The peptide di-L-phenylalanine (FF) has emerged as a highly potent candidate for the development of novel nanomaterials. The unprotected peptide was dissolved in 1,1,1,3,3,3-hexafluoropropan-2-ol (HFIP) mixed with tetrahydrofuran (THF) and single crystals of the THF monosolvate, C18H20N2O3·C4H8O, were grown by slow evaporation in a `vial-in-closed-bottle' system. THF is a molecule that can only act as a hydrogen-bond acceptor. Thus, the hydrogen-bond patterns observed in the crystal structures at 100 and 299 K are different compared to that of crystals grown from water and methanol [Mason et al. (2014). ACS Nano. 8, 1243–1253].
Supporting information
CCDC references: 1041606; 1041605
For both structures, data collection: PROTEUM2 (Bruker, 2008); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015). Molecular graphics: COOT (Emsley et al., 2010) and SwissPDBViewer (Guex & Peitsch, 1997) for temperature_100K; COOT (Emsley et al., 2010), SwissPDBViewer (Guex & Peitsch, 1997) for 299K. Software used to prepare material for publication: CHEMDRAW (Mills, 2006), ORTEPIII (Burnett & Johnson, (1996), ORTEP-3 (Farrugia, 2012) and POV-RAY (Persistence of Vision Pty, 2004) for temperature_100K; CHEMDRAW (Mills, 2006), ORTEP-III (Burnett & Johnson, (1996), ORTEP-3 (Farrugia, 2012), POVRAY (Persistence of Vision, 2004) for 299K.
2-(2-Azaniumyl-3-phenylpropanamido)-3-phenylpropanoate tetrahydrofuran
monosolvate (temperature_100K)
top
Crystal data top
C18H20N2O3·C4H8O | Dx = 1.279 Mg m−3 |
Mr = 384.46 | Cu Kα radiation, λ = 1.54178 Å |
Orthorhombic, P212121 | Cell parameters from 19950 reflections |
a = 5.0591 (3) Å | θ = 3.2–75.0° |
b = 16.7533 (9) Å | µ = 0.71 mm−1 |
c = 23.5587 (13) Å | T = 100 K |
V = 1996.76 (19) Å3 | Needle, colourless |
Z = 4 | 0.2 × 0.02 × 0.02 mm |
F(000) = 824 | |
Data collection top
Bruker D8 Venture diffractometer | 3882 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube IµS | Rint = 0.037 |
ω and φ scans | θmax = 75.0°, θmin = 3.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | h = −6→5 |
Tmin = 0.867, Tmax = 1.0 | k = −20→20 |
19950 measured reflections | l = −29→29 |
3983 independent reflections | |
Refinement top
Refinement on F2 | Hydrogen site location: difference Fourier map |
Least-squares matrix: full | All H-atom parameters refined |
R[F2 > 2σ(F2)] = 0.040 | w = 1/[σ2(Fo2) + (0.0811P)2 + 0.8254P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.132 | (Δ/σ)max < 0.001 |
S = 1.09 | Δρmax = 0.33 e Å−3 |
3983 reflections | Δρmin = −0.52 e Å−3 |
365 parameters | Absolute structure: Flack x determined using 1558 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons et al., 2013) |
0 restraints | Absolute structure parameter: 0.01 (7) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N_1 | 0.7011 (5) | 0.41181 (13) | 0.25508 (10) | 0.0247 (5) | |
H1_1 | 0.634 (9) | 0.418 (2) | 0.2181 (17) | 0.037 (10)* | |
H2_1 | 0.554 (8) | 0.4204 (19) | 0.2785 (15) | 0.028 (8)* | |
H3_1 | 0.802 (9) | 0.456 (2) | 0.2611 (17) | 0.038 (10)* | |
CA_1 | 0.8469 (5) | 0.33605 (16) | 0.26229 (10) | 0.0215 (5) | |
HA_1 | 1.003 (6) | 0.3416 (16) | 0.2395 (12) | 0.014 (7)* | |
CB_1 | 0.9363 (6) | 0.32392 (19) | 0.32407 (11) | 0.0264 (6) | |
HB1_1 | 1.031 (8) | 0.369 (2) | 0.3360 (15) | 0.031 (9)* | |
HB2_1 | 1.036 (8) | 0.281 (2) | 0.3250 (14) | 0.028 (8)* | |
CG_1 | 0.7140 (5) | 0.31192 (16) | 0.36657 (10) | 0.0219 (5) | |
CD1_1 | 0.6224 (6) | 0.37571 (17) | 0.39916 (11) | 0.0295 (6) | |
HD1_1 | 0.696 (8) | 0.428 (2) | 0.3942 (15) | 0.032 (9)* | |
CD2_1 | 0.6024 (6) | 0.23730 (16) | 0.37516 (11) | 0.0262 (6) | |
HD2_1 | 0.670 (7) | 0.1918 (19) | 0.3535 (14) | 0.025 (8)* | |
CE1_1 | 0.4255 (7) | 0.36407 (19) | 0.43950 (12) | 0.0348 (7) | |
HE1_1 | 0.354 (9) | 0.410 (2) | 0.4629 (17) | 0.042 (11)* | |
CE2_1 | 0.4023 (7) | 0.22617 (19) | 0.41503 (12) | 0.0334 (7) | |
HE2_1 | 0.335 (8) | 0.176 (2) | 0.4227 (14) | 0.027 (8)* | |
CZ_1 | 0.3156 (6) | 0.2894 (2) | 0.44738 (12) | 0.0342 (7) | |
HZ_1 | 0.178 (8) | 0.2818 (19) | 0.4762 (15) | 0.025 (8)* | |
C_1 | 0.6746 (5) | 0.26717 (14) | 0.24147 (9) | 0.0178 (5) | |
O_1 | 0.4328 (3) | 0.27467 (10) | 0.23738 (7) | 0.0204 (4) | |
N_2 | 0.8062 (5) | 0.20008 (13) | 0.22992 (9) | 0.0205 (4) | |
H1_2 | 0.976 (9) | 0.198 (2) | 0.2355 (15) | 0.032 (9)* | |
CA_2 | 0.6691 (5) | 0.12561 (15) | 0.21594 (11) | 0.0211 (5) | |
HA_2 | 0.521 (7) | 0.1211 (18) | 0.2428 (13) | 0.020 (7)* | |
CB_2 | 0.5643 (5) | 0.12544 (16) | 0.15474 (11) | 0.0232 (5) | |
HB1_2 | 0.426 (8) | 0.172 (2) | 0.1526 (15) | 0.035 (9)* | |
HB2_2 | 0.464 (8) | 0.077 (2) | 0.1477 (14) | 0.030 (9)* | |
CG_2 | 0.7777 (5) | 0.13022 (15) | 0.10992 (10) | 0.0202 (5) | |
CD1_2 | 0.8903 (6) | 0.06088 (16) | 0.08756 (11) | 0.0261 (6) | |
HD1_2 | 0.819 (7) | 0.011 (2) | 0.0981 (14) | 0.025 (8)* | |
CD2_2 | 0.8706 (5) | 0.20353 (16) | 0.09002 (11) | 0.0236 (6) | |
HD2_2 | 0.795 (8) | 0.252 (2) | 0.1040 (15) | 0.030 (9)* | |
CE1_2 | 1.0834 (7) | 0.06497 (17) | 0.04618 (11) | 0.0296 (6) | |
HE1_2 | 1.158 (8) | 0.015 (2) | 0.0326 (15) | 0.033 (9)* | |
CE2_2 | 1.0649 (6) | 0.20758 (16) | 0.04853 (11) | 0.0260 (6) | |
HE2_2 | 1.130 (8) | 0.259 (2) | 0.0346 (16) | 0.036 (10)* | |
CZ_2 | 1.1738 (6) | 0.13813 (18) | 0.02669 (11) | 0.0268 (6) | |
HZ_2 | 1.306 (9) | 0.140 (2) | −0.0019 (15) | 0.036 (9)* | |
C_2 | 0.8528 (6) | 0.05438 (17) | 0.22780 (13) | 0.0303 (6) | |
O1_2 | 1.0761 (4) | 0.06787 (15) | 0.24732 (14) | 0.0531 (8) | |
O2_2 | 0.7655 (5) | −0.01370 (13) | 0.21644 (10) | 0.0408 (6) | |
O1_3 | 0.5411 (5) | 0.43110 (12) | 0.14131 (8) | 0.0319 (5) | |
C2_3 | 0.4997 (7) | 0.51361 (19) | 0.12622 (15) | 0.0349 (7) | |
H21_3 | 0.602 (8) | 0.530 (2) | 0.0883 (15) | 0.032 (9)* | |
H22_3 | 0.565 (8) | 0.543 (2) | 0.1581 (16) | 0.033 (9)* | |
C3_3 | 0.2088 (8) | 0.5202 (2) | 0.11332 (18) | 0.0453 (9) | |
H31_3 | 0.096 (11) | 0.527 (3) | 0.151 (2) | 0.061 (13)* | |
H32_3 | 0.176 (12) | 0.567 (3) | 0.088 (2) | 0.068 (15)* | |
C4_3 | 0.1529 (7) | 0.4396 (2) | 0.08492 (14) | 0.0361 (7) | |
H41_3 | 0.199 (8) | 0.441 (2) | 0.0433 (16) | 0.034 (9)* | |
H42_3 | −0.036 (11) | 0.422 (3) | 0.0910 (18) | 0.050 (12)* | |
C5_3 | 0.3320 (8) | 0.3832 (2) | 0.11731 (14) | 0.0392 (7) | |
H51_3 | 0.238 (10) | 0.360 (3) | 0.147 (2) | 0.057 (13)* | |
H52_3 | 0.432 (13) | 0.340 (3) | 0.088 (2) | 0.079 (16)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N_1 | 0.0286 (12) | 0.0240 (11) | 0.0213 (10) | −0.0093 (9) | −0.0023 (10) | −0.0016 (8) |
CA_1 | 0.0117 (11) | 0.0348 (13) | 0.0180 (11) | −0.0019 (10) | −0.0004 (9) | 0.0005 (9) |
CB_1 | 0.0150 (11) | 0.0443 (16) | 0.0199 (12) | −0.0024 (12) | −0.0036 (10) | −0.0005 (11) |
CG_1 | 0.0188 (12) | 0.0318 (13) | 0.0152 (11) | 0.0007 (10) | −0.0055 (9) | 0.0015 (9) |
CD1_1 | 0.0383 (17) | 0.0285 (13) | 0.0216 (12) | 0.0024 (12) | −0.0015 (11) | −0.0004 (10) |
CD2_1 | 0.0296 (15) | 0.0266 (13) | 0.0224 (12) | 0.0035 (11) | −0.0032 (11) | 0.0025 (10) |
CE1_1 | 0.0419 (17) | 0.0408 (16) | 0.0217 (12) | 0.0146 (15) | 0.0039 (12) | 0.0011 (11) |
CE2_1 | 0.0385 (17) | 0.0354 (15) | 0.0264 (13) | −0.0099 (13) | −0.0015 (12) | 0.0109 (11) |
CZ_1 | 0.0230 (14) | 0.0581 (19) | 0.0214 (12) | 0.0061 (14) | 0.0034 (11) | 0.0140 (13) |
C_1 | 0.0141 (10) | 0.0261 (11) | 0.0131 (10) | 0.0017 (9) | 0.0012 (9) | 0.0006 (8) |
O_1 | 0.0115 (8) | 0.0241 (8) | 0.0254 (8) | 0.0023 (7) | −0.0007 (7) | −0.0018 (7) |
N_2 | 0.0135 (10) | 0.0289 (11) | 0.0192 (9) | 0.0064 (8) | 0.0019 (8) | 0.0012 (8) |
CA_2 | 0.0167 (11) | 0.0242 (12) | 0.0224 (11) | 0.0052 (10) | 0.0052 (10) | 0.0025 (9) |
CB_2 | 0.0188 (12) | 0.0254 (12) | 0.0253 (12) | 0.0023 (11) | −0.0003 (10) | 0.0005 (9) |
CG_2 | 0.0182 (12) | 0.0257 (12) | 0.0166 (11) | 0.0019 (10) | −0.0046 (9) | −0.0017 (9) |
CD1_2 | 0.0329 (16) | 0.0234 (12) | 0.0218 (12) | 0.0000 (11) | −0.0039 (11) | −0.0006 (9) |
CD2_2 | 0.0231 (14) | 0.0255 (12) | 0.0223 (12) | 0.0038 (10) | −0.0011 (10) | 0.0010 (9) |
CE1_2 | 0.0400 (17) | 0.0272 (12) | 0.0216 (12) | 0.0090 (13) | −0.0010 (11) | −0.0040 (10) |
CE2_2 | 0.0294 (14) | 0.0269 (13) | 0.0218 (12) | −0.0010 (12) | 0.0003 (11) | 0.0041 (10) |
CZ_2 | 0.0269 (13) | 0.0373 (14) | 0.0161 (11) | 0.0046 (12) | 0.0010 (10) | 0.0012 (10) |
C_2 | 0.0247 (14) | 0.0315 (14) | 0.0347 (14) | 0.0106 (11) | 0.0142 (11) | 0.0139 (11) |
O1_2 | 0.0191 (10) | 0.0442 (12) | 0.096 (2) | 0.0045 (9) | 0.0019 (12) | 0.0399 (14) |
O2_2 | 0.0540 (15) | 0.0259 (10) | 0.0424 (12) | 0.0108 (10) | 0.0130 (11) | 0.0048 (9) |
O1_3 | 0.0323 (11) | 0.0333 (10) | 0.0302 (10) | −0.0043 (9) | −0.0078 (9) | 0.0008 (8) |
C2_3 | 0.0332 (17) | 0.0303 (14) | 0.0411 (16) | −0.0005 (12) | −0.0082 (13) | −0.0008 (13) |
C3_3 | 0.0332 (18) | 0.0443 (19) | 0.058 (2) | 0.0050 (15) | −0.0086 (17) | −0.0148 (16) |
C4_3 | 0.0275 (15) | 0.0455 (17) | 0.0352 (16) | −0.0025 (13) | −0.0022 (13) | −0.0093 (13) |
C5_3 | 0.0461 (19) | 0.0385 (16) | 0.0332 (15) | −0.0135 (15) | −0.0089 (15) | 0.0000 (12) |
Geometric parameters (Å, º) top
N_1—CA_1 | 1.478 (3) | CB_2—HB1_2 | 1.05 (4) |
N_1—H1_1 | 0.94 (4) | CB_2—HB2_2 | 0.98 (4) |
N_1—H2_1 | 0.94 (4) | CG_2—CD2_2 | 1.396 (4) |
N_1—H3_1 | 0.90 (4) | CG_2—CD1_2 | 1.397 (4) |
CA_1—C_1 | 1.527 (3) | CD1_2—CE1_2 | 1.382 (4) |
CA_1—CB_1 | 1.538 (3) | CD1_2—HD1_2 | 0.94 (3) |
CA_1—HA_1 | 0.96 (3) | CD2_2—CE2_2 | 1.388 (4) |
CB_1—CG_1 | 1.519 (4) | CD2_2—HD2_2 | 0.95 (4) |
CB_1—HB1_1 | 0.94 (4) | CE1_2—CZ_2 | 1.387 (4) |
CB_1—HB2_1 | 0.88 (4) | CE1_2—HE1_2 | 0.97 (4) |
CG_1—CD2_1 | 1.387 (4) | CE2_2—CZ_2 | 1.386 (4) |
CG_1—CD1_1 | 1.395 (4) | CE2_2—HE2_2 | 0.97 (4) |
CD1_1—CE1_1 | 1.390 (4) | CZ_2—HZ_2 | 0.95 (4) |
CD1_1—HD1_1 | 0.96 (4) | C_2—O1_2 | 1.240 (4) |
CD2_1—CE2_1 | 1.393 (4) | C_2—O2_2 | 1.252 (4) |
CD2_1—HD2_1 | 0.98 (3) | O1_3—C5_3 | 1.443 (4) |
CE1_1—CZ_1 | 1.381 (5) | O1_3—C2_3 | 1.443 (4) |
CE1_1—HE1_1 | 1.02 (4) | C2_3—C3_3 | 1.507 (5) |
CE2_1—CZ_1 | 1.377 (5) | C2_3—H21_3 | 1.07 (4) |
CE2_1—HE2_1 | 0.93 (4) | C2_3—H22_3 | 0.96 (4) |
CZ_1—HZ_1 | 0.98 (4) | C3_3—C4_3 | 1.534 (5) |
C_1—O_1 | 1.233 (3) | C3_3—H31_3 | 1.06 (5) |
C_1—N_2 | 1.335 (3) | C3_3—H32_3 | 1.00 (5) |
N_2—CA_2 | 1.465 (3) | C4_3—C5_3 | 1.515 (5) |
N_2—H1_2 | 0.87 (4) | C4_3—H41_3 | 1.01 (4) |
CA_2—CB_2 | 1.536 (3) | C4_3—H42_3 | 1.01 (5) |
CA_2—C_2 | 1.538 (3) | C5_3—H51_3 | 0.93 (5) |
CA_2—HA_2 | 0.99 (3) | C5_3—H52_3 | 1.12 (6) |
CB_2—CG_2 | 1.512 (4) | | |
| | | |
CA_1—N_1—H1_1 | 113 (2) | CA_2—CB_2—HB1_2 | 106 (2) |
CA_1—N_1—H2_1 | 117 (2) | CG_2—CB_2—HB2_2 | 107 (2) |
H1_1—N_1—H2_1 | 104 (3) | CA_2—CB_2—HB2_2 | 110 (2) |
CA_1—N_1—H3_1 | 114 (3) | HB1_2—CB_2—HB2_2 | 105 (3) |
H1_1—N_1—H3_1 | 104 (3) | CD2_2—CG_2—CD1_2 | 117.9 (2) |
H2_1—N_1—H3_1 | 103 (3) | CD2_2—CG_2—CB_2 | 121.4 (2) |
N_1—CA_1—C_1 | 109.1 (2) | CD1_2—CG_2—CB_2 | 120.7 (2) |
N_1—CA_1—CB_1 | 111.7 (2) | CE1_2—CD1_2—CG_2 | 120.9 (3) |
C_1—CA_1—CB_1 | 111.9 (2) | CE1_2—CD1_2—HD1_2 | 120 (2) |
N_1—CA_1—HA_1 | 105.2 (17) | CG_2—CD1_2—HD1_2 | 119 (2) |
C_1—CA_1—HA_1 | 111.3 (17) | CE2_2—CD2_2—CG_2 | 121.2 (2) |
CB_1—CA_1—HA_1 | 107.6 (17) | CE2_2—CD2_2—HD2_2 | 119 (2) |
CG_1—CB_1—CA_1 | 115.1 (2) | CG_2—CD2_2—HD2_2 | 120 (2) |
CG_1—CB_1—HB1_1 | 107 (2) | CD1_2—CE1_2—CZ_2 | 120.7 (3) |
CA_1—CB_1—HB1_1 | 109 (2) | CD1_2—CE1_2—HE1_2 | 118 (2) |
CG_1—CB_1—HB2_1 | 108 (2) | CZ_2—CE1_2—HE1_2 | 122 (2) |
CA_1—CB_1—HB2_1 | 108 (2) | CZ_2—CE2_2—CD2_2 | 120.1 (2) |
HB1_1—CB_1—HB2_1 | 111 (3) | CZ_2—CE2_2—HE2_2 | 119 (2) |
CD2_1—CG_1—CD1_1 | 118.4 (3) | CD2_2—CE2_2—HE2_2 | 121 (2) |
CD2_1—CG_1—CB_1 | 121.1 (2) | CE1_2—CZ_2—CE2_2 | 119.2 (3) |
CD1_1—CG_1—CB_1 | 120.5 (3) | CE1_2—CZ_2—HZ_2 | 120 (2) |
CE1_1—CD1_1—CG_1 | 120.4 (3) | CE2_2—CZ_2—HZ_2 | 121 (2) |
CE1_1—CD1_1—HD1_1 | 119 (2) | O1_2—C_2—O2_2 | 124.5 (3) |
CG_1—CD1_1—HD1_1 | 120 (2) | O1_2—C_2—CA_2 | 118.4 (3) |
CG_1—CD2_1—CE2_1 | 121.0 (3) | O2_2—C_2—CA_2 | 117.0 (3) |
CG_1—CD2_1—HD2_1 | 119 (2) | C5_3—O1_3—C2_3 | 109.2 (2) |
CE2_1—CD2_1—HD2_1 | 120 (2) | O1_3—C2_3—C3_3 | 105.2 (3) |
CZ_1—CE1_1—CD1_1 | 120.5 (3) | O1_3—C2_3—H21_3 | 112 (2) |
CZ_1—CE1_1—HE1_1 | 118 (2) | C3_3—C2_3—H21_3 | 107 (2) |
CD1_1—CE1_1—HE1_1 | 121 (2) | O1_3—C2_3—H22_3 | 105 (2) |
CZ_1—CE2_1—CD2_1 | 120.1 (3) | C3_3—C2_3—H22_3 | 117 (2) |
CZ_1—CE2_1—HE2_1 | 118 (2) | H21_3—C2_3—H22_3 | 111 (3) |
CD2_1—CE2_1—HE2_1 | 121 (2) | C2_3—C3_3—C4_3 | 101.8 (3) |
CE2_1—CZ_1—CE1_1 | 119.6 (3) | C2_3—C3_3—H31_3 | 111 (3) |
CE2_1—CZ_1—HZ_1 | 120.6 (19) | C4_3—C3_3—H31_3 | 111 (3) |
CE1_1—CZ_1—HZ_1 | 119.8 (19) | C2_3—C3_3—H32_3 | 110 (4) |
O_1—C_1—N_2 | 124.4 (2) | C4_3—C3_3—H32_3 | 114 (3) |
O_1—C_1—CA_1 | 120.9 (2) | H31_3—C3_3—H32_3 | 109 (4) |
N_2—C_1—CA_1 | 114.6 (2) | C5_3—C4_3—C3_3 | 102.6 (3) |
C_1—N_2—CA_2 | 121.8 (2) | C5_3—C4_3—H41_3 | 112 (2) |
C_1—N_2—H1_2 | 119 (2) | C3_3—C4_3—H41_3 | 111 (2) |
CA_2—N_2—H1_2 | 118 (2) | C5_3—C4_3—H42_3 | 108 (3) |
N_2—CA_2—CB_2 | 112.1 (2) | C3_3—C4_3—H42_3 | 112 (2) |
N_2—CA_2—C_2 | 109.5 (2) | H41_3—C4_3—H42_3 | 111 (4) |
CB_2—CA_2—C_2 | 112.2 (2) | O1_3—C5_3—C4_3 | 106.8 (3) |
N_2—CA_2—HA_2 | 106.4 (18) | O1_3—C5_3—H51_3 | 108 (3) |
CB_2—CA_2—HA_2 | 109.9 (19) | C4_3—C5_3—H51_3 | 109 (3) |
C_2—CA_2—HA_2 | 106.5 (18) | O1_3—C5_3—H52_3 | 106 (3) |
CG_2—CB_2—CA_2 | 114.1 (2) | C4_3—C5_3—H52_3 | 111 (3) |
CG_2—CB_2—HB1_2 | 114 (2) | H51_3—C5_3—H52_3 | 115 (4) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N_1—H1_1···O1_3 | 0.94 (4) | 1.88 (4) | 2.819 (3) | 173 (4) |
N_2—H1_2···O_1i | 0.87 (4) | 2.64 (4) | 3.412 (3) | 148 (3) |
N_1—H2_1···O2_2ii | 0.94 (4) | 1.96 (4) | 2.753 (4) | 141 (3) |
N_1—H3_1···O1_2iii | 0.90 (4) | 1.99 (4) | 2.848 (3) | 158 (4) |
N_1—H3_1···O2_2iii | 0.90 (4) | 2.31 (4) | 3.047 (3) | 139 (4) |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+2, y+1/2, −z+1/2. |
2-(2-Azaniumyl-3-phenylpropanamido)-3-phenylpropanoate tetrahydrofuran
monosolvate (299K)
top
Crystal data top
C18H20N2O3·C4H8O | Dx = 1.244 Mg m−3 |
Mr = 384.46 | Cu Kα radiation, λ = 1.54178 Å |
Orthorhombic, P212121 | Cell parameters from 10537 reflections |
a = 5.0827 (3) Å | θ = 3.2–60.4° |
b = 16.7903 (9) Å | µ = 0.69 mm−1 |
c = 24.0532 (12) Å | T = 299 K |
V = 2052.70 (19) Å3 | Needle, colorless |
Z = 4 | 0.2 × 0.02 × 0.02 mm |
F(000) = 824 | |
Data collection top
Bruker AXS D8 Venture diffractometer | 2526 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube IµS | Rint = 0.064 |
ω– and φ–scans | θmax = 60.4°, θmin = 3.2° |
Absorption correction: multi-scan SADABS (Bruker, 2008) | h = −5→5 |
Tmin = 0.770, Tmax = 1.0 | k = −18→15 |
10537 measured reflections | l = −23→26 |
2770 independent reflections | |
Refinement top
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.067 | w = 1/[σ2(Fo2) + (0.0971P)2 + 1.4119P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.189 | (Δ/σ)max = 0.010 |
S = 1.05 | Δρmax = 0.25 e Å−3 |
2770 reflections | Δρmin = −0.18 e Å−3 |
287 parameters | Absolute structure: Flack x determined using 966 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons, Flack and Wagner, Acta Cryst. B69 (2013) 249-259). |
0 restraints | Absolute structure parameter: 0.3 (3) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N_1 | 0.2946 (9) | 0.5927 (3) | 0.2567 (2) | 0.0563 (12) | |
H3_1 | 0.181 (13) | 0.536 (4) | 0.266 (3) | 0.082 (18)* | |
H2_1 | 0.478 (14) | 0.583 (3) | 0.275 (3) | 0.072 (17)* | |
H1_1 | 0.359 (12) | 0.591 (3) | 0.226 (3) | 0.050 (17)* | |
CA_1 | 0.1499 (9) | 0.6689 (3) | 0.2636 (2) | 0.0515 (13) | |
HA_1 | −0.0072 | 0.6666 | 0.2400 | 0.049 (13)* | |
CB_1 | 0.0599 (11) | 0.6806 (4) | 0.3231 (2) | 0.0601 (14) | |
HB2_1 | −0.0523 | 0.7273 | 0.3245 | 0.060 (16)* | |
HB1_1 | −0.0467 | 0.6352 | 0.3337 | 0.075 (18)* | |
CG_1 | 0.2725 (11) | 0.6905 (3) | 0.3656 (2) | 0.0579 (14) | |
CD1_1 | 0.3594 (16) | 0.6268 (4) | 0.3973 (3) | 0.082 (2) | |
HD1_1 | 0.2873 | 0.5765 | 0.3916 | 0.08 (2)* | |
CD2_1 | 0.3893 (14) | 0.7632 (4) | 0.3755 (3) | 0.0747 (18) | |
HD2_1 | 0.3379 | 0.8074 | 0.3549 | 0.09 (2)* | |
CE1_1 | 0.5522 (18) | 0.6370 (6) | 0.4374 (3) | 0.101 (3) | |
HE1_1 | 0.6075 | 0.5938 | 0.4586 | 0.13 (3)* | |
CE2_1 | 0.5814 (17) | 0.7715 (6) | 0.4157 (3) | 0.097 (2) | |
HE2_1 | 0.6567 | 0.8212 | 0.4217 | 0.11 (3)* | |
CZ_1 | 0.6606 (17) | 0.7099 (7) | 0.4458 (3) | 0.099 (3) | |
HZ_1 | 0.7903 | 0.7166 | 0.4727 | 0.10 (2)* | |
C_1 | 0.3211 (9) | 0.7368 (3) | 0.2428 (2) | 0.0434 (11) | |
O_1 | 0.5602 (6) | 0.7299 (2) | 0.23854 (16) | 0.0564 (10) | |
N_2 | 0.1939 (9) | 0.8039 (3) | 0.22991 (19) | 0.0515 (11) | |
H1_2 | 0.045 (12) | 0.807 (3) | 0.234 (2) | 0.050 (16)* | |
CA_2 | 0.3284 (10) | 0.8774 (3) | 0.2151 (2) | 0.0501 (12) | |
HA_2 | 0.4814 | 0.8823 | 0.2396 | 0.067 (16)* | |
CB_2 | 0.4310 (11) | 0.8754 (4) | 0.1553 (2) | 0.0591 (14) | |
HB2_2 | 0.5347 | 0.9230 | 0.1488 | 0.067 (17)* | |
HB1_2 | 0.5473 | 0.8300 | 0.1513 | 0.069 (17)* | |
CG_2 | 0.2215 (11) | 0.8704 (3) | 0.1114 (2) | 0.0537 (13) | |
CD1_2 | 0.1119 (14) | 0.9374 (4) | 0.0884 (3) | 0.0715 (17) | |
HD1_2 | 0.1683 | 0.9870 | 0.1007 | 0.040 (12)* | |
CD2_2 | 0.1287 (12) | 0.7983 (4) | 0.0913 (2) | 0.0671 (16) | |
HD2_2 | 0.1997 | 0.7513 | 0.1052 | 0.09 (2)* | |
CE1_2 | −0.0777 (17) | 0.9339 (5) | 0.0480 (3) | 0.090 (2) | |
HE1_2 | −0.1456 | 0.9807 | 0.0330 | 0.11 (3)* | |
CE2_2 | −0.0636 (15) | 0.7938 (5) | 0.0517 (3) | 0.0810 (19) | |
HE2_2 | −0.1243 | 0.7445 | 0.0398 | 0.11 (3)* | |
CZ_2 | −0.1665 (16) | 0.8621 (5) | 0.0296 (3) | 0.086 (2) | |
HZ_2 | −0.2960 | 0.8594 | 0.0024 | 0.11 (3)* | |
C_2 | 0.1521 (11) | 0.9496 (4) | 0.2257 (3) | 0.0609 (14) | |
O1_2 | −0.0707 (8) | 0.9384 (3) | 0.2439 (2) | 0.0898 (15) | |
O2_2 | 0.2435 (10) | 1.0170 (3) | 0.2143 (2) | 0.0885 (15) | |
O1_3 | 0.4738 (14) | 0.5690 (3) | 0.1451 (2) | 0.1086 (19) | |
C2_3 | 0.525 (3) | 0.4887 (5) | 0.1322 (4) | 0.130 (4) | |
H22_3 | 0.5333 | 0.4574 | 0.1660 | 0.156* | |
H21_3 | 0.3854 | 0.4676 | 0.1090 | 0.156* | |
C3_3 | 0.763 (3) | 0.4844 (7) | 0.1043 (8) | 0.197 (8) | |
H32_3 | 0.7454 | 0.4504 | 0.0719 | 0.236* | |
H31_3 | 0.8963 | 0.4618 | 0.1284 | 0.236* | |
C4_3 | 0.840 (2) | 0.5646 (6) | 0.0872 (6) | 0.139 (4) | |
H41_3 | 0.8104 | 0.5724 | 0.0477 | 0.39 (15)* | |
H42_3 | 1.0242 | 0.5743 | 0.0953 | 0.465* | |
C5_3 | 0.672 (2) | 0.6167 (6) | 0.1200 (4) | 0.122 (3) | |
H51_3 | 0.7742 | 0.6437 | 0.1483 | 0.36 (13)* | |
H52_3 | 0.5916 | 0.6567 | 0.0962 | 0.433* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N_1 | 0.050 (3) | 0.055 (3) | 0.064 (3) | −0.005 (2) | 0.003 (3) | 0.005 (2) |
CA_1 | 0.030 (2) | 0.066 (3) | 0.059 (3) | −0.001 (2) | −0.005 (2) | 0.003 (2) |
CB_1 | 0.040 (3) | 0.072 (4) | 0.067 (3) | 0.000 (3) | 0.007 (3) | 0.005 (3) |
CG_1 | 0.051 (3) | 0.066 (4) | 0.057 (3) | 0.000 (3) | 0.011 (3) | −0.004 (3) |
CD1_1 | 0.097 (5) | 0.074 (5) | 0.074 (4) | 0.004 (4) | −0.008 (4) | 0.006 (4) |
CD2_1 | 0.082 (5) | 0.068 (4) | 0.074 (4) | 0.001 (4) | 0.002 (4) | −0.009 (3) |
CE1_1 | 0.108 (6) | 0.127 (7) | 0.069 (4) | 0.046 (6) | −0.019 (5) | 0.002 (5) |
CE2_1 | 0.096 (5) | 0.104 (6) | 0.090 (5) | −0.021 (5) | 0.000 (5) | −0.038 (5) |
CZ_1 | 0.076 (5) | 0.145 (8) | 0.075 (5) | 0.013 (6) | −0.016 (4) | −0.040 (5) |
C_1 | 0.033 (2) | 0.048 (3) | 0.049 (3) | 0.005 (2) | −0.004 (2) | 0.003 (2) |
O_1 | 0.0317 (16) | 0.052 (2) | 0.085 (3) | 0.0049 (15) | −0.0010 (18) | 0.0098 (18) |
N_2 | 0.030 (2) | 0.058 (3) | 0.067 (3) | 0.005 (2) | 0.001 (2) | 0.004 (2) |
CA_2 | 0.037 (2) | 0.048 (3) | 0.065 (3) | 0.005 (2) | −0.006 (2) | −0.002 (2) |
CB_2 | 0.043 (3) | 0.057 (3) | 0.078 (3) | 0.001 (3) | 0.004 (3) | 0.007 (3) |
CG_2 | 0.052 (3) | 0.054 (3) | 0.055 (3) | 0.003 (3) | 0.016 (2) | 0.003 (3) |
CD1_2 | 0.091 (5) | 0.055 (4) | 0.068 (4) | −0.008 (3) | −0.001 (4) | −0.004 (3) |
CD2_2 | 0.070 (4) | 0.058 (4) | 0.074 (4) | 0.008 (3) | 0.005 (3) | −0.005 (3) |
CE1_2 | 0.114 (6) | 0.092 (5) | 0.066 (4) | 0.032 (5) | −0.016 (4) | 0.005 (4) |
CE2_2 | 0.084 (4) | 0.084 (5) | 0.075 (4) | −0.008 (4) | −0.003 (4) | −0.015 (4) |
CZ_2 | 0.086 (5) | 0.115 (6) | 0.057 (4) | 0.014 (5) | −0.005 (4) | −0.015 (4) |
C_2 | 0.050 (3) | 0.057 (4) | 0.075 (4) | 0.002 (3) | −0.017 (3) | −0.011 (3) |
O1_2 | 0.048 (2) | 0.075 (3) | 0.147 (4) | 0.007 (2) | 0.009 (3) | −0.028 (3) |
O2_2 | 0.081 (3) | 0.057 (3) | 0.127 (4) | 0.002 (2) | −0.020 (3) | −0.003 (2) |
O1_3 | 0.133 (5) | 0.093 (4) | 0.100 (4) | −0.007 (4) | 0.033 (4) | −0.001 (3) |
C2_3 | 0.173 (10) | 0.080 (6) | 0.138 (7) | −0.004 (6) | 0.057 (8) | −0.011 (5) |
C3_3 | 0.170 (12) | 0.114 (9) | 0.31 (2) | 0.011 (9) | 0.120 (14) | 0.001 (10) |
C4_3 | 0.109 (7) | 0.121 (8) | 0.188 (11) | −0.008 (6) | 0.050 (8) | 0.017 (7) |
C5_3 | 0.130 (8) | 0.119 (7) | 0.118 (6) | −0.026 (7) | 0.050 (7) | −0.013 (6) |
Geometric parameters (Å, º) top
N_1—CA_1 | 1.485 (7) | CB_2—HB2_2 | 0.9700 |
N_1—H3_1 | 1.14 (7) | CB_2—HB1_2 | 0.9700 |
N_1—H2_1 | 1.04 (7) | CG_2—CD1_2 | 1.370 (8) |
N_1—H1_1 | 0.80 (6) | CG_2—CD2_2 | 1.387 (8) |
CA_1—CB_1 | 1.516 (8) | CD1_2—CE1_2 | 1.371 (10) |
CA_1—C_1 | 1.519 (7) | CD1_2—HD1_2 | 0.9300 |
CA_1—HA_1 | 0.9800 | CD2_2—CE2_2 | 1.367 (9) |
CB_1—CG_1 | 1.495 (8) | CD2_2—HD2_2 | 0.9300 |
CB_1—HB2_1 | 0.9700 | CE1_2—CZ_2 | 1.361 (10) |
CB_1—HB1_1 | 0.9700 | CE1_2—HE1_2 | 0.9300 |
CG_1—CD2_1 | 1.378 (8) | CE2_2—CZ_2 | 1.365 (10) |
CG_1—CD1_1 | 1.388 (9) | CE2_2—HE2_2 | 0.9300 |
CD1_1—CE1_1 | 1.386 (11) | CZ_2—HZ_2 | 0.9300 |
CD1_1—HD1_1 | 0.9300 | C_2—O1_2 | 1.228 (7) |
CD2_1—CE2_1 | 1.378 (11) | C_2—O2_2 | 1.254 (7) |
CD2_1—HD2_1 | 0.9300 | O1_3—C2_3 | 1.407 (10) |
CE1_1—CZ_1 | 1.358 (12) | O1_3—C5_3 | 1.422 (11) |
CE1_1—HE1_1 | 0.9300 | C2_3—C3_3 | 1.384 (16) |
CE2_1—CZ_1 | 1.324 (12) | C2_3—H22_3 | 0.9700 |
CE2_1—HE2_1 | 0.9300 | C2_3—H21_3 | 0.9700 |
CZ_1—HZ_1 | 0.9300 | C3_3—C4_3 | 1.460 (15) |
C_1—O_1 | 1.224 (6) | C3_3—H32_3 | 0.9700 |
C_1—N_2 | 1.335 (6) | C3_3—H31_3 | 0.9700 |
N_2—CA_2 | 1.455 (7) | C4_3—C5_3 | 1.459 (13) |
N_2—H1_2 | 0.77 (6) | C4_3—H41_3 | 0.9700 |
CA_2—C_2 | 1.529 (8) | C4_3—H42_3 | 0.9700 |
CA_2—CB_2 | 1.532 (7) | C5_3—H51_3 | 0.9700 |
CA_2—HA_2 | 0.9800 | C5_3—H52_3 | 0.9700 |
CB_2—CG_2 | 1.501 (8) | | |
| | | |
CA_1—N_1—H3_1 | 117 (3) | CA_2—CB_2—HB2_2 | 108.5 |
CA_1—N_1—H2_1 | 122 (3) | CG_2—CB_2—HB1_2 | 108.6 |
H3_1—N_1—H2_1 | 103 (4) | CA_2—CB_2—HB1_2 | 108.6 |
CA_1—N_1—H1_1 | 110 (4) | HB2_2—CB_2—HB1_2 | 107.5 |
H3_1—N_1—H1_1 | 110 (5) | CD1_2—CG_2—CD2_2 | 116.0 (5) |
H2_1—N_1—H1_1 | 91 (5) | CD1_2—CG_2—CB_2 | 121.7 (5) |
N_1—CA_1—CB_1 | 111.5 (5) | CD2_2—CG_2—CB_2 | 122.3 (5) |
N_1—CA_1—C_1 | 109.0 (4) | CE1_2—CD1_2—CG_2 | 122.5 (6) |
CB_1—CA_1—C_1 | 112.7 (4) | CE1_2—CD1_2—HD1_2 | 118.8 |
N_1—CA_1—HA_1 | 107.8 | CG_2—CD1_2—HD1_2 | 118.8 |
CB_1—CA_1—HA_1 | 107.8 | CE2_2—CD2_2—CG_2 | 122.2 (6) |
C_1—CA_1—HA_1 | 107.8 | CE2_2—CD2_2—HD2_2 | 118.9 |
CG_1—CB_1—CA_1 | 116.2 (4) | CG_2—CD2_2—HD2_2 | 118.9 |
CG_1—CB_1—HB2_1 | 108.2 | CZ_2—CE1_2—CD1_2 | 120.0 (7) |
CA_1—CB_1—HB2_1 | 108.2 | CZ_2—CE1_2—HE1_2 | 120.0 |
CG_1—CB_1—HB1_1 | 108.2 | CD1_2—CE1_2—HE1_2 | 120.0 |
CA_1—CB_1—HB1_1 | 108.2 | CZ_2—CE2_2—CD2_2 | 119.9 (7) |
HB2_1—CB_1—HB1_1 | 107.4 | CZ_2—CE2_2—HE2_2 | 120.1 |
CD2_1—CG_1—CD1_1 | 116.7 (6) | CD2_2—CE2_2—HE2_2 | 120.0 |
CD2_1—CG_1—CB_1 | 122.0 (6) | CE1_2—CZ_2—CE2_2 | 119.4 (7) |
CD1_1—CG_1—CB_1 | 121.3 (6) | CE1_2—CZ_2—HZ_2 | 120.3 |
CE1_1—CD1_1—CG_1 | 120.8 (7) | CE2_2—CZ_2—HZ_2 | 120.3 |
CE1_1—CD1_1—HD1_1 | 119.6 | O1_2—C_2—O2_2 | 123.9 (6) |
CG_1—CD1_1—HD1_1 | 119.6 | O1_2—C_2—CA_2 | 118.6 (6) |
CG_1—CD2_1—CE2_1 | 121.1 (7) | O2_2—C_2—CA_2 | 117.5 (5) |
CG_1—CD2_1—HD2_1 | 119.4 | C2_3—O1_3—C5_3 | 108.5 (8) |
CE2_1—CD2_1—HD2_1 | 119.4 | C3_3—C2_3—O1_3 | 108.7 (10) |
CZ_1—CE1_1—CD1_1 | 120.2 (8) | C3_3—C2_3—H22_3 | 109.8 |
CZ_1—CE1_1—HE1_1 | 120.0 | O1_3—C2_3—H22_3 | 109.9 |
CD1_1—CE1_1—HE1_1 | 119.9 | C3_3—C2_3—H21_3 | 110.1 |
CZ_1—CE2_1—CD2_1 | 121.3 (8) | O1_3—C2_3—H21_3 | 110.0 |
CZ_1—CE2_1—HE2_1 | 119.3 | H22_3—C2_3—H21_3 | 108.3 |
CD2_1—CE2_1—HE2_1 | 119.4 | C2_3—C3_3—C4_3 | 108.6 (10) |
CE2_1—CZ_1—CE1_1 | 119.9 (7) | C2_3—C3_3—H32_3 | 109.8 |
CE2_1—CZ_1—HZ_1 | 120.1 | C4_3—C3_3—H32_3 | 109.5 |
CE1_1—CZ_1—HZ_1 | 120.0 | C2_3—C3_3—H31_3 | 110.1 |
O_1—C_1—N_2 | 122.7 (5) | C4_3—C3_3—H31_3 | 110.5 |
O_1—C_1—CA_1 | 121.7 (4) | H32_3—C3_3—H31_3 | 108.3 |
N_2—C_1—CA_1 | 115.6 (4) | C5_3—C4_3—C3_3 | 104.3 (9) |
C_1—N_2—CA_2 | 123.0 (4) | C5_3—C4_3—H41_3 | 110.4 |
C_1—N_2—H1_2 | 120 (4) | C3_3—C4_3—H41_3 | 110.4 |
CA_2—N_2—H1_2 | 116 (4) | C5_3—C4_3—H42_3 | 111.3 |
N_2—CA_2—C_2 | 110.9 (4) | C3_3—C4_3—H42_3 | 111.5 |
N_2—CA_2—CB_2 | 111.8 (4) | H41_3—C4_3—H42_3 | 109.0 |
C_2—CA_2—CB_2 | 112.0 (4) | O1_3—C5_3—C4_3 | 107.5 (8) |
N_2—CA_2—HA_2 | 107.3 | O1_3—C5_3—H51_3 | 110.2 |
C_2—CA_2—HA_2 | 107.3 | C4_3—C5_3—H51_3 | 110.7 |
CB_2—CA_2—HA_2 | 107.3 | O1_3—C5_3—H52_3 | 110.2 |
CG_2—CB_2—CA_2 | 114.8 (4) | C4_3—C5_3—H52_3 | 109.8 |
CG_2—CB_2—HB2_2 | 108.6 | H51_3—C5_3—H52_3 | 108.4 |
Torsion angles of FF at 100K topχ1(1) | N_1 - CA_1 - CB_1 - CG_1 | 66.45 (30) |
χ2(1) | CA_1 - CB_1 - CG_1 - CD1_1 | -97.88 (30) |
χ3(1) | CA_1 - CB_1 - CG_1 - CD2_1 | 83.96 (33) |
ψ(1) | N_1 - CA_1 - C_1 - N_2 | 161.11 (20) |
ω(1) | CA_2 - N_2 - C_1 - CA_1 | 172.71 (20) |
χ1(2) | N_2 - CA_2 - CB_2 - CG_2 | 63.31 (27) |
χ2(2) | CA_2 - CB_2 - CG_2 - CD1_2 | 90.44 (29) |
χ3(2) | CA_2 - CB_2 - CG_2 - CD2_2 | -88.84 (29) |
φ(2) | C_1 - N_2 - CA_2 - C_2 | -157.85 (22) |