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The title dipeptide, 1-(tert-butoxy­carbonyl-D-alanyl)-N-iso­propyl-L-pipecol­amide or Boc-D-Ala-L-Pip-NHiPr (H-Pip-OH is pipecolic acid or piperidine-2-carboxylic acid), C17H31N3­O4, with a DL heterochiral sequence, adopts a type II′ β-­turn conformation, with all-trans amide functions, where the C-terminal amide NH group interacts with the Boc carbonyl O atom to form a classical i+3 \rightarrow i intramolecular hydrogen bond. The Cα substituent takes an axial position [Hα (Pip) equatorial] and the trans pipecolamide function is nearly planar.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270102008715/dn1009sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270102008715/dn1009Isup2.hkl
Contains datablock I

CCDC reference: 192976

Comment top

With the advent of the post-genomic era, a larger number either of peptides or peptidomimetics will be designed as available drugs for studying their role in the development and care of diseases. In addition, with sequences of natural amino acids, those with different topologies containing non-coded building blocks will be mandatory to face this challenge.

Of the three main types of structural motifs (β-sheets, helices and turns of loops), the β-turn, which is often involved in molecular recognition processes, offers the significant advantage that it is compact and of such a size that it can readily be encountered in the totally amidated dipeptide sequence R—CO-Xaa-Yaa-NH—R'.

The widespread naturally occurring non-proteinogenic amino acid, pipecolic acid, H-Pip-OH (also known as homoproline or piperidine-2-carboxylic acid), is a proline analogue with a six-membered piperidine ring and which is found in many biologically active compounds. It is a component of several antibiotics, immunosuppressants and inhibitors of HIV protease, and has been extensively used as a proline substitute in numerous syntheses of peptidomimetics studied in structure-activity relationships.

As part of an overall conformational analysis project aimed at exploring local perturbations induced by the substitution either of Pip or AzPip (AzPip is the homologue of Pip in which an Nα atom has been substituted for the Pip Cα atom), we recently reported the crystal structures of Boc-L-Ala-(S)AzPip-NHiPr and of Piv-L/DPip-NHMe (Didierjean et al., 2000), and in this paper, we present the molecular crystal-structure resolution of Boc-D-Ala-L-Pip-NHiPr, (I), for the purpose of giving prominence to conformational bias. \sch

A view of the molecule of (I) with the atom-numbering scheme is shown in Fig. 1. Selected torsion angles and hydrogen bonds with their geometry and symmetry geometry are given in Tables 1 and 2, respectively. The bond lengths and angles are in agreement with literature data on the geometry of the Pip residue (Bhattacharjee & Chacko, 1979; Rae et al., 1980; Bardi et al., 1992; Didierjean et al., 2000) and Boc urethane derivatives (Benedetti et al., 1980). A type b of this latter N-protecting group is assumed by the trans arrangement of both C1—O1 versus C5—N1 and the CONH amide bond of the urethane group. The C-terminal isopropyl group is disordered and was modelled over two positions with restrained distances and angles.

The piperidine ring adopts a chair (4C1) conformation with the Hα atom in the equatorial disposition, as expected from calculations (Toniolo et al., 1989) and as also found in Piv-D/LPip-NHMe (Didierjean et al., 2000). The piperidyl imide link is trans [ω = 176.8 (3)°] and atom N2 exhibits a very low displacement [0.033 (3) Å] from the plane defined by its three substituents.

The molecule of (I) is folded by a type-II' β-bend conformation, with D-Ala as i+1 and L-Pip as i+2 corner residues. The 4 1 intramolecular hydrogen bond takes place between the donor (NHiPr) C-terminal amide group and the (Boc)urethane carbonyl acceptor sites (Fig. 1, Table 2).

Concerning the molecular packing, an intermolecular N—H···OC hydrogen-bonding network occurs along the a axis, involving the urethane (D-Ala)N—H as donor and the amide (Pip)CO as acceptor (Fig. 2, Table 2). The crystal can be described as forming infinite chains, where each chain forms weak van der Waals interactions with neighbouring chains.

If we compare the conformation of (I) with that of Boc-L-Ala-(S)AzPip-NHiPr (Didierjean et al., 2000), the two prominent changes are a cis disposition for the median AzPip imide bond and type-VI β-turn-like folding. Thus, local modification of the three-dimensional structure can be achieved by using the Pip/AzPip couple, and this should be of great interest when designing new building blocks for peptidomimetics.

Experimental top

The synthesis of Boc-D-Ala-L-Pip-NHiPr was carried out as follows. The classical DIC/AtOH/DIEA (1/1/1) method was applied, starting from Boc-D-Ala-OH and enantiomerically pure H—L-Pip-NHiPr, obtained after elimination of the Boc protective group (HCl/AcOEt, ~3 N) of Boc-L-Pip-NHiPr, which was previously obtained by reaction of optically pure Boc-L-Pip-OH (BA 14202, Neosystem, Strasbourg, France) with isopropylamine according to the DIC/BtOH/DIEA (1/1/1) method. The crude dipeptide was chromatographed on silica gel using pure AcOEt as eluting solvent, to give Boc-D-Ala-L-Pip-NHiPr, (I), as a white solid. Single crystals of (I) were grown from a dilute ethyl acetate solution by slow evaporation at room temperature (F = m.p.? 444 K; yield 80%) Thin layer chromatography: Rf = 0.43, AcOEt/Hexanes 1/1. Spectroscopic analysis: [α]D = -78.2 (c = 1.0, CHCl3, at 299 K); 1H NMR (CDCl3, δ, p.p.m.): 6.28 [d, bd, 1H, NH(iPr)], 5.3–5.1 [m, 2H, NH(Ala) CHα(Pip)], 4.53 [m, 1H, CHα(Ala)], 4.09 [m, 1H, CH(iPr)], 3.80 (d, J = 13.8 Hz, 1H, Hεeq), 3.11 (m, 1H, Hεax), 2.42 (d, J = 12.4 Hz, 1H, Hβeq), 1.8–1.4 (m, 5H, Hβax, H2γ, H2δ), 1.43 (s, 9H, tBu), 1.32 [d, J = 7.4 Hz, 3H, Me(Ala)], 1.2–1.0 [m, 6H, Me2(iPr)].

Refinement top

Because of the lack of any significant anomalous dispersion effects, the absolute conformation could not be determined from the diffraction experiment. Friedel pairs were merged prior to refinement. The C-terminal isopropyl group was found to be disordered and was modelled over two sites [occupancy factors 0.48 (2):0.52 (2)]. All non-H atoms were refined anisotropically, except the C atoms of the two methyl groups of the C-terminal isopropyl group. The H atoms of the disordered methyl group were not placed. Other H atoms connected to C atoms were placed at calculated positions using a riding model, with C—H = 0.96–0.98 Å. The positions of H atoms attached to N atoms were located from a difference map and the N—H bond distance was restrained to 1.03 (1) Å (Taylor & Kennard, 1983). All H atoms were refined with their isotropic displacement parameters fixed at 1.3 times that of the parent atom.

Computing details top

Data collection: COLLECT (Nonius, 1998); cell refinement: COLLECT; data reduction: HKL suite (Otwinoski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997).

Figures top
[Figure 1] Fig. 1. The molecular structure of (I) with the atom-numbering scheme and 25% probability displacement ellipsoids. For clarity, only one conformation of the disordered isopropyl group (C15A—C17A) and N-bound H atoms are shown. The intramolecular hydrogen bond is drawn as dashed lines.
[Figure 2] Fig. 2. A view along the a axis showing the crystal packing of (I). The intra- and intermolecular hydrogen-bonding schemes are shown as thin and thick dashed lines, respectively.
1-(tert-butoxycarbonyl-D-alanyl)-N-isopropyl-L-pipecolamide top
Crystal data top
C17H31N3O4F(000) = 372
Mr = 341.45Dx = 1.132 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71070 Å
Hall symbol: P 2ybCell parameters from 6016 reflections
a = 9.3630 (2) Åθ = 3.3–25.7°
b = 9.9720 (5) ŵ = 0.08 mm1
c = 11.1270 (5) ÅT = 293 K
β = 105.330 (3)°Prismatic, colourless
V = 1001.94 (7) Å30.4 × 0.3 × 0.2 mm
Z = 2
Data collection top
Nonius KappaCCD area-detector
diffractometer
1616 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.029
Graphite monochromatorθmax = 25.7°, θmin = 3.3°
oscillation scansh = 1111
6016 measured reflectionsk = 1212
1978 independent reflectionsl = 1313
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.054H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.150 w = 1/[σ2(Fo2) + (0.0932P)2 + 0.135P]
where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.005
1978 reflectionsΔρmax = 0.41 e Å3
232 parametersΔρmin = 0.19 e Å3
9 restraintsExtinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.15 (2)
Crystal data top
C17H31N3O4V = 1001.94 (7) Å3
Mr = 341.45Z = 2
Monoclinic, P21Mo Kα radiation
a = 9.3630 (2) ŵ = 0.08 mm1
b = 9.9720 (5) ÅT = 293 K
c = 11.1270 (5) Å0.4 × 0.3 × 0.2 mm
β = 105.330 (3)°
Data collection top
Nonius KappaCCD area-detector
diffractometer
1616 reflections with I > 2σ(I)
6016 measured reflectionsRint = 0.029
1978 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0549 restraints
wR(F2) = 0.150H atoms treated by a mixture of independent and constrained refinement
S = 1.06Δρmax = 0.41 e Å3
1978 reflectionsΔρmin = 0.19 e Å3
232 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
C11.0553 (4)0.0759 (5)0.6436 (4)0.0691 (11)
C20.9631 (5)0.1461 (6)0.7142 (5)0.0879 (14)
H2A0.87750.09270.71340.114*
H2B1.02010.15960.79870.114*
H2C0.93210.23140.67610.114*
C30.9625 (8)0.0412 (7)0.5114 (5)0.111 (2)
H3A0.87650.00870.51630.145*
H3B0.93230.12240.46540.145*
H3C1.02080.01180.47010.145*
C41.1887 (6)0.1566 (7)0.6423 (8)0.128 (3)
H4A1.24010.18080.72610.166*
H4B1.25310.10470.60620.166*
H4C1.15890.23640.59390.166*
O11.1195 (3)0.0476 (3)0.7071 (3)0.0714 (8)
C51.0326 (4)0.1490 (4)0.7269 (3)0.0544 (8)
O20.8992 (2)0.1546 (3)0.6887 (2)0.0668 (7)
N11.1166 (3)0.2456 (3)0.7958 (3)0.0564 (8)
H11.2291 (13)0.236 (5)0.821 (4)0.073*
C61.0471 (3)0.3662 (4)0.8254 (3)0.0533 (8)
H60.99830.41300.74790.069*
C71.1613 (4)0.4584 (5)0.9072 (5)0.0851 (15)
H7A1.11340.53810.92530.111*
H7B1.23440.48210.86450.111*
H7C1.20850.41330.98360.111*
C80.9307 (3)0.3290 (3)0.8948 (3)0.0456 (7)
O30.9578 (2)0.2407 (3)0.9737 (2)0.0637 (7)
N20.8009 (3)0.3980 (3)0.8678 (2)0.0462 (7)
C90.6863 (3)0.3581 (4)0.9290 (3)0.0515 (8)
H90.73380.30131.00020.067*
C100.6225 (4)0.4811 (5)0.9800 (4)0.0679 (11)
H10A0.53970.45321.01120.088*
H10B0.69760.51861.04920.088*
C110.5713 (4)0.5871 (5)0.8824 (4)0.0742 (12)
H11A0.53710.66490.91920.096*
H11B0.48910.55310.81700.096*
C120.6972 (4)0.6276 (4)0.8271 (5)0.0731 (11)
H12A0.77580.66900.89100.095*
H12B0.66160.69280.76120.095*
C130.7573 (4)0.5049 (4)0.7747 (4)0.0595 (9)
H13A0.68210.47100.70360.077*
H13B0.84240.53110.74590.077*
C140.5632 (3)0.2752 (4)0.8427 (3)0.0529 (8)
O40.4396 (3)0.2722 (3)0.8605 (3)0.0752 (9)
N30.5991 (3)0.2034 (3)0.7534 (3)0.0636 (9)
H30.698 (3)0.209 (5)0.731 (4)0.083*
C15A0.4988 (15)0.1104 (10)0.6726 (13)0.089 (8)0.517 (17)
H15A0.40370.11020.69380.116*0.517 (17)
C16A0.476 (3)0.160 (3)0.5407 (17)0.187 (9)*0.517 (17)
C17A0.5687 (12)0.0270 (12)0.6970 (13)0.094 (4)*0.517 (17)
C15B0.4891 (12)0.1228 (8)0.6671 (11)0.058 (6)0.483 (17)
H15B0.42470.08610.71560.075*0.483 (17)
C16B0.3901 (11)0.2051 (11)0.5647 (8)0.084 (4)*0.483 (17)
C17B0.5570 (12)0.0034 (11)0.6199 (12)0.086 (4)*0.483 (17)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.069 (2)0.064 (3)0.078 (2)0.0136 (19)0.0270 (19)0.022 (2)
C20.084 (3)0.082 (3)0.098 (3)0.007 (3)0.024 (2)0.013 (3)
C30.163 (6)0.102 (5)0.075 (3)0.033 (4)0.042 (3)0.033 (3)
C40.090 (3)0.086 (4)0.225 (7)0.017 (3)0.073 (4)0.079 (5)
O10.0528 (13)0.0653 (18)0.101 (2)0.0087 (13)0.0291 (13)0.0319 (15)
C50.0508 (18)0.058 (2)0.0583 (18)0.0051 (17)0.0220 (14)0.0075 (16)
O20.0449 (12)0.0794 (18)0.0719 (15)0.0037 (13)0.0083 (10)0.0130 (14)
N10.0404 (13)0.0544 (17)0.0761 (18)0.0035 (13)0.0186 (12)0.0140 (15)
C60.0468 (16)0.0446 (18)0.074 (2)0.0013 (14)0.0260 (15)0.0020 (16)
C70.055 (2)0.061 (3)0.147 (4)0.0160 (19)0.040 (2)0.040 (3)
C80.0427 (16)0.0429 (18)0.0506 (17)0.0022 (13)0.0111 (12)0.0007 (15)
O30.0561 (14)0.0656 (17)0.0701 (15)0.0096 (12)0.0178 (11)0.0187 (14)
N20.0368 (12)0.0474 (16)0.0559 (14)0.0008 (11)0.0149 (10)0.0027 (12)
C90.0405 (15)0.064 (2)0.0525 (17)0.0038 (15)0.0161 (13)0.0012 (16)
C100.058 (2)0.081 (3)0.070 (2)0.005 (2)0.0263 (18)0.021 (2)
C110.059 (2)0.066 (3)0.098 (3)0.0130 (19)0.022 (2)0.017 (2)
C120.058 (2)0.057 (2)0.101 (3)0.0049 (19)0.0128 (19)0.000 (2)
C130.0558 (19)0.055 (2)0.072 (2)0.0068 (16)0.0240 (17)0.0129 (18)
C140.0443 (16)0.049 (2)0.068 (2)0.0023 (14)0.0182 (15)0.0031 (16)
O40.0446 (12)0.084 (2)0.104 (2)0.0117 (13)0.0313 (13)0.0115 (17)
N30.0434 (15)0.065 (2)0.082 (2)0.0060 (14)0.0159 (14)0.0205 (18)
C15A0.085 (13)0.076 (12)0.114 (16)0.010 (11)0.042 (11)0.017 (12)
C15B0.040 (7)0.055 (9)0.067 (10)0.008 (7)0.006 (7)0.019 (7)
Geometric parameters (Å, º) top
C1—O11.468 (5)N2—C91.469 (4)
C1—C21.488 (6)C9—C141.533 (5)
C1—C41.489 (7)C9—C101.537 (5)
C1—C31.536 (8)C9—H90.9800
C2—H2A0.9600C10—C111.501 (7)
C2—H2B0.9600C10—H10A0.9700
C2—H2C0.9600C10—H10B0.9700
C3—H3A0.9600C11—C121.521 (6)
C3—H3B0.9600C11—H11A0.9700
C3—H3C0.9600C11—H11B0.9700
C4—H4A0.9600C12—C131.526 (6)
C4—H4B0.9600C12—H12A0.9700
C4—H4C0.9600C12—H12B0.9700
O1—C51.351 (5)C13—H13A0.9700
C5—O21.210 (4)C13—H13B0.9700
C5—N11.348 (5)C14—O41.225 (4)
N1—C61.446 (4)C14—N31.338 (5)
N1—H11.020 (10)N3—C15A1.450 (5)
C6—C71.518 (5)N3—C15B1.451 (5)
C6—C81.538 (4)N3—H31.023 (10)
C6—H60.9800C15A—C16A1.510 (5)
C7—H7A0.9600C15A—C17A1.512 (5)
C7—H7B0.9600C15A—H15A0.9800
C7—H7C0.9600C15B—C16B1.508 (5)
C8—O31.221 (4)C15B—C17B1.509 (5)
C8—N21.360 (4)C15B—H15B0.9800
N2—C131.468 (5)
O1—C1—C2111.2 (4)N2—C9—C10111.0 (3)
O1—C1—C4102.7 (3)C14—C9—C10111.1 (3)
C2—C1—C4110.9 (5)N2—C9—H9107.5
O1—C1—C3109.1 (4)C14—C9—H9107.5
C2—C1—C3110.6 (4)C10—C9—H9107.5
C4—C1—C3112.1 (5)C11—C10—C9112.0 (3)
C1—C2—H2A109.5C11—C10—H10A109.2
C1—C2—H2B109.5C9—C10—H10A109.2
H2A—C2—H2B109.5C11—C10—H10B109.2
C1—C2—H2C109.5C9—C10—H10B109.2
H2A—C2—H2C109.5H10A—C10—H10B107.9
H2B—C2—H2C109.5C10—C11—C12110.3 (3)
C1—C3—H3A109.5C10—C11—H11A109.6
C1—C3—H3B109.5C12—C11—H11A109.6
H3A—C3—H3B109.5C10—C11—H11B109.6
C1—C3—H3C109.5C12—C11—H11B109.6
H3A—C3—H3C109.5H11A—C11—H11B108.1
H3B—C3—H3C109.5C11—C12—C13110.2 (3)
C1—C4—H4A109.5C11—C12—H12A109.6
C1—C4—H4B109.5C13—C12—H12A109.6
H4A—C4—H4B109.5C11—C12—H12B109.6
C1—C4—H4C109.5C13—C12—H12B109.6
H4A—C4—H4C109.5H12A—C12—H12B108.1
H4B—C4—H4C109.5N2—C13—C12112.0 (3)
C5—O1—C1121.2 (3)N2—C13—H13A109.2
O2—C5—N1124.1 (3)C12—C13—H13A109.2
O2—C5—O1126.0 (3)N2—C13—H13B109.2
N1—C5—O1110.0 (3)C12—C13—H13B109.2
C5—N1—C6119.6 (3)H13A—C13—H13B107.9
C5—N1—H1120 (3)O4—C14—N3122.7 (3)
C6—N1—H1120 (3)O4—C14—C9119.9 (3)
N1—C6—C7110.6 (3)N3—C14—C9117.3 (3)
N1—C6—C8109.5 (3)C14—N3—C15A123.6 (8)
C7—C6—C8109.0 (3)C14—N3—C15B120.9 (7)
N1—C6—H6109.2C15A—N3—C15B6.2 (7)
C7—C6—H6109.2C14—N3—H3125 (3)
C8—C6—H6109.2C15A—N3—H3111 (3)
C6—C7—H7A109.5C15B—N3—H3114 (3)
C6—C7—H7B109.5N3—C15A—C16A107.2 (13)
H7A—C7—H7B109.5N3—C15A—C17A106.8 (8)
C6—C7—H7C109.5C16A—C15A—C17A114.4 (16)
H7A—C7—H7C109.5N3—C15A—H15A109.4
H7B—C7—H7C109.5C16A—C15A—H15A109.4
O3—C8—N2121.8 (3)C17A—C15A—H15A109.4
O3—C8—C6119.7 (3)N3—C15B—C16B112.7 (7)
N2—C8—C6118.5 (3)N3—C15B—C17B112.1 (8)
C8—N2—C13126.1 (3)C16B—C15B—C17B113.4 (10)
C8—N2—C9118.7 (3)N3—C15B—H15B106.0
C13—N2—C9115.0 (3)C16B—C15B—H15B106.0
N2—C9—C14112.1 (3)C17B—C15B—H15B106.0
C2—C1—O1—C561.5 (5)N2—C9—C14—O4155.5 (3)
C4—C1—O1—C5179.8 (5)C10—C9—C14—O430.7 (5)
C3—C1—O1—C560.7 (5)C10—C9—C14—N3152.4 (3)
C1—O1—C5—O25.7 (6)O4—C14—N3—C15A2.9 (8)
O2—C5—N1—C61.5 (5)O4—C14—N3—C15B3.6 (8)
C5—N1—C6—C7178.0 (4)C14—N3—C15A—C16A119.0 (14)
N1—C6—C8—O340.6 (4)C15B—N3—C15A—C16A53 (13)
C7—C6—C8—O380.6 (4)C14—N3—C15A—C17A117.9 (11)
C7—C6—C8—N298.1 (4)C15B—N3—C15A—C17A176 (14)
O3—C8—N2—C13179.6 (3)C14—N3—C15B—C16B78.8 (13)
C6—C8—N2—C131.7 (5)C15A—N3—C15B—C16B163 (14)
O3—C8—N2—C94.6 (5)C14—N3—C15B—C17B151.7 (9)
C13—N2—C9—C1473.9 (4)C15A—N3—C15B—C17B34 (12)
C8—N2—C9—C10133.4 (3)C1—O1—C5—N1174.7 (3)
C13—N2—C9—C1051.0 (4)O1—C5—N1—C6178.1 (3)
N2—C9—C10—C1152.4 (4)C5—N1—C6—C857.9 (4)
C14—C9—C10—C1173.0 (4)N1—C6—C8—N2140.7 (3)
C9—C10—C11—C1256.0 (4)C6—C8—N2—C9176.8 (3)
C10—C11—C12—C1356.4 (4)C8—N2—C9—C14101.7 (3)
C8—N2—C13—C12131.9 (3)N2—C9—C14—N327.6 (5)
C9—N2—C13—C1252.9 (4)C9—C14—N3—C15A173.9 (7)
C11—C12—C13—N254.3 (4)C9—C14—N3—C15B179.6 (6)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O4i1.02 (1)1.94 (2)2.929 (3)164 (4)
N3—H3···O21.02 (1)2.13 (2)3.118 (4)162 (4)
Symmetry code: (i) x+1, y, z.

Experimental details

Crystal data
Chemical formulaC17H31N3O4
Mr341.45
Crystal system, space groupMonoclinic, P21
Temperature (K)293
a, b, c (Å)9.3630 (2), 9.9720 (5), 11.1270 (5)
β (°) 105.330 (3)
V3)1001.94 (7)
Z2
Radiation typeMo Kα
µ (mm1)0.08
Crystal size (mm)0.4 × 0.3 × 0.2
Data collection
DiffractometerNonius KappaCCD area-detector
diffractometer
Absorption correction
No. of measured, independent and
observed [I > 2σ(I)] reflections
6016, 1978, 1616
Rint0.029
(sin θ/λ)max1)0.610
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.054, 0.150, 1.06
No. of reflections1978
No. of parameters232
No. of restraints9
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.41, 0.19

Computer programs: COLLECT (Nonius, 1998), COLLECT, HKL suite (Otwinoski & Minor, 1997), SIR92 (Altomare et al., 1994), SHELXL97 (Sheldrick, 1997), ORTEP-3 (Farrugia, 1997).

Selected torsion angles (º) top
C1—O1—C5—N1174.7 (3)C8—N2—C9—C14101.7 (3)
O1—C5—N1—C6178.1 (3)N2—C9—C14—N327.6 (5)
C5—N1—C6—C857.9 (4)C9—C14—N3—C15A173.9 (7)
N1—C6—C8—N2140.7 (3)C9—C14—N3—C15B179.6 (6)
C6—C8—N2—C9176.8 (3)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O4i1.020 (10)1.936 (17)2.929 (3)164 (4)
N3—H3···O21.023 (10)2.127 (19)3.118 (4)162 (4)
Symmetry code: (i) x+1, y, z.
 

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