The crystal structures of 1,2-dihydro-1,1′-bi[thiazolo[3,2-a]quinoline]-10a,10a′-diium diiodide hemihydrate, C22H16N2S22+·2I−·0.5H2O, and 1,2-dihydro-1,1′-bi[thiazolo[3,2-a]quinoline]-10a,10a′-diium iodide triiodide, C22H16N2S22+·I−·I3−, obtained during the reaction of 1,4-bis(quinolin-2-ylsulfanyl)but-2-yne (2TQB) with iodine, have been determined at 120 K. The crystalline products contain the dication as a result of the reaction proceeding along the iodocyclization pathway. This is fundamentally different from the previously observed reaction of 1,4-bis(quinolin-8-ylsulfanyl)but-2-yne (8TQB) with iodine under similar conditions. A comparative analysis of the possible conformational states indicates differences in the relative stabilities and free rotation for the 2- and 8-thioquinoline derivatives which lead to a disparity in the convergence of the potential reaction centres for 2TQB and 8TQB.
Supporting information
CCDC references: 1852485; 1852484
For both structures, data collection: APEX2 (Bruker, 2013); cell refinement: SAINT (Bruker, 2013); data reduction: SAINT (Bruker, 2013); program(s) used to solve structure: SHELXT2014 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015b); molecular graphics: SHELXTL (Bruker, 2013).
1,2-Dihydro-1,1'-bi[thiazolo[3,2-
a]quinoline]-10a,10a'-diium diiodide
hemihydrate (kb06)
top
Crystal data top
C22H16N2S22+·2I−·0.5H2O | F(000) = 2440 |
Mr = 635.29 | Dx = 1.975 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 21.3218 (16) Å | Cell parameters from 6680 reflections |
b = 8.6006 (6) Å | θ = 2.6–32.0° |
c = 25.2773 (19) Å | µ = 3.15 mm−1 |
β = 112.768 (2)° | T = 120 K |
V = 4274.2 (5) Å3 | Prism, red |
Z = 8 | 0.21 × 0.14 × 0.14 mm |
Data collection top
Bruker SMART APEX DUO diffractometer | 7369 reflections with I > 2σ(I) |
ω scan | Rint = 0.054 |
Absorption correction: analytical (SADABS; Bruker, 2013) | θmax = 36.3°, θmin = 2.1° |
Tmin = 0.637, Tmax = 0.762 | h = −35→35 |
38462 measured reflections | k = −14→14 |
10030 independent reflections | l = −41→41 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.044 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.116 | w = 1/[σ2(Fo2) + (0.0579P)2 + 6.0287P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max = 0.003 |
10030 reflections | Δρmax = 2.34 e Å−3 |
259 parameters | Δρmin = −1.57 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
I1 | 0.12530 (2) | −0.11371 (2) | 0.71511 (2) | 0.01845 (5) | |
I2 | 0.33136 (2) | 0.57033 (3) | 0.48198 (2) | 0.02524 (6) | |
S1 | 0.33277 (4) | 0.25899 (9) | 0.59378 (4) | 0.02274 (16) | |
S2 | 0.16065 (4) | 0.29419 (9) | 0.68456 (3) | 0.02015 (14) | |
O1 | 0.0000 | −0.3133 (5) | 0.7500 | 0.0380 (10) | |
H1 | 0.0279 | −0.2514 | 0.7435 | 0.043 (15)* | |
N1 | 0.30928 (13) | 0.5223 (3) | 0.63007 (11) | 0.0155 (4) | |
N2 | 0.12470 (13) | 0.3910 (3) | 0.58006 (11) | 0.0152 (4) | |
C1 | 0.36036 (16) | 0.4334 (4) | 0.62626 (14) | 0.0194 (5) | |
C2 | 0.42893 (17) | 0.4810 (4) | 0.64724 (14) | 0.0222 (6) | |
H2 | 0.4632 | 0.4149 | 0.6444 | 0.027* | |
C3 | 0.44465 (17) | 0.6233 (5) | 0.67155 (14) | 0.0238 (6) | |
H3 | 0.4907 | 0.6570 | 0.6867 | 0.029* | |
C4 | 0.39299 (16) | 0.7228 (4) | 0.67469 (13) | 0.0197 (6) | |
C5 | 0.40962 (17) | 0.8750 (4) | 0.69685 (14) | 0.0225 (6) | |
H5 | 0.4554 | 0.9096 | 0.7095 | 0.027* | |
C6 | 0.36055 (19) | 0.9740 (4) | 0.70040 (14) | 0.0242 (6) | |
H6 | 0.3723 | 1.0758 | 0.7156 | 0.029* | |
C7 | 0.29355 (18) | 0.9228 (4) | 0.68138 (14) | 0.0214 (6) | |
H7 | 0.2596 | 0.9908 | 0.6838 | 0.026* | |
C8 | 0.27510 (16) | 0.7751 (3) | 0.65904 (13) | 0.0177 (5) | |
H8 | 0.2291 | 0.7426 | 0.6466 | 0.021* | |
C9 | 0.32432 (15) | 0.6735 (3) | 0.65467 (12) | 0.0166 (5) | |
C10 | 0.24586 (15) | 0.4438 (3) | 0.60695 (13) | 0.0167 (5) | |
C11 | 0.25155 (17) | 0.3020 (4) | 0.58600 (14) | 0.0206 (6) | |
H11 | 0.2142 | 0.2336 | 0.5688 | 0.025* | |
C12 | 0.18136 (15) | 0.4988 (3) | 0.61246 (13) | 0.0161 (5) | |
H12 | 0.1702 | 0.6071 | 0.5973 | 0.019* | |
C13 | 0.18691 (16) | 0.4907 (4) | 0.67502 (13) | 0.0175 (5) | |
H131 | 0.1568 | 0.5687 | 0.6819 | 0.021* | |
H132 | 0.2343 | 0.5105 | 0.7020 | 0.021* | |
C14 | 0.11069 (15) | 0.2825 (3) | 0.61238 (13) | 0.0170 (5) | |
C15 | 0.05745 (16) | 0.1750 (4) | 0.58746 (14) | 0.0199 (6) | |
H152 | 0.0486 | 0.0962 | 0.6100 | 0.024* | |
C16 | 0.01884 (17) | 0.1868 (4) | 0.53019 (15) | 0.0223 (6) | |
H162 | −0.0189 | 0.1192 | 0.5133 | 0.027* | |
C17 | 0.03404 (16) | 0.2979 (4) | 0.49552 (13) | 0.0188 (5) | |
C18 | −0.00462 (17) | 0.3094 (4) | 0.43564 (14) | 0.0230 (6) | |
H182 | −0.0421 | 0.2415 | 0.4179 | 0.028* | |
C19 | 0.01165 (19) | 0.4173 (4) | 0.40338 (15) | 0.0252 (7) | |
H192 | −0.0138 | 0.4231 | 0.3632 | 0.030* | |
C20 | 0.06647 (19) | 0.5205 (4) | 0.43002 (14) | 0.0245 (6) | |
H202 | 0.0769 | 0.5964 | 0.4074 | 0.029* | |
C21 | 0.10509 (17) | 0.5134 (4) | 0.48800 (14) | 0.0202 (6) | |
H212 | 0.1422 | 0.5825 | 0.5052 | 0.024* | |
C22 | 0.08863 (15) | 0.4025 (3) | 0.52109 (13) | 0.0161 (5) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
I1 | 0.01832 (9) | 0.01474 (9) | 0.02153 (9) | −0.00045 (6) | 0.00687 (7) | −0.00018 (6) |
I2 | 0.02916 (12) | 0.01579 (10) | 0.02553 (11) | −0.00440 (8) | 0.00483 (8) | −0.00022 (7) |
S1 | 0.0249 (4) | 0.0145 (3) | 0.0327 (4) | 0.0041 (3) | 0.0153 (3) | −0.0003 (3) |
S2 | 0.0258 (4) | 0.0156 (3) | 0.0179 (3) | −0.0014 (3) | 0.0072 (3) | 0.0004 (2) |
O1 | 0.0270 (19) | 0.0188 (18) | 0.075 (3) | 0.000 | 0.027 (2) | 0.000 |
N1 | 0.0147 (10) | 0.0124 (10) | 0.0184 (11) | 0.0015 (8) | 0.0053 (9) | 0.0010 (8) |
N2 | 0.0170 (10) | 0.0094 (9) | 0.0171 (11) | −0.0015 (8) | 0.0042 (8) | −0.0022 (8) |
C1 | 0.0198 (13) | 0.0172 (13) | 0.0216 (14) | 0.0046 (10) | 0.0085 (11) | 0.0028 (10) |
C2 | 0.0178 (13) | 0.0275 (16) | 0.0223 (14) | 0.0042 (12) | 0.0086 (11) | 0.0024 (12) |
C3 | 0.0173 (13) | 0.0337 (18) | 0.0200 (14) | −0.0037 (12) | 0.0069 (11) | −0.0001 (12) |
C4 | 0.0191 (13) | 0.0208 (14) | 0.0183 (13) | −0.0040 (11) | 0.0062 (10) | 0.0005 (10) |
C5 | 0.0213 (14) | 0.0269 (16) | 0.0194 (13) | −0.0103 (12) | 0.0079 (11) | −0.0028 (11) |
C6 | 0.0340 (18) | 0.0187 (14) | 0.0192 (14) | −0.0098 (13) | 0.0096 (13) | −0.0036 (11) |
C7 | 0.0274 (15) | 0.0129 (12) | 0.0215 (14) | −0.0026 (11) | 0.0067 (12) | −0.0022 (10) |
C8 | 0.0175 (12) | 0.0115 (12) | 0.0202 (13) | −0.0015 (9) | 0.0031 (10) | −0.0004 (9) |
C9 | 0.0191 (13) | 0.0126 (12) | 0.0161 (12) | −0.0022 (9) | 0.0045 (10) | 0.0009 (9) |
C10 | 0.0163 (12) | 0.0126 (12) | 0.0205 (13) | 0.0013 (9) | 0.0064 (10) | 0.0011 (10) |
C11 | 0.0230 (14) | 0.0144 (12) | 0.0262 (15) | −0.0014 (11) | 0.0117 (12) | −0.0035 (11) |
C12 | 0.0173 (12) | 0.0120 (12) | 0.0175 (12) | −0.0020 (9) | 0.0052 (10) | −0.0013 (9) |
C13 | 0.0184 (13) | 0.0130 (12) | 0.0204 (13) | −0.0005 (10) | 0.0068 (10) | −0.0024 (10) |
C14 | 0.0166 (12) | 0.0137 (12) | 0.0206 (13) | −0.0012 (9) | 0.0069 (10) | −0.0002 (10) |
C15 | 0.0205 (14) | 0.0128 (13) | 0.0273 (15) | −0.0043 (10) | 0.0102 (12) | −0.0008 (10) |
C16 | 0.0187 (13) | 0.0164 (14) | 0.0295 (16) | −0.0030 (10) | 0.0067 (12) | −0.0030 (11) |
C17 | 0.0181 (13) | 0.0153 (12) | 0.0206 (13) | 0.0013 (10) | 0.0049 (10) | −0.0033 (10) |
C18 | 0.0193 (14) | 0.0213 (15) | 0.0220 (14) | 0.0029 (11) | 0.0009 (11) | −0.0049 (11) |
C19 | 0.0257 (16) | 0.0268 (17) | 0.0187 (14) | 0.0087 (13) | 0.0039 (12) | −0.0013 (12) |
C20 | 0.0337 (18) | 0.0194 (14) | 0.0203 (14) | 0.0085 (13) | 0.0102 (13) | 0.0023 (11) |
C21 | 0.0245 (14) | 0.0145 (13) | 0.0198 (13) | 0.0034 (11) | 0.0066 (11) | −0.0003 (10) |
C22 | 0.0167 (12) | 0.0110 (11) | 0.0195 (12) | 0.0029 (9) | 0.0058 (10) | 0.0002 (9) |
Geometric parameters (Å, º) top
I1—S2 | 3.7312 (9) | C7—H7 | 0.9500 |
I2—S1 | 3.8846 (9) | C8—C9 | 1.403 (4) |
S1—C1 | 1.702 (3) | C8—H8 | 0.9500 |
S1—C11 | 1.706 (3) | C10—C11 | 1.353 (4) |
S2—C14 | 1.723 (3) | C10—C12 | 1.511 (4) |
S2—C13 | 1.826 (3) | C11—H11 | 0.9500 |
O1—H1 | 0.8605 | C12—C13 | 1.541 (4) |
N1—C1 | 1.364 (4) | C12—H12 | 1.0000 |
N1—C10 | 1.419 (4) | C13—H131 | 0.9900 |
N1—C9 | 1.424 (4) | C13—H132 | 0.9900 |
N2—C14 | 1.348 (4) | C14—C15 | 1.409 (4) |
N2—C22 | 1.391 (4) | C15—C16 | 1.364 (5) |
N2—C12 | 1.491 (4) | C15—H152 | 0.9500 |
C1—C2 | 1.409 (5) | C16—C17 | 1.416 (5) |
C2—C3 | 1.352 (5) | C16—H162 | 0.9500 |
C2—H2 | 0.9500 | C17—C22 | 1.414 (4) |
C3—C4 | 1.421 (5) | C17—C18 | 1.419 (4) |
C3—H3 | 0.9500 | C18—C19 | 1.366 (5) |
C4—C5 | 1.414 (5) | C18—H182 | 0.9500 |
C4—C9 | 1.416 (4) | C19—C20 | 1.413 (5) |
C5—C6 | 1.379 (5) | C19—H192 | 0.9500 |
C5—H5 | 0.9500 | C20—C21 | 1.377 (5) |
C6—C7 | 1.391 (5) | C20—H202 | 0.9500 |
C6—H6 | 0.9500 | C21—C22 | 1.400 (4) |
C7—C8 | 1.384 (4) | C21—H212 | 0.9500 |
| | | |
C1—S1—C11 | 90.59 (16) | C10—C11—S1 | 113.0 (2) |
C1—S1—I2 | 69.35 (11) | C10—C11—H11 | 123.5 |
C11—S1—I2 | 92.57 (12) | S1—C11—H11 | 123.5 |
C14—S2—C13 | 90.55 (14) | N2—C12—C10 | 109.1 (2) |
C14—S2—I1 | 94.17 (10) | N2—C12—C13 | 105.0 (2) |
C13—S2—I1 | 174.06 (11) | C10—C12—C13 | 111.7 (2) |
C1—N1—C10 | 111.3 (3) | N2—C12—H12 | 110.3 |
C1—N1—C9 | 119.5 (3) | C10—C12—H12 | 110.3 |
C10—N1—C9 | 129.2 (3) | C13—C12—H12 | 110.3 |
C14—N2—C22 | 122.6 (3) | C12—C13—S2 | 105.8 (2) |
C14—N2—C12 | 114.8 (2) | C12—C13—H131 | 110.6 |
C22—N2—C12 | 122.6 (2) | S2—C13—H131 | 110.6 |
N1—C1—C2 | 123.4 (3) | C12—C13—H132 | 110.6 |
N1—C1—S1 | 113.1 (2) | S2—C13—H132 | 110.6 |
C2—C1—S1 | 123.5 (3) | H131—C13—H132 | 108.7 |
C3—C2—C1 | 118.2 (3) | N2—C14—C15 | 120.8 (3) |
C3—C2—H2 | 120.9 | N2—C14—S2 | 114.2 (2) |
C1—C2—H2 | 120.9 | C15—C14—S2 | 124.9 (2) |
C2—C3—C4 | 120.6 (3) | C16—C15—C14 | 118.5 (3) |
C2—C3—H3 | 119.7 | C16—C15—H152 | 120.8 |
C4—C3—H3 | 119.7 | C14—C15—H152 | 120.8 |
C5—C4—C9 | 119.0 (3) | C15—C16—C17 | 121.2 (3) |
C5—C4—C3 | 119.9 (3) | C15—C16—H162 | 119.4 |
C9—C4—C3 | 121.1 (3) | C17—C16—H162 | 119.4 |
C6—C5—C4 | 121.2 (3) | C22—C17—C16 | 119.4 (3) |
C6—C5—H5 | 119.4 | C22—C17—C18 | 118.6 (3) |
C4—C5—H5 | 119.4 | C16—C17—C18 | 122.0 (3) |
C5—C6—C7 | 119.1 (3) | C19—C18—C17 | 120.5 (3) |
C5—C6—H6 | 120.5 | C19—C18—H182 | 119.8 |
C7—C6—H6 | 120.5 | C17—C18—H182 | 119.8 |
C8—C7—C6 | 121.6 (3) | C18—C19—C20 | 119.8 (3) |
C8—C7—H7 | 119.2 | C18—C19—H192 | 120.1 |
C6—C7—H7 | 119.2 | C20—C19—H192 | 120.1 |
C7—C8—C9 | 120.1 (3) | C21—C20—C19 | 121.6 (3) |
C7—C8—H8 | 120.0 | C21—C20—H202 | 119.2 |
C9—C8—H8 | 120.0 | C19—C20—H202 | 119.2 |
C8—C9—C4 | 119.1 (3) | C20—C21—C22 | 118.7 (3) |
C8—C9—N1 | 123.7 (3) | C20—C21—H212 | 120.6 |
C4—C9—N1 | 117.2 (3) | C22—C21—H212 | 120.6 |
C11—C10—N1 | 112.0 (3) | N2—C22—C21 | 121.7 (3) |
C11—C10—C12 | 122.8 (3) | N2—C22—C17 | 117.4 (3) |
N1—C10—C12 | 124.7 (3) | C21—C22—C17 | 120.8 (3) |
| | | |
C10—N1—C1—C2 | −178.3 (3) | C14—N2—C12—C13 | −21.5 (3) |
C9—N1—C1—C2 | 2.1 (5) | C22—N2—C12—C13 | 157.9 (3) |
C10—N1—C1—S1 | 1.4 (3) | C11—C10—C12—N2 | −12.5 (4) |
C9—N1—C1—S1 | −178.1 (2) | N1—C10—C12—N2 | 176.9 (3) |
C11—S1—C1—N1 | −1.1 (3) | C11—C10—C12—C13 | 103.2 (3) |
I2—S1—C1—N1 | 91.4 (2) | N1—C10—C12—C13 | −67.4 (4) |
C11—S1—C1—C2 | 178.7 (3) | N2—C12—C13—S2 | 30.8 (3) |
I2—S1—C1—C2 | −88.8 (3) | C10—C12—C13—S2 | −87.3 (3) |
N1—C1—C2—C3 | −1.2 (5) | C14—S2—C13—C12 | −27.0 (2) |
S1—C1—C2—C3 | 179.1 (3) | C22—N2—C14—C15 | −0.7 (5) |
C1—C2—C3—C4 | −1.2 (5) | C12—N2—C14—C15 | 178.7 (3) |
C2—C3—C4—C5 | −175.9 (3) | C22—N2—C14—S2 | −178.4 (2) |
C2—C3—C4—C9 | 2.6 (5) | C12—N2—C14—S2 | 1.0 (3) |
C9—C4—C5—C6 | 1.5 (5) | C13—S2—C14—N2 | 16.0 (2) |
C3—C4—C5—C6 | 180.0 (3) | I1—S2—C14—N2 | −160.4 (2) |
C4—C5—C6—C7 | −0.5 (5) | C13—S2—C14—C15 | −161.5 (3) |
C5—C6—C7—C8 | 0.0 (5) | I1—S2—C14—C15 | 22.1 (3) |
C6—C7—C8—C9 | −0.6 (5) | N2—C14—C15—C16 | −2.3 (5) |
C7—C8—C9—C4 | 1.6 (5) | S2—C14—C15—C16 | 175.2 (3) |
C7—C8—C9—N1 | −177.3 (3) | C14—C15—C16—C17 | 3.8 (5) |
C5—C4—C9—C8 | −2.0 (4) | C15—C16—C17—C22 | −2.4 (5) |
C3—C4—C9—C8 | 179.5 (3) | C15—C16—C17—C18 | 178.5 (3) |
C5—C4—C9—N1 | 176.9 (3) | C22—C17—C18—C19 | 1.3 (5) |
C3—C4—C9—N1 | −1.6 (4) | C16—C17—C18—C19 | −179.6 (3) |
C1—N1—C9—C8 | 178.2 (3) | C17—C18—C19—C20 | −1.3 (5) |
C10—N1—C9—C8 | −1.3 (5) | C18—C19—C20—C21 | 1.1 (5) |
C1—N1—C9—C4 | −0.7 (4) | C19—C20—C21—C22 | −0.9 (5) |
C10—N1—C9—C4 | 179.9 (3) | C14—N2—C22—C21 | −178.3 (3) |
C1—N1—C10—C11 | −1.1 (4) | C12—N2—C22—C21 | 2.3 (4) |
C9—N1—C10—C11 | 178.4 (3) | C14—N2—C22—C17 | 2.0 (4) |
C1—N1—C10—C12 | 170.3 (3) | C12—N2—C22—C17 | −177.3 (3) |
C9—N1—C10—C12 | −10.2 (5) | C20—C21—C22—N2 | −178.7 (3) |
N1—C10—C11—S1 | 0.3 (4) | C20—C21—C22—C17 | 0.9 (5) |
C12—C10—C11—S1 | −171.3 (2) | C16—C17—C22—N2 | −0.5 (4) |
C1—S1—C11—C10 | 0.4 (3) | C18—C17—C22—N2 | 178.6 (3) |
I2—S1—C11—C10 | −68.9 (2) | C16—C17—C22—C21 | 179.8 (3) |
C14—N2—C12—C10 | 98.3 (3) | C18—C17—C22—C21 | −1.1 (4) |
C22—N2—C12—C10 | −82.2 (3) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···I1 | 0.86 | 2.72 | 3.5618 (19) | 167 |
1,2-Dihydro-1,1'-bi[thiazolo[3,2-
a]quinoline]-10a,10a'-diium
iodide triiodide (kb07)
top
Crystal data top
C22H16N2S2·I−·I3− | Z = 2 |
Mr = 880.09 | F(000) = 812 |
Triclinic, P1 | Dx = 2.251 Mg m−3 |
a = 8.4090 (4) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.1793 (5) Å | Cell parameters from 5766 reflections |
c = 15.0322 (7) Å | θ = 2.5–33.0° |
α = 100.233 (1)° | µ = 4.97 mm−1 |
β = 105.798 (1)° | T = 120 K |
γ = 100.372 (1)° | Prism, red |
V = 1298.61 (10) Å3 | 0.15 × 0.15 × 0.12 mm |
Data collection top
Bruker SMART APEX DUO diffractometer | 8210 reflections with I > 2σ(I) |
ω –scan | Rint = 0.035 |
Absorption correction: numerical SADABS-2014/5 - Bruker AXS area detector scaling
and absorption correction | θmax = 36.4°, θmin = 1.9° |
Tmin = 0.565, Tmax = 0.674 | h = −13→14 |
24022 measured reflections | k = −18→18 |
11866 independent reflections | l = −24→24 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.048 | H-atom parameters constrained |
wR(F2) = 0.135 | w = 1/[σ2(Fo2) + (0.067P)2 + 0.9437P] where P = (Fo2 + 2Fc2)/3 |
S = 1.00 | (Δ/σ)max = 0.001 |
11866 reflections | Δρmax = 3.29 e Å−3 |
271 parameters | Δρmin = −3.21 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
I1 | 1.31557 (4) | 1.17568 (3) | 0.95960 (2) | 0.01842 (6) | |
I2 | 0.90839 (4) | 0.72026 (3) | 0.34349 (2) | 0.02575 (7) | |
I3 | 0.70401 (4) | 0.46557 (3) | 0.32289 (2) | 0.02392 (7) | |
I4 | 1.11002 (5) | 0.96411 (4) | 0.36229 (3) | 0.04094 (10) | |
S1 | 0.84466 (19) | 0.62217 (15) | 0.57145 (9) | 0.0329 (3) | |
S2 | 1.20723 (14) | 0.84259 (10) | 0.92626 (9) | 0.0208 (2) | |
N1 | 0.6960 (5) | 0.7440 (3) | 0.6722 (3) | 0.0182 (6) | |
N2 | 0.9596 (4) | 0.6436 (3) | 0.8785 (2) | 0.0155 (6) | |
C1 | 0.6881 (6) | 0.6991 (5) | 0.5798 (3) | 0.0230 (9) | |
C2 | 0.5618 (7) | 0.7115 (5) | 0.5012 (3) | 0.0284 (10) | |
H2 | 0.5585 | 0.6770 | 0.4380 | 0.034* | |
C3 | 0.4450 (7) | 0.7737 (5) | 0.5178 (4) | 0.0304 (11) | |
H3 | 0.3569 | 0.7813 | 0.4655 | 0.037* | |
C4 | 0.4524 (6) | 0.8276 (5) | 0.6118 (3) | 0.0245 (9) | |
C5 | 0.3351 (7) | 0.8978 (6) | 0.6294 (4) | 0.0315 (11) | |
H5 | 0.2467 | 0.9054 | 0.5773 | 0.038* | |
C6 | 0.3465 (7) | 0.9549 (5) | 0.7202 (4) | 0.0311 (11) | |
H6 | 0.2663 | 1.0011 | 0.7307 | 0.037* | |
C7 | 0.4770 (6) | 0.9448 (4) | 0.7975 (3) | 0.0212 (8) | |
H7 | 0.4854 | 0.9853 | 0.8603 | 0.025* | |
C8 | 0.5925 (6) | 0.8774 (4) | 0.7836 (3) | 0.0184 (7) | |
H8 | 0.6809 | 0.8720 | 0.8366 | 0.022* | |
C9 | 0.5811 (5) | 0.8162 (4) | 0.6914 (3) | 0.0171 (7) | |
C10 | 0.8278 (6) | 0.7106 (4) | 0.7374 (3) | 0.0187 (7) | |
C11 | 0.9158 (7) | 0.6475 (5) | 0.6918 (3) | 0.0292 (10) | |
H11A | 1.0102 | 0.6193 | 0.7244 | 0.035* | |
C12 | 0.8692 (5) | 0.7385 (4) | 0.8445 (3) | 0.0160 (7) | |
H12A | 0.7618 | 0.7318 | 0.8619 | 0.019* | |
C13 | 0.9926 (6) | 0.8666 (4) | 0.8973 (3) | 0.0218 (8) | |
H131 | 0.9678 | 0.9006 | 0.9561 | 0.026* | |
H132 | 0.9805 | 0.9268 | 0.8563 | 0.026* | |
C14 | 1.1300 (5) | 0.6842 (4) | 0.9139 (3) | 0.0168 (7) | |
C15 | 1.2322 (6) | 0.6006 (4) | 0.9337 (3) | 0.0201 (8) | |
H15 | 1.3526 | 0.6296 | 0.9591 | 0.024* | |
C16 | 1.1557 (6) | 0.4760 (4) | 0.9159 (3) | 0.0192 (8) | |
H16 | 1.2243 | 0.4181 | 0.9273 | 0.023* | |
C17 | 0.9781 (6) | 0.4325 (4) | 0.8811 (3) | 0.0175 (7) | |
C18 | 0.8939 (6) | 0.3042 (4) | 0.8626 (3) | 0.0227 (8) | |
H18 | 0.9593 | 0.2440 | 0.8727 | 0.027* | |
C19 | 0.7197 (7) | 0.2661 (4) | 0.8304 (4) | 0.0281 (10) | |
H19 | 0.6654 | 0.1802 | 0.8192 | 0.034* | |
C20 | 0.6209 (6) | 0.3538 (5) | 0.8137 (4) | 0.0289 (10) | |
H20 | 0.5003 | 0.3261 | 0.7914 | 0.035* | |
C21 | 0.6959 (6) | 0.4793 (4) | 0.8293 (4) | 0.0234 (9) | |
H21 | 0.6283 | 0.5378 | 0.8178 | 0.028* | |
C22 | 0.8749 (5) | 0.5184 (4) | 0.8627 (3) | 0.0164 (7) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
I1 | 0.01814 (12) | 0.01580 (12) | 0.02318 (13) | 0.00530 (9) | 0.00869 (10) | 0.00471 (9) |
I2 | 0.02249 (14) | 0.03118 (16) | 0.02359 (14) | 0.00392 (12) | 0.00755 (11) | 0.00872 (12) |
I3 | 0.01888 (13) | 0.02608 (15) | 0.02563 (14) | 0.00545 (11) | 0.00703 (11) | 0.00317 (11) |
I4 | 0.03099 (19) | 0.0359 (2) | 0.0518 (2) | −0.00088 (15) | 0.00492 (16) | 0.02192 (17) |
S1 | 0.0430 (7) | 0.0488 (8) | 0.0179 (5) | 0.0302 (7) | 0.0143 (5) | 0.0084 (5) |
S2 | 0.0169 (5) | 0.0154 (4) | 0.0301 (6) | 0.0020 (4) | 0.0085 (4) | 0.0058 (4) |
N1 | 0.0193 (16) | 0.0189 (16) | 0.0183 (16) | 0.0065 (13) | 0.0078 (13) | 0.0041 (13) |
N2 | 0.0159 (15) | 0.0144 (15) | 0.0169 (15) | 0.0047 (12) | 0.0051 (12) | 0.0044 (12) |
C1 | 0.025 (2) | 0.031 (2) | 0.0169 (18) | 0.0089 (18) | 0.0088 (16) | 0.0076 (17) |
C2 | 0.033 (3) | 0.033 (3) | 0.018 (2) | 0.014 (2) | 0.0031 (18) | 0.0047 (18) |
C3 | 0.029 (2) | 0.041 (3) | 0.019 (2) | 0.015 (2) | 0.0026 (18) | 0.005 (2) |
C4 | 0.022 (2) | 0.030 (2) | 0.021 (2) | 0.0088 (18) | 0.0041 (17) | 0.0071 (17) |
C5 | 0.022 (2) | 0.047 (3) | 0.028 (2) | 0.016 (2) | 0.0058 (19) | 0.011 (2) |
C6 | 0.025 (2) | 0.040 (3) | 0.036 (3) | 0.021 (2) | 0.012 (2) | 0.012 (2) |
C7 | 0.0202 (19) | 0.0196 (19) | 0.027 (2) | 0.0068 (15) | 0.0108 (17) | 0.0049 (16) |
C8 | 0.0199 (18) | 0.0195 (18) | 0.0206 (18) | 0.0086 (15) | 0.0101 (15) | 0.0065 (15) |
C9 | 0.0169 (17) | 0.0176 (17) | 0.0193 (18) | 0.0070 (14) | 0.0062 (14) | 0.0071 (14) |
C10 | 0.0229 (19) | 0.0205 (19) | 0.0179 (18) | 0.0092 (16) | 0.0103 (15) | 0.0073 (15) |
C11 | 0.035 (3) | 0.041 (3) | 0.018 (2) | 0.022 (2) | 0.0085 (19) | 0.0102 (19) |
C12 | 0.0182 (17) | 0.0172 (17) | 0.0165 (17) | 0.0075 (14) | 0.0082 (14) | 0.0064 (14) |
C13 | 0.021 (2) | 0.0178 (19) | 0.027 (2) | 0.0058 (15) | 0.0083 (17) | 0.0050 (16) |
C14 | 0.0165 (17) | 0.0164 (17) | 0.0163 (17) | 0.0021 (14) | 0.0056 (14) | 0.0022 (14) |
C15 | 0.0167 (18) | 0.0201 (19) | 0.026 (2) | 0.0062 (15) | 0.0076 (16) | 0.0092 (16) |
C16 | 0.0211 (19) | 0.0192 (18) | 0.0213 (19) | 0.0098 (15) | 0.0085 (15) | 0.0065 (15) |
C17 | 0.0214 (19) | 0.0135 (16) | 0.0175 (17) | 0.0059 (14) | 0.0048 (15) | 0.0041 (13) |
C18 | 0.027 (2) | 0.0127 (17) | 0.026 (2) | 0.0042 (15) | 0.0056 (17) | 0.0022 (15) |
C19 | 0.026 (2) | 0.0153 (19) | 0.034 (3) | −0.0006 (16) | 0.0003 (19) | 0.0038 (18) |
C20 | 0.019 (2) | 0.025 (2) | 0.035 (3) | −0.0014 (17) | −0.0001 (18) | 0.009 (2) |
C21 | 0.0174 (19) | 0.0187 (19) | 0.030 (2) | 0.0028 (15) | 0.0022 (17) | 0.0063 (17) |
C22 | 0.0167 (17) | 0.0148 (16) | 0.0171 (17) | 0.0024 (13) | 0.0049 (14) | 0.0043 (13) |
Geometric parameters (Å, º) top
I1—S2 | 3.5796 (11) | C7—H7 | 0.9500 |
I2—I4 | 2.8613 (5) | C8—C9 | 1.401 (6) |
I2—I3 | 2.9651 (5) | C8—H8 | 0.9500 |
I3—S1 | 3.5985 (13) | C10—C11 | 1.345 (6) |
S1—C11 | 1.697 (5) | C10—C12 | 1.513 (6) |
S1—C1 | 1.717 (5) | C11—H11A | 0.9500 |
S2—C14 | 1.731 (4) | C12—C13 | 1.540 (6) |
S2—C13 | 1.819 (5) | C12—H12A | 1.0000 |
N1—C1 | 1.369 (6) | C13—H131 | 0.9900 |
N1—C10 | 1.420 (6) | C13—H132 | 0.9900 |
N1—C9 | 1.421 (5) | C14—C15 | 1.397 (6) |
N2—C14 | 1.344 (5) | C15—C16 | 1.370 (6) |
N2—C22 | 1.398 (5) | C15—H15 | 0.9500 |
N2—C12 | 1.495 (5) | C16—C17 | 1.401 (6) |
C1—C2 | 1.404 (7) | C16—H16 | 0.9500 |
C2—C3 | 1.352 (7) | C17—C22 | 1.420 (6) |
C2—H2 | 0.9500 | C17—C18 | 1.422 (6) |
C3—C4 | 1.415 (7) | C18—C19 | 1.370 (7) |
C3—H3 | 0.9500 | C18—H18 | 0.9500 |
C4—C5 | 1.416 (7) | C19—C20 | 1.408 (7) |
C4—C9 | 1.421 (6) | C19—H19 | 0.9500 |
C5—C6 | 1.369 (8) | C20—C21 | 1.379 (7) |
C5—H5 | 0.9500 | C20—H20 | 0.9500 |
C6—C7 | 1.401 (7) | C21—C22 | 1.408 (6) |
C6—H6 | 0.9500 | C21—H21 | 0.9500 |
C7—C8 | 1.369 (6) | | |
| | | |
I4—I2—I3 | 178.982 (16) | N1—C10—C12 | 126.7 (4) |
I2—I3—S1 | 72.59 (3) | C10—C11—S1 | 114.6 (4) |
C11—S1—C1 | 89.9 (2) | C10—C11—H11A | 122.7 |
C11—S1—I3 | 161.0 (2) | S1—C11—H11A | 122.7 |
C1—S1—I3 | 102.52 (16) | N2—C12—C10 | 107.3 (3) |
C14—S2—C13 | 91.2 (2) | N2—C12—C13 | 105.4 (3) |
C14—S2—I1 | 172.17 (15) | C10—C12—C13 | 114.1 (4) |
C13—S2—I1 | 81.85 (15) | N2—C12—H12A | 109.9 |
C1—N1—C10 | 111.7 (4) | C10—C12—H12A | 109.9 |
C1—N1—C9 | 119.4 (4) | C13—C12—H12A | 109.9 |
C10—N1—C9 | 128.9 (4) | C12—C13—S2 | 107.3 (3) |
C14—N2—C22 | 122.7 (4) | C12—C13—H131 | 110.3 |
C14—N2—C12 | 114.8 (3) | S2—C13—H131 | 110.3 |
C22—N2—C12 | 122.0 (3) | C12—C13—H132 | 110.3 |
N1—C1—C2 | 123.2 (4) | S2—C13—H132 | 110.3 |
N1—C1—S1 | 112.5 (3) | H131—C13—H132 | 108.5 |
C2—C1—S1 | 124.2 (4) | N2—C14—C15 | 120.8 (4) |
C3—C2—C1 | 118.3 (5) | N2—C14—S2 | 114.7 (3) |
C3—C2—H2 | 120.9 | C15—C14—S2 | 124.4 (3) |
C1—C2—H2 | 120.9 | C16—C15—C14 | 118.7 (4) |
C2—C3—C4 | 120.9 (5) | C16—C15—H15 | 120.6 |
C2—C3—H3 | 119.6 | C14—C15—H15 | 120.6 |
C4—C3—H3 | 119.6 | C15—C16—C17 | 121.3 (4) |
C3—C4—C5 | 121.1 (4) | C15—C16—H16 | 119.4 |
C3—C4—C9 | 120.9 (4) | C17—C16—H16 | 119.4 |
C5—C4—C9 | 117.9 (4) | C16—C17—C22 | 119.6 (4) |
C6—C5—C4 | 121.3 (5) | C16—C17—C18 | 122.9 (4) |
C6—C5—H5 | 119.4 | C22—C17—C18 | 117.4 (4) |
C4—C5—H5 | 119.4 | C19—C18—C17 | 120.9 (4) |
C5—C6—C7 | 119.8 (4) | C19—C18—H18 | 119.5 |
C5—C6—H6 | 120.1 | C17—C18—H18 | 119.5 |
C7—C6—H6 | 120.1 | C18—C19—C20 | 120.3 (4) |
C8—C7—C6 | 120.8 (4) | C18—C19—H19 | 119.9 |
C8—C7—H7 | 119.6 | C20—C19—H19 | 119.9 |
C6—C7—H7 | 119.6 | C21—C20—C19 | 121.3 (5) |
C7—C8—C9 | 120.3 (4) | C21—C20—H20 | 119.4 |
C7—C8—H8 | 119.8 | C19—C20—H20 | 119.4 |
C9—C8—H8 | 119.8 | C20—C21—C22 | 118.4 (4) |
C8—C9—C4 | 119.8 (4) | C20—C21—H21 | 120.8 |
C8—C9—N1 | 123.1 (4) | C22—C21—H21 | 120.8 |
C4—C9—N1 | 117.1 (4) | N2—C22—C21 | 121.6 (4) |
C11—C10—N1 | 111.2 (4) | N2—C22—C17 | 116.8 (4) |
C11—C10—C12 | 122.2 (4) | C21—C22—C17 | 121.6 (4) |
| | | |
C10—N1—C1—C2 | 175.5 (5) | C22—N2—C12—C10 | −72.2 (5) |
C9—N1—C1—C2 | −5.6 (7) | C14—N2—C12—C13 | −22.3 (5) |
C10—N1—C1—S1 | −2.5 (5) | C22—N2—C12—C13 | 165.8 (4) |
C9—N1—C1—S1 | 176.4 (3) | C11—C10—C12—N2 | −23.3 (6) |
C11—S1—C1—N1 | 1.5 (4) | N1—C10—C12—N2 | 156.1 (4) |
I3—S1—C1—N1 | 167.0 (3) | C11—C10—C12—C13 | 93.1 (6) |
C11—S1—C1—C2 | −176.5 (5) | N1—C10—C12—C13 | −87.5 (5) |
I3—S1—C1—C2 | −11.0 (5) | N2—C12—C13—S2 | 26.4 (4) |
N1—C1—C2—C3 | 1.8 (8) | C10—C12—C13—S2 | −91.1 (4) |
S1—C1—C2—C3 | 179.5 (4) | C14—S2—C13—C12 | −20.3 (3) |
C1—C2—C3—C4 | 1.5 (9) | I1—S2—C13—C12 | 163.2 (3) |
C2—C3—C4—C5 | 177.1 (6) | C22—N2—C14—C15 | 2.3 (6) |
C2—C3—C4—C9 | −0.9 (8) | C12—N2—C14—C15 | −169.5 (4) |
C3—C4—C5—C6 | −177.0 (6) | C22—N2—C14—S2 | 179.4 (3) |
C9—C4—C5—C6 | 1.1 (8) | C12—N2—C14—S2 | 7.5 (5) |
C4—C5—C6—C7 | 0.4 (9) | C13—S2—C14—N2 | 8.2 (3) |
C5—C6—C7—C8 | −0.7 (8) | C13—S2—C14—C15 | −174.9 (4) |
C6—C7—C8—C9 | −0.6 (7) | N2—C14—C15—C16 | 0.4 (7) |
C7—C8—C9—C4 | 2.0 (7) | S2—C14—C15—C16 | −176.4 (3) |
C7—C8—C9—N1 | −179.5 (4) | C14—C15—C16—C17 | −1.9 (7) |
C3—C4—C9—C8 | 175.8 (5) | C15—C16—C17—C22 | 0.8 (7) |
C5—C4—C9—C8 | −2.3 (7) | C15—C16—C17—C18 | −179.4 (4) |
C3—C4—C9—N1 | −2.8 (7) | C16—C17—C18—C19 | 178.7 (5) |
C5—C4—C9—N1 | 179.2 (4) | C22—C17—C18—C19 | −1.5 (7) |
C1—N1—C9—C8 | −172.7 (4) | C17—C18—C19—C20 | 0.9 (8) |
C10—N1—C9—C8 | 6.1 (7) | C18—C19—C20—C21 | 0.0 (9) |
C1—N1—C9—C4 | 5.8 (6) | C19—C20—C21—C22 | −0.2 (8) |
C10—N1—C9—C4 | −175.4 (4) | C14—N2—C22—C21 | 177.3 (4) |
C1—N1—C10—C11 | 2.5 (6) | C12—N2—C22—C21 | −11.4 (6) |
C9—N1—C10—C11 | −176.4 (5) | C14—N2—C22—C17 | −3.3 (6) |
C1—N1—C10—C12 | −177.0 (4) | C12—N2—C22—C17 | 167.9 (4) |
C9—N1—C10—C12 | 4.2 (7) | C20—C21—C22—N2 | 178.8 (4) |
N1—C10—C11—S1 | −1.4 (6) | C20—C21—C22—C17 | −0.5 (7) |
C12—C10—C11—S1 | 178.1 (4) | C16—C17—C22—N2 | 1.7 (6) |
C1—S1—C11—C10 | 0.0 (5) | C18—C17—C22—N2 | −178.1 (4) |
I3—S1—C11—C10 | −131.5 (5) | C16—C17—C22—C21 | −178.9 (4) |
C14—N2—C12—C10 | 99.7 (4) | C18—C17—C22—C21 | 1.3 (6) |
The free energy (kJ mol-1) and interatomic distances (Å) of the most and
least stable conformers for the intermediate iodine-derivative products.
Free energy was estimated by well-tempered metadynamics method with GAFF. top | (E)-2,3-diiodo derivatives of 2TQB | (E)-2,3-diiodo derivatives of 8TQB |
Emin | -260.9 | -292.8 |
Emax | -227.7 | -261.2 |
Rmin(N···C) | 3.794 | 3.333 |
Rmax(N···C) | 4.499 | 5.542 |
| | |
| 2TQB derivatives | 8TQB derivatives |
Emin | -162.6 | -159.0 |
Emax | -153.5 | -133.5 |
Rmin(N···C) | 3.226 | 3.629 |
Rmax(N···C) | 4.428 | 5.736 |