From a solution of [Zn(H2O)6](NO3)2 and acetylenedicarboxylic acid in deionized water, single crystals of zinc acetylenedicarboxylate dihydrate, {[Zn(C4O4)(H2O)2]}n, were obtained by slow evaporation of the solvent. The asymmetric unit consits of one zinc cation which is located on a centre of symmetry, half of an acetylenedicarboxylate anion, the anion lying on a twofold axis, and one water molecule in a general position. Thus, zinc is octahedrally coordinated by four O atoms of acetylenedicarboxylate anions and two water molecules in trans positions. These octahedra are connected by dicarboxylate ligands into a three-dimensional network.
Supporting information
CCDC reference: 293959
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.007 Å
- R factor = 0.042
- wR factor = 0.091
- Data-to-parameter ratio = 14.2
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT341_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 7
PLAT371_ALERT_2_C Long C(sp2)-C(sp1) Bond C1 - C2 ... 1.46 Ang.
PLAT731_ALERT_1_C Bond Calc 0.82(6), Rep 0.82(2) ...... 3.00 su-Rat
O3 -H1 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.82(6), Rep 0.82(2) ...... 3.00 su-Rat
O3 -H1 1.555 1.555
PLAT736_ALERT_1_C H...A Calc 2.06(6), Rep 2.06(2) ...... 3.00 su-Rat
H1 -O2 1.555 2.555
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
5 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: X-AREA (Stoe & Cie, 2001); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: DIAMOND (Brandenburg, 2001); software used to prepare material for publication: SHELXL97.
Poly[diaqua-µ
4-acetylenedicarboxylato-zinc(II)]
top
Crystal data top
[Zn(C4O4)(H2O)2] | F(000) = 424 |
Mr = 213.44 | Dx = 2.301 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 2482 reflections |
a = 13.245 (3) Å | θ = 6.3–59.2° |
b = 7.223 (2) Å | µ = 3.96 mm−1 |
c = 7.649 (2) Å | T = 295 K |
β = 122.66 (1)° | Cube, colourless |
V = 616.1 (3) Å3 | 0.1 × 0.1 × 0.07 mm |
Z = 4 | |
Data collection top
Stoe IPDS-II diffractometer | 868 independent reflections |
Radiation source: fine-focus sealed tube | 551 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.092 |
φ scans | θmax = 29.6°, θmin = 3.4° |
Absorption correction: numerical [X-RED (Stoe & Cie, 2001); the crystal shape was optimized using X-SHAPE (Stoe & Cie, 1999)] | h = −18→18 |
Tmin = 0.690, Tmax = 0.766 | k = −9→10 |
5711 measured reflections | l = −10→10 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | All H-atom parameters refined |
wR(F2) = 0.091 | w = 1/[σ2(Fo2) + (0.0395P)2 + 0.4994P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max < 0.001 |
868 reflections | Δρmax = 0.67 e Å−3 |
61 parameters | Δρmin = −1.30 e Å−3 |
2 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0066 (14) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Zn1 | 0.2500 | 0.2500 | 0.5000 | 0.0237 (2) | |
O1 | 0.2284 (3) | 0.4834 (5) | 0.1010 (5) | 0.0347 (8) | |
O2 | 0.1289 (3) | 0.2856 (4) | 0.1802 (4) | 0.0240 (7) | |
O3 | 0.1068 (3) | 0.1323 (5) | 0.4968 (6) | 0.0335 (8) | |
C1 | 0.1413 (4) | 0.3825 (6) | 0.0557 (6) | 0.0237 (8) | |
C2 | 0.0415 (4) | 0.3751 (6) | −0.1614 (7) | 0.0263 (9) | |
H1 | 0.041 (3) | 0.177 (8) | 0.460 (10) | 0.06 (2)* | |
H2 | 0.133 (6) | 0.075 (8) | 0.605 (6) | 0.06 (2)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Zn1 | 0.0214 (4) | 0.0285 (4) | 0.0179 (3) | 0.0001 (4) | 0.0086 (3) | −0.0010 (4) |
O1 | 0.0301 (18) | 0.0359 (18) | 0.0256 (16) | −0.0119 (14) | 0.0069 (14) | 0.0057 (13) |
O2 | 0.0231 (15) | 0.029 (2) | 0.0164 (12) | −0.0027 (11) | 0.0083 (11) | 0.0021 (10) |
O3 | 0.0234 (19) | 0.047 (2) | 0.0303 (18) | 0.0029 (15) | 0.0146 (16) | 0.0096 (15) |
C1 | 0.025 (2) | 0.0232 (19) | 0.0190 (19) | 0.0009 (16) | 0.0095 (18) | −0.0014 (15) |
C2 | 0.024 (2) | 0.032 (2) | 0.0210 (18) | −0.0029 (17) | 0.0108 (17) | 0.0018 (17) |
Geometric parameters (Å, º) top
Zn1—O3i | 2.067 (3) | O1—Zn1iv | 2.151 (3) |
Zn1—O3 | 2.067 (3) | O2—C1 | 1.262 (5) |
Zn1—O2i | 2.094 (3) | C1—C2 | 1.462 (6) |
Zn1—O2 | 2.094 (3) | C2—C2v | 1.199 (9) |
Zn1—O1ii | 2.151 (3) | O3—H1 | 0.82 (2) |
Zn1—O1iii | 2.151 (3) | O3—H2 | 0.81 (2) |
O1—C1 | 1.245 (5) | | |
| | | |
O3i—Zn1—O3 | 180.0 | O2i—Zn1—O1iii | 98.23 (12) |
O3i—Zn1—O2i | 85.24 (13) | O2—Zn1—O1iii | 81.77 (12) |
O3—Zn1—O2i | 94.76 (13) | O1ii—Zn1—O1iii | 180.0 |
O3i—Zn1—O2 | 94.76 (13) | C1—O1—Zn1iv | 135.0 (3) |
O3—Zn1—O2 | 85.24 (13) | C1—O2—Zn1 | 128.3 (3) |
O2i—Zn1—O2 | 180.0 | Zn1—O3—H1 | 130 (5) |
O3i—Zn1—O1ii | 85.80 (15) | Zn1—O3—H2 | 108 (5) |
O3—Zn1—O1ii | 94.20 (15) | O1—C1—O2 | 126.4 (4) |
O2i—Zn1—O1ii | 81.77 (12) | O1—C1—C2 | 118.1 (4) |
O2—Zn1—O1ii | 98.23 (12) | O2—C1—C2 | 115.5 (4) |
O3i—Zn1—O1iii | 94.20 (15) | C2v—C2—C1 | 177.7 (4) |
O3—Zn1—O1iii | 85.80 (15) | H1—O3—H2 | 110 (7) |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+1; (ii) x, −y+1, z+1/2; (iii) −x+1/2, y−1/2, −z+1/2; (iv) −x+1/2, y+1/2, −z+1/2; (v) −x, y, −z−1/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H1···O2vi | 0.82 (2) | 2.06 (2) | 2.871 (5) | 171 (7) |
O3—H2···O1i | 0.81 (2) | 2.04 (4) | 2.771 (5) | 150 (7) |
Symmetry codes: (i) −x+1/2, −y+1/2, −z+1; (vi) −x, y, −z+1/2. |