The title compound, C6H13O3P, displays a crystallographic mirror plane. Bond lengths in the phosphonic acid moiety are P-O = 1.5557 (13) Å and P=O = 1.5089 (18) Å. The molecules are linked via intermolecular hydrogen bonding to form a one-dimensional chain of fused rings. There are no significant contacts between planes.
Supporting information
CCDC reference: 183034
Cyclohexylphosphonic acid was heated in tetrahydrofurane until most of the solid
was dissolved. Crystals suitable for X-ray diffraction analysis were obtained
by slowly cooling of the solution containing a few drops of hexane.
All H atoms were visible in difference maps. The hydroxyl H atom was refined
isotropically, while those attached to C atoms were positioned geometrically,
with C—H = 0.98–0.99 Å, and refined as riding atoms, with
Uiso(H) = 1.2Ueq(C). Please check restraints.
Data collection: SMART (Siemens, 1996); cell refinement: SMART Query or SAINT?; data reduction: SAINT (Siemens, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990) Query or SHELXTL?; program(s) used to refine structure: SHELXL97 (Sheldrick, 1997) Query or SHELXTL?; molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXL97 Query or SHELXTL?.
Cyclohexylphosphonic acid
top
Crystal data top
C6H13O3P | F(000) = 176 |
Mr = 164.13 | Dx = 1.351 Mg m−3 |
Monoclinic, P21/m | Mo Kα radiation, λ = 0.71073 Å |
a = 6.8193 (14) Å | Cell parameters from 75 reflections |
b = 6.7291 (13) Å | θ = 3.4–19.5° |
c = 9.0902 (18) Å | µ = 0.29 mm−1 |
β = 104.72 (3)° | T = 203 K |
V = 403.43 (14) Å3 | Needle, colourless |
Z = 2 | 0.4 × 0.1 × 0.1 mm |
Data collection top
Bruker SMART CCD 1000 area-detector diffractometer | 762 independent reflections |
Radiation source: fine-focus sealed tube | 697 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
ω scans | θmax = 25.0°, θmin = 3.1° |
Absorption correction: empirical (using intensity measurements) (blessing, 1995) ? | h = −6→8 |
Tmin = 0.890, Tmax = 0.971 | k = −7→7 |
1901 measured reflections | l = −10→8 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.037 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | w = 1/[σ2(Fo2) + (0.0556P)2 + 0.1287P] where P = (Fo2 + 2Fc2)/3 |
762 reflections | (Δ/σ)max = 0.001 |
56 parameters | Δρmax = 0.58 e Å−3 |
0 restraints | Δρmin = −0.35 e Å−3 |
Crystal data top
C6H13O3P | V = 403.43 (14) Å3 |
Mr = 164.13 | Z = 2 |
Monoclinic, P21/m | Mo Kα radiation |
a = 6.8193 (14) Å | µ = 0.29 mm−1 |
b = 6.7291 (13) Å | T = 203 K |
c = 9.0902 (18) Å | 0.4 × 0.1 × 0.1 mm |
β = 104.72 (3)° | |
Data collection top
Bruker SMART CCD 1000 area-detector diffractometer | 762 independent reflections |
Absorption correction: empirical (using intensity measurements) (blessing, 1995) ? | 697 reflections with I > 2σ(I) |
Tmin = 0.890, Tmax = 0.971 | Rint = 0.024 |
1901 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.037 | 0 restraints |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | Δρmax = 0.58 e Å−3 |
762 reflections | Δρmin = −0.35 e Å−3 |
56 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
P1 | 0.67983 (9) | 0.7500 | 0.49921 (7) | 0.0247 (3) | |
C1 | 0.7825 (4) | 0.7500 | 0.3359 (3) | 0.0271 (6) | |
H1 | 0.9321 | 0.7500 | 0.3728 | 0.033* | |
O1 | 0.4511 (3) | 0.7500 | 0.45263 (19) | 0.0284 (5) | |
O2 | 0.7690 (2) | 0.5687 (2) | 0.60038 (14) | 0.0321 (4) | |
C2 | 0.7202 (3) | 0.5615 (3) | 0.2398 (2) | 0.0341 (5) | |
H2 | 0.7706 | 0.4442 | 0.3017 | 0.041* | |
H3 | 0.5720 | 0.5531 | 0.2076 | 0.041* | |
C4 | 0.7431 (5) | 0.7500 | 0.0045 (3) | 0.0390 (7) | |
H6 | 0.8075 | 0.7500 | −0.0803 | 0.047* | |
H7 | 0.5958 | 0.7500 | −0.0380 | 0.047* | |
C3 | 0.8051 (3) | 0.5631 (3) | 0.0998 (2) | 0.0394 (5) | |
H4 | 0.9533 | 0.5555 | 0.1322 | 0.047* | |
H5 | 0.7557 | 0.4459 | 0.0374 | 0.047* | |
H8 | 0.700 (4) | 0.473 (4) | 0.584 (3) | 0.053 (7)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
P1 | 0.0279 (4) | 0.0167 (4) | 0.0280 (4) | 0.000 | 0.0042 (3) | 0.000 |
C1 | 0.0294 (13) | 0.0203 (13) | 0.0311 (13) | 0.000 | 0.0066 (11) | 0.000 |
O1 | 0.0296 (10) | 0.0181 (9) | 0.0367 (10) | 0.000 | 0.0071 (7) | 0.000 |
O2 | 0.0341 (8) | 0.0226 (8) | 0.0359 (7) | −0.0007 (6) | 0.0020 (6) | 0.0064 (5) |
C2 | 0.0465 (12) | 0.0195 (10) | 0.0365 (10) | 0.0003 (8) | 0.0108 (8) | −0.0023 (7) |
C4 | 0.0449 (17) | 0.0408 (17) | 0.0321 (14) | 0.000 | 0.0114 (12) | 0.000 |
C3 | 0.0494 (12) | 0.0328 (12) | 0.0367 (10) | 0.0050 (9) | 0.0124 (9) | −0.0065 (8) |
Geometric parameters (Å, º) top
P1—O1 | 1.5089 (18) | C2—H2 | 0.9800 |
P1—O2i | 1.5557 (13) | C2—H3 | 0.9800 |
P1—O2 | 1.5557 (13) | C4—C3i | 1.525 (3) |
P1—C1 | 1.795 (3) | C4—C3 | 1.525 (3) |
C1—C2 | 1.537 (2) | C4—H6 | 0.9800 |
C1—C2i | 1.537 (2) | C4—H7 | 0.9800 |
C1—H1 | 0.9900 | C3—H4 | 0.9800 |
O2—H8 | 0.79 (3) | C3—H5 | 0.9800 |
C2—C3 | 1.526 (3) | | |
| | | |
O1—P1—O2i | 112.76 (7) | C3—C2—H3 | 109.4 |
O1—P1—O2 | 112.76 (7) | C1—C2—H3 | 109.4 |
O2i—P1—O2 | 103.32 (11) | H2—C2—H3 | 108.0 |
O1—P1—C1 | 111.13 (11) | C3i—C4—C3 | 111.1 (2) |
O2i—P1—C1 | 108.23 (7) | C3i—C4—H6 | 109.4 |
O2—P1—C1 | 108.23 (7) | C3—C4—H6 | 109.4 |
C2—C1—C2i | 111.2 (2) | C3i—C4—H7 | 109.4 |
C2—C1—P1 | 111.14 (12) | C3—C4—H7 | 109.4 |
C2i—C1—P1 | 111.14 (12) | H6—C4—H7 | 108.0 |
C2—C1—H1 | 107.7 | C4—C3—C2 | 111.74 (17) |
C2i—C1—H1 | 107.7 | C4—C3—H4 | 109.3 |
P1—C1—H1 | 107.7 | C2—C3—H4 | 109.3 |
P1—O2—H8 | 113.8 (19) | C4—C3—H5 | 109.3 |
C3—C2—C1 | 111.08 (17) | C2—C3—H5 | 109.3 |
C3—C2—H2 | 109.4 | H4—C3—H5 | 107.9 |
C1—C2—H2 | 109.4 | | |
| | | |
H8—O2—P1—O2i | 151.6 (19) | | |
Symmetry code: (i) x, −y+3/2, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H8···O1ii | 0.79 (3) | 1.80 (3) | 2.5915 (17) | 178 (3) |
Symmetry code: (ii) −x+1, −y+1, −z+1. |
Experimental details
Crystal data |
Chemical formula | C6H13O3P |
Mr | 164.13 |
Crystal system, space group | Monoclinic, P21/m |
Temperature (K) | 203 |
a, b, c (Å) | 6.8193 (14), 6.7291 (13), 9.0902 (18) |
β (°) | 104.72 (3) |
V (Å3) | 403.43 (14) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.29 |
Crystal size (mm) | 0.4 × 0.1 × 0.1 |
|
Data collection |
Diffractometer | Bruker SMART CCD 1000 area-detector diffractometer |
Absorption correction | Empirical (using intensity measurements) (Blessing, 1995) |
Tmin, Tmax | 0.890, 0.971 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1901, 762, 697 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.595 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.103, 1.16 |
No. of reflections | 762 |
No. of parameters | 56 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.58, −0.35 |
Selected geometric parameters (Å, º) topP1—O1 | 1.5089 (18) | P1—C1 | 1.795 (3) |
P1—O2 | 1.5557 (13) | | |
| | | |
O1—P1—O2 | 112.76 (7) | C2—C1—P1 | 111.14 (12) |
O1—P1—C1 | 111.13 (11) | P1—O2—H8 | 113.8 (19) |
O2—P1—C1 | 108.23 (7) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H8···O1i | 0.79 (3) | 1.80 (3) | 2.5915 (17) | 178 (3) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Cyclohexylphosphonic acid, (I), is one of the simplest phosphonic acids. These acids find increasing use in the syntheses of organophosphorus compounds, and in organometallic chemistry as stable bulky ligands. Phosphonates exhibit a rich oxo-cluster chemistry with many different structures, e.g. a tert-butylphosphonato-zinc cluster (Roesky & Walawalkar, 1999) or a methylphosphonato-gallium cluster (Mason et al., 1998). The present structure determination of (I) was undertaken firstly because there are few published structures of aliphatic phosphonic acids, and secondly to investigate the nature of the O—H···O hydrogen-bond interactions in the solid state. \sch
The molecule of (I), which displays crystallographic mirror symmetry (the mirror plane passes through atoms P1, O1 and C4), is shown in Fig. 1, with the associated dimensions given in Table 1. The P1═O1 bond length is 1.5089 (18) Å. Within experimental error, this is similar to the values in benzenephosphonic acid [1.496 (4) Å; Weakley, 1976], phosphonoacetic acid [1.494 (2) Å; Lis, 1997] and 4-methyl-2,6-bis(phosphonomethyl)phenol dihydrate [1.4981 (13) and 1.5015 (14) Å; Ferguson et al., 1993].
The other two P—O distances, which are symmetry-equivalent, are 1.5557 (13) Å. A search of the October 2001 release of the Cambridge Structural Database (CSD; Allen & Kennard, 1993) for structures containing the C—P═ O(—OH)2 fragment revealed only a few aliphatic phosphonic acids. The P—O distances are in agreement with the reported standard bond length of 1.503 (6) Å for P═O and 1.57 (1) Å for P—O (Allen et al., 1987), e.g. 1-hydroxycyclohexanephosphonic acid (Ohms et al., 1996) shows two P—O distances of 1.548 (2) and 1.542 (2) Å, and a P═O bond length of 1.495 (2) Å.
The results of theoretical studies for free cyclohexylphosphonic acid (6–31G** using BL3YP in TITAN; Wavefunction, 1999) Query are not exactly identical with the present experimental determination of the molecular structure of (I) in the solid state. The O—P—O angle (113 and 105°), P═O distance (1.49 Å) and P—O (1.57 Å) distances are very similar, within experimental error. However, the calculations predict a value for the H8—O2—P1—O2A dihedral angle of 103.5°, significantly different from the observed H8—O2—P1—O2 dihedral angle of 151.6 (19)°. This is clearly a consequence of the molecular packing in (I).
There is one short O—H···O hydrogen bond, with O2···O1 2.5915 (17) Å, consistent with the values of 2.458 (2)–2.753 (2) Å in 4-methyl-2,6-bis(phosphonomethyl)phenol dihydrate (Ferguson et al., 1993). A search of the CSD revealed that more than 80% of phosphonic acids have P—O—H···O═P systems, with O···O distances in the range 2.5–2.6 Å. Each P═O O atom is an acceptor of two intermolecular hydrogen bonds (Table 2).
For molecules of the type R—PO(OH)2, three-dimensional networks, planes or chains of hydrogen bonds have been observed. Examples are a chain structure for 1-(benzyloxycarbonylamino)ethylphosphonic acid (Chadha & Oesapay 1995), a double-layer structure for benzenephosphonic acid (Weakley, 1976) or a network for 2-fluorobenzylphosphonic acid (Langley et al., 1996). In the case of (I), the hydrogen bonding leads to eight-membered rings, which form a a one-dimensional chain with oppositely oriented cyclohexyl groups. No intermolecular C—H···O hydrogen bonds are observed in (I), nor are any other significant contacts between the layers.