In the title compound, C8H10NO2+·Cl-, the asymmetric unit consists of a protonated DL-phenylglycine cation and a chloride anion. The crystal structure consists of alternating layers of hydrophobic and hydrophilic zones of phenylglycinium along the c axis. The chloride anions are located between hydrophobic zones, forming hydrogen bonds with N and O atoms of the cations, in hydrophilic zones. These ions are linked by cation-cation and cation-anion hydrogen bonds. This three-dimensional complex network of hydrogen bonds reinforces the cohesion of the ionic structure.
Supporting information
CCDC reference: 298435
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.002 Å
- R factor = 0.030
- wR factor = 0.116
- Data-to-parameter ratio = 18.2
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 2
Cl
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
1 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: COLLECT (Nonius, 2000); cell refinement: SCALEPACK (Otwinowski & Minor, 1997); data reduction: SCALEPACK and DENZO (Otwinowski & Minor 1997); program(s) used to solve structure: SIR2002 (Burla et al., 2005); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia,1997) and PLATON (Spek, 2003); software used to prepare material for publication: WinGX publication routines (Farrugia, 1999).
Crystal data top
C8H10NO2+·Cl− | F(000) = 784 |
Mr = 187.62 | Dx = 1.446 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 20517 reflections |
a = 7.303 (2) Å | θ = 1.9–27.6° |
b = 11.005 (2) Å | µ = 0.4 mm−1 |
c = 21.447 (4) Å | T = 296 K |
V = 1723.7 (7) Å3 | Prism, colourless |
Z = 8 | 0.13 × 0.08 × 0.05 mm |
Data collection top
Nonius KappaCCD diffractometer | 1563 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.030 |
Graphite monochromator | θmax = 27.6°, θmin = 1.9° |
φ scans, and ω scans with κ offsets | h = −9→9 |
20517 measured reflections | k = −14→11 |
1979 independent reflections | l = −27→27 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.030 | H-atom parameters constrained |
wR(F2) = 0.116 | w = 1/[σ2(Fo2) + (0.0293P)2 + 1.3984P] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max = 0.001 |
1979 reflections | Δρmax = 0.32 e Å−3 |
109 parameters | Δρmin = −0.24 e Å−3 |
0 restraints | Extinction correction: SHELXL97 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl1 | −0.24540 (5) | 0.62877 (3) | 0.926359 (19) | 0.03243 (17) | |
O1 | 0.22347 (16) | 0.55882 (10) | 0.94637 (6) | 0.0314 (3) | |
O2 | 0.45649 (18) | 0.43732 (13) | 0.91952 (6) | 0.0430 (4) | |
H2 | 0.5190 | 0.4967 | 0.9286 | 0.065* | |
N1 | −0.0165 (2) | 0.36896 (12) | 0.94555 (7) | 0.0308 (3) | |
H1A | 0.0022 | 0.3742 | 0.9865 | 0.046* | |
H1B | −0.0873 | 0.3051 | 0.9374 | 0.046* | |
H1C | −0.0713 | 0.4363 | 0.9321 | 0.046* | |
C2 | 0.1391 (2) | 0.34440 (14) | 0.84314 (7) | 0.0233 (3) | |
C1 | 0.1623 (2) | 0.35436 (14) | 0.91314 (7) | 0.0244 (3) | |
H1 | 0.2212 | 0.2800 | 0.9284 | 0.029* | |
C3 | 0.0697 (2) | 0.44071 (14) | 0.80843 (7) | 0.0281 (4) | |
H3 | 0.0293 | 0.5108 | 0.8283 | 0.034* | |
C7 | 0.1954 (2) | 0.23959 (14) | 0.81299 (8) | 0.0290 (4) | |
H7 | 0.2397 | 0.1744 | 0.8361 | 0.035* | |
C5 | 0.1203 (2) | 0.32736 (17) | 0.71439 (7) | 0.0327 (4) | |
H5 | 0.1159 | 0.3221 | 0.6711 | 0.039* | |
C4 | 0.0609 (2) | 0.43167 (16) | 0.74397 (8) | 0.0332 (4) | |
H4 | 0.0150 | 0.4960 | 0.7206 | 0.040* | |
C8 | 0.2836 (2) | 0.46209 (15) | 0.92932 (7) | 0.0252 (3) | |
C6 | 0.1861 (2) | 0.23127 (16) | 0.74877 (8) | 0.0334 (4) | |
H6 | 0.2243 | 0.1607 | 0.7288 | 0.040* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.0310 (3) | 0.0298 (3) | 0.0365 (3) | 0.00346 (15) | −0.00030 (16) | 0.00309 (15) |
O1 | 0.0343 (7) | 0.0231 (6) | 0.0367 (6) | −0.0017 (5) | 0.0043 (5) | −0.0026 (5) |
O2 | 0.0275 (7) | 0.0431 (8) | 0.0585 (8) | −0.0034 (6) | 0.0040 (6) | −0.0187 (6) |
N1 | 0.0324 (8) | 0.0284 (7) | 0.0316 (7) | −0.0073 (6) | 0.0072 (6) | −0.0041 (5) |
C2 | 0.0227 (7) | 0.0230 (7) | 0.0242 (7) | −0.0043 (6) | 0.0009 (6) | −0.0013 (6) |
C1 | 0.0267 (8) | 0.0217 (8) | 0.0249 (7) | −0.0003 (6) | 0.0015 (6) | −0.0001 (6) |
C3 | 0.0296 (8) | 0.0242 (8) | 0.0306 (8) | 0.0006 (6) | −0.0021 (6) | −0.0015 (6) |
C7 | 0.0340 (9) | 0.0224 (8) | 0.0306 (8) | 0.0012 (6) | 0.0008 (7) | 0.0002 (6) |
C5 | 0.0307 (8) | 0.0429 (10) | 0.0244 (8) | −0.0059 (8) | −0.0022 (6) | −0.0023 (7) |
C4 | 0.0321 (8) | 0.0345 (9) | 0.0330 (9) | −0.0016 (7) | −0.0073 (7) | 0.0061 (7) |
C8 | 0.0264 (8) | 0.0287 (9) | 0.0206 (7) | −0.0020 (6) | 0.0011 (6) | −0.0004 (6) |
C6 | 0.0351 (9) | 0.0320 (9) | 0.0331 (8) | 0.0000 (7) | 0.0025 (7) | −0.0098 (7) |
Geometric parameters (Å, º) top
O1—C8 | 1.208 (2) | C1—H1 | 0.9800 |
O2—C8 | 1.308 (2) | C3—C4 | 1.388 (2) |
O2—H2 | 0.8200 | C3—H3 | 0.9300 |
N1—C1 | 1.488 (2) | C7—C6 | 1.382 (2) |
N1—H1A | 0.8900 | C7—H7 | 0.9300 |
N1—H1B | 0.8900 | C5—C6 | 1.376 (3) |
N1—H1C | 0.8900 | C5—C4 | 1.381 (3) |
C2—C7 | 1.385 (2) | C5—H5 | 0.9300 |
C2—C3 | 1.391 (2) | C4—H4 | 0.9300 |
C2—C1 | 1.515 (2) | C6—H6 | 0.9300 |
C1—C8 | 1.520 (2) | | |
| | | |
C8—O2—H2 | 109.5 | C4—C3—H3 | 120.2 |
C1—N1—H1A | 109.5 | C2—C3—H3 | 120.2 |
C1—N1—H1B | 109.5 | C6—C7—C2 | 120.39 (15) |
H1A—N1—H1B | 109.5 | C6—C7—H7 | 119.8 |
C1—N1—H1C | 109.5 | C2—C7—H7 | 119.8 |
H1A—N1—H1C | 109.5 | C6—C5—C4 | 120.15 (15) |
H1B—N1—H1C | 109.5 | C6—C5—H5 | 119.9 |
C7—C2—C3 | 119.55 (14) | C4—C5—H5 | 119.9 |
C7—C2—C1 | 119.33 (14) | C5—C4—C3 | 120.18 (15) |
C3—C2—C1 | 121.06 (14) | C5—C4—H4 | 119.9 |
N1—C1—C2 | 111.88 (13) | C3—C4—H4 | 119.9 |
N1—C1—C8 | 108.69 (12) | O1—C8—O2 | 125.66 (15) |
C2—C1—C8 | 110.37 (12) | O1—C8—C1 | 122.97 (15) |
N1—C1—H1 | 108.6 | O2—C8—C1 | 111.29 (13) |
C2—C1—H1 | 108.6 | C5—C6—C7 | 120.02 (16) |
C8—C1—H1 | 108.6 | C5—C6—H6 | 120.0 |
C4—C3—C2 | 119.69 (15) | C7—C6—H6 | 120.0 |
| | | |
C7—C2—C1—N1 | −118.51 (16) | C6—C5—C4—C3 | 0.9 (3) |
C3—C2—C1—N1 | 64.33 (18) | C2—C3—C4—C5 | 0.2 (2) |
C7—C2—C1—C8 | 120.33 (16) | N1—C1—C8—O1 | −23.3 (2) |
C3—C2—C1—C8 | −56.84 (19) | C2—C1—C8—O1 | 99.77 (17) |
C7—C2—C3—C4 | −1.3 (2) | N1—C1—C8—O2 | 159.70 (13) |
C1—C2—C3—C4 | 175.90 (15) | C2—C1—C8—O2 | −77.26 (17) |
C3—C2—C7—C6 | 1.2 (2) | C4—C5—C6—C7 | −1.0 (3) |
C1—C2—C7—C6 | −175.99 (15) | C2—C7—C6—C5 | −0.1 (3) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Cl1i | 0.89 | 2.58 | 3.3475 (18) | 145 |
N1—H1A···O1i | 0.89 | 2.31 | 2.879 (2) | 122 |
N1—H1B···Cl1ii | 0.89 | 2.31 | 3.1906 (17) | 173 |
N1—H1C···Cl1 | 0.89 | 2.47 | 3.3375 (17) | 164 |
O2—H2···Cl1iii | 0.82 | 2.25 | 3.0332 (16) | 159 |
C1—H1···O1iv | 0.98 | 2.50 | 3.433 (2) | 159 |
C5—H5···O2v | 0.93 | 2.60 | 3.338 (2) | 137 |
Symmetry codes: (i) −x, −y+1, −z+2; (ii) −x−1/2, y−1/2, z; (iii) x+1, y, z; (iv) −x+1/2, y−1/2, z; (v) x−1/2, y, −z+3/2. |