This study of 3-(5-phenyl-1,3,4-oxadiazol-2-yl)-2H-chromen-2-one, C17H10N2O3, 1, and 3-[5-(pyridin-4-yl)-1,3,4-oxadiazol-2-yl]-2H-chromen-2-one, C16H9N3O3, 2, was performed on the assumption of the potential anticancer activity of the compounds. Three polymorphic structures for 1 and two polymorphic structures for 2 have been studied thoroughly. The strongest intermolecular interaction is stacking of the `head-to-head' type in all the studied crystals. The polymorphic structures of 1 differ with respect to the intermolecular interactions between stacked columns. Two of the polymorphs have a columnar or double columnar type of crystal organization, while the third polymorphic structure can be classified as columnar-layered. The difference between the two structures of 2 is less pronounced. Both crystals can be considered as having very similar arrangements of neighbouring columns. The formation of polymorphic modifications is caused by a subtle balance of very weak intermolecular interactions and packing differences can be identified only using an analysis based on a study of the pairwise interaction energies.
Supporting information
CCDC references: 1943293; 1943291; 1950669; 1943294; 1943292
For all structures, data collection: CrysAlis PRO (Rigaku OD, 2018); cell refinement: CrysAlis PRO (Rigaku OD, 2018); data reduction: CrysAlis PRO (Rigaku OD, 2018); program(s) used to solve structure: SHELXT2014 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2016 (Sheldrick, 2015b); software used to prepare material for publication: SHELXL2016 (Sheldrick, 2015b).
3-(5-Phenyl-1,3,4-oxadiazol-2-yl)-2
H-chromen-2-one (1A)
top
Crystal data top
C17H10N2O3 | F(000) = 600 |
Mr = 290.27 | Dx = 1.444 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 13.9075 (11) Å | Cell parameters from 945 reflections |
b = 5.1543 (5) Å | θ = 3.4–20.7° |
c = 18.8010 (16) Å | µ = 0.10 mm−1 |
β = 97.772 (8)° | T = 293 K |
V = 1335.3 (2) Å3 | Plate, colorless |
Z = 4 | 0.20 × 0.15 × 0.04 mm |
Data collection top
Rigaku Xcalibur Sapphire3 diffractometer | 2346 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1333 reflections with I > 2σ(I) |
Detector resolution: 16.1827 pixels mm-1 | Rint = 0.069 |
ω scans | θmax = 25.0°, θmin = 3.4° |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2018) | h = −16→16 |
Tmin = 0.004, Tmax = 1.000 | k = −6→6 |
9965 measured reflections | l = −22→20 |
Refinement top
Refinement on F2 | 7 restraints |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.078 | All H-atom parameters refined |
wR(F2) = 0.241 | w = 1/[σ2(Fo2) + (0.1369P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.97 | (Δ/σ)max < 0.001 |
2346 reflections | Δρmax = 0.39 e Å−3 |
239 parameters | Δρmin = −0.17 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.76161 (18) | 0.9365 (5) | 0.36464 (14) | 0.0785 (8) | |
O2 | 0.8494 (2) | 0.6267 (6) | 0.42134 (17) | 0.1013 (10) | |
O3 | 0.77974 (16) | 0.3365 (4) | 0.52195 (12) | 0.0673 (7) | |
N1 | 0.6349 (2) | 0.4322 (6) | 0.54983 (18) | 0.0793 (9) | |
N2 | 0.6746 (2) | 0.2312 (6) | 0.59440 (18) | 0.0802 (10) | |
C1 | 0.6774 (2) | 1.0762 (7) | 0.34981 (18) | 0.0649 (9) | |
C2 | 0.6745 (3) | 1.2661 (8) | 0.2993 (2) | 0.0798 (11) | |
H2 | 0.725 (3) | 1.271 (8) | 0.273 (2) | 0.103 (14)* | |
C3 | 0.5923 (3) | 1.4062 (8) | 0.2827 (2) | 0.0809 (12) | |
H3 | 0.586 (3) | 1.534 (9) | 0.243 (2) | 0.106 (14)* | |
C4 | 0.5128 (3) | 1.3634 (8) | 0.3170 (2) | 0.0758 (11) | |
H4 | 0.460 (3) | 1.457 (7) | 0.3123 (18) | 0.072 (11)* | |
C5 | 0.5145 (3) | 1.1734 (7) | 0.3685 (2) | 0.0736 (11) | |
H5 | 0.455 (3) | 1.141 (6) | 0.3922 (19) | 0.080 (10)* | |
C6 | 0.5976 (3) | 1.0226 (6) | 0.38567 (18) | 0.0641 (9) | |
C7 | 0.6081 (3) | 0.8218 (7) | 0.43839 (19) | 0.0683 (10) | |
H7 | 0.545 (3) | 0.780 (7) | 0.464 (2) | 0.088 (11)* | |
C8 | 0.6922 (2) | 0.6858 (6) | 0.45400 (18) | 0.0610 (8) | |
C9 | 0.7742 (3) | 0.7406 (7) | 0.41491 (19) | 0.0690 (9) | |
C10 | 0.6995 (2) | 0.4883 (7) | 0.50841 (18) | 0.0647 (9) | |
C11 | 0.7576 (3) | 0.1808 (7) | 0.57661 (19) | 0.0659 (10) | |
C12 | 0.8293 (3) | −0.0100 (7) | 0.6054 (2) | 0.0666 (9) | |
C13 | 0.8079 (3) | −0.1747 (9) | 0.6596 (2) | 0.0835 (12) | |
H13 | 0.754 (3) | −0.151 (6) | 0.6763 (17) | 0.065 (10)* | |
C14 | 0.8752 (4) | −0.3637 (9) | 0.6872 (3) | 0.0892 (13) | |
H14 | 0.864 (4) | −0.469 (10) | 0.725 (3) | 0.128 (18)* | |
C15 | 0.9606 (3) | −0.3862 (8) | 0.6591 (3) | 0.0829 (12) | |
H15 | 1.007 (3) | −0.510 (8) | 0.682 (2) | 0.102 (14)* | |
C16 | 0.9801 (4) | −0.2253 (9) | 0.6066 (3) | 0.0905 (13) | |
H16 | 1.038 (3) | −0.244 (7) | 0.587 (2) | 0.085 (12)* | |
C17 | 0.9157 (3) | −0.0342 (8) | 0.5799 (2) | 0.0797 (11) | |
H17 | 0.929 (3) | 0.090 (7) | 0.539 (2) | 0.088 (11)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0735 (16) | 0.0762 (17) | 0.0913 (18) | 0.0092 (13) | 0.0311 (13) | 0.0100 (14) |
O2 | 0.0741 (16) | 0.113 (2) | 0.123 (2) | 0.0253 (15) | 0.0391 (16) | 0.0243 (18) |
O3 | 0.0607 (14) | 0.0691 (15) | 0.0733 (16) | 0.0093 (12) | 0.0137 (11) | −0.0006 (12) |
N1 | 0.0653 (19) | 0.083 (2) | 0.092 (2) | 0.0100 (17) | 0.0189 (17) | 0.0072 (18) |
N2 | 0.070 (2) | 0.079 (2) | 0.094 (2) | −0.0001 (17) | 0.0204 (17) | 0.0036 (18) |
C1 | 0.061 (2) | 0.066 (2) | 0.067 (2) | 0.0077 (17) | 0.0074 (16) | −0.0127 (18) |
C2 | 0.085 (3) | 0.077 (3) | 0.082 (3) | 0.002 (2) | 0.028 (2) | 0.002 (2) |
C3 | 0.098 (3) | 0.074 (3) | 0.071 (3) | −0.001 (2) | 0.009 (2) | 0.001 (2) |
C4 | 0.076 (3) | 0.064 (2) | 0.084 (3) | 0.010 (2) | −0.001 (2) | −0.002 (2) |
C5 | 0.062 (2) | 0.076 (3) | 0.085 (3) | 0.0051 (19) | 0.0137 (19) | 0.002 (2) |
C6 | 0.075 (2) | 0.055 (2) | 0.063 (2) | 0.0030 (18) | 0.0088 (17) | −0.0033 (16) |
C7 | 0.0648 (16) | 0.070 (2) | 0.072 (2) | 0.0077 (15) | 0.0134 (16) | −0.0009 (18) |
C8 | 0.0606 (15) | 0.061 (2) | 0.062 (2) | 0.0047 (13) | 0.0104 (13) | −0.0088 (16) |
C9 | 0.0653 (17) | 0.069 (2) | 0.074 (2) | 0.0044 (15) | 0.0148 (15) | −0.0001 (18) |
C10 | 0.059 (2) | 0.067 (2) | 0.068 (2) | 0.0041 (18) | 0.0080 (16) | −0.0074 (17) |
C11 | 0.066 (2) | 0.061 (2) | 0.072 (2) | −0.0082 (18) | 0.0097 (17) | −0.0063 (17) |
C12 | 0.063 (2) | 0.058 (2) | 0.077 (2) | −0.0011 (17) | 0.0010 (17) | −0.0018 (17) |
C13 | 0.068 (3) | 0.086 (3) | 0.100 (3) | −0.003 (2) | 0.022 (2) | −0.002 (2) |
C14 | 0.098 (3) | 0.075 (3) | 0.093 (3) | −0.003 (3) | 0.005 (3) | 0.024 (2) |
C15 | 0.082 (3) | 0.066 (2) | 0.096 (3) | 0.006 (2) | −0.006 (2) | 0.002 (2) |
C16 | 0.084 (3) | 0.081 (3) | 0.108 (4) | 0.017 (3) | 0.018 (3) | 0.006 (3) |
C17 | 0.081 (3) | 0.075 (3) | 0.084 (3) | 0.008 (2) | 0.014 (2) | 0.010 (2) |
Geometric parameters (Å, º) top
O1—C1 | 1.371 (4) | C6—C7 | 1.427 (5) |
O1—C9 | 1.378 (4) | C7—C8 | 1.361 (5) |
O2—C9 | 1.191 (4) | C7—H7 | 1.08 (4) |
O3—C10 | 1.358 (4) | C8—C10 | 1.437 (5) |
O3—C11 | 1.371 (4) | C8—C9 | 1.466 (5) |
N1—C10 | 1.299 (4) | C11—C12 | 1.452 (5) |
N1—N2 | 1.398 (4) | C12—C17 | 1.358 (5) |
N2—C11 | 1.271 (4) | C12—C13 | 1.389 (6) |
C1—C2 | 1.361 (5) | C13—C14 | 1.401 (6) |
C1—C6 | 1.402 (5) | C13—H13 | 0.86 (3) |
C2—C3 | 1.352 (6) | C14—C15 | 1.368 (6) |
C2—H2 | 0.91 (5) | C14—H14 | 0.93 (5) |
C3—C4 | 1.372 (6) | C15—C16 | 1.345 (6) |
C3—H3 | 0.99 (4) | C15—H15 | 0.97 (4) |
C4—C5 | 1.375 (5) | C16—C17 | 1.379 (6) |
C4—H4 | 0.88 (4) | C16—H16 | 0.94 (4) |
C5—C6 | 1.394 (5) | C17—H17 | 1.03 (4) |
C5—H5 | 1.01 (4) | | |
| | | |
C1—O1—C9 | 123.4 (3) | O2—C9—O1 | 117.4 (3) |
C10—O3—C11 | 102.5 (3) | O2—C9—C8 | 125.9 (3) |
C10—N1—N2 | 106.0 (3) | O1—C9—C8 | 116.7 (3) |
C11—N2—N1 | 107.0 (3) | N1—C10—O3 | 112.1 (3) |
C2—C1—O1 | 117.6 (3) | N1—C10—C8 | 126.6 (3) |
C2—C1—C6 | 121.8 (3) | O3—C10—C8 | 121.3 (3) |
O1—C1—C6 | 120.6 (3) | N2—C11—O3 | 112.4 (3) |
C3—C2—C1 | 119.3 (4) | N2—C11—C12 | 130.0 (4) |
C3—C2—H2 | 124 (3) | O3—C11—C12 | 117.6 (3) |
C1—C2—H2 | 116 (3) | C17—C12—C13 | 119.4 (4) |
C2—C3—C4 | 121.1 (4) | C17—C12—C11 | 121.7 (4) |
C2—C3—H3 | 121 (3) | C13—C12—C11 | 118.9 (4) |
C4—C3—H3 | 118 (3) | C12—C13—C14 | 119.9 (4) |
C3—C4—C5 | 120.5 (4) | C12—C13—H13 | 118 (2) |
C3—C4—H4 | 126 (2) | C14—C13—H13 | 122 (2) |
C5—C4—H4 | 114 (2) | C15—C14—C13 | 119.1 (4) |
C4—C5—C6 | 119.7 (4) | C15—C14—H14 | 120 (3) |
C4—C5—H5 | 119 (2) | C13—C14—H14 | 121 (3) |
C6—C5—H5 | 121 (2) | C16—C15—C14 | 120.2 (4) |
C5—C6—C1 | 117.7 (3) | C16—C15—H15 | 123 (3) |
C5—C6—C7 | 124.7 (3) | C14—C15—H15 | 117 (3) |
C1—C6—C7 | 117.6 (3) | C15—C16—C17 | 121.5 (5) |
C8—C7—C6 | 121.9 (3) | C15—C16—H16 | 120 (2) |
C8—C7—H7 | 121.8 (19) | C17—C16—H16 | 118 (2) |
C6—C7—H7 | 116.3 (19) | C12—C17—C16 | 119.9 (4) |
C7—C8—C10 | 119.6 (3) | C12—C17—H17 | 117 (2) |
C7—C8—C9 | 119.8 (3) | C16—C17—H17 | 123 (2) |
C10—C8—C9 | 120.6 (3) | | |
| | | |
C10—N1—N2—C11 | −0.6 (4) | N2—N1—C10—O3 | 0.5 (4) |
C9—O1—C1—C2 | 179.5 (3) | N2—N1—C10—C8 | −179.1 (3) |
C9—O1—C1—C6 | −0.7 (5) | C11—O3—C10—N1 | −0.2 (4) |
O1—C1—C2—C3 | 179.3 (3) | C11—O3—C10—C8 | 179.4 (3) |
C6—C1—C2—C3 | −0.4 (6) | C7—C8—C10—N1 | −5.1 (6) |
C1—C2—C3—C4 | 1.3 (6) | C9—C8—C10—N1 | 175.3 (3) |
C2—C3—C4—C5 | −1.0 (6) | C7—C8—C10—O3 | 175.4 (3) |
C3—C4—C5—C6 | −0.3 (6) | C9—C8—C10—O3 | −4.2 (5) |
C4—C5—C6—C1 | 1.1 (5) | N1—N2—C11—O3 | 0.4 (4) |
C4—C5—C6—C7 | 179.5 (3) | N1—N2—C11—C12 | −180.0 (3) |
C2—C1—C6—C5 | −0.8 (5) | C10—O3—C11—N2 | −0.1 (4) |
O1—C1—C6—C5 | 179.4 (3) | C10—O3—C11—C12 | −179.8 (3) |
C2—C1—C6—C7 | −179.3 (3) | N2—C11—C12—C17 | −179.2 (4) |
O1—C1—C6—C7 | 1.0 (5) | O3—C11—C12—C17 | 0.4 (5) |
C5—C6—C7—C8 | −178.3 (3) | N2—C11—C12—C13 | 2.0 (6) |
C1—C6—C7—C8 | 0.1 (5) | O3—C11—C12—C13 | −178.4 (3) |
C6—C7—C8—C10 | 179.0 (3) | C17—C12—C13—C14 | −0.1 (6) |
C6—C7—C8—C9 | −1.4 (5) | C11—C12—C13—C14 | 178.8 (4) |
C1—O1—C9—O2 | 177.4 (3) | C12—C13—C14—C15 | −1.4 (7) |
C1—O1—C9—C8 | −0.6 (5) | C13—C14—C15—C16 | 1.3 (7) |
C7—C8—C9—O2 | −176.2 (4) | C14—C15—C16—C17 | 0.2 (7) |
C10—C8—C9—O2 | 3.4 (6) | C13—C12—C17—C16 | 1.6 (6) |
C7—C8—C9—O1 | 1.6 (5) | C11—C12—C17—C16 | −177.3 (3) |
C10—C8—C9—O1 | −178.8 (3) | C15—C16—C17—C12 | −1.7 (7) |
3-(5-Phenyl-1,3,4-oxadiazol-2-yl)-2
H-chromen-2-one (1B)
top
Crystal data top
C17H10N2O3 | F(000) = 600 |
Mr = 290.27 | Dx = 1.463 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 15.611 (5) Å | Cell parameters from 366 reflections |
b = 3.8414 (9) Å | θ = 5.4–22.3° |
c = 21.974 (7) Å | µ = 0.10 mm−1 |
β = 90.74 (3)° | T = 293 K |
V = 1317.6 (6) Å3 | Stick, colorless |
Z = 4 | 0.30 × 0.05 × 0.04 mm |
Data collection top
Rigaku Xcalibur Sapphire3 diffractometer | 2322 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1081 reflections with I > 2σ(I) |
Detector resolution: 16.1827 pixels mm-1 | Rint = 0.117 |
ω scans | θmax = 25.0°, θmin = 3.2° |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2018) | h = −16→18 |
Tmin = 0.135, Tmax = 1.000 | k = −4→4 |
7763 measured reflections | l = −22→26 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.067 | All H-atom parameters refined |
wR(F2) = 0.150 | w = 1/[σ2(Fo2) + (0.0255P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.90 | (Δ/σ)max < 0.001 |
2322 reflections | Δρmax = 0.18 e Å−3 |
239 parameters | Δρmin = −0.24 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.3572 (2) | 0.5709 (6) | 0.69352 (11) | 0.0607 (8) | |
O2 | 0.4902 (2) | 0.7312 (7) | 0.71082 (12) | 0.0737 (9) | |
O3 | 0.61618 (18) | 0.5524 (6) | 0.63231 (11) | 0.0523 (7) | |
N1 | 0.5785 (2) | 0.2576 (8) | 0.55023 (14) | 0.0598 (9) | |
N2 | 0.6674 (2) | 0.3032 (8) | 0.55050 (15) | 0.0608 (9) | |
C1 | 0.2931 (3) | 0.4297 (8) | 0.65701 (17) | 0.0509 (10) | |
C2 | 0.2117 (3) | 0.4353 (10) | 0.6799 (2) | 0.0562 (11) | |
H2 | 0.200 (2) | 0.515 (8) | 0.7224 (17) | 0.066 (11)* | |
C3 | 0.1463 (3) | 0.2962 (10) | 0.6439 (2) | 0.0637 (12) | |
H3 | 0.091 (3) | 0.297 (8) | 0.6621 (16) | 0.066 (12)* | |
C4 | 0.1634 (3) | 0.1614 (10) | 0.5872 (2) | 0.0600 (11) | |
H4 | 0.114 (2) | 0.061 (8) | 0.5600 (16) | 0.055 (10)* | |
C5 | 0.2450 (3) | 0.1563 (10) | 0.5651 (2) | 0.0562 (11) | |
H5 | 0.254 (3) | 0.076 (8) | 0.5259 (17) | 0.064 (12)* | |
C6 | 0.3129 (3) | 0.2907 (8) | 0.60069 (16) | 0.0475 (10) | |
C7 | 0.3999 (3) | 0.2915 (9) | 0.58276 (18) | 0.0489 (10) | |
H7 | 0.414 (2) | 0.206 (8) | 0.5423 (16) | 0.058 (10)* | |
C8 | 0.4626 (3) | 0.4269 (8) | 0.61863 (16) | 0.0464 (9) | |
C9 | 0.4408 (3) | 0.5845 (9) | 0.67627 (18) | 0.0554 (11) | |
C10 | 0.5498 (3) | 0.4098 (8) | 0.59875 (17) | 0.0473 (10) | |
C11 | 0.6864 (3) | 0.4774 (8) | 0.59857 (18) | 0.0495 (10) | |
C12 | 0.7707 (3) | 0.5818 (8) | 0.62124 (19) | 0.0535 (10) | |
C13 | 0.8415 (3) | 0.5264 (10) | 0.5849 (2) | 0.0629 (12) | |
H13 | 0.839 (2) | 0.437 (8) | 0.5452 (16) | 0.052 (11)* | |
C14 | 0.9227 (3) | 0.6098 (11) | 0.6064 (3) | 0.0708 (13) | |
H14 | 0.967 (3) | 0.581 (10) | 0.575 (2) | 0.103 (17)* | |
C15 | 0.9316 (4) | 0.7524 (11) | 0.6634 (3) | 0.0710 (14) | |
H15 | 0.987 (3) | 0.799 (9) | 0.6761 (18) | 0.069 (13)* | |
C16 | 0.8635 (3) | 0.8131 (10) | 0.6994 (2) | 0.0669 (12) | |
H16 | 0.869 (3) | 0.907 (10) | 0.743 (2) | 0.104 (16)* | |
C17 | 0.7818 (3) | 0.7333 (10) | 0.6778 (2) | 0.0620 (12) | |
H17 | 0.738 (2) | 0.769 (8) | 0.7022 (15) | 0.050 (11)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.061 (2) | 0.0764 (17) | 0.0452 (16) | 0.0058 (14) | 0.0052 (15) | −0.0090 (13) |
O2 | 0.071 (2) | 0.098 (2) | 0.0522 (17) | −0.0010 (16) | −0.0082 (17) | −0.0186 (16) |
O3 | 0.0524 (19) | 0.0598 (15) | 0.0445 (15) | −0.0009 (12) | −0.0060 (14) | −0.0036 (12) |
N1 | 0.054 (2) | 0.072 (2) | 0.053 (2) | −0.0013 (17) | −0.0006 (19) | −0.0099 (17) |
N2 | 0.054 (3) | 0.070 (2) | 0.058 (2) | 0.0015 (17) | −0.003 (2) | −0.0109 (18) |
C1 | 0.060 (3) | 0.048 (2) | 0.045 (2) | 0.0057 (19) | −0.003 (2) | 0.0018 (18) |
C2 | 0.057 (3) | 0.065 (2) | 0.046 (2) | 0.009 (2) | 0.010 (2) | 0.006 (2) |
C3 | 0.061 (3) | 0.062 (2) | 0.068 (3) | 0.004 (2) | 0.011 (3) | 0.004 (2) |
C4 | 0.055 (3) | 0.064 (2) | 0.062 (3) | −0.006 (2) | −0.003 (3) | −0.006 (2) |
C5 | 0.059 (3) | 0.060 (2) | 0.049 (3) | −0.005 (2) | 0.000 (2) | 0.001 (2) |
C6 | 0.052 (3) | 0.046 (2) | 0.044 (2) | 0.0045 (17) | −0.001 (2) | 0.0053 (18) |
C7 | 0.056 (3) | 0.048 (2) | 0.042 (2) | 0.0002 (18) | 0.004 (2) | 0.0021 (19) |
C8 | 0.051 (3) | 0.047 (2) | 0.040 (2) | −0.0003 (17) | 0.001 (2) | 0.0040 (17) |
C9 | 0.065 (3) | 0.060 (2) | 0.040 (2) | 0.006 (2) | −0.005 (2) | 0.000 (2) |
C10 | 0.052 (3) | 0.049 (2) | 0.041 (2) | −0.0019 (17) | −0.004 (2) | 0.0001 (18) |
C11 | 0.052 (3) | 0.048 (2) | 0.048 (2) | −0.0013 (18) | 0.000 (2) | −0.0024 (19) |
C12 | 0.054 (3) | 0.045 (2) | 0.062 (3) | −0.0015 (17) | −0.004 (2) | 0.0019 (19) |
C13 | 0.065 (3) | 0.067 (3) | 0.056 (3) | 0.000 (2) | 0.003 (3) | −0.001 (2) |
C14 | 0.060 (4) | 0.071 (3) | 0.081 (4) | 0.002 (2) | 0.003 (3) | 0.005 (3) |
C15 | 0.058 (4) | 0.064 (3) | 0.090 (4) | −0.009 (2) | −0.020 (3) | −0.003 (3) |
C16 | 0.063 (4) | 0.069 (3) | 0.068 (3) | −0.005 (2) | −0.008 (3) | −0.005 (2) |
C17 | 0.061 (3) | 0.064 (3) | 0.061 (3) | 0.001 (2) | −0.002 (3) | −0.005 (2) |
Geometric parameters (Å, º) top
O1—C9 | 1.364 (5) | C6—C7 | 1.418 (5) |
O1—C1 | 1.386 (5) | C7—C8 | 1.353 (5) |
O2—C9 | 1.214 (5) | C7—H7 | 0.98 (3) |
O3—C11 | 1.362 (4) | C8—C10 | 1.437 (5) |
O3—C10 | 1.378 (4) | C8—C9 | 1.448 (5) |
N1—C10 | 1.300 (4) | C11—C12 | 1.458 (5) |
N1—N2 | 1.399 (4) | C12—C17 | 1.381 (5) |
N2—C11 | 1.282 (4) | C12—C13 | 1.388 (6) |
C1—C2 | 1.372 (6) | C13—C14 | 1.385 (6) |
C1—C6 | 1.387 (5) | C13—H13 | 0.94 (3) |
C2—C3 | 1.390 (6) | C14—C15 | 1.374 (7) |
C2—H2 | 1.00 (3) | C14—H14 | 0.99 (5) |
C3—C4 | 1.378 (6) | C15—C16 | 1.354 (6) |
C3—H3 | 0.96 (4) | C15—H15 | 0.93 (4) |
C4—C5 | 1.369 (6) | C16—C17 | 1.389 (6) |
C4—H4 | 1.04 (4) | C16—H16 | 1.03 (4) |
C5—C6 | 1.407 (5) | C17—H17 | 0.89 (3) |
C5—H5 | 0.93 (3) | | |
| | | |
C9—O1—C1 | 122.7 (3) | O2—C9—O1 | 116.5 (4) |
C11—O3—C10 | 103.3 (3) | O2—C9—C8 | 125.9 (4) |
C10—N1—N2 | 107.0 (3) | O1—C9—C8 | 117.6 (4) |
C11—N2—N1 | 106.7 (3) | N1—C10—O3 | 110.7 (4) |
C2—C1—O1 | 116.6 (4) | N1—C10—C8 | 127.4 (4) |
C2—C1—C6 | 123.5 (4) | O3—C10—C8 | 121.9 (3) |
O1—C1—C6 | 119.9 (4) | N2—C11—O3 | 112.3 (4) |
C1—C2—C3 | 117.6 (4) | N2—C11—C12 | 128.5 (4) |
C1—C2—H2 | 122 (2) | O3—C11—C12 | 119.0 (3) |
C3—C2—H2 | 120 (2) | C17—C12—C13 | 119.4 (4) |
C4—C3—C2 | 120.5 (5) | C17—C12—C11 | 121.7 (4) |
C4—C3—H3 | 124 (2) | C13—C12—C11 | 118.9 (4) |
C2—C3—H3 | 115 (2) | C14—C13—C12 | 120.1 (5) |
C5—C4—C3 | 121.2 (5) | C14—C13—H13 | 115 (2) |
C5—C4—H4 | 118.2 (19) | C12—C13—H13 | 125 (2) |
C3—C4—H4 | 121 (2) | C15—C14—C13 | 118.9 (5) |
C4—C5—C6 | 119.7 (4) | C15—C14—H14 | 128 (3) |
C4—C5—H5 | 119 (3) | C13—C14—H14 | 113 (3) |
C6—C5—H5 | 121 (3) | C16—C15—C14 | 122.1 (5) |
C1—C6—C5 | 117.5 (4) | C16—C15—H15 | 122 (3) |
C1—C6—C7 | 118.2 (4) | C14—C15—H15 | 116 (3) |
C5—C6—C7 | 124.3 (4) | C15—C16—C17 | 119.1 (5) |
C8—C7—C6 | 121.8 (4) | C15—C16—H16 | 123 (3) |
C8—C7—H7 | 119 (2) | C17—C16—H16 | 118 (3) |
C6—C7—H7 | 119 (2) | C12—C17—C16 | 120.3 (5) |
C7—C8—C10 | 119.1 (3) | C12—C17—H17 | 121 (2) |
C7—C8—C9 | 119.6 (4) | C16—C17—H17 | 118 (2) |
C10—C8—C9 | 121.3 (4) | | |
| | | |
C10—N1—N2—C11 | 0.1 (4) | N2—N1—C10—O3 | −0.9 (4) |
C9—O1—C1—C2 | −179.5 (3) | N2—N1—C10—C8 | −178.8 (3) |
C9—O1—C1—C6 | 0.8 (5) | C11—O3—C10—N1 | 1.3 (4) |
O1—C1—C2—C3 | 179.8 (3) | C11—O3—C10—C8 | 179.3 (3) |
C6—C1—C2—C3 | −0.6 (6) | C7—C8—C10—N1 | −4.3 (6) |
C1—C2—C3—C4 | −0.6 (6) | C9—C8—C10—N1 | 175.4 (3) |
C2—C3—C4—C5 | 0.9 (6) | C7—C8—C10—O3 | 177.9 (3) |
C3—C4—C5—C6 | 0.0 (6) | C9—C8—C10—O3 | −2.3 (5) |
C2—C1—C6—C5 | 1.4 (5) | N1—N2—C11—O3 | 0.8 (4) |
O1—C1—C6—C5 | −179.0 (3) | N1—N2—C11—C12 | 177.4 (3) |
C2—C1—C6—C7 | −178.3 (3) | C10—O3—C11—N2 | −1.3 (4) |
O1—C1—C6—C7 | 1.3 (5) | C10—O3—C11—C12 | −178.2 (3) |
C4—C5—C6—C1 | −1.1 (5) | N2—C11—C12—C17 | −172.0 (4) |
C4—C5—C6—C7 | 178.6 (3) | O3—C11—C12—C17 | 4.4 (5) |
C1—C6—C7—C8 | −0.8 (5) | N2—C11—C12—C13 | 7.9 (6) |
C5—C6—C7—C8 | 179.5 (3) | O3—C11—C12—C13 | −175.7 (3) |
C6—C7—C8—C10 | 178.0 (3) | C17—C12—C13—C14 | 2.5 (6) |
C6—C7—C8—C9 | −1.7 (5) | C11—C12—C13—C14 | −177.3 (4) |
C1—O1—C9—O2 | 176.2 (3) | C12—C13—C14—C15 | −1.0 (6) |
C1—O1—C9—C8 | −3.3 (5) | C13—C14—C15—C16 | 0.2 (7) |
C7—C8—C9—O2 | −175.7 (4) | C14—C15—C16—C17 | −0.9 (7) |
C10—C8—C9—O2 | 4.6 (6) | C13—C12—C17—C16 | −3.3 (6) |
C7—C8—C9—O1 | 3.7 (5) | C11—C12—C17—C16 | 176.6 (4) |
C10—C8—C9—O1 | −176.0 (3) | C15—C16—C17—C12 | 2.4 (6) |
3-(5-Phenyl-1,3,4-oxadiazol-2-yl)-2
H-chromen-2-one (1C)
top
Crystal data top
C17H10N2O3 | F(000) = 600 |
Mr = 290.27 | Dx = 1.481 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 3.9158 (8) Å | Cell parameters from 566 reflections |
b = 17.717 (3) Å | θ = 4.0–20.5° |
c = 18.832 (3) Å | µ = 0.10 mm−1 |
β = 94.670 (16)° | T = 293 K |
V = 1302.1 (4) Å3 | Stick, colorless |
Z = 4 | 0.30 × 0.05 × 0.04 mm |
Data collection top
Rigaku Xcalibur Sapphire3 diffractometer | 2293 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1176 reflections with I > 2σ(I) |
Detector resolution: 16.1827 pixels mm-1 | Rint = 0.113 |
ω scans | θmax = 25.0°, θmin = 3.5° |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2018) | h = −4→4 |
Tmin = 0.169, Tmax = 1.000 | k = −21→20 |
9086 measured reflections | l = −22→22 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.071 | All H-atom parameters refined |
wR(F2) = 0.192 | w = 1/[σ2(Fo2) + (0.0721P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.95 | (Δ/σ)max < 0.001 |
2293 reflections | Δρmax = 0.20 e Å−3 |
239 parameters | Δρmin = −0.26 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.4135 (6) | 0.46350 (15) | 0.74455 (14) | 0.0677 (8) | |
O2 | 0.3295 (8) | 0.35074 (16) | 0.69807 (16) | 0.0822 (9) | |
O3 | 0.5322 (6) | 0.31861 (13) | 0.56545 (13) | 0.0591 (7) | |
N1 | 0.8223 (8) | 0.40721 (18) | 0.51393 (18) | 0.0680 (10) | |
N2 | 0.8019 (8) | 0.34341 (19) | 0.46962 (18) | 0.0684 (10) | |
C1 | 0.5246 (9) | 0.5372 (2) | 0.7417 (2) | 0.0572 (10) | |
C2 | 0.4804 (10) | 0.5823 (3) | 0.7995 (2) | 0.0666 (11) | |
H2 | 0.376 (9) | 0.565 (2) | 0.840 (2) | 0.068 (11)* | |
C3 | 0.5861 (11) | 0.6569 (3) | 0.7979 (3) | 0.0709 (12) | |
H3 | 0.529 (8) | 0.686 (2) | 0.836 (2) | 0.061 (11)* | |
C4 | 0.7348 (10) | 0.6852 (3) | 0.7395 (2) | 0.0680 (11) | |
H4 | 0.815 (10) | 0.736 (3) | 0.740 (2) | 0.095 (15)* | |
C5 | 0.7788 (9) | 0.6396 (2) | 0.6823 (2) | 0.0595 (10) | |
H5 | 0.889 (8) | 0.659 (2) | 0.639 (2) | 0.067 (11)* | |
C6 | 0.6744 (8) | 0.5640 (2) | 0.68265 (19) | 0.0525 (9) | |
C7 | 0.7103 (9) | 0.5130 (2) | 0.6254 (2) | 0.0544 (10) | |
H7 | 0.811 (8) | 0.5285 (19) | 0.5889 (19) | 0.049 (10)* | |
C8 | 0.6056 (8) | 0.4399 (2) | 0.62857 (19) | 0.0521 (9) | |
C9 | 0.4420 (10) | 0.4130 (2) | 0.6892 (2) | 0.0604 (10) | |
C10 | 0.6590 (9) | 0.3905 (2) | 0.5686 (2) | 0.0529 (9) | |
C11 | 0.6295 (8) | 0.2934 (2) | 0.5017 (2) | 0.0562 (10) | |
C12 | 0.5312 (8) | 0.2181 (2) | 0.4767 (2) | 0.0559 (10) | |
C13 | 0.5921 (10) | 0.1977 (3) | 0.4081 (2) | 0.0631 (11) | |
H13 | 0.681 (9) | 0.232 (2) | 0.374 (2) | 0.084 (13)* | |
C14 | 0.4956 (10) | 0.1269 (3) | 0.3825 (3) | 0.0694 (12) | |
H14 | 0.553 (10) | 0.115 (2) | 0.334 (3) | 0.089 (14)* | |
C15 | 0.3526 (11) | 0.0765 (3) | 0.4266 (3) | 0.0761 (13) | |
H15 | 0.318 (11) | 0.026 (3) | 0.416 (3) | 0.106 (16)* | |
C16 | 0.2963 (11) | 0.0968 (3) | 0.4957 (3) | 0.0717 (12) | |
H16 | 0.203 (10) | 0.061 (2) | 0.529 (2) | 0.085 (13)* | |
C17 | 0.3869 (9) | 0.1679 (2) | 0.5209 (2) | 0.0631 (11) | |
H17 | 0.321 (8) | 0.180 (2) | 0.570 (2) | 0.068 (11)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0903 (18) | 0.0551 (17) | 0.0592 (17) | 0.0011 (14) | 0.0140 (14) | 0.0090 (15) |
O2 | 0.120 (2) | 0.0509 (18) | 0.079 (2) | −0.0079 (15) | 0.0280 (18) | 0.0108 (16) |
O3 | 0.0725 (15) | 0.0446 (16) | 0.0610 (17) | −0.0036 (12) | 0.0103 (13) | 0.0020 (13) |
N1 | 0.087 (2) | 0.049 (2) | 0.070 (2) | −0.0105 (16) | 0.0225 (19) | −0.0029 (18) |
N2 | 0.092 (2) | 0.052 (2) | 0.063 (2) | −0.0093 (17) | 0.0211 (18) | −0.0050 (18) |
C1 | 0.066 (2) | 0.049 (2) | 0.055 (2) | 0.0071 (18) | −0.0011 (18) | 0.000 (2) |
C2 | 0.076 (3) | 0.072 (3) | 0.052 (3) | 0.005 (2) | 0.007 (2) | 0.001 (2) |
C3 | 0.080 (3) | 0.071 (3) | 0.062 (3) | 0.008 (2) | 0.006 (2) | −0.013 (3) |
C4 | 0.079 (3) | 0.057 (3) | 0.067 (3) | 0.000 (2) | 0.003 (2) | −0.013 (2) |
C5 | 0.070 (2) | 0.054 (2) | 0.056 (2) | −0.0019 (18) | 0.008 (2) | 0.002 (2) |
C6 | 0.0535 (19) | 0.052 (2) | 0.051 (2) | −0.0022 (17) | 0.0002 (17) | 0.0021 (19) |
C7 | 0.065 (2) | 0.052 (3) | 0.046 (2) | 0.0008 (18) | 0.0064 (19) | 0.002 (2) |
C8 | 0.057 (2) | 0.046 (2) | 0.053 (2) | 0.0021 (17) | 0.0000 (17) | 0.0067 (19) |
C9 | 0.077 (2) | 0.049 (2) | 0.056 (2) | 0.006 (2) | 0.011 (2) | 0.006 (2) |
C10 | 0.0556 (19) | 0.044 (2) | 0.059 (2) | −0.0006 (17) | 0.0028 (17) | 0.0036 (19) |
C11 | 0.058 (2) | 0.053 (3) | 0.057 (3) | 0.0040 (18) | 0.0059 (18) | 0.001 (2) |
C12 | 0.060 (2) | 0.047 (2) | 0.060 (2) | 0.0025 (17) | 0.0040 (18) | −0.001 (2) |
C13 | 0.074 (2) | 0.057 (3) | 0.059 (3) | 0.005 (2) | 0.009 (2) | −0.001 (2) |
C14 | 0.080 (3) | 0.066 (3) | 0.061 (3) | 0.005 (2) | 0.006 (2) | −0.008 (3) |
C15 | 0.084 (3) | 0.052 (3) | 0.092 (4) | 0.000 (2) | 0.001 (3) | −0.009 (3) |
C16 | 0.084 (3) | 0.055 (3) | 0.077 (3) | −0.007 (2) | 0.008 (2) | 0.003 (3) |
C17 | 0.069 (2) | 0.056 (3) | 0.065 (3) | −0.003 (2) | 0.009 (2) | −0.002 (2) |
Geometric parameters (Å, º) top
O1—C1 | 1.380 (4) | C6—C7 | 1.422 (5) |
O1—C9 | 1.385 (4) | C7—C8 | 1.361 (5) |
O2—C9 | 1.205 (4) | C7—H7 | 0.87 (3) |
O3—C11 | 1.363 (4) | C8—C9 | 1.436 (5) |
O3—C10 | 1.367 (4) | C8—C10 | 1.457 (5) |
N1—C10 | 1.290 (5) | C11—C12 | 1.457 (5) |
N1—N2 | 1.403 (4) | C12—C17 | 1.370 (5) |
N2—C11 | 1.293 (4) | C12—C13 | 1.381 (5) |
C1—C2 | 1.371 (5) | C13—C14 | 1.386 (6) |
C1—C6 | 1.383 (5) | C13—H13 | 0.97 (4) |
C2—C3 | 1.385 (6) | C14—C15 | 1.370 (6) |
C2—H2 | 0.95 (4) | C14—H14 | 0.98 (4) |
C3—C4 | 1.380 (6) | C15—C16 | 1.384 (6) |
C3—H3 | 0.92 (4) | C15—H15 | 0.92 (5) |
C4—C5 | 1.369 (5) | C16—C17 | 1.382 (6) |
C4—H4 | 0.96 (4) | C16—H16 | 0.99 (4) |
C5—C6 | 1.401 (5) | C17—H17 | 1.00 (4) |
C5—H5 | 1.02 (4) | | |
| | | |
C1—O1—C9 | 122.5 (3) | O2—C9—O1 | 115.7 (3) |
C11—O3—C10 | 102.5 (3) | O2—C9—C8 | 127.3 (4) |
C10—N1—N2 | 106.4 (3) | O1—C9—C8 | 116.9 (3) |
C11—N2—N1 | 106.3 (3) | N1—C10—O3 | 112.4 (3) |
C2—C1—O1 | 117.4 (4) | N1—C10—C8 | 126.3 (3) |
C2—C1—C6 | 121.9 (4) | O3—C10—C8 | 121.3 (3) |
O1—C1—C6 | 120.8 (4) | N2—C11—O3 | 112.4 (3) |
C1—C2—C3 | 118.7 (4) | N2—C11—C12 | 127.6 (4) |
C1—C2—H2 | 123 (2) | O3—C11—C12 | 119.9 (3) |
C3—C2—H2 | 118 (2) | C17—C12—C13 | 120.7 (4) |
C4—C3—C2 | 120.7 (5) | C17—C12—C11 | 120.6 (4) |
C4—C3—H3 | 123 (2) | C13—C12—C11 | 118.7 (4) |
C2—C3—H3 | 116 (2) | C12—C13—C14 | 120.0 (4) |
C5—C4—C3 | 120.0 (4) | C12—C13—H13 | 123 (2) |
C5—C4—H4 | 121 (3) | C14—C13—H13 | 117 (2) |
C3—C4—H4 | 119 (3) | C15—C14—C13 | 119.5 (5) |
C4—C5—C6 | 120.4 (4) | C15—C14—H14 | 124 (3) |
C4—C5—H5 | 122 (2) | C13—C14—H14 | 116 (3) |
C6—C5—H5 | 118 (2) | C14—C15—C16 | 120.3 (5) |
C1—C6—C5 | 118.3 (4) | C14—C15—H15 | 124 (3) |
C1—C6—C7 | 117.9 (4) | C16—C15—H15 | 115 (3) |
C5—C6—C7 | 123.8 (4) | C17—C16—C15 | 120.3 (5) |
C8—C7—C6 | 121.4 (4) | C17—C16—H16 | 118 (2) |
C8—C7—H7 | 120 (2) | C15—C16—H16 | 122 (2) |
C6—C7—H7 | 119 (2) | C12—C17—C16 | 119.2 (4) |
C7—C8—C9 | 120.5 (4) | C12—C17—H17 | 125 (2) |
C7—C8—C10 | 118.3 (3) | C16—C17—H17 | 115 (2) |
C9—C8—C10 | 121.2 (3) | | |
| | | |
C10—N1—N2—C11 | −0.4 (4) | N2—N1—C10—O3 | 1.1 (4) |
C9—O1—C1—C2 | 179.4 (3) | N2—N1—C10—C8 | −178.8 (3) |
C9—O1—C1—C6 | −0.6 (5) | C11—O3—C10—N1 | −1.3 (4) |
O1—C1—C2—C3 | −179.3 (3) | C11—O3—C10—C8 | 178.6 (3) |
C6—C1—C2—C3 | 0.7 (6) | C7—C8—C10—N1 | 5.9 (6) |
C1—C2—C3—C4 | −0.3 (6) | C9—C8—C10—N1 | −175.1 (3) |
C2—C3—C4—C5 | 0.1 (6) | C7—C8—C10—O3 | −174.0 (3) |
C3—C4—C5—C6 | −0.2 (6) | C9—C8—C10—O3 | 5.1 (5) |
C2—C1—C6—C5 | −0.8 (5) | N1—N2—C11—O3 | −0.4 (4) |
O1—C1—C6—C5 | 179.2 (3) | N1—N2—C11—C12 | 178.4 (3) |
C2—C1—C6—C7 | 179.8 (3) | C10—O3—C11—N2 | 1.0 (4) |
O1—C1—C6—C7 | −0.2 (5) | C10—O3—C11—C12 | −177.9 (3) |
C4—C5—C6—C1 | 0.5 (5) | N2—C11—C12—C17 | 171.4 (4) |
C4—C5—C6—C7 | 179.9 (3) | O3—C11—C12—C17 | −9.9 (5) |
C1—C6—C7—C8 | −0.9 (5) | N2—C11—C12—C13 | −7.4 (6) |
C5—C6—C7—C8 | 179.8 (3) | O3—C11—C12—C13 | 171.3 (3) |
C6—C7—C8—C9 | 2.5 (5) | C17—C12—C13—C14 | 2.4 (6) |
C6—C7—C8—C10 | −178.4 (3) | C11—C12—C13—C14 | −178.8 (3) |
C1—O1—C9—O2 | −178.8 (3) | C12—C13—C14—C15 | −2.6 (6) |
C1—O1—C9—C8 | 2.1 (5) | C13—C14—C15—C16 | 1.8 (6) |
C7—C8—C9—O2 | 177.9 (4) | C14—C15—C16—C17 | −0.7 (7) |
C10—C8—C9—O2 | −1.1 (6) | C13—C12—C17—C16 | −1.3 (6) |
C7—C8—C9—O1 | −3.1 (5) | C11—C12—C17—C16 | 180.0 (3) |
C10—C8—C9—O1 | 177.9 (3) | C15—C16—C17—C12 | 0.4 (6) |
3-[5-(Pyridin-4-yl)-1,3,4-oxadiazol-2-yl]-2
H-chromen-2-one (2A)
top
Crystal data top
C16H9N3O3 | F(000) = 300 |
Mr = 291.26 | Dx = 1.523 Mg m−3 |
Monoclinic, Pn | Mo Kα radiation, λ = 0.71073 Å |
a = 3.7788 (9) Å | Cell parameters from 939 reflections |
b = 9.9655 (17) Å | θ = 4.1–22.1° |
c = 16.899 (3) Å | µ = 0.11 mm−1 |
β = 93.466 (19)° | T = 293 K |
V = 635.2 (2) Å3 | Stick, colorless |
Z = 2 | 0.30 × 0.05 × 0.05 mm |
Data collection top
Rigaku Xcalibur Sapphire3 diffractometer | 2204 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1512 reflections with I > 2σ(I) |
Detector resolution: 16.1827 pixels mm-1 | Rint = 0.110 |
ω scans | θmax = 25.0°, θmin = 3.2° |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2018) | h = −4→4 |
Tmin = 0.527, Tmax = 1.000 | k = −11→11 |
7248 measured reflections | l = −20→20 |
Refinement top
Refinement on F2 | Hydrogen site location: difference Fourier map |
Least-squares matrix: full | All H-atom parameters refined |
R[F2 > 2σ(F2)] = 0.079 | w = 1/[σ2(Fo2) + (0.0971P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.210 | (Δ/σ)max < 0.001 |
S = 1.00 | Δρmax = 0.25 e Å−3 |
2204 reflections | Δρmin = −0.24 e Å−3 |
235 parameters | Absolute structure: Flack x determined using 423 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons et al., 2013) |
2 restraints | Absolute structure parameter: −0.4 (10) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.7514 (13) | −0.0579 (6) | 0.5152 (3) | 0.0615 (14) | |
O2 | 0.7840 (19) | 0.1020 (7) | 0.4263 (4) | 0.0807 (19) | |
O3 | 0.5099 (12) | 0.3509 (5) | 0.4541 (3) | 0.0557 (14) | |
N1 | 0.2551 (18) | 0.3788 (7) | 0.5666 (4) | 0.0664 (19) | |
N2 | 0.223 (2) | 0.4985 (7) | 0.5242 (4) | 0.0681 (19) | |
N3 | 0.495 (2) | 0.7525 (8) | 0.2707 (5) | 0.072 (2) | |
C1 | 0.6713 (19) | −0.1059 (8) | 0.5884 (5) | 0.0537 (18) | |
C2 | 0.7371 (19) | −0.2360 (8) | 0.6062 (5) | 0.058 (2) | |
H2 | 0.81 (2) | −0.296 (8) | 0.578 (5) | 0.06 (3)* | |
C3 | 0.666 (2) | −0.2873 (9) | 0.6784 (6) | 0.066 (2) | |
H3 | 0.69 (2) | −0.391 (9) | 0.693 (5) | 0.07 (2)* | |
C4 | 0.534 (2) | −0.2017 (9) | 0.7362 (6) | 0.066 (2) | |
H4 | 0.48 (2) | −0.245 (8) | 0.790 (5) | 0.08 (3)* | |
C5 | 0.462 (2) | −0.0703 (8) | 0.7183 (5) | 0.0600 (19) | |
H5 | 0.35 (2) | −0.010 (9) | 0.753 (5) | 0.07 (3)* | |
C6 | 0.5283 (19) | −0.0186 (7) | 0.6438 (5) | 0.0507 (17) | |
C7 | 0.4593 (19) | 0.1144 (8) | 0.6193 (4) | 0.0533 (18) | |
H7 | 0.34 (2) | 0.173 (8) | 0.655 (4) | 0.06 (2)* | |
C8 | 0.5229 (18) | 0.1598 (7) | 0.5462 (4) | 0.0492 (16) | |
C9 | 0.694 (2) | 0.0716 (8) | 0.4909 (5) | 0.061 (2) | |
C10 | 0.430 (2) | 0.2950 (8) | 0.5246 (5) | 0.0573 (19) | |
C11 | 0.3753 (19) | 0.4780 (8) | 0.4582 (5) | 0.0545 (19) | |
C12 | 0.4201 (18) | 0.5719 (8) | 0.3947 (4) | 0.0545 (18) | |
C13 | 0.331 (2) | 0.7062 (9) | 0.4032 (6) | 0.062 (2) | |
H13 | 0.26 (2) | 0.738 (8) | 0.454 (5) | 0.06 (2)* | |
C14 | 0.375 (3) | 0.7914 (10) | 0.3395 (6) | 0.072 (2) | |
H14 | 0.31 (3) | 0.897 (10) | 0.348 (6) | 0.09 (3)* | |
C15 | 0.577 (2) | 0.6252 (11) | 0.2656 (6) | 0.070 (2) | |
H15 | 0.64 (2) | 0.609 (10) | 0.212 (6) | 0.08 (3)* | |
C16 | 0.543 (2) | 0.5308 (9) | 0.3236 (5) | 0.061 (2) | |
H16 | 0.62 (2) | 0.440 (8) | 0.321 (5) | 0.06 (2)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.058 (3) | 0.065 (4) | 0.063 (3) | 0.003 (2) | 0.011 (3) | −0.003 (3) |
O2 | 0.106 (5) | 0.075 (4) | 0.064 (4) | 0.011 (3) | 0.031 (3) | 0.004 (3) |
O3 | 0.054 (3) | 0.054 (3) | 0.060 (3) | 0.002 (2) | 0.012 (2) | 0.003 (2) |
N1 | 0.069 (4) | 0.056 (4) | 0.076 (5) | 0.006 (3) | 0.018 (4) | −0.003 (3) |
N2 | 0.075 (5) | 0.068 (4) | 0.063 (4) | 0.006 (3) | 0.018 (4) | 0.000 (3) |
N3 | 0.070 (5) | 0.077 (5) | 0.070 (5) | −0.009 (4) | 0.009 (4) | 0.007 (4) |
C1 | 0.050 (4) | 0.061 (5) | 0.050 (4) | −0.001 (3) | 0.006 (3) | −0.003 (3) |
C2 | 0.049 (5) | 0.057 (5) | 0.069 (6) | 0.006 (3) | 0.005 (4) | −0.007 (4) |
C3 | 0.060 (5) | 0.062 (6) | 0.074 (6) | −0.002 (4) | −0.004 (4) | 0.000 (4) |
C4 | 0.060 (5) | 0.068 (6) | 0.071 (6) | −0.009 (4) | 0.007 (4) | 0.011 (4) |
C5 | 0.054 (4) | 0.063 (5) | 0.063 (5) | −0.001 (4) | 0.005 (4) | 0.000 (4) |
C6 | 0.045 (4) | 0.053 (4) | 0.055 (4) | 0.001 (3) | 0.008 (3) | 0.000 (3) |
C7 | 0.047 (4) | 0.059 (5) | 0.055 (5) | 0.006 (3) | 0.005 (3) | −0.006 (4) |
C8 | 0.046 (4) | 0.049 (4) | 0.053 (4) | 0.000 (3) | 0.012 (3) | 0.000 (3) |
C9 | 0.063 (5) | 0.055 (5) | 0.066 (6) | 0.002 (4) | 0.011 (4) | −0.007 (4) |
C10 | 0.056 (4) | 0.058 (5) | 0.058 (5) | −0.006 (3) | 0.008 (3) | 0.003 (4) |
C11 | 0.059 (5) | 0.058 (4) | 0.047 (4) | −0.002 (3) | 0.004 (3) | 0.002 (3) |
C12 | 0.042 (4) | 0.070 (5) | 0.052 (5) | −0.010 (3) | 0.005 (3) | 0.004 (3) |
C13 | 0.061 (5) | 0.062 (5) | 0.063 (6) | −0.004 (4) | 0.011 (4) | 0.003 (4) |
C14 | 0.078 (6) | 0.061 (6) | 0.077 (6) | −0.004 (4) | 0.002 (5) | 0.010 (4) |
C15 | 0.064 (5) | 0.084 (7) | 0.065 (6) | −0.007 (5) | 0.017 (4) | −0.002 (5) |
C16 | 0.059 (5) | 0.058 (5) | 0.068 (5) | 0.003 (4) | 0.007 (4) | 0.002 (4) |
Geometric parameters (Å, º) top
O1—C9 | 1.368 (9) | C4—H4 | 1.04 (8) |
O1—C1 | 1.377 (10) | C5—C6 | 1.397 (12) |
O2—C9 | 1.202 (10) | C5—H5 | 0.95 (9) |
O3—C10 | 1.366 (9) | C6—C7 | 1.408 (10) |
O3—C11 | 1.368 (9) | C7—C8 | 1.352 (11) |
N1—C10 | 1.301 (10) | C7—H7 | 0.98 (8) |
N1—N2 | 1.393 (10) | C8—C10 | 1.434 (10) |
N2—C11 | 1.302 (11) | C8—C9 | 1.462 (10) |
N3—C15 | 1.309 (12) | C11—C12 | 1.441 (10) |
N3—C14 | 1.331 (13) | C12—C16 | 1.378 (11) |
C1—C2 | 1.350 (11) | C12—C13 | 1.390 (11) |
C1—C6 | 1.409 (10) | C13—C14 | 1.388 (12) |
C2—C3 | 1.365 (12) | C13—H13 | 0.96 (8) |
C2—H2 | 0.83 (8) | C14—H14 | 1.09 (10) |
C3—C4 | 1.411 (13) | C15—C16 | 1.370 (13) |
C3—H3 | 1.07 (9) | C15—H15 | 0.96 (10) |
C4—C5 | 1.367 (12) | C16—H16 | 0.95 (8) |
| | | |
C9—O1—C1 | 123.9 (6) | C7—C8—C9 | 119.5 (6) |
C10—O3—C11 | 103.3 (6) | C10—C8—C9 | 120.9 (7) |
C10—N1—N2 | 107.5 (7) | O2—C9—O1 | 117.5 (7) |
C11—N2—N1 | 106.1 (7) | O2—C9—C8 | 126.1 (7) |
C15—N3—C14 | 115.7 (8) | O1—C9—C8 | 116.3 (7) |
C2—C1—O1 | 119.0 (7) | N1—C10—O3 | 111.1 (7) |
C2—C1—C6 | 121.1 (7) | N1—C10—C8 | 126.1 (7) |
O1—C1—C6 | 119.8 (6) | O3—C10—C8 | 122.7 (7) |
C1—C2—C3 | 121.0 (8) | N2—C11—O3 | 111.9 (7) |
C1—C2—H2 | 130 (6) | N2—C11—C12 | 127.9 (7) |
C3—C2—H2 | 109 (6) | O3—C11—C12 | 120.2 (6) |
C2—C3—C4 | 119.3 (8) | C16—C12—C13 | 118.2 (7) |
C2—C3—H3 | 123 (4) | C16—C12—C11 | 121.2 (8) |
C4—C3—H3 | 117 (4) | C13—C12—C11 | 120.6 (7) |
C5—C4—C3 | 120.0 (9) | C14—C13—C12 | 117.9 (8) |
C5—C4—H4 | 123 (5) | C14—C13—H13 | 123 (5) |
C3—C4—H4 | 117 (5) | C12—C13—H13 | 119 (5) |
C4—C5—C6 | 120.6 (8) | N3—C14—C13 | 124.2 (9) |
C4—C5—H5 | 124 (5) | N3—C14—H14 | 119 (5) |
C6—C5—H5 | 115 (5) | C13—C14—H14 | 117 (5) |
C5—C6—C7 | 124.9 (7) | N3—C15—C16 | 125.8 (9) |
C5—C6—C1 | 117.9 (6) | N3—C15—H15 | 107 (6) |
C7—C6—C1 | 117.2 (7) | C16—C15—H15 | 127 (6) |
C8—C7—C6 | 123.0 (7) | C15—C16—C12 | 118.1 (8) |
C8—C7—H7 | 119 (4) | C15—C16—H16 | 125 (5) |
C6—C7—H7 | 118 (4) | C12—C16—H16 | 116 (5) |
C7—C8—C10 | 119.5 (7) | | |
| | | |
C10—N1—N2—C11 | 1.3 (10) | N2—N1—C10—O3 | −1.8 (9) |
C9—O1—C1—C2 | 179.7 (7) | N2—N1—C10—C8 | 179.9 (7) |
C9—O1—C1—C6 | −1.3 (11) | C11—O3—C10—N1 | 1.6 (8) |
O1—C1—C2—C3 | 179.2 (7) | C11—O3—C10—C8 | 179.9 (7) |
C6—C1—C2—C3 | 0.2 (12) | C7—C8—C10—N1 | −6.9 (12) |
C1—C2—C3—C4 | −2.3 (12) | C9—C8—C10—N1 | 174.9 (8) |
C2—C3—C4—C5 | 3.1 (13) | C7—C8—C10—O3 | 175.0 (7) |
C3—C4—C5—C6 | −1.8 (13) | C9—C8—C10—O3 | −3.3 (12) |
C4—C5—C6—C7 | 179.1 (7) | N1—N2—C11—O3 | −0.3 (9) |
C4—C5—C6—C1 | −0.3 (12) | N1—N2—C11—C12 | −178.5 (7) |
C2—C1—C6—C5 | 1.1 (11) | C10—O3—C11—N2 | −0.7 (9) |
O1—C1—C6—C5 | −177.9 (7) | C10—O3—C11—C12 | 177.6 (7) |
C2—C1—C6—C7 | −178.3 (7) | N2—C11—C12—C16 | −170.9 (8) |
O1—C1—C6—C7 | 2.8 (11) | O3—C11—C12—C16 | 11.1 (11) |
C5—C6—C7—C8 | −179.1 (8) | N2—C11—C12—C13 | 7.4 (13) |
C1—C6—C7—C8 | 0.3 (11) | O3—C11—C12—C13 | −170.6 (7) |
C6—C7—C8—C10 | 177.1 (7) | C16—C12—C13—C14 | −0.6 (11) |
C6—C7—C8—C9 | −4.6 (11) | C11—C12—C13—C14 | −179.0 (8) |
C1—O1—C9—O2 | 178.2 (8) | C15—N3—C14—C13 | −0.9 (13) |
C1—O1—C9—C8 | −2.9 (10) | C12—C13—C14—N3 | 0.5 (13) |
C7—C8—C9—O2 | −175.4 (9) | C14—N3—C15—C16 | 1.5 (13) |
C10—C8—C9—O2 | 2.9 (13) | N3—C15—C16—C12 | −1.7 (14) |
C7—C8—C9—O1 | 5.8 (10) | C13—C12—C16—C15 | 1.1 (11) |
C10—C8—C9—O1 | −175.9 (7) | C11—C12—C16—C15 | 179.5 (7) |
3-[5-(Pyridin-4-yl)-1,3,4-oxadiazol-2-yl]-2
H-chromen-2-one (2B)
top
Crystal data top
C16H9N3O3 | Dx = 1.524 Mg m−3 |
Mr = 291.26 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pca21 | Cell parameters from 921 reflections |
a = 20.931 (2) Å | θ = 3.9–22.3° |
b = 3.7708 (5) Å | µ = 0.11 mm−1 |
c = 16.0887 (15) Å | T = 293 K |
V = 1269.8 (2) Å3 | Stick, colorless |
Z = 4 | 0.30 × 0.06 × 0.05 mm |
F(000) = 600 | |
Data collection top
Rigaku Xcalibur Sapphire3 diffractometer | 2162 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1539 reflections with I > 2σ(I) |
Detector resolution: 16.1827 pixels mm-1 | Rint = 0.083 |
ω scans | θmax = 25.0°, θmin = 3.2° |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2018) | h = −24→24 |
Tmin = 0.025, Tmax = 1.000 | k = −3→4 |
8304 measured reflections | l = −17→19 |
Refinement top
Refinement on F2 | Hydrogen site location: difference Fourier map |
Least-squares matrix: full | All H-atom parameters refined |
R[F2 > 2σ(F2)] = 0.057 | w = 1/[σ2(Fo2) + (0.049P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.133 | (Δ/σ)max < 0.001 |
S = 0.96 | Δρmax = 0.20 e Å−3 |
2162 reflections | Δρmin = −0.12 e Å−3 |
235 parameters | Absolute structure: Flack x determined using 482 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons et al., 2013) |
1 restraint | Absolute structure parameter: 0.6 (10) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.52761 (19) | 0.1729 (11) | 0.5149 (3) | 0.0588 (11) | |
O2 | 0.4531 (2) | 0.0329 (13) | 0.4247 (3) | 0.0752 (14) | |
O3 | 0.3275 (2) | 0.2135 (10) | 0.4532 (3) | 0.0546 (11) | |
N1 | 0.3075 (3) | 0.5030 (14) | 0.5690 (3) | 0.0631 (15) | |
N2 | 0.2503 (3) | 0.4623 (14) | 0.5262 (3) | 0.0667 (15) | |
N3 | 0.1352 (3) | −0.0167 (14) | 0.2676 (4) | 0.0658 (14) | |
C1 | 0.5473 (3) | 0.3023 (14) | 0.5910 (4) | 0.0521 (14) | |
C2 | 0.6114 (3) | 0.2930 (18) | 0.6082 (4) | 0.0575 (17) | |
H2 | 0.640 (4) | 0.223 (17) | 0.570 (5) | 0.08 (2)* | |
C3 | 0.6318 (3) | 0.4245 (17) | 0.6850 (5) | 0.0636 (18) | |
H3 | 0.678 (3) | 0.420 (15) | 0.691 (4) | 0.067 (18)* | |
C4 | 0.5889 (3) | 0.5519 (19) | 0.7419 (5) | 0.0639 (18) | |
H4 | 0.601 (3) | 0.627 (14) | 0.795 (4) | 0.060 (18)* | |
C5 | 0.5251 (3) | 0.5615 (18) | 0.7238 (4) | 0.0575 (17) | |
H5 | 0.495 (3) | 0.670 (14) | 0.760 (4) | 0.056 (17)* | |
C6 | 0.5029 (3) | 0.4417 (16) | 0.6475 (4) | 0.0511 (15) | |
C7 | 0.4372 (3) | 0.4472 (15) | 0.6225 (4) | 0.0506 (15) | |
H7 | 0.404 (3) | 0.577 (12) | 0.662 (3) | 0.042 (14)* | |
C8 | 0.4184 (3) | 0.3262 (15) | 0.5471 (4) | 0.0477 (14) | |
C9 | 0.4645 (3) | 0.1692 (16) | 0.4908 (4) | 0.0567 (16) | |
C10 | 0.3515 (3) | 0.3508 (15) | 0.5256 (4) | 0.0525 (14) | |
C11 | 0.2637 (3) | 0.2938 (15) | 0.4586 (4) | 0.0540 (15) | |
C12 | 0.2199 (3) | 0.1852 (14) | 0.3929 (4) | 0.0521 (15) | |
C13 | 0.1550 (3) | 0.2134 (16) | 0.4035 (4) | 0.0573 (16) | |
H13 | 0.138 (3) | 0.321 (13) | 0.451 (4) | 0.053 (16)* | |
C14 | 0.1147 (4) | 0.1129 (17) | 0.3402 (5) | 0.0653 (18) | |
H14 | 0.072 (3) | 0.111 (13) | 0.349 (4) | 0.047 (16)* | |
C15 | 0.1979 (3) | −0.0413 (18) | 0.2591 (5) | 0.0616 (17) | |
H15 | 0.211 (3) | −0.128 (17) | 0.206 (4) | 0.07 (2)* | |
C16 | 0.2419 (4) | 0.0482 (16) | 0.3185 (4) | 0.0579 (17) | |
H16 | 0.285 (3) | 0.038 (12) | 0.311 (3) | 0.040 (14)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.047 (3) | 0.087 (3) | 0.042 (3) | 0.0030 (19) | −0.001 (2) | −0.007 (2) |
O2 | 0.064 (3) | 0.117 (4) | 0.044 (3) | 0.004 (3) | −0.004 (2) | −0.020 (3) |
O3 | 0.051 (3) | 0.074 (2) | 0.039 (2) | 0.0008 (19) | −0.004 (2) | −0.006 (2) |
N1 | 0.048 (3) | 0.090 (4) | 0.052 (4) | 0.003 (3) | −0.001 (3) | −0.018 (3) |
N2 | 0.053 (3) | 0.098 (4) | 0.049 (4) | 0.005 (3) | 0.002 (3) | −0.014 (3) |
N3 | 0.065 (4) | 0.077 (3) | 0.055 (4) | −0.004 (3) | −0.009 (3) | −0.003 (3) |
C1 | 0.053 (4) | 0.061 (4) | 0.042 (4) | 0.003 (3) | −0.001 (3) | 0.001 (3) |
C2 | 0.046 (4) | 0.077 (4) | 0.050 (5) | 0.002 (3) | 0.005 (3) | 0.007 (3) |
C3 | 0.046 (4) | 0.082 (4) | 0.063 (5) | −0.003 (3) | −0.008 (4) | 0.011 (4) |
C4 | 0.066 (5) | 0.084 (5) | 0.042 (4) | −0.009 (3) | −0.010 (4) | −0.001 (3) |
C5 | 0.054 (4) | 0.068 (4) | 0.051 (4) | −0.002 (3) | 0.002 (3) | −0.005 (3) |
C6 | 0.049 (4) | 0.064 (4) | 0.041 (4) | −0.002 (3) | −0.002 (3) | 0.002 (3) |
C7 | 0.051 (4) | 0.058 (4) | 0.042 (4) | 0.000 (3) | 0.003 (3) | −0.001 (3) |
C8 | 0.045 (4) | 0.057 (3) | 0.041 (4) | 0.002 (2) | 0.000 (3) | −0.001 (2) |
C9 | 0.055 (4) | 0.069 (4) | 0.047 (4) | 0.000 (3) | 0.002 (3) | −0.002 (3) |
C10 | 0.055 (4) | 0.065 (3) | 0.038 (4) | −0.003 (3) | −0.002 (3) | −0.001 (3) |
C11 | 0.046 (4) | 0.071 (4) | 0.044 (4) | −0.002 (3) | −0.001 (3) | −0.004 (3) |
C12 | 0.056 (4) | 0.059 (3) | 0.041 (4) | −0.003 (3) | −0.007 (3) | 0.001 (3) |
C13 | 0.052 (4) | 0.070 (4) | 0.049 (4) | 0.000 (3) | 0.001 (4) | −0.005 (3) |
C14 | 0.051 (5) | 0.075 (5) | 0.070 (5) | −0.003 (3) | −0.009 (4) | −0.001 (3) |
C15 | 0.067 (5) | 0.074 (4) | 0.045 (4) | −0.003 (3) | −0.003 (4) | −0.004 (3) |
C16 | 0.048 (4) | 0.078 (4) | 0.048 (4) | −0.001 (3) | 0.005 (3) | −0.007 (3) |
Geometric parameters (Å, º) top
O1—C9 | 1.376 (7) | C4—H4 | 0.94 (6) |
O1—C1 | 1.381 (7) | C5—C6 | 1.389 (8) |
O2—C9 | 1.206 (8) | C5—H5 | 0.95 (6) |
O3—C10 | 1.370 (7) | C6—C7 | 1.433 (8) |
O3—C11 | 1.372 (7) | C7—C8 | 1.354 (8) |
N1—C10 | 1.290 (7) | C7—H7 | 1.05 (5) |
N1—N2 | 1.390 (7) | C8—C10 | 1.446 (8) |
N2—C11 | 1.290 (8) | C8—C9 | 1.450 (8) |
N3—C15 | 1.323 (8) | C11—C12 | 1.458 (8) |
N3—C14 | 1.337 (10) | C12—C13 | 1.374 (9) |
C1—C2 | 1.370 (8) | C12—C16 | 1.383 (9) |
C1—C6 | 1.402 (8) | C13—C14 | 1.375 (9) |
C2—C3 | 1.397 (10) | C13—H13 | 0.94 (6) |
C2—H2 | 0.91 (7) | C14—H14 | 0.90 (6) |
C3—C4 | 1.370 (10) | C15—C16 | 1.369 (9) |
C3—H3 | 0.97 (7) | C15—H15 | 0.95 (7) |
C4—C5 | 1.366 (9) | C16—H16 | 0.92 (5) |
| | | |
C9—O1—C1 | 122.7 (5) | C7—C8—C9 | 120.2 (6) |
C10—O3—C11 | 102.7 (5) | C10—C8—C9 | 121.4 (5) |
C10—N1—N2 | 107.3 (5) | O2—C9—O1 | 116.3 (6) |
C11—N2—N1 | 106.6 (5) | O2—C9—C8 | 126.4 (6) |
C15—N3—C14 | 115.7 (6) | O1—C9—C8 | 117.3 (5) |
C2—C1—O1 | 117.6 (6) | N1—C10—O3 | 111.5 (5) |
C2—C1—C6 | 121.8 (6) | N1—C10—C8 | 126.2 (6) |
O1—C1—C6 | 120.6 (5) | O3—C10—C8 | 122.3 (5) |
C1—C2—C3 | 117.9 (6) | N2—C11—O3 | 111.9 (5) |
C1—C2—H2 | 121 (5) | N2—C11—C12 | 127.8 (6) |
C3—C2—H2 | 120 (5) | O3—C11—C12 | 120.3 (5) |
C4—C3—C2 | 121.0 (6) | C13—C12—C16 | 117.8 (6) |
C4—C3—H3 | 126 (4) | C13—C12—C11 | 120.7 (6) |
C2—C3—H3 | 113 (4) | C16—C12—C11 | 121.6 (6) |
C5—C4—C3 | 120.5 (7) | C12—C13—C14 | 119.6 (7) |
C5—C4—H4 | 117 (4) | C12—C13—H13 | 121 (4) |
C3—C4—H4 | 122 (4) | C14—C13—H13 | 119 (4) |
C4—C5—C6 | 120.4 (7) | N3—C14—C13 | 123.4 (7) |
C4—C5—H5 | 122 (4) | N3—C14—H14 | 116 (4) |
C6—C5—H5 | 117 (4) | C13—C14—H14 | 120 (4) |
C5—C6—C1 | 118.2 (6) | N3—C15—C16 | 125.4 (7) |
C5—C6—C7 | 124.4 (6) | N3—C15—H15 | 114 (4) |
C1—C6—C7 | 117.4 (5) | C16—C15—H15 | 121 (4) |
C8—C7—C6 | 121.7 (6) | C15—C16—C12 | 118.1 (7) |
C8—C7—H7 | 120 (3) | C15—C16—H16 | 124 (3) |
C6—C7—H7 | 118 (3) | C12—C16—H16 | 118 (3) |
C7—C8—C10 | 118.3 (6) | | |
| | | |
C10—N1—N2—C11 | −1.3 (7) | N2—N1—C10—O3 | 1.5 (7) |
C9—O1—C1—C2 | −179.9 (5) | N2—N1—C10—C8 | −179.5 (6) |
C9—O1—C1—C6 | −0.7 (8) | C11—O3—C10—N1 | −1.2 (6) |
O1—C1—C2—C3 | 179.8 (5) | C11—O3—C10—C8 | 179.8 (5) |
C6—C1—C2—C3 | 0.7 (9) | C7—C8—C10—N1 | 5.6 (9) |
C1—C2—C3—C4 | 1.3 (9) | C9—C8—C10—N1 | −175.7 (6) |
C2—C3—C4—C5 | −1.7 (10) | C7—C8—C10—O3 | −175.5 (5) |
C3—C4—C5—C6 | 0.1 (10) | C9—C8—C10—O3 | 3.2 (9) |
C4—C5—C6—C1 | 1.8 (9) | N1—N2—C11—O3 | 0.6 (7) |
C4—C5—C6—C7 | −178.9 (6) | N1—N2—C11—C12 | 179.7 (6) |
C2—C1—C6—C5 | −2.2 (8) | C10—O3—C11—N2 | 0.3 (6) |
O1—C1—C6—C5 | 178.6 (5) | C10—O3—C11—C12 | −178.9 (5) |
C2—C1—C6—C7 | 178.4 (6) | N2—C11—C12—C13 | −9.5 (10) |
O1—C1—C6—C7 | −0.7 (8) | O3—C11—C12—C13 | 169.6 (5) |
C5—C6—C7—C8 | −179.9 (6) | N2—C11—C12—C16 | 171.1 (6) |
C1—C6—C7—C8 | −0.6 (9) | O3—C11—C12—C16 | −9.9 (9) |
C6—C7—C8—C10 | −178.2 (5) | C16—C12—C13—C14 | −1.3 (9) |
C6—C7—C8—C9 | 3.2 (9) | C11—C12—C13—C14 | 179.3 (6) |
C1—O1—C9—O2 | −176.4 (5) | C15—N3—C14—C13 | −0.6 (10) |
C1—O1—C9—C8 | 3.2 (8) | C12—C13—C14—N3 | 0.7 (10) |
C7—C8—C9—O2 | 175.1 (6) | C14—N3—C15—C16 | 1.2 (10) |
C10—C8—C9—O2 | −3.5 (10) | N3—C15—C16—C12 | −1.9 (10) |
C7—C8—C9—O1 | −4.4 (8) | C13—C12—C16—C15 | 1.8 (9) |
C10—C8—C9—O1 | 177.0 (5) | C11—C12—C16—C15 | −178.7 (5) |
Results of crystallization from different solvents and equimolar
two-component mixtures topSolvent | Crystal form | Structure |
Acetonitrile | Parallelepiped | 1A |
Acetone | Parallelepiped | 1A |
Chloroform | Stick-like | 1A |
Diethyl ether/acetonitrile | Stick-like | 1A |
Acetonitrile/acetone | Stick-like | 1B |
Tetrahydrofuran | Stick-like | 1C |
Isopropanol | Parallelepiped | 2A |
Pyridine | Stick-like | 2B |
Selected geometric parameters of molecules 1 and 2
in different polymorphic forms topParameter | Form 1A | Form 1B | Form 1C | Form 2A | Form 2B |
The accuracy of the molecular mean-square plane (Å) | | | | | |
| 0.05 | 0.07 | 0.08 | 0.07 | 0.07 |
| | | | | |
Bond lengths (Å) | | | | | |
C8—C10 | 1.437 (5) | 1.437 (7) | 1.457 (5) | 1.434 (9) | 1.445 (9) |
C11—C12 | 1.452 (5) | 1.457 (6) | 1.456 (5) | 1.441 (10) | 1.458 (9) |
Torsion angles (°) | | | | | |
C7—C8—C10—N1 | -5.1 (5) | -4.3 (6) | 5.9 (6) | -6.9 (12) | 5.6 (9) |
N2—C11—C12—C13 | 2.0 (6) | 7.9 (6) | -7.4 (6) | 7.5 (12) | -9.5 (9) |
| | | | | |
Intramolecular short contacts, ? | | | | | |
H7···N1 | 2.61 (4) | 2.58 (3) | 2.57 (3) | 2.55 (8) | 2.53 (6) |
H13···N2 | 2.65 (3) | 2.73 (3) | 2.69 (4) | 2.67 (8) | 2.70 (6) |
H17/H16···O3 | 2.42 (4) | 2.57 (3) | 2.59 (4) | 2.48 (8) | 2.54 (5) |
Geometric characteristics of the intermolecular hydrogen bonds and
stacking interactions in different polymorphic crystals of the
compounds 1 and 2 topInteraction | Symmetry operation | Geometric characteristics | |
| | H···A (Å) | D—H···A (°) |
Polymorph 1A | | | |
C5—H···N2 | -x+1, -y+1, -z+1 | 2.67 (4) | 140 (3) |
C16—H···O2 | -x+2, -y, -z+1 | 2.54 (4) | 133 (3) |
C11···C14 (π–π) | x, y+1, z | C11···C14 = 3.404 (6) | |
| | | |
Polymorph 1B | | | |
C5—H···N2 | -x+1, -y, -z+1 | 2.55 (4) | 152 (3) |
C7—H···N1 | -x+1, -y, -z+1 | 2.71 (3) | 157 (3) |
C17···C12 (π–π) | x, y-1, z | C17···C12 = 3.492 (5) | |
| | | |
Polymorph 1C | | | |
C5—H···N2 | -x+2, -y+1, -z+1 | 2.46 (4) | 159 (3) |
C7—H···N1 | -x+2, -y+1, -z+1 | 2.75 (4) | 172 (3) |
C12···C17 (π–π) | x+1, y, z | C12···C17 = 3.501 (5) | |
| | | |
Polymorph 2A | | | |
C7—H···N3 | x-1/2, -y+1, z+1/2 | 2.53 (7) | 160 (6) |
C2—H···N2 | x+1, y-1, z | 2.76 (8) | 161 (7) |
C15—H···N1 | x+1/2, -y+1, z-1/2 | 2.52 (10) | 167 (8) |
C8···C9 (π–π) | x-1, y, z | C8···C9 = 3.332 (10) | |
| | | |
Polymorph 2B | | | |
C7—H···N3 | -x+1/2, y+1, z+1/2 | 2.43 (5) | 158 (4) |
C2—H···N2 | x+1/2, -y+1, z | 2.69 (8) | 128 (6) |
C15—H···N1 | -x+1/2, y-1, z-1/2 | 2.64 (6) | 152 (5) |
C12···C16 (π–π) | x, y+1, z | C12···C16 = 3.498 (8) | |
Symmetry codes, interaction energies of the basic molecule with neighbouring
ones (Eint, kcal mol-1) with the highest values (more than 5% of
total interaction energy) and the contribution of this energy to the total
interaction energy (%) in polymorphic crystals of 1 (for full list of dimers
see Tables S1, S2 and S3) topDimer | Symmetry operation | Eint (kcal mol-1) | Contribution to the total interaction energy (%) | Type of interaction |
Polymorph 1A | | | | |
1A_1 | x, y+1, z | -16.10 | 21.0 | Stacking |
1A_2 | x, -y+1, z | -16.10 | 21.0 | Stacking |
1A_3 | -x+1, -y+1, -z+1 | -9.49 | 12.4 | C—H···N |
1A_4 | -x+1, -y+2, -z+1 | -7.00 | 9.1 | Nonspecific |
1A_5 | -x+2, -y, -z+1 | -5.28 | 6.9 | C—H···O |
| | | | |
Polymorph 1B | | | | |
1B_1 | x, y+1, z | -15.95 | 20.5 | Stacking |
1B_2 | x, -y+1, z | -15.95 | 20.5 | Stacking |
1B_3 | -x+1, -y+2, -z+1 | -10.50 | 13.5 | C—H···N |
1B_4 | -x+1, -y+1, -z+1 | -9.78 | 12.5 | Nonspecific |
1B_5 | -x+1/2, 1/2+y, -z+1/2 | -5.30 | 6.8 | Nonspecific |
1B_6 | -x+1/2, -1/2+y, -z+1/2 | -5.30 | 6.8 | Nonspecific |
1B_7 | -x+3/2, 1/2+y, -z+1/2 | -4.67 | 6.0 | Nonspecific |
1B_8 | -x+3/2, -1/2+y, -z+1/2 | -4.67 | 6.0 | Nonspecific |
| | | | |
Polymorph 1C | | | | |
1C_1 | x+1, y, z | -15.76 | 20.2 | Stacking |
1C_2 | x-1, y, z | -15.76 | 20.2 | Stacking |
1C_3 | -x+2, -y+1, -z+1 | -10.02 | 12.8 | C—H···N |
1C_4 | -x+1, -y+1, -z+1 | -10.01 | 12.8 | Nonspecific |
1C_5 | -x+3/2, y+1/2, -z+3/2 | -4.25 | 5.4 | C—H···O |
1C_6 | -x+3/2, y-1/2, -z+3/2 | -4.25 | 5.4 | C—H···O |
Symmetry codes, interaction energies of the basic molecule with neighbouring
ones (Eint, kcal mol-1) with the highest values (more than 5% of
total interaction energy) and the contribution of this energy to the total
interaction energy (%) in polymorphic crystals of 2 (for full list of dimers
see Tables S4 and S5 in the supporting information) topDimer | Symmetry operation | Eint (kcal mol-1) | Contribution to the total interaction energy (%) | Type of interaction |
Polymorph 2A | | | | |
2A_1 | x+1, y, z | -16.04 | 19.7 | Stacking |
2A_2 | x-1, y, z | -16.04 | 19.7 | Stacking |
2A_3 | x+1/2, -y+1, z-1/2 | -5.51 | 6.8 | C—H···N |
2A_4 | x-1/2, -y+1, z+1/2 | -5.51 | 6.8 | C—H···N |
2A_5 | x+1, y+1, z | -5.06 | 6.2 | C—H···N |
2A_6 | x-1, y-1, z | -5.06 | 6.2 | C—H···N |
2A_7 | x+1/2, -y, z-1/2 | -4.12 | 5.1 | Nonspecific |
2A_8 | x-1/2, -y, z+1/2 | -4.12 | 5.1 | Nonspecific |
| | | | |
Polymorph 2B | | | | |
2B_1 | x, y+1, z | -15.91 | 19.3 | Stacking |
2B_2 | x, y-1, z | -15.91 | 19.3 | Stacking |
2B_3 | -x+3/2, y+1, z+1/2 | -5.44 | 6.6 | C—H···N |
2B_4 | -x+3/2, y-1, z-1/2 | -5.44 | 6.6 | C—H···N |
2B_5 | -x+1, -y+1, z+1/2 | -4.63 | 5.6 | Nonspecific |
2B_6 | -x+1, -y+1, z-1/2 | -4.63 | 5.6 | Nonspecific |
2B_7 | -x+3/2, y, z+1/2 | -4.47 | 5.4 | Nonspecific |
2B_8 | -x+3/2, y, z-1/2 | -4.47 | 5.4 | Nonspecific |
2B_9 | x+1/2, -y+1, z | -4.20 | 5.1 | C—H···π |
2B_10 | -x-1/2, -y+1, z | -4.20 | 5.1 | C—H···π |