Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807052038/hb2603sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807052038/hb2603Isup2.hkl |
CCDC reference: 667444
The title compound was synthesized according to the procedure of Wu et al. (2002). Colourless blocks of (I) were obtained by slow evaporation of a dichloromethane solution at 283 K.
The H atoms were positioned geometrically, with C—H = 0.93 and 0.97 Å for aromatic and methylene H, respectively, and constrained to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).
Glycolurils, due to their special pre-formed skeletal structures, are widely used as platforms or building blocks to construct a series of compounds with more sophisticated structures (e. g. Reek et al., 2003). In recent years a series of receptors derived from glycoluril have been developed (Jansen et al., 2001).
We report here the structure of the title glycoluril derivative, (I) (Fig. 1), which is an important intermediate for the preparation of glycoluril receptors (Wu et al., 2002). The bond lengths and angles present in (I) show no unusual features and are similar to those found in other similar compounds (Fettinger et al., 2004; Cao et al., 2006).
The imidazole ring A (N1/N3/C9/C11/C16) and ring B (N2/N4/C10–11/C16) are close to flat, the maximum deviation from the mean plane being 0.085 (2) Å and 0.093 (2) Å for atom C9 or N2. The dihedral angle between them is 72.28 (7)°. The C3N2O oxadiazinane six-membered ring displays a chair conformation.
In the crystal, weak intermolecular C—H···O hydrogen bonds lead to the formation of a tape-like structure (Fig. 2).
For related structures, see: Fettinger et al. (2004); Cao et al. (2006). For background, see: Jansen et al. (2001); Wu et al. (2002); Reek et al. (2003).
Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXTL (Bruker, 2001).
C18H20N4O3 | F(000) = 720 |
Mr = 340.38 | Dx = 1.405 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 4769 reflections |
a = 11.8315 (12) Å | θ = 2.4–28.2° |
b = 11.3603 (11) Å | µ = 0.10 mm−1 |
c = 11.9716 (12) Å | T = 297 K |
β = 90.261 (2)° | Block, colorless |
V = 1609.1 (3) Å3 | 0.30 × 0.20 × 0.20 mm |
Z = 4 |
Bruker SMART 4K CCD diffractometer | 2964 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.020 |
Graphite monochromator | θmax = 27.0°, θmin = 2.4° |
ω scans | h = −13→15 |
9429 measured reflections | k = −10→14 |
3494 independent reflections | l = −14→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.129 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0769P)2 + 0.2493P] where P = (Fo2 + 2Fc2)/3 |
3494 reflections | (Δ/σ)max = 0.001 |
226 parameters | Δρmax = 0.22 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
C18H20N4O3 | V = 1609.1 (3) Å3 |
Mr = 340.38 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 11.8315 (12) Å | µ = 0.10 mm−1 |
b = 11.3603 (11) Å | T = 297 K |
c = 11.9716 (12) Å | 0.30 × 0.20 × 0.20 mm |
β = 90.261 (2)° |
Bruker SMART 4K CCD diffractometer | 2964 reflections with I > 2σ(I) |
9429 measured reflections | Rint = 0.020 |
3494 independent reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.129 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.22 e Å−3 |
3494 reflections | Δρmin = −0.24 e Å−3 |
226 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N2 | 1.00013 (9) | 0.16297 (9) | 0.17388 (9) | 0.0371 (3) | |
N3 | 0.87562 (9) | 0.04324 (10) | 0.39525 (9) | 0.0393 (3) | |
O1 | 0.93433 (10) | 0.18108 (9) | 0.52572 (8) | 0.0525 (3) | |
C11 | 1.02131 (10) | 0.07801 (11) | 0.26298 (10) | 0.0329 (3) | |
C9 | 0.94842 (11) | 0.12802 (11) | 0.43866 (11) | 0.0384 (3) | |
O2 | 0.84406 (10) | 0.26030 (10) | 0.10290 (9) | 0.0566 (3) | |
N1 | 1.03911 (9) | 0.13619 (10) | 0.36993 (9) | 0.0380 (3) | |
O3 | 0.70042 (9) | 0.13063 (10) | 0.34834 (11) | 0.0599 (3) | |
N4 | 0.82993 (9) | 0.08765 (10) | 0.20448 (10) | 0.0409 (3) | |
C16 | 0.90377 (10) | 0.01906 (11) | 0.27860 (10) | 0.0341 (3) | |
C10 | 0.88658 (12) | 0.18055 (12) | 0.15638 (11) | 0.0399 (3) | |
C12 | 1.11293 (11) | −0.01106 (13) | 0.23557 (12) | 0.0435 (3) | |
H12A | 1.1827 | 0.0304 | 0.2195 | 0.052* | |
H12B | 1.1261 | −0.0607 | 0.3002 | 0.052* | |
C15 | 0.90251 (12) | −0.11112 (11) | 0.24948 (12) | 0.0395 (3) | |
H15A | 0.8251 | −0.1391 | 0.2461 | 0.047* | |
H15B | 0.9420 | −0.1553 | 0.3069 | 0.047* | |
C6 | 1.08589 (11) | 0.35691 (12) | 0.22752 (12) | 0.0419 (3) | |
C13 | 1.08184 (14) | −0.08793 (14) | 0.13630 (14) | 0.0526 (4) | |
H13A | 1.1315 | −0.1559 | 0.1353 | 0.063* | |
H13B | 1.0947 | −0.0438 | 0.0682 | 0.063* | |
C7 | 1.08185 (13) | 0.25468 (13) | 0.14646 (11) | 0.0447 (3) | |
H7A | 1.0642 | 0.2850 | 0.0727 | 0.054* | |
H7B | 1.1564 | 0.2194 | 0.1431 | 0.054* | |
C8 | 1.13119 (12) | 0.21882 (13) | 0.38893 (12) | 0.0460 (3) | |
H8A | 1.1995 | 0.1872 | 0.3559 | 0.055* | |
H8B | 1.1442 | 0.2258 | 0.4687 | 0.055* | |
C17 | 0.75673 (13) | 0.04987 (15) | 0.42045 (14) | 0.0538 (4) | |
H17A | 0.7231 | −0.0275 | 0.4123 | 0.065* | |
H17B | 0.7471 | 0.0747 | 0.4974 | 0.065* | |
C5 | 1.06832 (13) | 0.47048 (14) | 0.18786 (16) | 0.0544 (4) | |
H5 | 1.0519 | 0.4822 | 0.1126 | 0.065* | |
C1 | 1.10963 (11) | 0.34032 (13) | 0.34123 (12) | 0.0429 (3) | |
C18 | 0.71283 (12) | 0.09427 (15) | 0.23565 (15) | 0.0544 (4) | |
H18A | 0.6741 | 0.1496 | 0.1870 | 0.065* | |
H18B | 0.6780 | 0.0177 | 0.2258 | 0.065* | |
C14 | 0.95944 (13) | −0.13044 (13) | 0.13732 (12) | 0.0468 (3) | |
H14A | 0.9172 | −0.0890 | 0.0799 | 0.056* | |
H14B | 0.9576 | −0.2137 | 0.1194 | 0.056* | |
C3 | 1.09754 (15) | 0.55057 (15) | 0.37046 (19) | 0.0662 (5) | |
H3 | 1.1015 | 0.6148 | 0.4184 | 0.079* | |
C4 | 1.07500 (14) | 0.56673 (15) | 0.2592 (2) | 0.0672 (5) | |
H4 | 1.0641 | 0.6423 | 0.2313 | 0.081* | |
C2 | 1.11438 (14) | 0.43785 (15) | 0.41086 (16) | 0.0569 (4) | |
H2 | 1.1292 | 0.4272 | 0.4865 | 0.068* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N2 | 0.0430 (6) | 0.0330 (5) | 0.0352 (5) | −0.0025 (5) | −0.0016 (4) | 0.0022 (4) |
N3 | 0.0402 (6) | 0.0360 (6) | 0.0417 (6) | −0.0005 (5) | 0.0086 (4) | −0.0033 (5) |
O1 | 0.0746 (7) | 0.0445 (6) | 0.0384 (5) | 0.0023 (5) | 0.0057 (5) | −0.0076 (4) |
C11 | 0.0354 (6) | 0.0303 (6) | 0.0331 (6) | −0.0004 (5) | −0.0008 (5) | 0.0000 (5) |
C9 | 0.0487 (8) | 0.0312 (6) | 0.0354 (6) | 0.0035 (5) | 0.0003 (5) | 0.0010 (5) |
O2 | 0.0676 (7) | 0.0432 (6) | 0.0590 (7) | 0.0108 (5) | −0.0153 (5) | 0.0088 (5) |
N1 | 0.0428 (6) | 0.0380 (6) | 0.0332 (5) | −0.0068 (5) | −0.0018 (4) | −0.0007 (4) |
O3 | 0.0417 (6) | 0.0529 (7) | 0.0850 (8) | 0.0110 (5) | 0.0086 (5) | −0.0094 (6) |
N4 | 0.0357 (6) | 0.0355 (6) | 0.0514 (7) | 0.0032 (4) | −0.0069 (5) | 0.0001 (5) |
C16 | 0.0334 (6) | 0.0308 (6) | 0.0380 (6) | 0.0016 (5) | 0.0003 (5) | −0.0007 (5) |
C10 | 0.0479 (7) | 0.0324 (7) | 0.0393 (7) | 0.0046 (5) | −0.0071 (5) | −0.0042 (5) |
C12 | 0.0364 (7) | 0.0408 (7) | 0.0533 (8) | 0.0045 (6) | 0.0057 (6) | 0.0031 (6) |
C15 | 0.0419 (7) | 0.0294 (6) | 0.0471 (7) | −0.0013 (5) | 0.0005 (5) | −0.0016 (5) |
C6 | 0.0343 (6) | 0.0362 (7) | 0.0553 (8) | −0.0047 (5) | 0.0063 (6) | 0.0020 (6) |
C13 | 0.0620 (9) | 0.0405 (8) | 0.0553 (9) | 0.0048 (7) | 0.0191 (7) | −0.0053 (7) |
C7 | 0.0531 (8) | 0.0430 (8) | 0.0381 (7) | −0.0070 (6) | 0.0059 (6) | 0.0051 (6) |
C8 | 0.0472 (8) | 0.0471 (8) | 0.0437 (7) | −0.0101 (6) | −0.0076 (6) | −0.0024 (6) |
C17 | 0.0461 (8) | 0.0502 (9) | 0.0652 (10) | −0.0006 (7) | 0.0181 (7) | −0.0042 (7) |
C5 | 0.0410 (8) | 0.0422 (8) | 0.0801 (11) | −0.0021 (6) | 0.0037 (7) | 0.0106 (8) |
C1 | 0.0367 (7) | 0.0406 (7) | 0.0514 (8) | −0.0081 (6) | 0.0076 (6) | −0.0064 (6) |
C18 | 0.0357 (7) | 0.0482 (9) | 0.0791 (11) | 0.0037 (6) | −0.0071 (7) | −0.0054 (8) |
C14 | 0.0612 (9) | 0.0366 (7) | 0.0427 (7) | 0.0046 (6) | −0.0013 (6) | −0.0060 (6) |
C3 | 0.0530 (9) | 0.0454 (9) | 0.1005 (15) | −0.0072 (7) | 0.0239 (9) | −0.0274 (9) |
C4 | 0.0434 (9) | 0.0354 (8) | 0.1228 (18) | 0.0020 (6) | 0.0160 (9) | 0.0013 (9) |
C2 | 0.0521 (9) | 0.0534 (9) | 0.0653 (10) | −0.0136 (7) | 0.0150 (7) | −0.0190 (8) |
N2—C10 | 1.3734 (17) | C6—C5 | 1.390 (2) |
N2—C11 | 1.4593 (16) | C6—C1 | 1.401 (2) |
N2—C7 | 1.4598 (17) | C6—C7 | 1.514 (2) |
N3—C9 | 1.3912 (17) | C13—C14 | 1.527 (2) |
N3—C17 | 1.4419 (18) | C13—H13A | 0.9700 |
N3—C16 | 1.4631 (17) | C13—H13B | 0.9700 |
O1—C9 | 1.2161 (16) | C7—H7A | 0.9700 |
C11—N1 | 1.4554 (16) | C7—H7B | 0.9700 |
C11—C12 | 1.5198 (18) | C8—C1 | 1.515 (2) |
C11—C16 | 1.5556 (17) | C8—H8A | 0.9700 |
C9—N1 | 1.3582 (17) | C8—H8B | 0.9700 |
O2—C10 | 1.2169 (16) | C17—H17A | 0.9700 |
N1—C8 | 1.4552 (17) | C17—H17B | 0.9700 |
O3—C18 | 1.419 (2) | C5—C4 | 1.390 (3) |
O3—C17 | 1.423 (2) | C5—H5 | 0.9300 |
N4—C10 | 1.3777 (19) | C1—C2 | 1.387 (2) |
N4—C18 | 1.4384 (18) | C18—H18A | 0.9700 |
N4—C16 | 1.4665 (16) | C18—H18B | 0.9700 |
C16—C15 | 1.5195 (18) | C14—H14A | 0.9700 |
C12—C13 | 1.519 (2) | C14—H14B | 0.9700 |
C12—H12A | 0.9700 | C3—C4 | 1.369 (3) |
C12—H12B | 0.9700 | C3—C2 | 1.383 (3) |
C15—C14 | 1.521 (2) | C3—H3 | 0.9300 |
C15—H15A | 0.9700 | C4—H4 | 0.9300 |
C15—H15B | 0.9700 | C2—H2 | 0.9300 |
C10—N2—C11 | 111.86 (10) | C12—C13—H13B | 108.8 |
C10—N2—C7 | 120.69 (11) | C14—C13—H13B | 108.8 |
C11—N2—C7 | 121.65 (11) | H13A—C13—H13B | 107.7 |
C9—N3—C17 | 119.25 (11) | N2—C7—C6 | 114.99 (11) |
C9—N3—C16 | 110.08 (10) | N2—C7—H7A | 108.5 |
C17—N3—C16 | 115.85 (11) | C6—C7—H7A | 108.5 |
N1—C11—N2 | 111.49 (10) | N2—C7—H7B | 108.5 |
N1—C11—C12 | 113.07 (10) | C6—C7—H7B | 108.5 |
N2—C11—C12 | 113.75 (10) | H7A—C7—H7B | 107.5 |
N1—C11—C16 | 102.45 (9) | N1—C8—C1 | 113.84 (11) |
N2—C11—C16 | 102.83 (9) | N1—C8—H8A | 108.8 |
C12—C11—C16 | 112.23 (10) | C1—C8—H8A | 108.8 |
O1—C9—N1 | 126.66 (13) | N1—C8—H8B | 108.8 |
O1—C9—N3 | 125.18 (13) | C1—C8—H8B | 108.8 |
N1—C9—N3 | 108.09 (11) | H8A—C8—H8B | 107.7 |
C9—N1—C8 | 122.84 (11) | O3—C17—N3 | 111.18 (12) |
C9—N1—C11 | 112.98 (10) | O3—C17—H17A | 109.4 |
C8—N1—C11 | 122.39 (11) | N3—C17—H17A | 109.4 |
C18—O3—C17 | 109.80 (11) | O3—C17—H17B | 109.4 |
C10—N4—C18 | 122.64 (12) | N3—C17—H17B | 109.4 |
C10—N4—C16 | 111.74 (10) | H17A—C17—H17B | 108.0 |
C18—N4—C16 | 116.27 (12) | C4—C5—C6 | 120.82 (18) |
N3—C16—N4 | 109.89 (10) | C4—C5—H5 | 119.6 |
N3—C16—C15 | 113.56 (11) | C6—C5—H5 | 119.6 |
N4—C16—C15 | 111.91 (11) | C2—C1—C6 | 118.92 (15) |
N3—C16—C11 | 103.97 (10) | C2—C1—C8 | 119.66 (14) |
N4—C16—C11 | 103.23 (10) | C6—C1—C8 | 121.43 (12) |
C15—C16—C11 | 113.53 (10) | O3—C18—N4 | 111.45 (12) |
O2—C10—N2 | 126.18 (14) | O3—C18—H18A | 109.3 |
O2—C10—N4 | 126.12 (13) | N4—C18—H18A | 109.3 |
N2—C10—N4 | 107.59 (11) | O3—C18—H18B | 109.3 |
C13—C12—C11 | 112.42 (12) | N4—C18—H18B | 109.3 |
C13—C12—H12A | 109.1 | H18A—C18—H18B | 108.0 |
C11—C12—H12A | 109.1 | C15—C14—C13 | 112.66 (12) |
C13—C12—H12B | 109.1 | C15—C14—H14A | 109.1 |
C11—C12—H12B | 109.1 | C13—C14—H14A | 109.1 |
H12A—C12—H12B | 107.9 | C15—C14—H14B | 109.1 |
C16—C15—C14 | 109.82 (11) | C13—C14—H14B | 109.1 |
C16—C15—H15A | 109.7 | H14A—C14—H14B | 107.8 |
C14—C15—H15A | 109.7 | C4—C3—C2 | 119.43 (16) |
C16—C15—H15B | 109.7 | C4—C3—H3 | 120.3 |
C14—C15—H15B | 109.7 | C2—C3—H3 | 120.3 |
H15A—C15—H15B | 108.2 | C3—C4—C5 | 120.17 (17) |
C5—C6—C1 | 119.05 (14) | C3—C4—H4 | 119.9 |
C5—C6—C7 | 119.26 (14) | C5—C4—H4 | 119.9 |
C1—C6—C7 | 121.67 (13) | C3—C2—C1 | 121.59 (18) |
C12—C13—C14 | 113.71 (12) | C3—C2—H2 | 119.2 |
C12—C13—H13A | 108.8 | C1—C2—H2 | 119.2 |
C14—C13—H13A | 108.8 | ||
C10—N2—C11—N1 | −94.60 (12) | C7—N2—C10—O2 | 12.3 (2) |
C7—N2—C11—N1 | 58.67 (15) | C11—N2—C10—N4 | −17.78 (14) |
C10—N2—C11—C12 | 136.10 (12) | C7—N2—C10—N4 | −171.35 (11) |
C7—N2—C11—C12 | −70.62 (15) | C18—N4—C10—O2 | −24.9 (2) |
C10—N2—C11—C16 | 14.50 (13) | C16—N4—C10—O2 | −170.16 (13) |
C7—N2—C11—C16 | 167.77 (11) | C18—N4—C10—N2 | 158.67 (12) |
C17—N3—C9—O1 | 28.9 (2) | C16—N4—C10—N2 | 13.46 (15) |
C16—N3—C9—O1 | 166.34 (13) | N1—C11—C12—C13 | 168.61 (11) |
C17—N3—C9—N1 | −154.01 (12) | N2—C11—C12—C13 | −62.90 (15) |
C16—N3—C9—N1 | −16.56 (14) | C16—C11—C12—C13 | 53.32 (15) |
O1—C9—N1—C8 | −4.4 (2) | N3—C16—C15—C14 | −166.31 (11) |
N3—C9—N1—C8 | 178.55 (11) | N4—C16—C15—C14 | 68.56 (14) |
O1—C9—N1—C11 | −169.48 (13) | C11—C16—C15—C14 | −47.82 (15) |
N3—C9—N1—C11 | 13.47 (15) | C11—C12—C13—C14 | −42.71 (18) |
N2—C11—N1—C9 | 104.29 (12) | C10—N2—C7—C6 | 75.03 (16) |
C12—C11—N1—C9 | −126.05 (12) | C11—N2—C7—C6 | −75.93 (16) |
C16—C11—N1—C9 | −5.05 (13) | C5—C6—C7—N2 | −123.34 (14) |
N2—C11—N1—C8 | −60.86 (15) | C1—C6—C7—N2 | 58.23 (18) |
C12—C11—N1—C8 | 68.80 (16) | C9—N1—C8—C1 | −85.48 (16) |
C16—C11—N1—C8 | −170.20 (12) | C11—N1—C8—C1 | 78.21 (16) |
C9—N3—C16—N4 | −96.99 (12) | C18—O3—C17—N3 | 59.77 (16) |
C17—N3—C16—N4 | 42.05 (15) | C9—N3—C17—O3 | 82.31 (16) |
C9—N3—C16—C15 | 136.81 (11) | C16—N3—C17—O3 | −52.80 (16) |
C17—N3—C16—C15 | −84.16 (14) | C1—C6—C5—C4 | 0.5 (2) |
C9—N3—C16—C11 | 12.94 (13) | C7—C6—C5—C4 | −177.93 (14) |
C17—N3—C16—C11 | 151.98 (11) | C5—C6—C1—C2 | 0.3 (2) |
C10—N4—C16—N3 | 106.11 (12) | C7—C6—C1—C2 | 178.71 (13) |
C18—N4—C16—N3 | −41.49 (15) | C5—C6—C1—C8 | −179.11 (13) |
C10—N4—C16—C15 | −126.76 (12) | C7—C6—C1—C8 | −0.7 (2) |
C18—N4—C16—C15 | 85.64 (14) | N1—C8—C1—C2 | 123.37 (14) |
C10—N4—C16—C11 | −4.30 (14) | N1—C8—C1—C6 | −57.23 (18) |
C18—N4—C16—C11 | −151.90 (11) | C17—O3—C18—N4 | −59.14 (16) |
N1—C11—C16—N3 | −4.75 (12) | C10—N4—C18—O3 | −92.18 (16) |
N2—C11—C16—N3 | −120.54 (10) | C16—N4—C18—O3 | 51.59 (17) |
C12—C11—C16—N3 | 116.83 (11) | C16—C15—C14—C13 | 59.16 (16) |
N1—C11—C16—N4 | 110.00 (10) | C12—C13—C14—C15 | −13.33 (18) |
N2—C11—C16—N4 | −5.79 (12) | C2—C3—C4—C5 | 0.5 (3) |
C12—C11—C16—N4 | −128.42 (11) | C6—C5—C4—C3 | −0.9 (2) |
N1—C11—C16—C15 | −128.64 (11) | C4—C3—C2—C1 | 0.4 (3) |
N2—C11—C16—C15 | 115.58 (11) | C6—C1—C2—C3 | −0.7 (2) |
C12—C11—C16—C15 | −7.06 (15) | C8—C1—C2—C3 | 178.67 (14) |
C11—N2—C10—O2 | 165.84 (13) |
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15B···O1i | 0.97 | 2.49 | 3.3991 (18) | 156 |
C17—H17A···O2ii | 0.97 | 2.54 | 3.510 (2) | 174 |
C12—H12B···O1i | 0.97 | 2.60 | 3.4963 (18) | 155 |
C3—H3···O1iii | 0.93 | 2.45 | 3.3144 (19) | 155 |
Symmetry codes: (i) −x+2, −y, −z+1; (ii) −x+3/2, y−1/2, −z+1/2; (iii) −x+2, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C18H20N4O3 |
Mr | 340.38 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 297 |
a, b, c (Å) | 11.8315 (12), 11.3603 (11), 11.9716 (12) |
β (°) | 90.261 (2) |
V (Å3) | 1609.1 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.30 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART 4K CCD |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9429, 3494, 2964 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.129, 1.05 |
No. of reflections | 3494 |
No. of parameters | 226 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.22, −0.24 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), PLATON (Spek, 2003), SHELXTL (Bruker, 2001).
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15B···O1i | 0.97 | 2.49 | 3.3991 (18) | 156 |
C17—H17A···O2ii | 0.97 | 2.54 | 3.510 (2) | 174 |
C12—H12B···O1i | 0.97 | 2.60 | 3.4963 (18) | 155 |
C3—H3···O1iii | 0.93 | 2.45 | 3.3144 (19) | 155 |
Symmetry codes: (i) −x+2, −y, −z+1; (ii) −x+3/2, y−1/2, −z+1/2; (iii) −x+2, −y+1, −z+1. |
Glycolurils, due to their special pre-formed skeletal structures, are widely used as platforms or building blocks to construct a series of compounds with more sophisticated structures (e. g. Reek et al., 2003). In recent years a series of receptors derived from glycoluril have been developed (Jansen et al., 2001).
We report here the structure of the title glycoluril derivative, (I) (Fig. 1), which is an important intermediate for the preparation of glycoluril receptors (Wu et al., 2002). The bond lengths and angles present in (I) show no unusual features and are similar to those found in other similar compounds (Fettinger et al., 2004; Cao et al., 2006).
The imidazole ring A (N1/N3/C9/C11/C16) and ring B (N2/N4/C10–11/C16) are close to flat, the maximum deviation from the mean plane being 0.085 (2) Å and 0.093 (2) Å for atom C9 or N2. The dihedral angle between them is 72.28 (7)°. The C3N2O oxadiazinane six-membered ring displays a chair conformation.
In the crystal, weak intermolecular C—H···O hydrogen bonds lead to the formation of a tape-like structure (Fig. 2).