In the title compound, C21H44S2, the molecular skeleton including both terminal S atoms has an all-trans conformation. The molecules form layers with a thickness of c/2 and the long axis of the molecule is inclined to the ab plane in the crystal structure. This molecular arrangement is similar to that of the smectic C structure of liquid crystals.
Supporting information
CCDC reference: 264082
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.004 Å
- R factor = 0.056
- wR factor = 0.123
- Data-to-parameter ratio = 16.3
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT026_ALERT_3_C Ratio Observed / Unique Reflections too Low .... 46 Perc.
PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.96
PLAT063_ALERT_3_C Crystal Probably too Large for Beam Size ....... 0.65 mm
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.32
PLAT322_ALERT_2_C Check Hybridisation of S2 in Main Residue . ?
PLAT420_ALERT_2_C D-H Without Acceptor S1 - H1S ... ?
PLAT420_ALERT_2_C D-H Without Acceptor S2 - H2S ... ?
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
7 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
4 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation,
1992); cell refinement: MSC/AFC Diffractometer Control Software; data reduction: CrystalStructure (Molecular Structure Corporation & Rigaku, 2001); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: CRYSTALS (Watkin et al., 1996); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: CrystalStructure.
Henicosane-1,21-dithiol
top
Crystal data top
C21H44S2 | Z = 2 |
Mr = 360.70 | F(000) = 404.00 |
Triclinic, P1 | Dx = 1.044 Mg m−3 |
Hall symbol: -P 1 | Cu Kα radiation, λ = 1.5418 Å |
a = 4.7477 (5) Å | Cell parameters from 25 reflections |
b = 5.5680 (11) Å | θ = 10.0–18.8° |
c = 44.455 (5) Å | µ = 2.07 mm−1 |
α = 87.619 (13)° | T = 296 K |
β = 87.920 (9)° | Plate, colourless |
γ = 77.733 (11)° | 0.65 × 0.22 × 0.01 mm |
V = 1146.9 (3) Å3 | |
Data collection top
Rigaku AFC-5R diffractometer | Rint = 0.019 |
ω scans | θmax = 70.1° |
Absorption correction: ψ scan (North et al., 1968) | h = −5→5 |
Tmin = 0.640, Tmax = 0.977 | k = −1→6 |
5611 measured reflections | l = −54→54 |
4187 independent reflections | 3 standard reflections every 150 reflections |
1926 reflections with F2 > 2σ(F2) | intensity decay: 12.4% |
Refinement top
Refinement on F2 | w = (4Fo2)/[0.0001Fo2 + 3.3σ2(Fo) + 0.55] |
R[F2 > 2σ(F2)] = 0.056 | (Δ/σ)max < 0.001 |
wR(F2) = 0.123 | Δρmax = 0.60 e Å−3 |
S = 1.00 | Δρmin = −0.48 e Å−3 |
4187 reflections | Extinction correction: Larson (1970) |
257 parameters | Extinction coefficient: 23.4 (1) |
H-atom parameters constrained | |
Special details top
Refinement. Refinement using reflections with F2 > -10.0 σ(F2). The
weighted R-factor (wR) and goodness of fit (S) are based
on F2. R-factor (gt) are based on F. The threshold
expression of F2 > 2.0 σ(F2) is used only for calculating
R-factor (gt). |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 1.3600 (3) | −0.7742 (2) | 0.52661 (3) | 0.0952 (5) | |
S2 | 0.3417 (3) | 2.8117 (2) | 0.97663 (3) | 0.0993 (5) | |
C1 | 1.1122 (8) | −0.5364 (6) | 0.54564 (7) | 0.0751 (13) | |
C2 | 1.2436 (7) | −0.4111 (6) | 0.56909 (7) | 0.0570 (11) | |
C3 | 1.0232 (7) | −0.2212 (6) | 0.58586 (7) | 0.0565 (11) | |
C4 | 1.1522 (7) | −0.0899 (6) | 0.60936 (7) | 0.0528 (11) | |
C5 | 0.9320 (7) | 0.0949 (5) | 0.62651 (7) | 0.0527 (11) | |
C6 | 1.0587 (7) | 0.2278 (5) | 0.64994 (7) | 0.0511 (11) | |
C7 | 0.8380 (7) | 0.4129 (5) | 0.66726 (6) | 0.0500 (11) | |
C8 | 0.9642 (7) | 0.5470 (5) | 0.69058 (7) | 0.0498 (11) | |
C9 | 0.7431 (7) | 0.7302 (5) | 0.70789 (7) | 0.0505 (11) | |
C10 | 0.8693 (6) | 0.8660 (5) | 0.73108 (6) | 0.0496 (11) | |
C11 | 0.6480 (7) | 1.0485 (5) | 0.74846 (7) | 0.0502 (10) | |
C12 | 0.7735 (7) | 1.1849 (5) | 0.77161 (6) | 0.0504 (11) | |
C13 | 0.5528 (7) | 1.3678 (5) | 0.78911 (6) | 0.0507 (11) | |
C14 | 0.6801 (7) | 1.5034 (5) | 0.81227 (7) | 0.0503 (11) | |
C15 | 0.4586 (7) | 1.6854 (5) | 0.82977 (6) | 0.0512 (11) | |
C16 | 0.5859 (7) | 1.8220 (6) | 0.85282 (7) | 0.0514 (11) | |
C17 | 0.3640 (7) | 2.0029 (6) | 0.87054 (7) | 0.0534 (11) | |
C18 | 0.4937 (7) | 2.1386 (6) | 0.89347 (7) | 0.0555 (11) | |
C19 | 0.2728 (7) | 2.3168 (6) | 0.91171 (7) | 0.0587 (12) | |
C20 | 0.4060 (7) | 2.4573 (6) | 0.93380 (7) | 0.0594 (12) | |
C21 | 0.1831 (8) | 2.6256 (7) | 0.95274 (8) | 0.0789 (14) | |
H1 | 1.0304 | −0.4153 | 0.53095 | 0.089* | |
H2 | 0.9645 | −0.6064 | 0.55511 | 0.089* | |
H3 | 1.3832 | −0.3318 | 0.55954 | 0.068* | |
H4 | 1.3351 | −0.5326 | 0.58325 | 0.068* | |
H5 | 0.8855 | −0.3015 | 0.59561 | 0.067* | |
H6 | 0.9297 | −0.1016 | 0.57159 | 0.067* | |
H7 | 1.2865 | −0.0063 | 0.59956 | 0.063* | |
H8 | 1.2496 | −0.2098 | 0.62337 | 0.063* | |
H9 | 0.7982 | 0.0109 | 0.63636 | 0.063* | |
H10 | 0.8340 | 0.2141 | 0.61246 | 0.063* | |
H11 | 1.1572 | 0.1085 | 0.66395 | 0.061* | |
H12 | 1.1921 | 0.3121 | 0.64007 | 0.061* | |
H13 | 0.7388 | 0.5316 | 0.65324 | 0.060* | |
H14 | 0.7054 | 0.3284 | 0.67722 | 0.060* | |
H15 | 1.0951 | 0.6335 | 0.68067 | 0.060* | |
H16 | 1.0652 | 0.4282 | 0.70449 | 0.060* | |
H17 | 0.6139 | 0.6434 | 0.71808 | 0.061* | |
H18 | 0.6400 | 0.8476 | 0.69396 | 0.061* | |
H19 | 0.9996 | 0.9523 | 0.72098 | 0.060* | |
H20 | 0.9711 | 0.7482 | 0.74504 | 0.060* | |
H21 | 0.5460 | 1.1661 | 0.73449 | 0.060* | |
H22 | 0.5178 | 0.9621 | 0.75856 | 0.060* | |
H23 | 0.8755 | 1.0671 | 0.78556 | 0.061* | |
H24 | 0.9036 | 1.2712 | 0.76149 | 0.061* | |
H25 | 0.4225 | 1.2818 | 0.79923 | 0.061* | |
H26 | 0.4508 | 1.4860 | 0.77519 | 0.061* | |
H27 | 0.8099 | 1.5900 | 0.80215 | 0.061* | |
H28 | 0.7826 | 1.3854 | 0.82617 | 0.061* | |
H29 | 0.3555 | 1.8029 | 0.81585 | 0.062* | |
H30 | 0.3294 | 1.5986 | 0.83996 | 0.062* | |
H31 | 0.6903 | 1.7044 | 0.86664 | 0.062* | |
H32 | 0.7139 | 1.9098 | 0.84260 | 0.062* | |
H33 | 0.2594 | 2.1207 | 0.85676 | 0.064* | |
H34 | 0.2360 | 1.9154 | 0.88082 | 0.064* | |
H35 | 0.6191 | 2.2282 | 0.88312 | 0.067* | |
H36 | 0.6012 | 2.0204 | 0.90701 | 0.067* | |
H37 | 0.1609 | 2.4322 | 0.89818 | 0.071* | |
H38 | 0.1511 | 2.2268 | 0.92261 | 0.071* | |
H39 | 0.5247 | 2.3422 | 0.94681 | 0.072* | |
H40 | 0.5206 | 2.5536 | 0.92287 | 0.072* | |
H41 | 0.0802 | 2.5280 | 0.96508 | 0.095* | |
H42 | 0.0534 | 2.7309 | 0.93972 | 0.095* | |
H1s | 1.481 (8) | −0.702 (7) | 0.5148 (8) | 0.1113* | |
H2s | 0.330 (8) | 2.683 (6) | 0.9951 (8) | 0.1152* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.1200 (12) | 0.0823 (9) | 0.0780 (8) | −0.0045 (7) | 0.0135 (7) | −0.0411 (7) |
S2 | 0.1346 (12) | 0.0883 (9) | 0.0796 (8) | −0.0259 (8) | −0.0023 (8) | −0.0450 (7) |
C1 | 0.081 (3) | 0.075 (3) | 0.067 (2) | −0.005 (2) | −0.005 (2) | −0.034 (2) |
C2 | 0.064 (3) | 0.052 (2) | 0.053 (2) | −0.0070 (18) | −0.0002 (18) | −0.0179 (18) |
C3 | 0.056 (2) | 0.054 (2) | 0.057 (2) | −0.0087 (18) | −0.0025 (18) | −0.0229 (18) |
C4 | 0.054 (2) | 0.051 (2) | 0.054 (2) | −0.0070 (18) | −0.0017 (18) | −0.0204 (18) |
C5 | 0.052 (2) | 0.054 (2) | 0.052 (2) | −0.0065 (18) | −0.0017 (17) | −0.0189 (18) |
C6 | 0.053 (2) | 0.048 (2) | 0.052 (2) | −0.0064 (17) | −0.0024 (17) | −0.0191 (17) |
C7 | 0.051 (2) | 0.048 (2) | 0.051 (2) | −0.0071 (17) | −0.0011 (17) | −0.0190 (17) |
C8 | 0.052 (2) | 0.048 (2) | 0.050 (2) | −0.0073 (17) | −0.0004 (17) | −0.0197 (17) |
C9 | 0.050 (2) | 0.051 (2) | 0.0496 (19) | −0.0063 (17) | −0.0005 (17) | −0.0174 (17) |
C10 | 0.051 (2) | 0.049 (2) | 0.049 (2) | −0.0081 (18) | 0.0002 (17) | −0.0202 (18) |
C11 | 0.053 (2) | 0.049 (2) | 0.0482 (18) | −0.0080 (18) | −0.0014 (16) | −0.0182 (17) |
C12 | 0.052 (2) | 0.050 (2) | 0.049 (2) | −0.0074 (18) | −0.0005 (18) | −0.0193 (18) |
C13 | 0.052 (2) | 0.051 (2) | 0.049 (2) | −0.0064 (17) | −0.0017 (17) | −0.0191 (17) |
C14 | 0.051 (2) | 0.050 (2) | 0.050 (2) | −0.0088 (17) | −0.0025 (17) | −0.0209 (17) |
C15 | 0.053 (2) | 0.051 (2) | 0.0498 (19) | −0.0090 (17) | −0.0013 (17) | −0.0192 (17) |
C16 | 0.053 (2) | 0.052 (2) | 0.049 (2) | −0.0076 (18) | −0.0016 (17) | −0.0192 (17) |
C17 | 0.054 (2) | 0.056 (2) | 0.050 (2) | −0.0082 (18) | −0.0026 (17) | −0.0174 (18) |
C18 | 0.057 (3) | 0.058 (2) | 0.052 (2) | −0.0083 (18) | −0.0028 (18) | −0.0227 (18) |
C19 | 0.059 (2) | 0.061 (2) | 0.057 (2) | −0.0085 (19) | −0.0027 (18) | −0.0264 (19) |
C20 | 0.063 (3) | 0.062 (2) | 0.055 (2) | −0.0131 (19) | 0.0013 (19) | −0.0248 (19) |
C21 | 0.078 (3) | 0.087 (3) | 0.073 (3) | −0.013 (2) | 0.007 (2) | −0.042 (2) |
Geometric parameters (Å, º) top
S1—C1 | 1.792 (3) | C5—H10 | 0.95 |
S2—C21 | 1.803 (3) | C6—H11 | 0.95 |
C1—C2 | 1.502 (4) | C6—H12 | 0.95 |
C2—C3 | 1.519 (3) | C7—H13 | 0.95 |
C3—C4 | 1.517 (3) | C7—H14 | 0.95 |
C4—C5 | 1.511 (3) | C8—H15 | 0.95 |
C5—C6 | 1.514 (3) | C8—H16 | 0.95 |
C6—C7 | 1.517 (3) | C9—H17 | 0.95 |
C7—C8 | 1.513 (3) | C9—H18 | 0.95 |
C8—C9 | 1.512 (3) | C10—H19 | 0.95 |
C9—C10 | 1.515 (3) | C10—H20 | 0.95 |
C10—C11 | 1.512 (3) | C11—H21 | 0.95 |
C11—C12 | 1.515 (3) | C11—H22 | 0.95 |
C12—C13 | 1.514 (3) | C12—H23 | 0.95 |
C13—C14 | 1.516 (3) | C12—H24 | 0.95 |
C14—C15 | 1.514 (3) | C13—H25 | 0.95 |
C15—C16 | 1.516 (3) | C13—H26 | 0.95 |
C16—C17 | 1.517 (3) | C14—H27 | 0.95 |
C17—C18 | 1.515 (3) | C14—H28 | 0.95 |
C18—C19 | 1.518 (3) | C15—H29 | 0.95 |
C19—C20 | 1.515 (4) | C15—H30 | 0.95 |
C20—C21 | 1.512 (4) | C16—H31 | 0.95 |
S1—H1s | 0.91 (4) | C16—H32 | 0.95 |
S2—H2s | 1.08 (4) | C17—H33 | 0.95 |
C1—H1 | 0.95 | C17—H34 | 0.95 |
C1—H2 | 0.95 | C18—H35 | 0.95 |
C2—H3 | 0.95 | C18—H36 | 0.95 |
C2—H4 | 0.95 | C19—H37 | 0.95 |
C3—H5 | 0.95 | C19—H38 | 0.95 |
C3—H6 | 0.95 | C20—H39 | 0.95 |
C4—H7 | 0.95 | C20—H40 | 0.95 |
C4—H8 | 0.95 | C21—H41 | 0.95 |
C5—H9 | 0.95 | C21—H42 | 0.95 |
| | | |
S1···S1i | 3.5401 (18) | S2ii···S2iii | 3.5919 (19) |
| | | |
S1—C1—C2 | 114.8 (2) | C8—C9—H18 | 108.5 |
C1—C2—C3 | 113.0 (3) | C10—C9—H18 | 108.5 |
C2—C3—C4 | 113.8 (3) | H17—C9—H18 | 109.4 |
C3—C4—C5 | 113.8 (3) | C9—C10—H19 | 108.3 |
C4—C5—C6 | 114.2 (3) | C11—C10—H19 | 108.3 |
C5—C6—C7 | 114.3 (2) | C9—C10—H20 | 108.2 |
C6—C7—C8 | 114.5 (2) | C11—C10—H20 | 108.2 |
C7—C8—C9 | 114.2 (3) | H19—C10—H20 | 109.5 |
C8—C9—C10 | 114.3 (2) | C10—C11—H21 | 108.2 |
C9—C10—C11 | 114.2 (2) | C12—C11—H21 | 108.1 |
C10—C11—C12 | 114.4 (3) | C10—C11—H22 | 108.3 |
C11—C12—C13 | 114.6 (2) | C12—C11—H22 | 108.3 |
C12—C13—C14 | 114.3 (2) | H21—C11—H22 | 109.5 |
C13—C14—C15 | 114.1 (2) | C11—C12—H23 | 108.1 |
C14—C15—C16 | 114.1 (2) | C13—C12—H23 | 108.1 |
C15—C16—C17 | 114.2 (3) | C11—C12—H24 | 108.2 |
C16—C17—C18 | 113.7 (3) | C13—C12—H24 | 108.2 |
C17—C18—C19 | 114.1 (3) | H23—C12—H24 | 109.5 |
C18—C19—C20 | 113.5 (3) | C12—C13—H25 | 108.3 |
C19—C20—C21 | 112.8 (3) | C14—C13—H25 | 108.3 |
S2—C21—C20 | 112.5 (2) | C12—C13—H26 | 108.2 |
C1—S1—H1s | 108 (2) | C14—C13—H26 | 108.2 |
C21—S2—H2s | 89.6 (19) | H25—C13—H26 | 109.5 |
S1—C1—H1 | 107.9 | C13—C14—H27 | 108.4 |
C2—C1—H1 | 108.0 | C15—C14—H27 | 108.4 |
S1—C1—H2 | 108.3 | C13—C14—H28 | 108.2 |
C2—C1—H2 | 108.3 | C15—C14—H28 | 108.2 |
H1—C1—H2 | 109.5 | H27—C14—H28 | 109.5 |
C1—C2—H3 | 108.7 | C14—C15—H29 | 108.2 |
C3—C2—H3 | 108.7 | C16—C15—H29 | 108.3 |
C1—C2—H4 | 108.4 | C14—C15—H30 | 108.3 |
C3—C2—H4 | 108.5 | C16—C15—H30 | 108.4 |
H3—C2—H4 | 109.5 | H29—C15—H30 | 109.5 |
C2—C3—H5 | 108.5 | C15—C16—H31 | 108.2 |
C4—C3—H5 | 108.4 | C17—C16—H31 | 108.2 |
C2—C3—H6 | 108.3 | C15—C16—H32 | 108.4 |
C4—C3—H6 | 108.3 | C17—C16—H32 | 108.3 |
H5—C3—H6 | 109.5 | H31—C16—H32 | 109.5 |
C3—C4—H7 | 108.5 | C16—C17—H33 | 108.3 |
C5—C4—H7 | 108.4 | C18—C17—H33 | 108.3 |
C3—C4—H8 | 108.3 | C16—C17—H34 | 108.5 |
C5—C4—H8 | 108.3 | C18—C17—H34 | 108.5 |
H7—C4—H8 | 109.5 | H33—C17—H34 | 109.5 |
C4—C5—H9 | 108.3 | C17—C18—H35 | 108.4 |
C6—C5—H9 | 108.3 | C19—C18—H35 | 108.4 |
C4—C5—H10 | 108.2 | C17—C18—H36 | 108.2 |
C6—C5—H10 | 108.2 | C19—C18—H36 | 108.2 |
H9—C5—H10 | 109.5 | H35—C18—H36 | 109.5 |
C5—C6—H11 | 108.2 | C18—C19—H37 | 108.4 |
C7—C6—H11 | 108.2 | C20—C19—H37 | 108.3 |
C5—C6—H12 | 108.3 | C18—C19—H38 | 108.5 |
C7—C6—H12 | 108.3 | C20—C19—H38 | 108.6 |
H11—C6—H12 | 109.5 | H37—C19—H38 | 109.4 |
C6—C7—H13 | 108.2 | C19—C20—H39 | 108.5 |
C8—C7—H13 | 108.1 | C21—C20—H39 | 108.6 |
C6—C7—H14 | 108.3 | C19—C20—H40 | 108.8 |
C8—C7—H14 | 108.2 | C21—C20—H40 | 108.7 |
H13—C7—H14 | 109.5 | H39—C20—H40 | 109.5 |
C7—C8—H15 | 108.5 | S2—C21—H41 | 108.6 |
C9—C8—H15 | 107.9 | C20—C21—H41 | 108.7 |
C7—C8—H16 | 108.2 | S2—C21—H42 | 108.8 |
C9—C8—H16 | 108.5 | C20—C21—H42 | 108.7 |
H15—C8—H16 | 109.5 | H41—C21—H42 | 109.5 |
C8—C9—H17 | 108.0 | C1—S1—S1i | 160.19 (13) |
C10—C9—H17 | 108.0 | C21ii—S2ii—S2iii | 179.21 (14) |
| | | |
S1—C1—C2—C3 | −176.7 (2) | C11—C12—C13—C14 | 179.9 (3) |
C1—C2—C3—C4 | −179.2 (3) | C12—C13—C14—C15 | −179.8 (2) |
C2—C3—C4—C5 | −178.7 (3) | C13—C14—C15—C16 | −179.7 (2) |
C3—C4—C5—C6 | −179.7 (3) | C14—C15—C16—C17 | −179.5 (3) |
C4—C5—C6—C7 | −179.8 (3) | C15—C16—C17—C18 | −179.9 (3) |
C5—C6—C7—C8 | −179.7 (3) | C16—C17—C18—C19 | −179.0 (3) |
C6—C7—C8—C9 | −179.7 (3) | C17—C18—C19—C20 | −178.1 (3) |
C7—C8—C9—C10 | −179.5 (2) | C18—C19—C20—C21 | −177.5 (3) |
C8—C9—C10—C11 | −179.8 (3) | C19—C20—C21—S2 | −174.9 (2) |
C9—C10—C11—C12 | −179.9 (3) | C2—C1—S1—H1s | −69 (2) |
C10—C11—C12—C13 | −180.0 (2) | C20—C21—S2—H2s | −98 (2) |
Symmetry codes: (i) −x+3, −y−2, −z+1; (ii) x, y−2, z; (iii) −x+1, −y+4, −z+2. |