]V = 1769.9 (9) Å3
Mr = 480.74Z = 4
OrthorhombicP212121Mo Kα radiation
a = 6.799 (2) ŵ = 1.28 mm1
b = 15.834 (5) ÅT = 293 K
c = 16.441 (5) Å0.37 × 0.21 × 0.17 mm
Data collection top
Bruker APEX area-detector
diffractometer
3866 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
3417 reflections with I > 2σ(I)
Tmin = 0.650, Tmax = 0.812Rint = 0.028
10675 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.026H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.050Δρmax = 0.56 e Å3
S = 1.06Δρmin = 0.27 e Å3
3866 reflectionsAbsolute structure: Flack (1983), 1617 Friedel pairs
262 parametersAbsolute structure parameter: 0.36 (2)
0 restraints
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Cd10.79697 (3)0.597549 (13)0.340650 (12)0.03146 (6)
O10.7358 (3)0.46184 (13)0.35751 (14)0.0454 (6)
O20.4563 (4)0.50229 (15)0.41487 (13)0.0492 (6)
O30.0214 (3)0.36815 (15)0.77036 (12)0.0426 (6)
O40.2507 (3)0.39258 (15)0.70274 (12)0.0424 (6)
O1W1.1313 (4)0.56505 (18)0.33104 (18)0.0469 (6)
H1A1.226 (6)0.597 (2)0.310 (2)0.064 (13)*
H1B1.194 (6)0.537 (2)0.358 (2)0.054 (13)*
N10.8241 (4)0.63920 (15)0.47599 (14)0.0360 (6)
N20.8478 (3)0.74367 (14)0.34756 (15)0.0330 (6)
C10.8248 (6)0.5843 (2)0.53766 (19)0.0506 (9)
H10.81460.52710.52580.061*
C20.8401 (5)0.6083 (3)0.61783 (19)0.0541 (10)
H20.83980.56850.65940.065*
C30.8556 (5)0.6928 (2)0.63458 (19)0.0530 (10)
H30.86480.71110.68820.064*
C40.8576 (5)0.7501 (2)0.57218 (18)0.0408 (8)
H40.86850.80760.58300.049*
C50.8433 (4)0.7215 (2)0.49240 (17)0.0327 (7)
C60.8474 (4)0.7801 (2)0.42158 (17)0.0321 (7)
C70.8513 (5)0.8670 (2)0.4300 (2)0.0485 (10)
H70.84750.89160.48130.058*
C80.8611 (6)0.9168 (2)0.3606 (2)0.0644 (12)
H80.86510.97530.36520.077*
C90.8647 (6)0.8797 (2)0.2862 (2)0.0601 (12)
H90.87280.91220.23920.072*
C100.8561 (5)0.7933 (2)0.2819 (2)0.0456 (9)
H100.85610.76800.23080.055*
C110.5668 (5)0.4486 (2)0.38684 (18)0.0322 (7)
C120.5068 (5)0.3567 (2)0.38631 (19)0.0359 (8)
H12A0.54170.33240.33410.043*
H12B0.58120.32700.42780.043*
O50.3036 (4)0.34298 (14)0.40022 (11)0.0410 (5)
C140.2279 (5)0.35086 (17)0.47679 (16)0.0297 (7)
C150.3360 (5)0.3502 (2)0.54816 (18)0.0397 (8)
H150.47220.34500.54670.048*
C160.2384 (4)0.35730 (19)0.62191 (17)0.0363 (8)
H160.31080.35640.66990.044*
C170.0369 (5)0.36572 (18)0.62600 (16)0.0289 (6)
C180.0660 (5)0.3652 (2)0.55345 (18)0.0383 (8)
H180.20220.37050.55450.046*
C190.0275 (5)0.3573 (2)0.48011 (19)0.0403 (8)
H190.04560.35620.43230.048*
C200.0700 (5)0.37613 (18)0.70540 (18)0.0316 (7)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cd10.03449 (11)0.03069 (10)0.02921 (9)0.00025 (10)0.00330 (10)0.00314 (10)
O10.0328 (15)0.0373 (12)0.0662 (15)0.0056 (9)0.0021 (10)0.0105 (11)
O20.0561 (17)0.0392 (15)0.0524 (15)0.0083 (12)0.0002 (12)0.0029 (12)
O30.0401 (14)0.0576 (16)0.0300 (12)0.0067 (11)0.0015 (10)0.0014 (10)
O40.0367 (16)0.0557 (14)0.0347 (10)0.0067 (11)0.0093 (8)0.0055 (11)
O1W0.0284 (13)0.0531 (15)0.0593 (16)0.0020 (12)0.0008 (13)0.0071 (13)
N10.0435 (18)0.0360 (14)0.0285 (12)0.0020 (13)0.0005 (13)0.0011 (11)
N20.0352 (16)0.0325 (12)0.0313 (12)0.0019 (10)0.0072 (12)0.0006 (11)
C10.065 (3)0.046 (2)0.0416 (18)0.001 (2)0.0017 (17)0.0054 (15)
C20.060 (3)0.067 (3)0.0351 (17)0.007 (2)0.0047 (15)0.0104 (18)
C30.044 (2)0.084 (3)0.0317 (17)0.0041 (19)0.0006 (13)0.0084 (17)
C40.036 (2)0.051 (2)0.0362 (17)0.0013 (15)0.0021 (13)0.0090 (15)
C50.0239 (18)0.0404 (18)0.0337 (15)0.0011 (13)0.0018 (11)0.0076 (13)
C60.0275 (19)0.0307 (16)0.0380 (16)0.0006 (12)0.0053 (12)0.0049 (13)
C70.057 (3)0.0357 (19)0.053 (2)0.0014 (17)0.0136 (18)0.0110 (17)
C80.084 (3)0.026 (2)0.083 (3)0.0039 (17)0.020 (2)0.0024 (18)
C90.082 (3)0.038 (2)0.061 (2)0.0103 (18)0.024 (2)0.0173 (18)
C100.053 (2)0.042 (2)0.0414 (18)0.0047 (17)0.0123 (15)0.0041 (16)
C110.0327 (19)0.0320 (18)0.0318 (16)0.0018 (14)0.0082 (14)0.0029 (14)
C120.0333 (19)0.040 (2)0.0342 (16)0.0025 (15)0.0083 (14)0.0041 (15)
O50.0350 (12)0.0559 (14)0.0320 (10)0.0122 (13)0.0067 (11)0.0093 (9)
C140.0296 (19)0.0304 (15)0.0292 (13)0.0069 (13)0.0050 (13)0.0029 (12)
C150.026 (2)0.054 (2)0.0391 (17)0.0037 (15)0.0003 (13)0.0074 (15)
C160.034 (2)0.0460 (19)0.0289 (14)0.0039 (14)0.0034 (13)0.0014 (13)
C170.0333 (18)0.0228 (15)0.0307 (14)0.0023 (13)0.0018 (13)0.0022 (12)
C180.0229 (18)0.053 (2)0.0394 (17)0.0033 (15)0.0004 (14)0.0041 (15)
C190.038 (2)0.052 (2)0.0309 (15)0.0028 (16)0.0042 (14)0.0028 (16)
C200.036 (2)0.0254 (16)0.0335 (16)0.0055 (13)0.0067 (14)0.0003 (12)
Geometric parameters (Å, º) top
Cd1—O12.206 (2)C5—C61.490 (4)
Cd1—O4i2.295 (2)C6—C71.383 (4)
Cd1—N12.328 (2)C7—C81.388 (5)
Cd1—O1W2.336 (3)C7—H70.9300
Cd1—N22.342 (2)C8—C91.357 (6)
Cd1—O3i2.513 (2)C8—H80.9300
O1—C111.264 (4)C9—C101.372 (5)
O2—C111.225 (4)C9—H90.9300
O3—C201.242 (4)C10—H100.9300
O3—Cd1ii2.513 (2)C11—C121.512 (4)
O4—C201.256 (4)C12—O51.417 (4)
O4—Cd1ii2.295 (2)C12—H12A0.9700
O1W—H1A0.89 (4)C12—H12B0.9700
O1W—H1B0.76 (4)O5—C141.366 (3)
N1—C11.335 (4)C14—C191.367 (4)
N1—C51.336 (4)C14—C151.384 (4)
N2—C101.337 (4)C15—C161.387 (4)
N2—C61.347 (4)C15—H150.9300
C1—C21.376 (5)C16—C171.378 (5)
C1—H10.9300C16—H160.9300
C2—C31.369 (5)C17—C181.383 (4)
C2—H20.9300C17—C201.503 (4)
C3—C41.370 (5)C18—C191.369 (4)
C3—H30.9300C18—H180.9300
C4—C51.392 (4)C19—H190.9300
C4—H40.9300C20—Cd1ii2.739 (3)
O1—Cd1—O4i99.5 (1)C6—C7—H7120.5
O1—Cd1—N199.8 (1)C8—C7—H7120.5
O4i—Cd1—N1159.4 (1)C9—C8—C7119.7 (3)
O1—Cd1—O1W88.7 (1)C9—C8—H8120.1
O4i—Cd1—O1W94.7 (1)C7—C8—H8120.1
N1—Cd1—O1W92.86 (10)C8—C9—C10118.5 (3)
O1—Cd1—N2169.70 (9)C8—C9—H9120.7
O4i—Cd1—N290.05 (8)C10—C9—H9120.7
N1—Cd1—N270.25 (9)N2—C10—C9123.1 (3)
O1W—Cd1—N294.43 (9)N2—C10—H10118.5
O1—Cd1—O3i96.09 (8)C9—C10—H10118.5
O4i—Cd1—O3i54.03 (7)O2—C11—O1125.9 (3)
N1—Cd1—O3i116.52 (9)O2—C11—C12120.4 (3)
O1W—Cd1—O3i148.72 (9)O1—C11—C12113.8 (3)
N2—Cd1—O3i86.33 (8)O5—C12—C11114.2 (3)
C11—O1—Cd1112.4 (2)O5—C12—H12A108.7
C20—O3—Cd1ii86.72 (19)C11—C12—H12A108.7
C20—O4—Cd1ii96.54 (18)O5—C12—H12B108.7
Cd1—O1W—H1A127 (2)C11—C12—H12B108.7
Cd1—O1W—H1B130 (3)H12A—C12—H12B107.6
H1A—O1W—H1B99 (4)C14—O5—C12120.1 (2)
C1—N1—C5118.7 (3)O5—C14—C19114.8 (3)
C1—N1—Cd1122.8 (2)O5—C14—C15125.5 (3)
C5—N1—Cd1118.47 (19)C19—C14—C15119.7 (3)
C10—N2—C6118.6 (3)C14—C15—C16119.1 (3)
C10—N2—Cd1123.2 (2)C14—C15—H15120.4
C6—N2—Cd1117.82 (19)C16—C15—H15120.4
N1—C1—C2123.2 (3)C17—C16—C15121.7 (3)
N1—C1—H1118.4C17—C16—H16119.1
C2—C1—H1118.4C15—C16—H16119.1
C3—C2—C1117.9 (3)C16—C17—C18117.4 (3)
C3—C2—H2121.0C16—C17—C20122.3 (3)
C1—C2—H2121.0C18—C17—C20120.3 (3)
C2—C3—C4119.8 (3)C19—C18—C17121.7 (3)
C2—C3—H3120.1C19—C18—H18119.1
C4—C3—H3120.1C17—C18—H18119.1
C3—C4—C5119.3 (3)C14—C19—C18120.3 (3)
C3—C4—H4120.4C14—C19—H19119.8
C5—C4—H4120.4C18—C19—H19119.8
N1—C5—C4121.0 (3)O3—C20—O4122.7 (3)
N1—C5—C6116.8 (2)O3—C20—C17119.6 (3)
C4—C5—C6122.2 (3)O4—C20—C17117.7 (3)
N2—C6—C7121.1 (3)O3—C20—Cd1ii66.36 (16)
N2—C6—C5116.1 (3)O4—C20—Cd1ii56.35 (15)
C7—C6—C5122.8 (3)C17—C20—Cd1ii173.9 (2)
C6—C7—C8119.0 (3)
Symmetry codes: (i) x+1/2, y+1, z1/2; (ii) x+1/2, y+1, z+1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1W—H1A···O3iii0.89 (4)1.92 (4)2.773 (3)161 (3)
O1W—H1B···O2iv0.76 (4)2.09 (4)2.787 (4)154 (4)
Symmetry codes: (iii) x+3/2, y+1, z1/2; (iv) x+1, y, z.

Experimental details

Crystal data
Chemical formula[Cd(C9H6O5)(C10H8N2)(H2O)]
Mr480.74
Crystal system, space groupOrthorhombicP212121
Temperature (K)293
a, b, c (Å)6.799 (2), 15.834 (5), 16.441 (5)
V3)1769.9 (9)
Z4
Radiation typeMo Kα
µ (mm1)1.28
Crystal size (mm)0.37 × 0.21 × 0.17
Data collection
DiffractometerBruker APEX area-detector
diffractometer
Absorption correctionMulti-scan
(SADABS; Sheldrick, 1996)
Tmin, Tmax0.650, 0.812
No. of measured, independent and
observed [I > 2σ(I)] reflections
10675, 3866, 3417
Rint0.028
(sin θ/λ)max1)0.641
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.026, 0.050, 1.06
No. of reflections3866
No. of parameters262
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.56, 0.27
Absolute structureFlack (1983), 1617 Friedel pairs
Absolute structure parameter0.36 (2)

Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEPII (Johnson, 1976), SHELXL97.

Selected geometric parameters (Å, º) top
Cd1—O12.206 (2)Cd1—O1W2.336 (3)
Cd1—O4i2.295 (2)Cd1—N22.342 (2)
Cd1—N12.328 (2)Cd1—O3i2.513 (2)
O1—Cd1—O4i99.5 (1)N1—Cd1—N270.25 (9)
O1—Cd1—N199.8 (1)O1W—Cd1—N294.43 (9)
O4i—Cd1—N1159.4 (1)O1—Cd1—O3i96.09 (8)
O1—Cd1—O1W88.7 (1)O4i—Cd1—O3i54.03 (7)
O4i—Cd1—O1W94.7 (1)N1—Cd1—O3i116.52 (9)
N1—Cd1—O1W92.86 (10)O1W—Cd1—O3i148.72 (9)
O1—Cd1—N2169.70 (9)N2—Cd1—O3i86.33 (8)
O4i—Cd1—N290.05 (8)
Symmetry code: (i) x+1/2, y+1, z1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1W—H1A···O3ii0.89 (4)1.92 (4)2.773 (3)161 (3)
O1W—H1B···O2iii0.76 (4)2.09 (4)2.787 (4)154 (4)
Symmetry codes: (ii) x+3/2, y+1, z1/2; (iii) x+1, y, z.
 

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