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The organic acid–base complex 1,1,3,3-tetra­methyl­guanidinium 4-methyl­benzene­sulfonate, C5H14N3+·C7H7O3S, was obtained from the corresponding 1,1,3,3-tetra­methyl­guani­din­ium 4-methyl­benzene­sulfinate complex, C5H14N3+·C7H7O2S, by solid-state oxidation in air. Comparison of the two crystal structures reveals similar packing arrangements in the monoclinic space group P21/c, with centrosymmetric 2:2 tetra­mers being connected by four strong N—H...O=S hydrogen bonds between the imine N atoms of two 1,1,3,3-tetra­methyl­guanidinium bases and the O atoms of two acid mol­ecules.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270113015011/eg3125sup1.cif
Contains datablocks I, II, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270113015011/eg3125Isup2.hkl
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270113015011/eg3125IIsup3.hkl
Contains datablock II

cml

Chemical Markup Language (CML) file https://doi.org/10.1107/S0108270113015011/eg3125IIsup4.cml
Supplementary material

CCDC references: 957029; 957030

Comment top

The complex formed between 1,1,3,3-tetramethylguanidinium and 4-methylbenzenesulfinate, (I), was investigated in order to provide information relevant to the mechanistic proposal for the reaction of ditosylhydrazine with an α-bromoacetamide, in the presence of a base, which produces an α-diazoacetamide. In the original publication (Toma et al. 2007) concerning the preparation of α-diazoesters, the authors proposed that two molecules of p-toluenesulfinate are produced as the diazo group is installed on the α C atom. The obtained crystal structure (Fig. 1a) thus supports this element in their mechanistic proposal.

The structure of the corresponding sulfonate, (II), shown in Fig. 1(b), was determined to support the identification of the second counterion observed in mass spectrometry (ESI/TOF-) and 1H NMR of (I), after being exposed to air, as p-toluenesulfonate. For an additional report mentioning the facile oxidation of p-toluenesulfinates, see Whitmore & Hamilton (1922).

The structures of (I) and (II) are very similar with respect to both molecular geometry and crystal packing (Fig. 2). Both form characteristic 2:2 tetramers, giving rise to second-level R44(12) ring motifs [for graph-set notation, see Etter et al. (1990) and Bernstein et al. (1995)]. The tables of crystallographic data reveal increases in the lengths of the b and c axes significant enough to result in a decrease in density upon oxidation from 1.277 Mg m-3 for (I) to 1.270 Mg m-3 for (II) [data for (II) were collected at room temperature due to a temporary malfunction of the low-temperature device, a factor also contributing to a lower density than for (I)]. On a detailed level, there are also small voids in the structure of (II) that are not indicated in the structure of (I) (Fig. 2). Accordingly, the manner in which oxygen can penetrate the crystal structure of (I) to yield (II) in a solid-state oxidation is unclear.

In the Cambridge Structural Database (CSD, Version 5.34 of November 2012; Allen 2002) there are 18 structures containing the 1,1,3,3-tetramethylguanidinium cation, of which seven form 2:2 cyclic adducts as shown in Fig. 3. In the structures of (I) and (II), each acceptor atom is involved in only a single strong hydrogen bond, but there are also cases of twofold acceptors, as seen for the dihydrogenphosphate salt in Fig. 3(a) (Criado et al., 2000), where the graph set is R44(8) rather than R44(12). The ring system may, as for (I) and (II), have a central centre of symmetry, giving essentially coplanar guanidinium cations, or they may be folded, as seen in Fig. 3(b) for the complex with propanoic acid (King et al., 2011).

The 4-methylbenzenesulfinate (I), or p-toluenesulfinate, occurs in only two previous entries in the CSD (Thirupathi et al., 2003; Betz & Gerber, 2011). Two further structures have 4-nitro in place of 4-methyl substituents (Nakazawa et al., 2011; Brito et al., 2006), while the parent benzenesulfinate accounts for a single entry (McDonald et al., 2010). One of the nitro-substituted structures (Brito et al., 2006) forms a hydrogen-bonded ring system related to (I) (Fig. 3c). In contrast with the sulfinate, the 4-methylbenzenesulfonate is quite a common anion in the CSD, with close to 600 structures reported to date, of which 310 are classified as `organic' (i.e. not `metallo-organic'). In the latter group, 55 structures contain R44(12) ring motifs with N donors. Most of them have charged amino groups as donors; Fig. 3(d) shows one of the few occurrences of an Nsp2 atom as donor (Blaton et al., 1995).

Related literature top

For related literature, see: Allen (2002); American (2008); Bernstein et al. (1995); Betz & Gerber (2011); Blaton et al. (1995); Brito et al. (2006); Criado et al. (2000); Etter et al. (1990); Kaupang (2010); King et al. (2011); McDonald et al. (2010); Nakazawa et al. (2011); Thirupathi et al. (2003); Toma et al. (2007); Vilas & Tojo (2010); Whitmore & Hamilton (1922).

Experimental top

Acid–base complex (I) precipitated from the reaction mixture (in tetrahydrofuran, THF) during the transformation of an α-bromoacetamide into an α-diazoacetamide, using the reagent ditosylhydrazine and the base 1,1,3,3-tetramethylguanidine, a reaction that generates 2 molar equivalents of p-toluenesulfinate (Kaupang, 2010; Toma et al., 2007). The complex is soluble in dichloromethane, acetonitrile, methanol and water, poorly soluble in THF, and nearly insoluble in diethyl ether. No previous reports of this complex were found in the Chemical Abstracts Service (CAS; American Chemical Society, 2008).

Complex (II) was obtained by oxidation of (I) in air over a period of approximately 72 h, after which time the resulting powder was submitted to crystallization. For a previously reported synthesis of (II), see Vilas & Tojo (2010). A saturated solution of freshly precipitated (I) in acetonitrile was placed in a beaker, which was covered with Parafilm and stored in the dark at 277 K (refrigerator) for a period of approximately 12 h, during which time multiple clusters of thick colourless needles appeared. A sample of complex (I), as it precipitated from the above-mentioned reaction (colourless powder), was exposed to air for a period of approximately 72 h. A solution of the resulting powder (4.8 mg) in anhydrous dichloromethane (500 µl) was placed in a 2.5 ml vial, which was then capped and a pinhole (0.3 mm) made in the cap to allow for vapour diffusion. This vial was placed inside a 25 ml vial containing diethyl ether (5 ml), which was subsequently capped and stored in the dark at ambient temperature for approximately 48 h, affording thin colourless needles of (II).

Refinement top

During refinement of (II), it became clear that atom O1 had an occupancy less than unity. This meant that (II) is actually a solid-state mixture between the oxidized sulfonate [occupancy 0.816 (12)] and the original reduced sulfinate form [occupancy 0.184 (12)]. No special measures were needed to account for this fact during normal anisotropic refinement. Positional parameters were refined for H atoms of the tetramethylguanidinium NH2 group. Other H atoms were introduced at theoretical positions, with C—H = 0.95/0.93 (aromatic) or 0.98/0.96 (methyl) Å for (I)/(II) and with free refinement of methyl-group rotation. Uiso(H) = 1.2Ueq of the carrier atom or 1.5Ueq for methyl groups.

Computing details top

For both compounds, data collection: APEX2 (Bruker, 2007); cell refinement: SAINT-Plus (Bruker, 2007); data reduction: SAINT-Plus (Bruker, 2007); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. The asymmetric units of (a) (I) and (b) (II), showing the atom-numbering schemes. Displacement ellipsoids, drawn at the 50% probability level, reflect the data-collection temperatures of 105 and 293 K, respectively. Dashed lines indicate hydrogen bonds [Added text OK?]. Only the major component (the sulfonate) is shown for (II).
[Figure 2] Fig. 2. Crystal packing arrangements for (a) (I) and (b) (II). H atoms not involved in hydrogen bonds (indicated as dashed lines) have been omitted for clarity. The large shape in (b) represents a small void, calculated by Mercury (Macrae et al., 2008) using a 0.9 Å probe radius and 0.5 Å grid spacing. In (I), there are three ππ interactions with (C–)H···C distances in the range 2.80–2.86 Å. The corresponding distances in (II) are slightly longer and cover the range 2.86–3.06 Å. Only the major component (the sulfonate) is shown for (II).
[Figure 3] Fig. 3. Second-level R22(12) or R22(12) hydrogen-bond motifs in (a) 1,1,3,3-tetramethylguanidinium dihydrogenorthophosphate (Criado et al., 2000), (b) 1,1,3,3-tetramethylguanidinium propionate (King et al., 2011), (c) dicyclohexylammonium 4-nitrophenylsulfinate (Brito et al., 2006) and (d) N-[2-(3-methoxyphenoxy)propyl]-m-tolylacetamidinium p-toluenesulfonate monohydrate (Blaton et al., 1995). In (d) the water molcule has been omitted, while substituted phenyl rings are shown as small spheres for clarity. The small circles in (a), (c) and (d) indicate crystallographic inversion centres.
(I) 1,1,3,3-Tetramethylguanidinium 4-methylbenzenesulfinate top
Crystal data top
C5H14N3+·C7H7O2SF(000) = 584
Mr = 271.38Dx = 1.277 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7132 reflections
a = 11.0959 (8) Åθ = 2.2–28.2°
b = 7.4038 (5) ŵ = 0.23 mm1
c = 17.1944 (13) ÅT = 105 K
β = 92.115 (1)°Needle, colourless
V = 1411.59 (18) Å30.6 × 0.4 × 0.3 mm
Z = 4
Data collection top
Bruker APEXII CCD area-detector
diffractometer
3375 independent reflections
Radiation source: fine-focus sealed tube3026 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.017
Detector resolution: 8.3 pixels mm-1θmax = 28.3°, θmin = 1.8°
Sets of exposures each taken over 0.5° ω rotation scansh = 1414
Absorption correction: multi-scan
(SADABS; Bruker, 2007)
k = 99
Tmin = 0.857, Tmax = 0.934l = 2022
11987 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.085H atoms treated by a mixture of independent and constrained refinement
S = 1.05 w = 1/[σ2(Fo2) + (0.044P)2 + 0.5937P]
where P = (Fo2 + 2Fc2)/3
3375 reflections(Δ/σ)max < 0.001
174 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = 0.25 e Å3
Crystal data top
C5H14N3+·C7H7O2SV = 1411.59 (18) Å3
Mr = 271.38Z = 4
Monoclinic, P21/cMo Kα radiation
a = 11.0959 (8) ŵ = 0.23 mm1
b = 7.4038 (5) ÅT = 105 K
c = 17.1944 (13) Å0.6 × 0.4 × 0.3 mm
β = 92.115 (1)°
Data collection top
Bruker APEXII CCD area-detector
diffractometer
3375 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2007)
3026 reflections with I > 2σ(I)
Tmin = 0.857, Tmax = 0.934Rint = 0.017
11987 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0300 restraints
wR(F2) = 0.085H atoms treated by a mixture of independent and constrained refinement
S = 1.05Δρmax = 0.45 e Å3
3375 reflectionsΔρmin = 0.25 e Å3
174 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
S10.30075 (2)0.51868 (4)0.394666 (15)0.01692 (9)
O10.37108 (8)0.68587 (13)0.37629 (6)0.0304 (2)
O20.28844 (7)0.49282 (11)0.48104 (5)0.02002 (18)
N10.40988 (9)0.19986 (14)0.55558 (6)0.0195 (2)
H110.4796 (14)0.227 (2)0.5750 (9)0.023*
H120.3712 (14)0.282 (2)0.5295 (9)0.023*
N20.39917 (8)0.06040 (13)0.63074 (6)0.0177 (2)
N30.25970 (9)0.01043 (13)0.52913 (6)0.0196 (2)
C10.35733 (10)0.04483 (15)0.57169 (6)0.0166 (2)
C20.47598 (10)0.01253 (16)0.69412 (7)0.0194 (2)
H210.56080.00740.68270.027 (4)*
H220.45760.04850.74290.025 (4)*
H230.46100.14230.69930.024 (4)*
C30.39775 (11)0.25785 (16)0.62565 (7)0.0223 (2)
H310.36360.29460.57470.033*
H320.34840.30710.66670.033*
H330.48030.30400.63210.033*
C40.16244 (11)0.11332 (18)0.56260 (8)0.0258 (3)
H410.15670.23210.53760.039*
H420.08610.04830.55420.039*
H430.17910.12880.61860.039*
C50.23347 (12)0.05848 (17)0.45081 (7)0.0254 (3)
H510.20050.03900.41790.038*
H520.30790.10410.42890.038*
H530.17450.15670.45310.038*
C60.14936 (9)0.58534 (15)0.36374 (6)0.0153 (2)
C70.13042 (10)0.68386 (16)0.29538 (7)0.0195 (2)
H710.19730.72370.26700.023*
C80.05119 (10)0.53005 (15)0.40548 (6)0.0162 (2)
H810.06370.46240.45200.019*
C90.01368 (10)0.72398 (16)0.26864 (7)0.0210 (2)
H910.00140.78990.22160.025*
C100.06587 (10)0.57360 (15)0.37931 (6)0.0171 (2)
H1010.13250.53820.40900.021*
C110.08581 (10)0.66839 (15)0.31013 (7)0.0175 (2)
C120.21214 (10)0.70739 (19)0.27933 (7)0.0256 (3)
H1210.27030.66110.31590.038*
H1220.22540.64830.22870.038*
H1230.22280.83810.27330.038*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
S10.01412 (14)0.01972 (15)0.01683 (15)0.00025 (9)0.00092 (10)0.00090 (10)
O10.0198 (4)0.0338 (5)0.0372 (5)0.0098 (4)0.0060 (4)0.0139 (4)
O20.0216 (4)0.0222 (4)0.0159 (4)0.0018 (3)0.0034 (3)0.0012 (3)
N10.0182 (4)0.0194 (5)0.0206 (5)0.0018 (4)0.0041 (4)0.0035 (4)
N20.0201 (4)0.0153 (4)0.0175 (5)0.0000 (3)0.0030 (4)0.0006 (4)
N30.0213 (5)0.0190 (5)0.0182 (5)0.0032 (4)0.0044 (4)0.0015 (4)
C10.0167 (5)0.0175 (5)0.0156 (5)0.0015 (4)0.0005 (4)0.0015 (4)
C20.0194 (5)0.0220 (6)0.0167 (5)0.0003 (4)0.0037 (4)0.0012 (4)
C30.0280 (6)0.0159 (5)0.0227 (6)0.0023 (4)0.0011 (5)0.0007 (4)
C40.0224 (6)0.0252 (6)0.0295 (6)0.0069 (5)0.0041 (5)0.0030 (5)
C50.0344 (6)0.0212 (6)0.0198 (6)0.0033 (5)0.0104 (5)0.0014 (5)
C60.0150 (5)0.0153 (5)0.0153 (5)0.0006 (4)0.0017 (4)0.0015 (4)
C70.0185 (5)0.0218 (5)0.0184 (5)0.0026 (4)0.0021 (4)0.0039 (4)
C80.0188 (5)0.0175 (5)0.0124 (5)0.0002 (4)0.0001 (4)0.0009 (4)
C90.0229 (5)0.0226 (6)0.0175 (5)0.0007 (4)0.0011 (4)0.0065 (4)
C100.0163 (5)0.0190 (5)0.0161 (5)0.0005 (4)0.0018 (4)0.0006 (4)
C110.0175 (5)0.0173 (5)0.0176 (5)0.0016 (4)0.0010 (4)0.0002 (4)
C120.0184 (5)0.0334 (7)0.0248 (6)0.0041 (5)0.0023 (4)0.0053 (5)
Geometric parameters (Å, º) top
S1—O11.5031 (9)C4—H420.9800
S1—O21.5085 (9)C4—H430.9800
S1—C61.8116 (11)C5—H510.9800
N1—C11.3215 (15)C5—H520.9800
N1—H110.856 (16)C5—H530.9800
N1—H120.862 (16)C6—C81.3882 (15)
N2—C11.3486 (14)C6—C71.3926 (15)
N2—C31.4645 (15)C7—C91.3906 (16)
N2—C21.4618 (14)C7—H710.9500
N3—C11.3483 (14)C8—C101.3966 (15)
N3—C41.4567 (15)C8—H810.9500
N3—C51.4594 (15)C9—C111.3983 (16)
C2—H210.9800C9—H910.9500
C2—H220.9800C10—C111.3916 (16)
C2—H230.9800C10—H1010.9500
C3—H310.9800C11—C121.5080 (15)
C3—H320.9800C12—H1210.9800
C3—H330.9800C12—H1220.9800
C4—H410.9800C12—H1230.9800
O1—S1—O2112.21 (5)H42—C4—H43109.5
O1—S1—C6101.36 (5)N3—C5—H51109.5
O2—S1—C6101.94 (5)N3—C5—H52109.5
C1—N1—H11121.6 (10)H51—C5—H52109.5
C1—N1—H12120.6 (10)N3—C5—H53109.5
H11—N1—H12117.4 (14)H51—C5—H53109.5
C1—N2—C3121.93 (10)H52—C5—H53109.5
C1—N2—C2121.53 (10)C8—C6—C7119.60 (10)
C3—N2—C2114.71 (9)C8—C6—S1120.31 (8)
C1—N3—C4122.43 (10)C7—C6—S1119.99 (8)
C1—N3—C5121.58 (10)C6—C7—C9120.04 (10)
C4—N3—C5114.96 (10)C6—C7—H71120.0
N1—C1—N2121.16 (10)C9—C7—H71120.0
N1—C1—N3120.11 (10)C6—C8—C10120.23 (10)
N2—C1—N3118.74 (10)C6—C8—H81119.9
N2—C2—H21109.5C10—C8—H81119.9
N2—C2—H22109.5C11—C9—C7120.78 (10)
H21—C2—H22109.5C11—C9—H91119.6
N2—C2—H23109.5C7—C9—H91119.6
H21—C2—H23109.5C11—C10—C8120.56 (10)
H22—C2—H23109.5C11—C10—H101119.7
N2—C3—H31109.5C8—C10—H101119.7
N2—C3—H32109.5C10—C11—C9118.75 (10)
H31—C3—H32109.5C10—C11—C12120.87 (10)
N2—C3—H33109.5C9—C11—C12120.37 (10)
H31—C3—H33109.5C11—C12—H121109.5
H32—C3—H33109.5C11—C12—H122109.5
N3—C4—H41109.5H121—C12—H122109.5
N3—C4—H42109.5C11—C12—H123109.5
H41—C4—H42109.5H121—C12—H123109.5
N3—C4—H43109.5H122—C12—H123109.5
H41—C4—H43109.5
C3—N2—C1—N1143.62 (11)O2—S1—C6—C7156.58 (9)
C2—N2—C1—N120.17 (17)C8—C6—C7—C90.98 (17)
C3—N2—C1—N336.74 (16)S1—C6—C7—C9175.39 (9)
C2—N2—C1—N3159.47 (10)C7—C6—C8—C100.28 (17)
C4—N3—C1—N1146.26 (11)S1—C6—C8—C10176.65 (8)
C5—N3—C1—N121.57 (17)C6—C7—C9—C110.78 (18)
C4—N3—C1—N233.39 (16)C6—C8—C10—C111.78 (17)
C5—N3—C1—N2158.79 (11)C8—C10—C11—C91.96 (17)
O1—S1—C6—C8142.95 (9)C8—C10—C11—C12176.76 (11)
O2—S1—C6—C827.07 (10)C7—C9—C11—C100.69 (18)
O1—S1—C6—C740.70 (10)C7—C9—C11—C12178.04 (11)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H11···O1i0.856 (16)1.938 (16)2.7902 (13)173.4 (15)
N1—H12···O20.862 (16)1.977 (16)2.8347 (13)172.5 (14)
Symmetry code: (i) x+1, y+1, z+1.
(II) 1,1,3,3-Tetramethylguanidinium 4-methylbenzenesulfonate top
Crystal data top
C5H14N3+·C7H7O2.82SF(000) = 610.1
Mr = 284.44Dx = 1.270 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2504 reflections
a = 11.185 (3) Åθ = 2.3–24.7°
b = 7.648 (2) ŵ = 0.23 mm1
c = 17.415 (5) ÅT = 296 K
β = 93.169 (4)°Needle, colourless
V = 1487.5 (8) Å30.8 × 0.3 × 0.2 mm
Z = 4
Data collection top
Bruker APEXII CCD area-detector
diffractometer
2615 independent reflections
Radiation source: fine-focus sealed tube1587 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
Detector resolution: 8.3 pixels mm-1θmax = 25.0°, θmin = 1.8°
Sets of exposures each taken over 0.5° ω rotation scansh = 1313
Absorption correction: multi-scan
(SADABS; Bruker, 2007)
k = 99
Tmin = 0.710, Tmax = 0.956l = 2020
10043 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.155H atoms treated by a mixture of independent and constrained refinement
S = 1.08 w = 1/[σ2(Fo2) + (0.0241P)2 + 2.8813P]
where P = (Fo2 + 2Fc2)/3
2615 reflections(Δ/σ)max < 0.001
187 parametersΔρmax = 0.33 e Å3
0 restraintsΔρmin = 0.38 e Å3
Crystal data top
C5H14N3+·C7H7O2.82SV = 1487.5 (8) Å3
Mr = 284.44Z = 4
Monoclinic, P21/cMo Kα radiation
a = 11.185 (3) ŵ = 0.23 mm1
b = 7.648 (2) ÅT = 296 K
c = 17.415 (5) Å0.8 × 0.3 × 0.2 mm
β = 93.169 (4)°
Data collection top
Bruker APEXII CCD area-detector
diffractometer
2615 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2007)
1587 reflections with I > 2σ(I)
Tmin = 0.710, Tmax = 0.956Rint = 0.045
10043 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0630 restraints
wR(F2) = 0.155H atoms treated by a mixture of independent and constrained refinement
S = 1.08Δρmax = 0.33 e Å3
2615 reflectionsΔρmin = 0.38 e Å3
187 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
S10.29495 (10)0.56175 (19)0.40703 (8)0.0653 (4)
O10.3460 (4)0.4551 (9)0.3592 (3)0.142 (3)0.816 (12)
O20.3510 (3)0.7310 (5)0.4107 (3)0.1321 (19)
O30.2812 (3)0.4933 (4)0.48344 (18)0.0768 (10)
N10.4054 (3)0.1976 (6)0.5527 (2)0.0648 (11)
H110.370 (4)0.274 (6)0.531 (3)0.078*
H120.483 (4)0.215 (6)0.571 (2)0.078*
N20.3989 (3)0.0456 (5)0.62949 (19)0.0543 (9)
N30.2466 (3)0.0096 (5)0.5376 (2)0.0606 (10)
C90.0649 (4)0.5739 (6)0.3758 (2)0.0580 (12)
H910.12950.53350.40220.070*
C110.0499 (3)0.5440 (6)0.4053 (2)0.0536 (11)
H1110.06180.48200.45110.064*
C10.3513 (3)0.0534 (6)0.5729 (2)0.0500 (10)
C120.1465 (3)0.6038 (5)0.3686 (2)0.0464 (10)
C70.0852 (4)0.6621 (6)0.3081 (2)0.0546 (11)
C100.1274 (4)0.6953 (6)0.3016 (3)0.0661 (13)
H1010.19200.73860.27620.079*
C50.4852 (4)0.0232 (8)0.6870 (3)0.0744 (15)
H510.47380.03190.73560.11 (2)*
H520.47420.14710.69180.091 (18)*
H530.56480.00010.67180.12 (2)*
C30.2110 (5)0.0756 (7)0.4608 (3)0.0843 (17)
H310.17040.01510.43150.126*
H320.28080.11130.43530.126*
H330.15830.17370.46520.126*
C60.2104 (4)0.6907 (8)0.2732 (3)0.0868 (17)
H610.22600.81390.26910.130*
H620.26730.63770.30540.130*
H630.21740.63870.22300.130*
C20.1546 (4)0.0843 (7)0.5762 (3)0.0931 (18)
H210.14680.20010.55530.140*
H220.07970.02370.56850.140*
H230.17620.09110.63020.140*
C80.0122 (4)0.7232 (7)0.2719 (3)0.0698 (14)
H810.00030.78510.22610.084*
C40.3906 (4)0.2361 (6)0.6268 (3)0.0763 (15)
H410.35090.27130.57900.114*
H420.34580.27670.66870.114*
H430.46960.28540.63090.114*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
S10.0446 (6)0.0761 (9)0.0743 (9)0.0034 (7)0.0040 (5)0.0091 (7)
O10.080 (4)0.209 (7)0.135 (5)0.063 (4)0.022 (3)0.074 (5)
O20.063 (2)0.098 (3)0.229 (5)0.038 (2)0.049 (3)0.067 (3)
O30.068 (2)0.085 (2)0.075 (2)0.0006 (18)0.0194 (17)0.0229 (19)
N10.048 (2)0.064 (3)0.081 (3)0.009 (2)0.011 (2)0.021 (2)
N20.051 (2)0.055 (2)0.056 (2)0.0026 (18)0.0045 (16)0.0063 (19)
N30.056 (2)0.058 (2)0.066 (2)0.0085 (18)0.0147 (18)0.0075 (19)
C90.046 (2)0.068 (3)0.061 (3)0.000 (2)0.007 (2)0.007 (2)
C110.052 (2)0.067 (3)0.042 (2)0.001 (2)0.0024 (19)0.014 (2)
C10.041 (2)0.050 (3)0.058 (3)0.003 (2)0.0030 (19)0.002 (2)
C120.043 (2)0.046 (2)0.050 (2)0.0041 (19)0.0008 (18)0.002 (2)
C70.056 (3)0.051 (3)0.056 (3)0.006 (2)0.004 (2)0.003 (2)
C100.058 (3)0.080 (3)0.060 (3)0.006 (3)0.006 (2)0.023 (3)
C50.063 (3)0.089 (5)0.069 (3)0.001 (3)0.018 (3)0.009 (3)
C30.096 (4)0.064 (3)0.087 (4)0.012 (3)0.046 (3)0.013 (3)
C60.064 (3)0.099 (4)0.094 (4)0.017 (3)0.022 (3)0.004 (3)
C20.059 (3)0.090 (4)0.129 (5)0.022 (3)0.005 (3)0.018 (4)
C80.071 (3)0.077 (4)0.061 (3)0.002 (3)0.005 (3)0.025 (3)
C40.090 (4)0.059 (3)0.080 (4)0.012 (3)0.000 (3)0.011 (3)
Geometric parameters (Å, º) top
S1—O11.318 (5)C7—C81.372 (6)
S1—O21.438 (4)C7—C61.511 (6)
S1—O31.446 (3)C10—C81.378 (6)
S1—O31.446 (3)C10—H1010.9300
S1—C121.785 (4)C5—H510.9600
N1—C11.315 (5)C5—H520.9600
N1—H110.79 (5)C5—H530.9600
N1—H120.92 (5)C3—H310.9600
N2—C11.330 (5)C3—H320.9600
N2—C51.452 (5)C3—H330.9600
N2—C41.460 (6)C6—H610.9600
N3—C11.335 (5)C6—H620.9600
N3—C21.450 (6)C6—H630.9600
N3—C31.464 (5)C2—H210.9600
C9—C71.365 (6)C2—H220.9600
C9—C111.376 (5)C2—H230.9600
C9—H910.9300C8—H810.9300
C11—C121.365 (5)C4—H410.9600
C11—H1110.9300C4—H420.9600
C12—C101.367 (5)C4—H430.9600
O1—S1—O2112.5 (4)N2—C5—H51109.5
O1—S1—O3115.4 (3)N2—C5—H52109.5
O2—S1—O3110.7 (3)H51—C5—H52109.5
O1—S1—C12107.5 (3)N2—C5—H53109.5
O2—S1—C12104.4 (2)H51—C5—H53109.5
O3—S1—C12105.42 (19)H52—C5—H53109.5
O3—S1—C12105.42 (19)N3—C3—H31109.5
C1—N1—H11122 (4)N3—C3—H32109.5
C1—N1—H12118 (3)H31—C3—H32109.5
H11—N1—H12120 (5)N3—C3—H33109.5
C1—N2—C5121.9 (4)H31—C3—H33109.5
C1—N2—C4121.5 (4)H32—C3—H33109.5
C5—N2—C4115.0 (4)C7—C6—H61109.5
C1—N3—C2122.6 (4)C7—C6—H62109.5
C1—N3—C3121.4 (4)H61—C6—H62109.5
C2—N3—C3115.4 (4)C7—C6—H63109.5
C7—C9—C11120.8 (4)H61—C6—H63109.5
C7—C9—H91119.6H62—C6—H63109.5
C11—C9—H91119.6N3—C2—H21109.5
C12—C11—C9121.0 (4)N3—C2—H22109.5
C12—C11—H111119.5H21—C2—H22109.5
C9—C11—H111119.5N3—C2—H23109.5
N1—C1—N2120.3 (4)H21—C2—H23109.5
N1—C1—N3119.5 (4)H22—C2—H23109.5
N2—C1—N3120.2 (4)C7—C8—C10121.6 (4)
C11—C12—C10118.8 (4)C7—C8—H81119.2
C11—C12—S1120.5 (3)C10—C8—H81119.2
C10—C12—S1120.7 (3)N2—C4—H41109.5
C9—C7—C8117.8 (4)N2—C4—H42109.5
C9—C7—C6121.7 (4)H41—C4—H42109.5
C8—C7—C6120.5 (4)N2—C4—H43109.5
C12—C10—C8120.0 (4)H41—C4—H43109.5
C12—C10—H101120.0H42—C4—H43109.5
C8—C10—H101120.0
C7—C9—C11—C121.0 (7)O3—S1—C12—C1110.9 (4)
C5—N2—C1—N120.9 (6)O3—S1—C12—C1110.9 (4)
C4—N2—C1—N1143.7 (5)O1—S1—C12—C1066.7 (5)
C5—N2—C1—N3157.2 (4)O2—S1—C12—C1052.9 (4)
C4—N2—C1—N338.1 (6)O3—S1—C12—C10169.6 (4)
C2—N3—C1—N1148.1 (5)O3—S1—C12—C10169.6 (4)
C3—N3—C1—N122.9 (7)C11—C9—C7—C81.6 (7)
C2—N3—C1—N230.0 (6)C11—C9—C7—C6177.8 (4)
C3—N3—C1—N2158.9 (4)C11—C12—C10—C80.9 (7)
C9—C11—C12—C100.2 (7)S1—C12—C10—C8178.5 (4)
C9—C11—C12—S1179.2 (3)C9—C7—C8—C100.9 (7)
O1—S1—C12—C11112.7 (5)C6—C7—C8—C10178.5 (5)
O2—S1—C12—C11127.6 (4)C12—C10—C8—C70.4 (8)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H12···O2i0.92 (5)1.91 (5)2.817 (5)169 (4)
N1—H11···O30.79 (5)2.10 (5)2.884 (5)174 (5)
Symmetry code: (i) x+1, y+1, z+1.

Experimental details

(I)(II)
Crystal data
Chemical formulaC5H14N3+·C7H7O2SC5H14N3+·C7H7O2.82S
Mr271.38284.44
Crystal system, space groupMonoclinic, P21/cMonoclinic, P21/c
Temperature (K)105296
a, b, c (Å)11.0959 (8), 7.4038 (5), 17.1944 (13)11.185 (3), 7.648 (2), 17.415 (5)
β (°) 92.115 (1) 93.169 (4)
V3)1411.59 (18)1487.5 (8)
Z44
Radiation typeMo KαMo Kα
µ (mm1)0.230.23
Crystal size (mm)0.6 × 0.4 × 0.30.8 × 0.3 × 0.2
Data collection
DiffractometerBruker APEXII CCD area-detector
diffractometer
Bruker APEXII CCD area-detector
diffractometer
Absorption correctionMulti-scan
(SADABS; Bruker, 2007)
Multi-scan
(SADABS; Bruker, 2007)
Tmin, Tmax0.857, 0.9340.710, 0.956
No. of measured, independent and
observed [I > 2σ(I)] reflections
11987, 3375, 3026 10043, 2615, 1587
Rint0.0170.045
(sin θ/λ)max1)0.6660.596
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.030, 0.085, 1.05 0.063, 0.155, 1.08
No. of reflections33752615
No. of parameters174187
H-atom treatmentH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.45, 0.250.33, 0.38

Computer programs: APEX2 (Bruker, 2007), SAINT-Plus (Bruker, 2007), SHELXTL (Sheldrick, 2008).

Hydrogen-bond geometry (Å, º) for (I) top
D—H···AD—HH···AD···AD—H···A
N1—H11···O1i0.856 (16)1.938 (16)2.7902 (13)173.4 (15)
N1—H12···O20.862 (16)1.977 (16)2.8347 (13)172.5 (14)
Symmetry code: (i) x+1, y+1, z+1.
Hydrogen-bond geometry (Å, º) for (II) top
D—H···AD—HH···AD···AD—H···A
N1—H12···O2i0.92 (5)1.91 (5)2.817 (5)169 (4)
N1—H11···O30.79 (5)2.10 (5)2.884 (5)174 (5)
Symmetry code: (i) x+1, y+1, z+1.
 

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