The geometries of the thiazole ring and the nitramino groups in
N-(3
H-thiazol-2-ylidene)nitramine, C
3H
3N
3O
2S, (I), and
N-methyl-
N-(thiazol-2-yl)nitramine, C
4H
5N
3O
2S, (II), are very similar. The nitramine group in (II) is planar and twisted along the C—N bond with respect to the thiazole ring. In both structures, the asymmetric unit includes two practically equal molecules. In (I), the molecules are arranged in layers connected to each other by N—H
N and much weaker C—H
O hydrogen bonds. In the crystal structure of (II), the molecules are arranged in layers bound to each other by both weak C—H
O hydrogen bonds and S
O dipolar interactions.
Supporting information
CCDC references: 251305; 251306
The preparation of (Ib) by nitration of 2-aminothiazole in 77% sulfuric acid was previously described previously by Kyzioł et al. (2000). Crystals were obtained by crystallization from nitromethane. Compound (II) was obtained according to the method of Angeli (Angeli & Valovi, 1912). 2-(N-Methylamino)thiazole (2.30 g, 0.02 mol) and sodium hydride (1.60 g, 0.04 mol of 60% NaH) in a boiling benzene (120 ml) was refluxed for 1 h under a dry nitrogen atmosphere. The mixture was cooled to room temperature and n-butyl nitrate (5.00 g, 0.04 mol) diluted with benzene (5 ml) was added. A brown solution was stirred for 1 h at room temperature, water (20 ml) and acetic acid (2 ml) were added and the layers separated. The benzene solution was extracted with sodium hydrogen sulfate (10% aqueous, 2 × 30 ml) and water, dried with anhydrous magnesium sulfate and evaporated in a vacuum. The residue was dissolved in n-hexane, stirred with charcoal, filtered and cooled in a dry-ice box. Compound (II) (1.75 g, 55%) was collected by filtration (m.p. 319–321 K). Low-temperature crystallization from n-hexane provided crystals suitable for the X-ray diffraction studies. MS (m/z): 145 (M+, 10), 113 (94), 86 (3), 69 (100), 59 (11), 58 (15), 42 (30), 30 (14). IR (KBr): 3130 (aromatic protons); 1537, 1272 (N-nitro group). 1H NMR (DMSO-d6): δ 7.70 (d, 1H) and 7.59 (d, 3J = 3.8 Hz, 1H, aromatic protons), 3.99 (s, 3H, N-methyl group); 13C NMR (DMSO-d6): δ 157.8 (C–2), 138.7 (C–4), 118.2 (C–5), 37.3 (N-methyl group).
All H atoms were located from difference maps and subsequently treated as riding atoms, with C—H = 0.93–0.98 Å and N—H = 0.86 Å, and with Uiso(H) = 1.2Ueq(C or N), and 1.5Ueq(C) for the methyl H atoms.
For both compounds, data collection: CrysAlis CCD (Oxford Diffraction, 2002); cell refinement: CrysAlis RED; data reduction: CrysAlis RED (Oxford Diffraction, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97.
Crystal data top
C3H3N3O2S | F(000) = 592 |
Mr = 145.14 | Dx = 1.827 Mg m−3 |
Monoclinic, P2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yc | Cell parameters from 2459 reflections |
a = 18.737 (3) Å | θ = 3.5–27.6° |
b = 3.727 (1) Å | µ = 0.53 mm−1 |
c = 16.617 (2) Å | T = 100 K |
β = 114.57 (2)° | Irregular, white |
V = 1055.3 (4) Å3 | 0.3 × 0.3 × 0.2 mm |
Z = 8 | |
Data collection top
Xcalibur diffractometer | 1915 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.040 |
Graphite monochromator | θmax = 29.7°, θmin = 3.4° |
Detector resolution: 1024 x 1024 with blocks 2 x 2 pixels mm-1 | h = −26→23 |
ω scans | k = −5→3 |
7430 measured reflections | l = −22→23 |
2740 independent reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.093 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0449P)2] where P = (Fo2 + 2Fc2)/3 |
2740 reflections | (Δ/σ)max < 0.001 |
163 parameters | Δρmax = 0.52 e Å−3 |
0 restraints | Δρmin = −0.39 e Å−3 |
Crystal data top
C3H3N3O2S | V = 1055.3 (4) Å3 |
Mr = 145.14 | Z = 8 |
Monoclinic, P2/c | Mo Kα radiation |
a = 18.737 (3) Å | µ = 0.53 mm−1 |
b = 3.727 (1) Å | T = 100 K |
c = 16.617 (2) Å | 0.3 × 0.3 × 0.2 mm |
β = 114.57 (2)° | |
Data collection top
Xcalibur diffractometer | 1915 reflections with I > 2σ(I) |
7430 measured reflections | Rint = 0.040 |
2740 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.033 | 0 restraints |
wR(F2) = 0.093 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.52 e Å−3 |
2740 reflections | Δρmin = −0.39 e Å−3 |
163 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.30727 (3) | 0.99960 (13) | 0.45518 (3) | 0.01361 (13) | |
C2 | 0.39426 (11) | 0.7904 (5) | 0.47205 (12) | 0.0126 (4) | |
N3 | 0.43519 (9) | 0.7149 (4) | 0.55744 (10) | 0.0139 (3) | |
H3 | 0.4798 | 0.6075 | 0.5770 | 0.017* | |
C4 | 0.40037 (12) | 0.8226 (5) | 0.61216 (13) | 0.0171 (4) | |
H4 | 0.4226 | 0.7880 | 0.6731 | 0.021* | |
C5 | 0.33115 (11) | 0.9822 (5) | 0.56756 (13) | 0.0160 (4) | |
H5 | 0.2996 | 1.0729 | 0.5937 | 0.019* | |
N6 | 0.42570 (9) | 0.6901 (4) | 0.41530 (10) | 0.0141 (3) | |
N7 | 0.38360 (9) | 0.7706 (4) | 0.32978 (11) | 0.0166 (4) | |
O8 | 0.31882 (8) | 0.9266 (4) | 0.30423 (9) | 0.0193 (3) | |
O9 | 0.41379 (9) | 0.6832 (4) | 0.27911 (9) | 0.0241 (4) | |
S1' | 0.18949 (3) | 0.49066 (13) | 0.15011 (3) | 0.01294 (13) | |
C2' | 0.10362 (10) | 0.2892 (5) | 0.07853 (12) | 0.0114 (4) | |
N3' | 0.06265 (9) | 0.1717 (4) | 0.12250 (10) | 0.0124 (3) | |
H3' | 0.0184 | 0.0631 | 0.0967 | 0.015* | |
C4' | 0.09642 (11) | 0.2372 (5) | 0.21211 (13) | 0.0151 (4) | |
H4' | 0.0741 | 0.1696 | 0.2504 | 0.018* | |
C5' | 0.16518 (11) | 0.4094 (5) | 0.23794 (13) | 0.0155 (4) | |
H5' | 0.1960 | 0.4769 | 0.2960 | 0.019* | |
N6' | 0.07359 (9) | 0.2316 (4) | −0.00929 (10) | 0.0130 (3) | |
N7' | 0.11444 (9) | 0.3667 (4) | −0.05252 (11) | 0.0147 (3) | |
O8' | 0.17677 (8) | 0.5354 (4) | −0.01257 (9) | 0.0179 (3) | |
O9' | 0.08580 (8) | 0.3145 (4) | −0.13329 (9) | 0.0224 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0107 (2) | 0.0141 (2) | 0.0170 (3) | 0.00138 (19) | 0.00683 (18) | 0.0008 (2) |
C2 | 0.0120 (9) | 0.0111 (9) | 0.0148 (10) | −0.0023 (7) | 0.0058 (7) | −0.0004 (7) |
N3 | 0.0096 (7) | 0.0170 (8) | 0.0166 (9) | 0.0009 (6) | 0.0069 (6) | 0.0007 (7) |
C4 | 0.0229 (10) | 0.0171 (10) | 0.0157 (10) | −0.0022 (8) | 0.0122 (9) | 0.0000 (8) |
C5 | 0.0151 (9) | 0.0171 (10) | 0.0213 (10) | −0.0021 (8) | 0.0130 (8) | −0.0015 (9) |
N6 | 0.0127 (8) | 0.0184 (9) | 0.0117 (8) | 0.0028 (7) | 0.0055 (6) | 0.0016 (7) |
N7 | 0.0172 (8) | 0.0177 (9) | 0.0160 (9) | −0.0006 (7) | 0.0078 (7) | 0.0001 (7) |
O8 | 0.0129 (7) | 0.0251 (8) | 0.0171 (7) | 0.0054 (6) | 0.0035 (6) | 0.0030 (6) |
O9 | 0.0272 (8) | 0.0342 (9) | 0.0155 (7) | 0.0043 (7) | 0.0135 (6) | −0.0008 (7) |
S1' | 0.0108 (2) | 0.0142 (2) | 0.0137 (2) | −0.00073 (19) | 0.00488 (18) | −0.00009 (19) |
C2' | 0.0092 (8) | 0.0118 (9) | 0.0148 (9) | 0.0020 (7) | 0.0066 (7) | 0.0001 (7) |
N3' | 0.0093 (7) | 0.0148 (8) | 0.0131 (8) | −0.0003 (6) | 0.0046 (6) | 0.0001 (7) |
C4' | 0.0155 (9) | 0.0172 (10) | 0.0139 (10) | 0.0045 (8) | 0.0075 (8) | 0.0037 (8) |
C5' | 0.0179 (9) | 0.0162 (10) | 0.0105 (9) | 0.0005 (8) | 0.0041 (8) | −0.0009 (7) |
N6' | 0.0115 (7) | 0.0174 (8) | 0.0124 (8) | −0.0022 (6) | 0.0073 (6) | 0.0003 (7) |
N7' | 0.0150 (8) | 0.0166 (8) | 0.0150 (9) | 0.0026 (7) | 0.0087 (7) | 0.0026 (7) |
O8' | 0.0138 (7) | 0.0229 (8) | 0.0194 (8) | −0.0044 (6) | 0.0092 (6) | −0.0018 (6) |
O9' | 0.0256 (8) | 0.0317 (9) | 0.0118 (7) | −0.0020 (7) | 0.0097 (6) | −0.0001 (6) |
Geometric parameters (Å, º) top
S1—C2 | 1.721 (2) | S1'—C2' | 1.725 (2) |
S1—C5 | 1.731 (2) | S1'—C5' | 1.727 (2) |
C2—N3 | 1.333 (2) | C2'—N3' | 1.335 (2) |
C2—N6 | 1.356 (2) | C2'—N6' | 1.345 (2) |
N3—C4 | 1.381 (2) | N3'—C4' | 1.376 (2) |
N3—H3 | 0.8600 | N3'—H3' | 0.8600 |
C4—C5 | 1.336 (3) | C4'—C5' | 1.340 (3) |
C4—H4 | 0.9300 | C4'—H4' | 0.9300 |
C5—H5 | 0.9300 | C5'—H5' | 0.9300 |
N6—N7 | 1.342 (2) | N6'—N7' | 1.346 (2) |
N7—O9 | 1.237 (2) | N7'—O9' | 1.236 (2) |
N7—O8 | 1.250 (2) | N7'—O8' | 1.247 (2) |
| | | |
C2—S1—C5 | 90.28 (9) | C2'—S1'—C5' | 90.47 (9) |
N3—C2—N6 | 117.28 (17) | N3'—C2'—N6' | 117.72 (16) |
N3—C2—S1 | 110.84 (14) | N3'—C2'—S1' | 110.44 (14) |
N6—C2—S1 | 131.88 (15) | N6'—C2'—S1' | 131.84 (14) |
C2—N3—C4 | 114.80 (16) | C2'—N3'—C4' | 115.08 (16) |
C2—N3—H3 | 122.6 | C2'—N3'—H3' | 122.5 |
C4—N3—H3 | 122.6 | C4'—N3'—H3' | 122.5 |
C5—C4—N3 | 112.30 (18) | C5'—C4'—N3' | 112.32 (17) |
C5—C4—H4 | 123.8 | C5'—C4'—H4' | 123.8 |
N3—C4—H4 | 123.8 | N3'—C4'—H4' | 123.8 |
C4—C5—S1 | 111.77 (15) | C4'—C5'—S1' | 111.69 (15) |
C4—C5—H5 | 124.1 | C4'—C5'—H5' | 124.2 |
S1—C5—H5 | 124.1 | S1'—C5'—H5' | 124.2 |
N7—N6—C2 | 116.17 (15) | C2'—N6'—N7' | 116.43 (15) |
O9—N7—O8 | 123.05 (16) | O9'—N7'—O8' | 123.03 (16) |
O9—N7—N6 | 115.34 (16) | O9'—N7'—N6' | 115.72 (16) |
O8—N7—N6 | 121.61 (16) | O8'—N7'—N6' | 121.24 (15) |
| | | |
C5—S1—C2—N3 | 0.89 (14) | C5'—S1'—C2'—N3' | −0.58 (15) |
C5—S1—C2—N6 | 179.7 (2) | C5'—S1'—C2'—N6' | −179.78 (19) |
N6—C2—N3—C4 | −179.91 (16) | N6'—C2'—N3'—C4' | 179.78 (16) |
S1—C2—N3—C4 | −0.9 (2) | S1'—C2'—N3'—C4' | 0.4 (2) |
C2—N3—C4—C5 | 0.3 (2) | C2'—N3'—C4'—C5' | 0.0 (2) |
N3—C4—C5—S1 | 0.4 (2) | N3'—C4'—C5'—S1' | −0.4 (2) |
C2—S1—C5—C4 | −0.73 (16) | C2'—S1'—C5'—C4' | 0.59 (16) |
N3—C2—N6—N7 | −179.69 (16) | N3'—C2'—N6'—N7' | 177.19 (15) |
S1—C2—N6—N7 | 1.5 (3) | S1'—C2'—N6'—N7' | −3.7 (3) |
C2—N6—N7—O9 | 178.72 (16) | C2'—N6'—N7'—O9' | −179.38 (16) |
C2—N6—N7—O8 | −0.6 (3) | C2'—N6'—N7'—O8' | 0.1 (3) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3···N6i | 0.86 | 2.05 | 2.880 (2) | 163 |
N3′—H3′···N6′ii | 0.86 | 2.05 | 2.885 (2) | 163 |
C4—H4···O9iii | 0.93 | 2.54 | 3.276 (2) | 136 |
C4′—H4′···O9′iv | 0.93 | 2.59 | 3.360 (2) | 141 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y, −z; (iii) x, −y+1, z+1/2; (iv) x, −y, z+1/2. |
Crystal data top
C4H5N3O2S | F(000) = 656 |
Mr = 159.17 | Dx = 1.658 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3361 reflections |
a = 8.667 (2) Å | θ = 2.4–30.1° |
b = 11.473 (2) Å | µ = 0.44 mm−1 |
c = 12.919 (3) Å | T = 100 K |
β = 96.80 (3)° | Irregular, white |
V = 1275.6 (5) Å3 | 0.25 × 0.2 × 0.2 mm |
Z = 8 | |
Data collection top
Xcalibur diffractometer | 2340 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.010 |
Graphite monochromator | θmax = 30.1°, θmin = 2.4° |
Detector resolution: 1024 x 1024 with blocks 2 x 2 pixels mm-1 | h = −12→0 |
ω scans | k = 0→15 |
3561 measured reflections | l = −18→18 |
3361 independent reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.096 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0393P)2 + 0.7169P] where P = (Fo2 + 2Fc2)/3 |
3361 reflections | (Δ/σ)max < 0.001 |
183 parameters | Δρmax = 0.36 e Å−3 |
0 restraints | Δρmin = −0.32 e Å−3 |
Crystal data top
C4H5N3O2S | V = 1275.6 (5) Å3 |
Mr = 159.17 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.667 (2) Å | µ = 0.44 mm−1 |
b = 11.473 (2) Å | T = 100 K |
c = 12.919 (3) Å | 0.25 × 0.2 × 0.2 mm |
β = 96.80 (3)° | |
Data collection top
Xcalibur diffractometer | 2340 reflections with I > 2σ(I) |
3561 measured reflections | Rint = 0.010 |
3361 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.029 | 0 restraints |
wR(F2) = 0.096 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.36 e Å−3 |
3361 reflections | Δρmin = −0.32 e Å−3 |
183 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.15707 (5) | 0.21555 (4) | 0.11778 (4) | 0.01397 (11) | |
C2 | 0.09372 (19) | 0.07272 (15) | 0.12059 (13) | 0.0119 (3) | |
N3 | 0.19874 (17) | −0.00679 (14) | 0.11239 (12) | 0.0147 (3) | |
C4 | 0.3392 (2) | 0.04609 (17) | 0.10351 (15) | 0.0165 (4) | |
H4 | 0.4305 | 0.0024 | 0.0965 | 0.020* | |
C5 | 0.3392 (2) | 0.16380 (17) | 0.10540 (14) | 0.0160 (4) | |
H5 | 0.4279 | 0.2112 | 0.1005 | 0.019* | |
N6 | −0.05729 (17) | 0.03816 (14) | 0.13485 (12) | 0.0137 (3) | |
N7 | −0.17529 (17) | 0.11562 (14) | 0.12426 (12) | 0.0162 (3) | |
O8 | −0.14380 (16) | 0.21882 (12) | 0.11233 (13) | 0.0245 (3) | |
O9 | −0.30683 (15) | 0.07760 (13) | 0.12789 (11) | 0.0211 (3) | |
C10 | −0.0956 (2) | −0.08336 (16) | 0.15409 (15) | 0.0167 (4) | |
H10A | −0.1502 | −0.0881 | 0.2162 | 0.025* | |
H10B | 0.0001 | −0.1294 | 0.1651 | 0.025* | |
H10C | −0.1626 | −0.1141 | 0.0938 | 0.025* | |
S1' | 0.66132 (5) | 0.43921 (4) | 0.11936 (3) | 0.01350 (11) | |
C2' | 0.6036 (2) | 0.58282 (16) | 0.12696 (13) | 0.0123 (3) | |
N3' | 0.71028 (18) | 0.66079 (14) | 0.11917 (12) | 0.0161 (3) | |
C4' | 0.8481 (2) | 0.60599 (17) | 0.10618 (14) | 0.0171 (4) | |
H4' | 0.9403 | 0.6485 | 0.0992 | 0.020* | |
C5' | 0.8444 (2) | 0.48844 (17) | 0.10386 (14) | 0.0161 (4) | |
H5' | 0.9306 | 0.4399 | 0.0949 | 0.019* | |
N6' | 0.45361 (17) | 0.62050 (14) | 0.14153 (12) | 0.0143 (3) | |
N7' | 0.33631 (18) | 0.54327 (15) | 0.14488 (12) | 0.0159 (3) | |
O8' | 0.36874 (16) | 0.43870 (12) | 0.14500 (11) | 0.0212 (3) | |
O9' | 0.20578 (15) | 0.58321 (14) | 0.14807 (11) | 0.0217 (3) | |
C10' | 0.4130 (2) | 0.74420 (18) | 0.14208 (17) | 0.0230 (4) | |
H10D | 0.3473 | 0.7637 | 0.0774 | 0.034* | |
H10E | 0.5081 | 0.7912 | 0.1474 | 0.034* | |
H10F | 0.3565 | 0.7606 | 0.2018 | 0.034* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0123 (2) | 0.0106 (2) | 0.0194 (2) | −0.00114 (16) | 0.00320 (15) | −0.00044 (16) |
C2 | 0.0097 (7) | 0.0122 (9) | 0.0137 (8) | −0.0007 (6) | 0.0011 (6) | 0.0009 (6) |
N3 | 0.0115 (7) | 0.0139 (8) | 0.0191 (7) | 0.0004 (6) | 0.0027 (5) | 0.0008 (6) |
C4 | 0.0100 (8) | 0.0189 (9) | 0.0206 (9) | 0.0005 (7) | 0.0022 (6) | 0.0005 (7) |
C5 | 0.0112 (7) | 0.0193 (10) | 0.0178 (8) | −0.0021 (7) | 0.0024 (6) | −0.0001 (7) |
N6 | 0.0093 (6) | 0.0117 (7) | 0.0204 (7) | −0.0002 (6) | 0.0030 (5) | 0.0013 (6) |
N7 | 0.0104 (6) | 0.0178 (8) | 0.0206 (8) | 0.0020 (6) | 0.0023 (6) | −0.0012 (6) |
O8 | 0.0172 (7) | 0.0131 (7) | 0.0436 (9) | 0.0028 (5) | 0.0054 (6) | 0.0022 (6) |
O9 | 0.0092 (6) | 0.0261 (8) | 0.0282 (7) | −0.0008 (5) | 0.0029 (5) | −0.0010 (6) |
C10 | 0.0161 (8) | 0.0126 (9) | 0.0219 (9) | −0.0036 (7) | 0.0040 (7) | 0.0012 (7) |
S1' | 0.0122 (2) | 0.0110 (2) | 0.0175 (2) | 0.00123 (16) | 0.00251 (15) | 0.00032 (16) |
C2' | 0.0117 (7) | 0.0114 (8) | 0.0139 (8) | 0.0017 (6) | 0.0012 (6) | 0.0003 (6) |
N3' | 0.0138 (7) | 0.0142 (8) | 0.0202 (7) | −0.0001 (6) | 0.0017 (6) | 0.0003 (6) |
C4' | 0.0114 (8) | 0.0199 (10) | 0.0200 (8) | −0.0013 (7) | 0.0023 (6) | 0.0015 (7) |
C5' | 0.0102 (8) | 0.0202 (10) | 0.0184 (8) | 0.0020 (7) | 0.0030 (6) | 0.0015 (7) |
N6' | 0.0108 (6) | 0.0127 (7) | 0.0198 (7) | 0.0016 (6) | 0.0031 (5) | −0.0007 (6) |
N7' | 0.0120 (7) | 0.0200 (8) | 0.0157 (7) | 0.0000 (6) | 0.0024 (5) | −0.0003 (6) |
O8' | 0.0169 (7) | 0.0164 (7) | 0.0310 (8) | −0.0017 (5) | 0.0057 (6) | 0.0006 (6) |
O9' | 0.0108 (6) | 0.0307 (8) | 0.0240 (7) | 0.0037 (6) | 0.0037 (5) | 0.0007 (6) |
C10' | 0.0197 (9) | 0.0131 (9) | 0.0360 (11) | 0.0063 (8) | 0.0029 (8) | −0.0029 (8) |
Geometric parameters (Å, º) top
S1—C2 | 1.7300 (18) | S1'—C2' | 1.7280 (19) |
S1—C5 | 1.7118 (19) | S1'—C5' | 1.7182 (19) |
C2—N3 | 1.302 (2) | C2'—N3' | 1.299 (2) |
C2—N6 | 1.400 (2) | C2'—N6' | 1.404 (2) |
N3—C4 | 1.377 (2) | N3'—C4' | 1.377 (2) |
C4—C5 | 1.351 (3) | C4'—C5' | 1.349 (3) |
C4—H4 | 0.9500 | C4'—H4' | 0.9500 |
C5—H5 | 0.9500 | C5'—H5' | 0.9500 |
N6—N7 | 1.350 (2) | N6'—N7' | 1.353 (2) |
N6—C10 | 1.461 (2) | N6'—C10' | 1.462 (2) |
N7—O9 | 1.227 (2) | N7'—O9' | 1.226 (2) |
N7—O8 | 1.229 (2) | N7'—O8' | 1.232 (2) |
C10—H10A | 0.9800 | C10'—H10D | 0.9800 |
C10—H10B | 0.9800 | C10'—H10E | 0.9800 |
C10—H10C | 0.9800 | C10'—H10F | 0.9800 |
| | | |
C5—S1—C2 | 88.39 (9) | C5'—S1'—C2' | 88.31 (9) |
N3—C2—N6 | 119.05 (16) | N3'—C2'—N6' | 118.50 (16) |
N3—C2—S1 | 115.81 (13) | N3'—C2'—S1' | 116.05 (13) |
N6—C2—S1 | 125.09 (14) | N6'—C2'—S1' | 125.45 (14) |
C2—N3—C4 | 109.36 (16) | C2'—N3'—C4' | 109.28 (16) |
C5—C4—N3 | 115.94 (18) | C5'—C4'—N3' | 116.13 (17) |
C5—C4—H4 | 122.0 | C5'—C4'—H4' | 121.9 |
N3—C4—H4 | 122.0 | N3'—C4'—H4' | 121.9 |
C4—C5—S1 | 110.50 (15) | C4'—C5'—S1' | 110.22 (14) |
C4—C5—H5 | 124.8 | C4'—C5'—H5' | 124.9 |
S1—C5—H5 | 124.8 | S1'—C5'—H5' | 124.9 |
N7—N6—C2 | 120.60 (15) | N7'—N6'—C2' | 120.92 (15) |
N7—N6—C10 | 117.43 (15) | N7'—N6'—C10' | 116.95 (15) |
C2—N6—C10 | 121.83 (15) | C2'—N6'—C10' | 121.79 (16) |
O9—N7—O8 | 124.65 (16) | O9'—N7'—O8' | 125.12 (17) |
O9—N7—N6 | 117.29 (16) | O9'—N7'—N6' | 117.14 (16) |
O8—N7—N6 | 118.05 (15) | O8'—N7'—N6' | 117.74 (15) |
N6—C10—H10A | 109.5 | N6'—C10'—H10D | 109.5 |
N6—C10—H10B | 109.5 | N6'—C10'—H10E | 109.5 |
H10A—C10—H10B | 109.5 | H10D—C10'—H10E | 109.5 |
N6—C10—H10C | 109.5 | N6'—C10'—H10F | 109.5 |
H10A—C10—H10C | 109.5 | H10D—C10'—H10F | 109.5 |
H10B—C10—H10C | 109.5 | H10E—C10'—H10F | 109.5 |
| | | |
C5—S1—C2—N3 | −0.37 (15) | C5'—S1'—C2'—N3' | −0.25 (14) |
C5—S1—C2—N6 | 177.02 (16) | C5'—S1'—C2'—N6' | −179.67 (16) |
N6—C2—N3—C4 | −177.39 (15) | N6'—C2'—N3'—C4' | 179.52 (15) |
S1—C2—N3—C4 | 0.2 (2) | S1'—C2'—N3'—C4' | 0.05 (19) |
C2—N3—C4—C5 | 0.2 (2) | C2'—N3'—C4'—C5' | 0.2 (2) |
N3—C4—C5—S1 | −0.5 (2) | N3'—C4'—C5'—S1' | −0.4 (2) |
C2—S1—C5—C4 | 0.46 (15) | C2'—S1'—C5'—C4' | 0.36 (14) |
N3—C2—N6—N7 | −167.56 (16) | N3'—C2'—N6'—N7' | 176.65 (16) |
S1—C2—N6—N7 | 15.1 (2) | S1'—C2'—N6'—N7' | −3.9 (2) |
N3—C2—N6—C10 | 8.0 (2) | N3'—C2'—N6'—C10' | 3.6 (2) |
S1—C2—N6—C10 | −169.35 (13) | S1'—C2'—N6'—C10' | −177.03 (14) |
C2—N6—N7—O9 | 173.20 (16) | C2'—N6'—N7'—O9' | −173.39 (15) |
C10—N6—N7—O9 | −2.5 (2) | C10'—N6'—N7'—O9' | 0.0 (2) |
C2—N6—N7—O8 | −7.2 (2) | C2'—N6'—N7'—O8' | 6.9 (2) |
C10—N6—N7—O8 | 177.07 (16) | C10'—N6'—N7'—O8' | −179.64 (16) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O9i | 0.95 | 2.42 | 3.068 (2) | 125 |
C4′—H4′···O9′i | 0.95 | 2.43 | 3.094 (2) | 127 |
Symmetry code: (i) x+1, y, z. |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | C3H3N3O2S | C4H5N3O2S |
Mr | 145.14 | 159.17 |
Crystal system, space group | Monoclinic, P2/c | Monoclinic, P21/c |
Temperature (K) | 100 | 100 |
a, b, c (Å) | 18.737 (3), 3.727 (1), 16.617 (2) | 8.667 (2), 11.473 (2), 12.919 (3) |
β (°) | 114.57 (2) | 96.80 (3) |
V (Å3) | 1055.3 (4) | 1275.6 (5) |
Z | 8 | 8 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.53 | 0.44 |
Crystal size (mm) | 0.3 × 0.3 × 0.2 | 0.25 × 0.2 × 0.2 |
|
Data collection |
Diffractometer | Xcalibur diffractometer | Xcalibur diffractometer |
Absorption correction | – | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7430, 2740, 1915 | 3561, 3361, 2340 |
Rint | 0.040 | 0.010 |
(sin θ/λ)max (Å−1) | 0.697 | 0.705 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.093, 1.04 | 0.029, 0.096, 1.06 |
No. of reflections | 2740 | 3361 |
No. of parameters | 163 | 183 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.52, −0.39 | 0.36, −0.32 |
Selected geometric parameters (Å, º) for (I) topS1—C2 | 1.721 (2) | S1'—C2' | 1.725 (2) |
S1—C5 | 1.731 (2) | S1'—C5' | 1.727 (2) |
C2—N3 | 1.333 (2) | C2'—N3' | 1.335 (2) |
C2—N6 | 1.356 (2) | C2'—N6' | 1.345 (2) |
C4—C5 | 1.336 (3) | C4'—C5' | 1.340 (3) |
N6—N7 | 1.342 (2) | N6'—N7' | 1.346 (2) |
N7—O9 | 1.237 (2) | N7'—O9' | 1.236 (2) |
N7—O8 | 1.250 (2) | N7'—O8' | 1.247 (2) |
| | | |
C2—S1—C5 | 90.28 (9) | C2'—S1'—C5' | 90.47 (9) |
N3—C2—N6 | 117.28 (17) | N3'—C2'—N6' | 117.72 (16) |
N3—C2—S1 | 110.84 (14) | N3'—C2'—S1' | 110.44 (14) |
N6—C2—S1 | 131.88 (15) | N6'—C2'—S1' | 131.84 (14) |
C2—N3—C4 | 114.80 (16) | C2'—N3'—C4' | 115.08 (16) |
N7—N6—C2 | 116.17 (15) | C2'—N6'—N7' | 116.43 (15) |
O9—N7—O8 | 123.05 (16) | O9'—N7'—O8' | 123.03 (16) |
O9—N7—N6 | 115.34 (16) | O9'—N7'—N6' | 115.72 (16) |
O8—N7—N6 | 121.61 (16) | O8'—N7'—N6' | 121.24 (15) |
| | | |
N3—C2—N6—N7 | −179.69 (16) | N3'—C2'—N6'—N7' | 177.19 (15) |
S1—C2—N6—N7 | 1.5 (3) | S1'—C2'—N6'—N7' | −3.7 (3) |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3···N6i | 0.86 | 2.05 | 2.880 (2) | 163 |
N3'—H3'···N6'ii | 0.86 | 2.05 | 2.885 (2) | 163 |
C4—H4···O9iii | 0.93 | 2.54 | 3.276 (2) | 136 |
C4'—H4'···O9'iv | 0.93 | 2.59 | 3.360 (2) | 141 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y, −z; (iii) x, −y+1, z+1/2; (iv) x, −y, z+1/2. |
Selected geometric parameters (Å, º) for (II) topS1—C2 | 1.7300 (18) | S1'—C2' | 1.7280 (19) |
S1—C5 | 1.7118 (19) | S1'—C5' | 1.7182 (19) |
C2—N3 | 1.302 (2) | C2'—N3' | 1.299 (2) |
C2—N6 | 1.400 (2) | C2'—N6' | 1.404 (2) |
N3—C4 | 1.377 (2) | N3'—C4' | 1.377 (2) |
C4—C5 | 1.351 (3) | C4'—C5' | 1.349 (3) |
N6—N7 | 1.350 (2) | N6'—N7' | 1.353 (2) |
N6—C10 | 1.461 (2) | N6'—C10' | 1.462 (2) |
N7—O9 | 1.227 (2) | N7'—O9' | 1.226 (2) |
N7—O8 | 1.229 (2) | N7'—O8' | 1.232 (2) |
| | | |
C5—S1—C2 | 88.39 (9) | C5'—S1'—C2' | 88.31 (9) |
N3—C2—N6 | 119.05 (16) | N3'—C2'—N6' | 118.50 (16) |
N3—C2—S1 | 115.81 (13) | N3'—C2'—S1' | 116.05 (13) |
N6—C2—S1 | 125.09 (14) | N6'—C2'—S1' | 125.45 (14) |
C2—N3—C4 | 109.36 (16) | C2'—N3'—C4' | 109.28 (16) |
N7—N6—C2 | 120.60 (15) | N7'—N6'—C2' | 120.92 (15) |
N7—N6—C10 | 117.43 (15) | N7'—N6'—C10' | 116.95 (15) |
C2—N6—C10 | 121.83 (15) | C2'—N6'—C10' | 121.79 (16) |
O9—N7—O8 | 124.65 (16) | O9'—N7'—O8' | 125.12 (17) |
O9—N7—N6 | 117.29 (16) | O9'—N7'—N6' | 117.14 (16) |
O8—N7—N6 | 118.05 (15) | O8'—N7'—N6' | 117.74 (15) |
| | | |
N3—C2—N6—N7 | −167.56 (16) | N3'—C2'—N6'—N7' | 176.65 (16) |
S1—C2—N6—N7 | 15.1 (2) | S1'—C2'—N6'—N7' | −3.9 (2) |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O9i | 0.95 | 2.42 | 3.068 (2) | 125 |
C4'—H4'···O9'i | 0.95 | 2.43 | 3.094 (2) | 127 |
Symmetry code: (i) x+1, y, z. |
Primary nitramines display acidic properties, e.g. the pKa values of ring substituted N-phenylnitramines vary from 3.77 to 5.62, depending on the electronic character of the substituent (Daszkiewicz, Spaleniak & Kyzioł, 2002). N-(4-Pyridyl)nitramine is much less acidic (pKa = 8.01), probably as a result of tautomerism; in the crystalline lattice it exists in the nitrimine form, i.e. as 1,4-dihydro-4-nitriminopyridine (Krygowski et al., 1996). IR spectroscopy indicates that the nitrimine form also prevails in solution (Kyzioł et al., 2002). The molecule of N-(thiazol-2-ylidene)nitramine, (I), also contains acidic (NHNO2) and basic (—N═) centers and hence analogous tautomerism cannot be excluded. However, the acidity (pKa = 4.00) is similar to that of typical primary nitramines.
Within the pyridine series, we have observed some differences in the geometry of the ring and the NNO2 group between nitramine and isomeric nitrimine (Kyzioł et al., 2002). In the present paper, we establish the structure of N-(thiazol-2-ylidene)nitramine to be (Ib) (see scheme and Fig. 1) and compare this structure with that of N-methyl-N-(thiazol-2-yl)nitramine, (II) (Fig. 2), and its isomer 2,3-dihydro-3-methyl-2-nitriminothiazole, (III) (Kyzioł et al., 2000).
The geometries of the thiazole rings and the nitramine groups in (Ib) and (II) are very similar (Tables 1 and 3). The formally single C2—N3 bond in (Ib) is only 0.03 Å longer than that in (II), while the C2—N6 bond is 0.05 Å shorter. Surprisingly, the N–N bond lengths are nearly the same in the two compounds. The mean N3—C2—S1 angle is greater in nitramine (II) [115.9 (1)°] than in nitrimine (Ib) [110.6 (2)°]. Significant differences are also seen in the mean C2—N3—C4 angle, which is 109.3 (1)° in (II) and 114.9 (1)° in (Ib), The geometry of the ring is typical of thiazole derivatives (e.g. Caranoni & Reboul, 1982).
The shapes of the NNO2 groups are also very similar; the mean N—O bonds in (Ib) and (II) are 1.243 (6) and 1.229 (2) Å, respectively. The results correspond well to the notation given on the scheme above.
The nitramine group in (II) is planar and twisted along the C2—N6 bond with respect to the thiazole ring; details of relevant torsion angles are given in Table 3. In other N-aryl-N-methylnitramines, the planes of the nitramine group and the thiazole ring are nearly perpendicular (Daszkiewicz, Zaleski et al., 2002). Such a conformation probably results from the crystal packing since the rotational energy barrier (ca 12 kJ mol−1) along the aryl–N bond is rather low. Spectral and chemical properties of thiazolylnitramines are very similar to phenyl- and pyridylnitramines, hence the mesomeric interaction between the nitramine group and the thiazole ring may be excluded.
Hydrogen bonding plays an important role in the crystal packing of (Ib). In the IR spectrum (in a KBr pellet), the hydrogen bonding is observed as an intense and broad band in the 3100–2626 cm−1 region, with several submaxima. The band corresponding to the N—H stretching vibrations appears at 3604 cm−1, when the spectrum is registered in a diluted solution in deuterochloroform. Molecules of (Ib) are linked by N—H···N and weak C—H···O hydrogen bonds (Table 2), forming layers in the ac plane (Fig. 3). The shortest S···O separations are S1···O8'(x, 2 − y, 0.5 + z) of 3.219 (2) Å and S1'···O8 of 3.148 (2) Å. Molecules of (II) are linked by weak C—H···O hydrogen bonds (Table 4), forming layers in the ab plane (Fig. 4). Close intermolecular contacts are also found between S and O atoms [S1···O8' = 3.145 (2) Å and S1'···O8(1 + x, y, z) = 3.048 (2) Å], which are shorter than the sum of the van der Waals radii (3.25 Å; Pauling, 1960).