Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270107038632/gd3127sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270107038632/gd3127Isup2.hkl | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270107038632/gd3127IIsup3.hkl |
CCDC references: 665496; 665497
Rather than the published method of San Feliciano et al. (1989), a modification of the synthetic procedure of [Please give reference for unmodified procedure] was used to prepare (I) and (II).
For compound, (I), methyl β-aminocrotonate (23 g) and excess glyoxal (40% in water, 25 ml) were mixed at room temperature in water (80 ml). The mixture was then allowed to stand overnight to give red crystals of (I) (yield 26%). The product was recrystallized from ethyl acetate. 1H NMR (CDCl3, δ, p.p.m.): 7.76 (s, 1H, NH), 3.71 (s, 3H, COOCH3), 3.28 (q, J = 2.4 Hz, 2H, CH2), 2.35 (t, J = 2.4 Hz, 3H, CH3).
For the synthesis of (II), excess aqueous ammonia (17%, 0.22 mol) was introduced into a stirred solution of 2,4-pentanedione (20 g, 0.2 mol) in water (80 ml) at room temperature. After 2 h, excess glyoxal (40% in water, 25 ml) was added with stirring and the mixture was then allowed to stand overnight to give red crystals of (II) (yield 23%). The product was recrystallized from ethyl acetate. 1H NMR (CDCl3, δ, p.p.m.): 7.28 (s, 1H, NH), 3.34 (d, J = 2 Hz, 2H, CH2), 2.38 (t, J = 2 Hz, 3H, CH3), 2.20 (s, 3H, COCH3).
H atoms were placed in idealized positions and allowed to ride on their respective parent atoms, with C—H = 0.98 Å and N—H = 0.86 Å, and with Uiso(H) = kUeq(carrier atom), where k = 1.2 for C—H and N—H, and 1.5 for the methyl groups.
For both compounds, data collection: SMART (Bruker, 1997); cell refinement: SMART; data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997a); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997a); molecular graphics: SHELXTL (Sheldrick, 1997b); software used to prepare material for publication: SHELXTL.
C7H9NO3 | Z = 4 |
Mr = 155.15 | F(000) = 328 |
Monoclinic, P21/c | Dx = 1.398 Mg m−3 |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 12.377 (3) Å | µ = 0.11 mm−1 |
b = 7.562 (2) Å | T = 291 K |
c = 7.880 (2) Å | Block, red |
β = 91.509 (3)° | 0.36 × 0.32 × 0.23 mm |
V = 737.4 (3) Å3 |
Bruker SMART CCD area-detector diffractometer | 1371 independent reflections |
Radiation source: fine-focus sealed tube | 1095 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.045 |
ϕ and ω scans | θmax = 25.5°, θmin = 3.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −14→14 |
Tmin = 0.958, Tmax = 0.975 | k = −9→9 |
5325 measured reflections | l = −9→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.142 | H-atom parameters constrained |
S = 1.31 | w = 1/[σ2(Fo2) + (0.0731P)2] where P = (Fo2 + 2Fc2)/3 |
1371 reflections | (Δ/σ)max < 0.001 |
102 parameters | Δρmax = 0.24 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
C7H9NO3 | V = 737.4 (3) Å3 |
Mr = 155.15 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.377 (3) Å | µ = 0.11 mm−1 |
b = 7.562 (2) Å | T = 291 K |
c = 7.880 (2) Å | 0.36 × 0.32 × 0.23 mm |
β = 91.509 (3)° |
Bruker SMART CCD area-detector diffractometer | 1371 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1095 reflections with I > 2σ(I) |
Tmin = 0.958, Tmax = 0.975 | Rint = 0.045 |
5325 measured reflections |
R[F2 > 2σ(F2)] = 0.048 | 0 restraints |
wR(F2) = 0.142 | H-atom parameters constrained |
S = 1.31 | Δρmax = 0.24 e Å−3 |
1371 reflections | Δρmin = −0.24 e Å−3 |
102 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 1.02268 (11) | 0.25843 (17) | 1.23592 (18) | 0.0546 (4) | |
O2 | 0.66840 (11) | 0.49951 (17) | 0.90559 (17) | 0.0565 (5) | |
O3 | 0.60684 (10) | 0.22581 (17) | 0.85190 (16) | 0.0476 (4) | |
N1 | 0.89483 (11) | 0.07468 (18) | 1.11840 (17) | 0.0398 (4) | |
H1 | 0.9244 | −0.0239 | 1.1481 | 0.048* | |
C2 | 0.79683 (14) | 0.0866 (2) | 1.0285 (2) | 0.0357 (4) | |
C3 | 0.77377 (13) | 0.2592 (2) | 0.99831 (19) | 0.0352 (5) | |
C4 | 0.86311 (14) | 0.3709 (2) | 1.0741 (2) | 0.0381 (4) | |
H4A | 0.8359 | 0.4515 | 1.1587 | 0.046* | |
H4B | 0.8989 | 0.4385 | 0.9873 | 0.046* | |
C5 | 0.93881 (14) | 0.2356 (2) | 1.1542 (2) | 0.0393 (5) | |
C6 | 0.68033 (14) | 0.3413 (2) | 0.9159 (2) | 0.0380 (4) | |
C7 | 0.51227 (16) | 0.3048 (3) | 0.7723 (3) | 0.0545 (6) | |
H7A | 0.4730 | 0.3694 | 0.8556 | 0.082* | |
H7B | 0.4669 | 0.2137 | 0.7243 | 0.082* | |
H7C | 0.5339 | 0.3839 | 0.6842 | 0.082* | |
C1 | 0.73973 (16) | −0.0812 (2) | 0.9848 (2) | 0.0484 (5) | |
H1A | 0.6764 | −0.0556 | 0.9163 | 0.073* | |
H1B | 0.7190 | −0.1396 | 1.0871 | 0.073* | |
H1C | 0.7870 | −0.1568 | 0.9228 | 0.073* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0485 (9) | 0.0394 (8) | 0.0748 (9) | −0.0023 (6) | −0.0211 (7) | −0.0054 (6) |
O2 | 0.0561 (9) | 0.0278 (8) | 0.0848 (10) | 0.0039 (6) | −0.0157 (7) | 0.0004 (6) |
O3 | 0.0393 (8) | 0.0343 (8) | 0.0685 (9) | −0.0011 (5) | −0.0118 (6) | 0.0007 (5) |
N1 | 0.0410 (9) | 0.0248 (8) | 0.0531 (9) | 0.0018 (6) | −0.0069 (7) | −0.0010 (5) |
C2 | 0.0335 (9) | 0.0317 (10) | 0.0419 (9) | −0.0007 (6) | 0.0004 (7) | −0.0013 (6) |
C3 | 0.0359 (10) | 0.0280 (9) | 0.0416 (9) | −0.0016 (7) | 0.0001 (7) | −0.0020 (6) |
C4 | 0.0418 (10) | 0.0282 (9) | 0.0441 (9) | −0.0019 (7) | −0.0021 (8) | −0.0009 (6) |
C5 | 0.0388 (10) | 0.0315 (10) | 0.0473 (9) | −0.0008 (7) | −0.0028 (8) | −0.0033 (7) |
C6 | 0.0386 (10) | 0.0304 (10) | 0.0449 (9) | −0.0007 (7) | −0.0003 (7) | −0.0005 (6) |
C7 | 0.0426 (11) | 0.0469 (11) | 0.0734 (13) | 0.0027 (9) | −0.0143 (9) | 0.0009 (9) |
C1 | 0.0476 (12) | 0.0302 (11) | 0.0670 (12) | −0.0065 (8) | −0.0041 (9) | −0.0031 (8) |
O1—C5 | 1.219 (2) | C3—C4 | 1.503 (2) |
O2—C6 | 1.208 (2) | C4—C5 | 1.514 (2) |
O3—C6 | 1.349 (2) | C4—H4A | 0.9700 |
O3—C7 | 1.443 (2) | C4—H4B | 0.9700 |
N1—C5 | 1.359 (2) | C7—H7A | 0.9600 |
N1—C2 | 1.391 (2) | C7—H7B | 0.9600 |
N1—H1 | 0.8600 | C7—H7C | 0.9600 |
C2—C3 | 1.356 (2) | C1—H1A | 0.9600 |
C2—C1 | 1.489 (2) | C1—H1B | 0.9600 |
C3—C6 | 1.451 (2) | C1—H1C | 0.9600 |
C6—O3—C7 | 115.19 (14) | O1—C5—C4 | 129.27 (15) |
C5—N1—C2 | 112.74 (14) | N1—C5—C4 | 106.16 (14) |
C5—N1—H1 | 123.6 | O2—C6—O3 | 122.40 (16) |
C2—N1—H1 | 123.6 | O2—C6—C3 | 123.26 (16) |
C3—C2—N1 | 109.18 (15) | O3—C6—C3 | 114.34 (15) |
C3—C2—C1 | 133.14 (17) | O3—C7—H7A | 109.5 |
N1—C2—C1 | 117.68 (15) | O3—C7—H7B | 109.5 |
C2—C3—C6 | 130.69 (16) | H7A—C7—H7B | 109.5 |
C2—C3—C4 | 108.78 (15) | O3—C7—H7C | 109.5 |
C6—C3—C4 | 120.47 (15) | H7A—C7—H7C | 109.5 |
C3—C4—C5 | 103.09 (14) | H7B—C7—H7C | 109.5 |
C3—C4—H4A | 111.1 | C2—C1—H1A | 109.5 |
C5—C4—H4A | 111.1 | C2—C1—H1B | 109.5 |
C3—C4—H4B | 111.1 | H1A—C1—H1B | 109.5 |
C5—C4—H4B | 111.1 | C2—C1—H1C | 109.5 |
H4A—C4—H4B | 109.1 | H1A—C1—H1C | 109.5 |
O1—C5—N1 | 124.57 (16) | H1B—C1—H1C | 109.5 |
C5—N1—C2—C3 | 1.4 (2) | C2—N1—C5—C4 | −1.96 (19) |
C5—N1—C2—C1 | −178.83 (15) | C3—C4—C5—O1 | −177.99 (18) |
N1—C2—C3—C6 | −177.45 (15) | C3—C4—C5—N1 | 1.74 (16) |
C1—C2—C3—C6 | 2.8 (3) | C7—O3—C6—O2 | −0.9 (2) |
N1—C2—C3—C4 | −0.10 (19) | C7—O3—C6—C3 | 178.84 (14) |
C1—C2—C3—C4 | −179.87 (18) | C2—C3—C6—O2 | 176.11 (17) |
C2—C3—C4—C5 | −1.00 (16) | C4—C3—C6—O2 | −1.0 (2) |
C6—C3—C4—C5 | 176.66 (14) | C2—C3—C6—O3 | −3.6 (2) |
C2—N1—C5—O1 | 177.78 (16) | C4—C3—C6—O3 | 179.34 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.86 | 1.99 | 2.832 (2) | 168 |
Symmetry code: (i) −x+2, y−1/2, −z+5/2. |
C7H9NO2 | F(000) = 296 |
Mr = 139.15 | Dx = 1.333 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2403 reflections |
a = 12.1211 (18) Å | θ = 3.2–27.9° |
b = 7.5078 (11) Å | µ = 0.10 mm−1 |
c = 7.9542 (12) Å | T = 291 K |
β = 106.740 (2)° | Block, red |
V = 693.18 (18) Å3 | 0.47 × 0.29 × 0.24 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 1289 independent reflections |
Radiation source: fine-focus sealed tube | 1150 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.013 |
ϕ and ω scans | θmax = 25.5°, θmin = 3.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −14→14 |
Tmin = 0.954, Tmax = 0.977 | k = −9→9 |
4420 measured reflections | l = −9→9 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.039 | H-atom parameters constrained |
wR(F2) = 0.124 | w = 1/[σ2(Fo2) + (0.0671P)2 + 0.1884P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max = 0.002 |
1289 reflections | Δρmax = 0.23 e Å−3 |
94 parameters | Δρmin = −0.17 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 1997a), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.028 (6) |
C7H9NO2 | V = 693.18 (18) Å3 |
Mr = 139.15 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.1211 (18) Å | µ = 0.10 mm−1 |
b = 7.5078 (11) Å | T = 291 K |
c = 7.9542 (12) Å | 0.47 × 0.29 × 0.24 mm |
β = 106.740 (2)° |
Bruker SMART CCD area-detector diffractometer | 1289 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1150 reflections with I > 2σ(I) |
Tmin = 0.954, Tmax = 0.977 | Rint = 0.013 |
4420 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.124 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.23 e Å−3 |
1289 reflections | Δρmin = −0.17 e Å−3 |
94 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | −0.02438 (10) | 0.26227 (16) | 0.71716 (18) | 0.0592 (4) | |
O2 | 0.35189 (12) | 0.50023 (17) | 0.5789 (2) | 0.0665 (4) | |
N1 | 0.11219 (10) | 0.07418 (16) | 0.67140 (17) | 0.0413 (4) | |
H1 | 0.0802 | −0.0242 | 0.6873 | 0.050* | |
C2 | 0.21757 (12) | 0.08393 (19) | 0.63349 (18) | 0.0367 (4) | |
C3 | 0.24331 (12) | 0.25712 (18) | 0.61258 (18) | 0.0360 (4) | |
C4 | 0.14733 (13) | 0.3716 (2) | 0.63916 (19) | 0.0396 (4) | |
H4A | 0.1099 | 0.4384 | 0.5337 | 0.048* | |
H4B | 0.1759 | 0.4541 | 0.7358 | 0.048* | |
C5 | 0.06589 (13) | 0.2374 (2) | 0.6804 (2) | 0.0412 (4) | |
C1 | 0.27636 (16) | −0.0892 (2) | 0.6268 (3) | 0.0529 (5) | |
H1A | 0.3499 | −0.0675 | 0.6079 | 0.079* | |
H1B | 0.2299 | −0.1601 | 0.5323 | 0.079* | |
H1C | 0.2871 | −0.1513 | 0.7358 | 0.079* | |
C6 | 0.34462 (13) | 0.3380 (2) | 0.57991 (19) | 0.0423 (4) | |
C7 | 0.44042 (14) | 0.2258 (3) | 0.5512 (2) | 0.0519 (5) | |
H7A | 0.4945 | 0.3008 | 0.5175 | 0.078* | |
H7B | 0.4091 | 0.1405 | 0.4600 | 0.078* | |
H7C | 0.4788 | 0.1643 | 0.6579 | 0.078* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0502 (7) | 0.0478 (7) | 0.0911 (10) | 0.0036 (5) | 0.0388 (7) | −0.0059 (6) |
O2 | 0.0699 (9) | 0.0400 (8) | 0.1009 (11) | −0.0114 (6) | 0.0427 (8) | 0.0001 (6) |
N1 | 0.0415 (7) | 0.0302 (7) | 0.0561 (8) | −0.0016 (5) | 0.0203 (6) | −0.0013 (5) |
C2 | 0.0359 (7) | 0.0346 (8) | 0.0399 (7) | 0.0025 (6) | 0.0112 (6) | −0.0013 (6) |
C3 | 0.0361 (8) | 0.0335 (8) | 0.0389 (8) | 0.0020 (6) | 0.0117 (6) | −0.0003 (5) |
C4 | 0.0451 (8) | 0.0303 (7) | 0.0455 (8) | 0.0036 (6) | 0.0164 (7) | 0.0003 (6) |
C5 | 0.0399 (8) | 0.0366 (8) | 0.0491 (8) | 0.0030 (6) | 0.0162 (6) | −0.0033 (6) |
C1 | 0.0532 (10) | 0.0368 (9) | 0.0721 (11) | 0.0095 (7) | 0.0236 (8) | 0.0013 (7) |
C6 | 0.0433 (8) | 0.0418 (9) | 0.0426 (8) | −0.0033 (7) | 0.0137 (6) | 0.0002 (6) |
C7 | 0.0403 (9) | 0.0604 (11) | 0.0589 (10) | −0.0007 (7) | 0.0204 (7) | 0.0018 (8) |
O1—C5 | 1.2255 (18) | C4—H4A | 0.9700 |
O2—C6 | 1.222 (2) | C4—H4B | 0.9700 |
N1—C5 | 1.3583 (19) | C1—H1A | 0.9600 |
N1—C2 | 1.3963 (19) | C1—H1B | 0.9600 |
N1—H1 | 0.8600 | C1—H1C | 0.9600 |
C2—C3 | 1.359 (2) | C6—C7 | 1.504 (2) |
C2—C1 | 1.490 (2) | C7—H7A | 0.9600 |
C3—C6 | 1.459 (2) | C7—H7B | 0.9600 |
C3—C4 | 1.5097 (19) | C7—H7C | 0.9600 |
C3—C4 | 1.511 (2) | ||
C5—N1—C2 | 112.43 (12) | N1—C5—C4 | 106.53 (12) |
C5—N1—H1 | 123.8 | C2—C1—H1A | 109.5 |
C2—N1—H1 | 123.8 | C2—C1—H1B | 109.5 |
C3—C2—N1 | 109.47 (12) | H1A—C1—H1B | 109.5 |
C3—C2—C1 | 134.51 (14) | C2—C1—H1C | 109.5 |
N1—C2—C1 | 116.02 (13) | H1A—C1—H1C | 109.5 |
C2—C3—C6 | 130.91 (14) | H1B—C1—H1C | 109.5 |
C2—C3—C4 | 108.33 (12) | O2—C6—C3 | 118.83 (15) |
C6—C3—C4 | 120.68 (13) | O2—C6—C7 | 119.82 (14) |
C3—C4—C5 | 103.21 (12) | C3—C6—C7 | 121.35 (14) |
C3—C4—H4A | 111.1 | C6—C7—H7A | 109.5 |
C5—C4—H4A | 111.1 | C6—C7—H7B | 109.5 |
C3—C4—H4B | 111.1 | H7A—C7—H7B | 109.5 |
C5—C4—H4B | 111.1 | C6—C7—H7C | 109.5 |
H4A—C4—H4B | 109.1 | H7A—C7—H7C | 109.5 |
O1—C5—N1 | 124.12 (14) | H7B—C7—H7C | 109.5 |
O1—C5—C4 | 129.35 (14) | ||
C5—N1—C2—C3 | −1.20 (18) | C2—N1—C5—O1 | −177.71 (14) |
C5—N1—C2—C1 | 178.13 (13) | C2—N1—C5—C4 | 1.70 (17) |
N1—C2—C3—C6 | 176.86 (14) | C3—C4—C5—O1 | 177.87 (16) |
C1—C2—C3—C6 | −2.3 (3) | C3—C4—C5—N1 | −1.49 (15) |
N1—C2—C3—C4 | 0.13 (16) | C2—C3—C6—O2 | −174.52 (17) |
C1—C2—C3—C4 | −179.03 (17) | C4—C3—C6—O2 | 1.9 (2) |
C2—C3—C4—C5 | 0.82 (15) | C2—C3—C6—C7 | 4.3 (2) |
C6—C3—C4—C5 | −176.30 (13) | C4—C3—C6—C7 | −179.34 (13) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.86 | 1.98 | 2.819 (2) | 166 |
Symmetry code: (i) −x, y−1/2, −z+3/2. |
Experimental details
(I) | (II) | |
Crystal data | ||
Chemical formula | C7H9NO3 | C7H9NO2 |
Mr | 155.15 | 139.15 |
Crystal system, space group | Monoclinic, P21/c | Monoclinic, P21/c |
Temperature (K) | 291 | 291 |
a, b, c (Å) | 12.377 (3), 7.562 (2), 7.880 (2) | 12.1211 (18), 7.5078 (11), 7.9542 (12) |
β (°) | 91.509 (3) | 106.740 (2) |
V (Å3) | 737.4 (3) | 693.18 (18) |
Z | 4 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.11 | 0.10 |
Crystal size (mm) | 0.36 × 0.32 × 0.23 | 0.47 × 0.29 × 0.24 |
Data collection | ||
Diffractometer | Bruker SMART CCD area-detector diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.958, 0.975 | 0.954, 0.977 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5325, 1371, 1095 | 4420, 1289, 1150 |
Rint | 0.045 | 0.013 |
(sin θ/λ)max (Å−1) | 0.606 | 0.606 |
Refinement | ||
R[F2 > 2σ(F2)], wR(F2), S | 0.048, 0.142, 1.31 | 0.039, 0.124, 1.08 |
No. of reflections | 1371 | 1289 |
No. of parameters | 102 | 94 |
H-atom treatment | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.24, −0.24 | 0.23, −0.17 |
Computer programs: SMART (Bruker, 1997), SMART, SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 1997a), SHELXL97 (Sheldrick, 1997a), SHELXTL (Sheldrick, 1997b), SHELXTL.
C5—N1—C2 | 112.74 (14) | C3—C4—C5 | 103.09 (14) |
C3—C2—C1 | 133.14 (17) | O1—C5—N1 | 124.57 (16) |
N1—C2—C1 | 117.68 (15) | O1—C5—C4 | 129.27 (15) |
C2—C3—C6 | 130.69 (16) | N1—C5—C4 | 106.16 (14) |
C6—C3—C4 | 120.47 (15) | ||
C5—N1—C2—C3 | 1.4 (2) | C3—C4—C5—O1 | −177.99 (18) |
C5—N1—C2—C1 | −178.83 (15) | C7—O3—C6—O2 | −0.9 (2) |
N1—C2—C3—C6 | −177.45 (15) | C2—C3—C6—O2 | 176.11 (17) |
N1—C2—C3—C4 | −0.10 (19) | C4—C3—C6—O2 | −1.0 (2) |
C2—C3—C4—C5 | −1.00 (16) | C4—C3—C6—O3 | 179.34 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.86 | 1.99 | 2.832 (2) | 167.6 |
Symmetry code: (i) −x+2, y−1/2, −z+5/2. |
O1—C5 | 1.2255 (18) | ||
C5—N1—C2 | 112.43 (12) | C6—C3—C4 | 120.68 (13) |
C3—C2—C1 | 134.51 (14) | C3—C4—C5 | 103.21 (12) |
N1—C2—C1 | 116.02 (13) | O1—C5—N1 | 124.12 (14) |
C2—C3—C6 | 130.91 (14) | O1—C5—C4 | 129.35 (14) |
C5—N1—C2—C3 | −1.20 (18) | C2—C3—C4—C5 | 0.82 (15) |
C5—N1—C2—C1 | 178.13 (13) | C3—C4—C5—O1 | 177.87 (16) |
N1—C2—C3—C6 | 176.86 (14) | C3—C4—C5—N1 | −1.49 (15) |
N1—C2—C3—C4 | 0.13 (16) | C2—C3—C6—O2 | −174.52 (17) |
C1—C2—C3—C4 | −179.03 (17) | C4—C3—C6—C7 | −179.34 (13) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.86 | 1.98 | 2.819 (2) | 166.4 |
Symmetry code: (i) −x, y−1/2, −z+3/2. |
As precursors for the synthesis of pyrrole derivatives, 2-pyrrolin-5-one derivatives have been prepared by the reaction of glyoxal with enaminoesters (San Feliciano et al., 1989). However, pyrrolinones accessible by this method are few in number. We report here the structures of two such compounds, namely 2-methyl-3-methoxycarbonyl-2-pyrrolin-5-one, (I) and 2-methyl-3-acetyl-2-pyrrolin-5-one, (II) (Figs. 1 and 2).
In each molecule, the five-membered ring (N1/C1–C4) is planar, with r.m.s deviations from the mean plane of 0.007 Å for (I) and 0.006 Å for (II). Within the pyrrolinone rings in (I) and (II), the bond distances provide evidence for π-conjugation and are different from those in substituted ethylenedi(2-pyrrolin-5-one) (Zhang et al., 2007). The N1—C2 and N1—C5 bonds [1.391 (2) and 1.359 (2) Å, respectively, for (I), and 1.396 (2) and 1.358 (2) Å, respectively, for (II)] are shorter than the corresponding bonds in ethylenedi(2-pyrrolin-5-one) [1.411 and 1.385 Å, respectively]. Conversely, the C2—C3 bond becomes longer [1.385 and 1.411 Å in (I) and (II), respectively, versus 1.349 Å in ethylenedi(2-pyrrolin-5-one)]. This indicates that the lone pair of electrons on atom N1 and the π electrons of C2═C3 in (I) and (II) exhibit significant delocalization compared with ethylenedi(2-pyrrolin-5-one).
In (I), the exocyclic bond angles show some significant variations. The two independent exocyclic angles (Table 1) at atom C2 differ by some 16°, while those at atom C3 differ by more than 10°. The sense of these deviations suggests strongly repulsive interactions between the methyl group on C2 and the methoxycarbonyl group, although there is a moderate intramolecular C—H···O hydrogen bond between them (Table 3). By contrast, the deviations of the angles (Table 4) at atoms C2 and C3 in (II) become larger, where there is no intramolecular interaction between methyl and acetyl groups. The sums of the three angles around atoms C2 and C3 in (I) are 360.00 (2) and 359.95 (2)°, respectively, and the corresponding values in (II) are 359.99 (2) and 359.92 (2)°, respectively.
It was found that the 1H NMR spectrum of compound (II) shows the methylene H atoms of the pyrrolinone ring as a doublet at δ = 3.34 p.p.m., with an identical coupling constant (J = 2 Hz) to the C2—CH3 H atoms. The feature is, however, inconsistent with that in (I), where the methylene H atoms give a quartet with coupling constant J = 2.4 Hz. This suggests that, even in solution, the methyl group bonded to C2 in (II) has a stable conformation with respect to the pyrrolinone ring.
In compound (I), the molecules are linked into zigzag chains by a single N—H···O hydrogen bond (Table 2). Heterocyclic atom N1 in the molecule at (x, y, z) acts as a hydrogen-bond donor to carbonyl atom O1 in the molecule at (2 − x, y − 1/2, 5/2 − z), thus forming a C(4) chain (Bernstein et al., 1995) running along the (1, y, 5/4) direction and generated by a 21 screw axis along (1, y, 5/4) (Fig. 3). Four chains of this type pass through each unit cell; two of these chains, running along the directions (1, y, 1/4) and (0, y, 1/4), are related to one another by translational symmetry operations and are antiparallel to the other two chains, running along the (1, y, 3/4) and (0, y, −1/4) directions. There are no direction-specific interactions between adjacent chains.
In a similar way, the supramolecular structure of compound (II) takes on a simple chain packing. For the sake of simplicity, we shall omit any further consideration of the intermolecular C—H···O interactions involving a C—H bond from a methyl group, which are unlikely to have any structural significance. The molecules of (II) are connected into infinite chains by a single N—H···O hydrogen bond (Table 4). Heterocyclic atom N1 in the molecule at (x, y, z) acts as a hydrogen-bond donor to carbonyl atom O1 in the molecule at (−x, y − 1/2, 3/2 − z), so generating a C(4) chain running along the (0, y, 3/4) direction and generated by a 21 screw axis along (0, y, 3/4) (Fig. 4). Four such chains pass through each unit cell; two of these chains, running along the directions (0, y, 3/4) and (1, y, 1/4), are related to one another by inversion and are hence antiparallel. There are no direction-specific interactions between adjacent chains.