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The crystal structures of three (N-phenylthioureidoalkyl- and -aryl)phosphonates, i.e. diphenyl [(3-phenylthioureido)phenylpropyl]phosphonate, diphenyl [1-(3-phenylthioureido)benzyl]phosphonate and diphenyl [2,2-dimethyl-1-(3-phenylthioureido)propyl]phosphonate, have been determined by X-ray diffraction. The conformations of the title molecules, the geometry of the thioureide fragments and molecular packing arrangements are analyzed and compared with literature data.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108768104002770/de5004sup1.cif
Contains datablocks I, II, III, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108768104002770/de5004Isup2.hkl
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108768104002770/de5004IIsup3.hkl
Contains datablock II

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108768104002770/de5004IIIsup4.hkl
Contains datablock III

CCDC references: 218518; 218519; 218520

Computing details top

For all compounds, data collection: MSC/AFC Diffractometer Control Software (1989a); cell refinement: MSC/AFC Diffractometer Control Software (1989a); data reduction: TEXSAN (1989b); program(s) used to solve structure: SHELXS86 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 1998); software used to prepare material for publication: PARST97 (Nardelli, 1996).

Figures top
[Figure 1]
[Figure 2]
[Figure 3]
[Figure 4]
[Figure 5]
[Figure 6]
[Figure 7]
[Figure 8]
[Figure 9]
[Figure 10]
[Figure 11]
(I) diphenyl [(3-phenylthioureido)phenylpropyl]phosphonate top
Crystal data top
C28H27N2O3PSZ = 2
Mr = 502.55F(000) = 528
Triclinic, P1Dx = 1.259 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54178 Å
a = 9.951 (1) ÅCell parameters from 25 reflections
b = 12.201 (1) Åθ = 38.2–39.9°
c = 11.844 (1) ŵ = 1.91 mm1
α = 100.40 (1)°T = 293 K
β = 102.90 (1)°Prism, colourless
γ = 102.90 (1)°0.50 × 0.30 × 0.20 mm
V = 1325.6 (2) Å3
Data collection top
AFC5S Rigaku
diffractometer
3089 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.030
Graphite monochromatorθmax = 67.5°, θmin = 3.8°
ω scansh = 1111
Absorption correction: analytical
(De Meulenaer & Tompa, 1965)
k = 1414
Tmin = 0.448, Tmax = 0.701l = 1114
4878 measured reflections3 standard reflections every 150 reflections
4637 independent reflections intensity decay: <2%
Refinement top
Refinement on F2Secondary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.041H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.119 w = 1/[σ2(Fo2) + (0.0663P)2]
where P = (Fo2 + 2Fc2)/3
S = 0.94(Δ/σ)max < 0.001
4637 reflectionsΔρmax = 0.21 e Å3
325 parametersΔρmin = 0.28 e Å3
8 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0146 (7)
Crystal data top
C28H27N2O3PSγ = 102.90 (1)°
Mr = 502.55V = 1325.6 (2) Å3
Triclinic, P1Z = 2
a = 9.951 (1) ÅCu Kα radiation
b = 12.201 (1) ŵ = 1.91 mm1
c = 11.844 (1) ÅT = 293 K
α = 100.40 (1)°0.50 × 0.30 × 0.20 mm
β = 102.90 (1)°
Data collection top
AFC5S Rigaku
diffractometer
3089 reflections with I > 2σ(I)
Absorption correction: analytical
(De Meulenaer & Tompa, 1965)
Rint = 0.030
Tmin = 0.448, Tmax = 0.7013 standard reflections every 150 reflections
4878 measured reflections intensity decay: <2%
4637 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0418 restraints
wR(F2) = 0.119H atoms treated by a mixture of independent and constrained refinement
S = 0.94Δρmax = 0.21 e Å3
4637 reflectionsΔρmin = 0.28 e Å3
325 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
S10.44040 (7)0.31491 (6)0.19540 (5)0.0739 (2)
C10.2730 (2)0.23518 (19)0.17094 (18)0.0530 (5)
N10.2123 (2)0.21260 (18)0.25830 (16)0.0604 (5)
H10.137 (2)0.1608 (19)0.235 (2)0.071 (8)*
N20.1818 (2)0.18510 (16)0.05978 (15)0.0554 (5)
H20.096 (2)0.1402 (19)0.056 (2)0.068 (8)*
C20.2245 (2)0.18120 (19)0.05049 (18)0.0552 (6)
H2010.32760.21910.02880.066*
C30.1484 (3)0.24601 (19)0.1320 (2)0.0646 (6)
H3010.17680.23680.20560.078*
H3020.04560.21230.15200.078*
C40.1840 (3)0.3743 (2)0.0734 (2)0.0838 (9)
H4010.14690.38330.00420.101*
H4020.28740.40580.04570.101*
C510.1232 (3)0.4429 (2)0.1559 (2)0.0686 (7)
C520.0046 (3)0.4682 (2)0.1559 (2)0.0789 (8)
H520.05620.44120.10530.095*
C530.0573 (4)0.5328 (3)0.2296 (3)0.0950 (10)
H530.14470.54790.22900.114*
C540.0162 (4)0.5749 (3)0.3031 (3)0.1012 (10)
H540.01860.62060.35100.121*
C550.1432 (4)0.5489 (3)0.3058 (3)0.1078 (11)
H550.19310.57450.35800.129*
C560.1965 (3)0.4849 (3)0.2311 (3)0.0896 (9)
H560.28390.46990.23180.107*
P10.19730 (7)0.03069 (5)0.11821 (5)0.0559 (2)
O10.05416 (16)0.04412 (13)0.13141 (13)0.0615 (4)
O20.23898 (18)0.03783 (13)0.23782 (14)0.0694 (5)
O30.32302 (17)0.00571 (15)0.04221 (16)0.0721 (5)
C110.2849 (2)0.2468 (2)0.38339 (19)0.0574 (6)
C120.3023 (3)0.1639 (2)0.4444 (2)0.0766 (7)
H120.27080.08590.40460.092*
C130.3681 (3)0.1975 (3)0.5673 (3)0.0926 (9)
H130.38170.14180.60970.111*
C140.4121 (3)0.3114 (3)0.6245 (2)0.0910 (9)
H140.45470.33340.70650.109*
C150.3947 (3)0.3942 (3)0.5634 (2)0.0851 (9)
H150.42660.47210.60360.102*
C160.3301 (3)0.3627 (2)0.4426 (2)0.0683 (7)
H160.31680.41890.40100.082*
C210.2116 (3)0.0610 (2)0.33190 (19)0.0593 (6)
C220.0807 (3)0.0978 (3)0.4139 (2)0.0804 (8)
H220.00980.06100.40590.096*
C230.0554 (4)0.1902 (3)0.5085 (3)0.1042 (11)
H230.03400.21710.56430.125*
C240.1586 (5)0.2423 (3)0.5214 (3)0.1074 (12)
H240.14070.30370.58690.129*
C250.2905 (5)0.2055 (3)0.4385 (3)0.1025 (11)
H250.36100.24260.44720.123*
C260.3175 (3)0.1128 (3)0.3422 (3)0.0806 (8)
H260.40630.08650.28560.097*
C310.3108 (2)0.08783 (19)0.0249 (2)0.0614 (6)
C320.3310 (4)0.1936 (2)0.0180 (3)0.1039 (11)
H320.34520.21200.09340.125*
C330.3300 (4)0.2724 (3)0.0526 (3)0.1257 (14)
H330.34320.34430.02450.151*
C340.3095 (3)0.2449 (3)0.1646 (3)0.1040 (11)
H340.30840.29850.21150.125*
C350.2907 (4)0.1382 (3)0.2071 (3)0.1187 (12)
H350.27710.11950.28260.142*
C360.2923 (4)0.0592 (3)0.1371 (2)0.1049 (11)
H360.28090.01330.16580.126*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
S10.0622 (4)0.0842 (5)0.0536 (4)0.0046 (3)0.0118 (3)0.0013 (3)
C10.0558 (13)0.0537 (12)0.0438 (11)0.0110 (10)0.0114 (10)0.0051 (10)
N10.0600 (13)0.0648 (13)0.0423 (10)0.0005 (10)0.0081 (9)0.0061 (9)
N20.0550 (12)0.0595 (12)0.0406 (10)0.0043 (10)0.0084 (9)0.0049 (8)
C20.0623 (14)0.0537 (13)0.0421 (11)0.0075 (11)0.0109 (10)0.0076 (10)
C30.0807 (17)0.0584 (14)0.0485 (13)0.0154 (13)0.0110 (12)0.0104 (11)
C40.122 (2)0.0632 (16)0.0594 (16)0.0296 (16)0.0113 (15)0.0098 (13)
C510.087 (2)0.0559 (14)0.0590 (15)0.0195 (14)0.0158 (14)0.0108 (12)
C520.089 (2)0.088 (2)0.0609 (16)0.0228 (17)0.0253 (14)0.0181 (15)
C530.105 (2)0.114 (3)0.079 (2)0.053 (2)0.0272 (18)0.0252 (19)
C540.129 (3)0.100 (2)0.097 (2)0.053 (2)0.033 (2)0.047 (2)
C550.131 (3)0.112 (3)0.111 (3)0.039 (2)0.059 (2)0.064 (2)
C560.095 (2)0.099 (2)0.098 (2)0.0425 (19)0.0428 (18)0.0421 (19)
P10.0611 (4)0.0535 (3)0.0468 (3)0.0071 (3)0.0150 (3)0.0073 (3)
O10.0564 (10)0.0610 (9)0.0529 (9)0.0003 (8)0.0107 (7)0.0050 (7)
O20.0926 (13)0.0573 (9)0.0559 (9)0.0088 (9)0.0330 (9)0.0065 (8)
O30.0601 (10)0.0740 (11)0.0838 (12)0.0153 (9)0.0156 (9)0.0326 (10)
C110.0588 (14)0.0667 (14)0.0416 (12)0.0119 (11)0.0115 (10)0.0095 (11)
C120.088 (2)0.0750 (17)0.0690 (17)0.0220 (15)0.0209 (14)0.0253 (14)
C130.099 (2)0.124 (3)0.0696 (19)0.037 (2)0.0234 (16)0.051 (2)
C140.082 (2)0.131 (3)0.0495 (16)0.020 (2)0.0088 (14)0.0183 (18)
C150.092 (2)0.092 (2)0.0517 (15)0.0073 (17)0.0134 (14)0.0020 (15)
C160.0815 (18)0.0652 (15)0.0479 (13)0.0128 (13)0.0096 (12)0.0076 (12)
C210.0729 (16)0.0600 (14)0.0460 (12)0.0154 (12)0.0222 (12)0.0114 (11)
C220.086 (2)0.098 (2)0.0550 (15)0.0300 (17)0.0132 (14)0.0152 (15)
C230.121 (3)0.107 (3)0.0575 (18)0.011 (2)0.0061 (18)0.0022 (17)
C240.168 (4)0.081 (2)0.065 (2)0.016 (2)0.047 (2)0.0013 (16)
C250.149 (3)0.088 (2)0.105 (3)0.058 (2)0.075 (3)0.028 (2)
C260.082 (2)0.092 (2)0.0732 (18)0.0307 (17)0.0267 (15)0.0180 (16)
C310.0552 (14)0.0591 (14)0.0671 (15)0.0148 (11)0.0114 (12)0.0166 (12)
C320.152 (3)0.073 (2)0.089 (2)0.038 (2)0.036 (2)0.0130 (17)
C330.175 (4)0.065 (2)0.134 (3)0.038 (2)0.028 (3)0.030 (2)
C340.089 (2)0.096 (3)0.121 (3)0.0116 (19)0.005 (2)0.057 (2)
C350.155 (4)0.136 (3)0.096 (3)0.065 (3)0.046 (2)0.059 (3)
C360.165 (3)0.092 (2)0.082 (2)0.064 (2)0.045 (2)0.0317 (18)
Geometric parameters (Å, º) top
S1—C11.663 (2)C11—C161.382 (3)
C1—N11.349 (3)C12—C131.398 (4)
C1—N21.363 (3)C12—H120.9300
N1—C111.434 (3)C13—C141.356 (4)
N1—H10.821 (19)C13—H130.9300
N2—C21.457 (3)C14—C151.364 (4)
N2—H20.891 (19)C14—H140.9300
C2—C31.532 (3)C15—C161.374 (3)
C2—P11.799 (2)C15—H150.9300
C2—H2010.9800C16—H160.9300
C3—C41.519 (3)C21—C261.362 (3)
C3—H3010.9700C21—C221.363 (3)
C3—H3020.9700C22—C231.371 (4)
C4—C511.510 (3)C22—H220.9300
C4—H4010.9700C23—C241.344 (5)
C4—H4020.9700C23—H230.9300
C51—C561.369 (4)C24—C251.374 (5)
C51—C521.374 (4)C24—H240.9300
C52—C531.373 (4)C25—C261.383 (4)
C52—H520.9300C25—H250.9300
C53—C541.354 (4)C26—H260.9300
C53—H530.9300C31—C361.3750 (18)
C54—C551.375 (4)C31—C321.374 (4)
C54—H540.9300C32—C331.383 (5)
C55—C561.378 (4)C32—H320.9300
C55—H550.9300C33—C341.380 (5)
C56—H560.9300C33—H330.9300
P1—O11.4680 (15)C34—C351.378 (5)
P1—O31.5691 (17)C34—H340.9300
P1—O21.5740 (16)C35—C361.380 (5)
O2—C211.415 (3)C35—H350.9300
O3—C311.388 (3)C36—H360.9300
C11—C121.364 (3)
N1—C1—N2112.47 (19)C12—C11—N1119.5 (2)
N1—C1—S1124.00 (17)C16—C11—N1120.0 (2)
N2—C1—S1123.53 (17)C11—C12—C13119.3 (3)
C1—N1—C11125.1 (2)C11—C12—H12120.3
C1—N1—H1114.3 (17)C13—C12—H12120.3
C11—N1—H1118.3 (17)C14—C13—C12119.8 (3)
C1—N2—C2124.18 (19)C14—C13—H13120.1
C1—N2—H2116.4 (15)C12—C13—H13120.1
C2—N2—H2118.2 (15)C13—C14—C15120.8 (3)
N2—C2—C3112.88 (19)C13—C14—H14119.6
N2—C2—P1106.59 (14)C15—C14—H14119.6
C3—C2—P1114.31 (15)C14—C15—C16120.1 (3)
N2—C2—H201107.6C14—C15—H15120.0
C3—C2—H201107.6C16—C15—H15120.0
P1—C2—H201107.6C15—C16—C11119.6 (3)
C4—C3—C2111.93 (19)C15—C16—H16120.2
C4—C3—H301109.2C11—C16—H16120.2
C2—C3—H301109.2C26—C21—C22121.7 (2)
C4—C3—H302109.2C26—C21—O2119.8 (2)
C2—C3—H302109.2C22—C21—O2118.4 (2)
H301—C3—H302107.9C21—C22—C23118.8 (3)
C51—C4—C3113.3 (2)C21—C22—H22120.6
C51—C4—H401108.9C23—C22—H22120.6
C3—C4—H401108.9C24—C23—C22120.6 (3)
C51—C4—H402108.9C24—C23—H23119.7
C3—C4—H402108.9C22—C23—H23119.7
H401—C4—H402107.7C23—C24—C25120.6 (3)
C56—C51—C52117.8 (3)C23—C24—H24119.7
C56—C51—C4120.7 (3)C25—C24—H24119.7
C52—C51—C4121.5 (3)C24—C25—C26119.5 (3)
C53—C52—C51121.0 (3)C24—C25—H25120.2
C53—C52—H52119.5C26—C25—H25120.2
C51—C52—H52119.5C21—C26—C25118.7 (3)
C54—C53—C52121.0 (3)C21—C26—H26120.6
C54—C53—H53119.5C25—C26—H26120.6
C52—C53—H53119.5C36—C31—C32120.9 (2)
C53—C54—C55118.9 (3)C36—C31—O3120.1 (2)
C53—C54—H54120.6C32—C31—O3118.7 (2)
C55—C54—H54120.6C31—C32—C33118.9 (3)
C54—C55—C56120.0 (3)C31—C32—H32120.5
C54—C55—H55120.0C33—C32—H32120.5
C56—C55—H55120.0C34—C33—C32120.5 (3)
C51—C56—C55121.3 (3)C34—C33—H33119.7
C51—C56—H56119.3C32—C33—H33119.7
C55—C56—H56119.3C35—C34—C33120.0 (3)
O1—P1—O3114.03 (9)C35—C34—H34120.0
O1—P1—O2115.74 (9)C33—C34—H34120.0
O3—P1—O2103.91 (10)C34—C35—C36119.7 (3)
O1—P1—C2114.59 (10)C34—C35—H35120.1
O3—P1—C2105.48 (10)C36—C35—H35120.1
O2—P1—C2101.63 (9)C31—C36—C35119.9 (3)
C21—O2—P1122.72 (14)C31—C36—H36120.0
C31—O3—P1126.81 (15)C35—C36—H36120.0
C12—C11—C16120.4 (2)
N2—C1—N1—C11175.4 (2)C1—N1—C11—C12115.1 (3)
S1—C1—N1—C114.5 (4)C1—N1—C11—C1668.2 (3)
N1—C1—N2—C2170.9 (2)C16—C11—C12—C130.8 (4)
S1—C1—N2—C29.0 (3)N1—C11—C12—C13177.5 (2)
C1—N2—C2—C3117.7 (2)C11—C12—C13—C140.8 (5)
C1—N2—C2—P1116.0 (2)C12—C13—C14—C150.8 (5)
N2—C2—C3—C462.1 (3)C13—C14—C15—C160.9 (5)
P1—C2—C3—C4175.80 (19)C14—C15—C16—C111.0 (4)
C2—C3—C4—C51174.0 (2)C12—C11—C16—C150.9 (4)
C3—C4—C51—C5685.6 (3)N1—C11—C16—C15177.6 (2)
C3—C4—C51—C5296.3 (3)P1—O2—C21—C2697.4 (3)
C56—C51—C52—C530.4 (4)P1—O2—C21—C2286.1 (3)
C4—C51—C52—C53178.6 (3)C26—C21—C22—C230.6 (4)
C51—C52—C53—C541.0 (5)O2—C21—C22—C23177.0 (2)
C52—C53—C54—C552.0 (5)C21—C22—C23—C241.2 (5)
C53—C54—C55—C562.5 (6)C22—C23—C24—C251.4 (6)
C52—C51—C56—C551.0 (4)C23—C24—C25—C261.1 (5)
C4—C51—C56—C55179.2 (3)C22—C21—C26—C250.2 (4)
C54—C55—C56—C512.1 (5)O2—C21—C26—C25176.6 (2)
N2—C2—P1—O151.62 (18)C24—C25—C26—C210.4 (5)
C3—C2—P1—O173.82 (19)P1—O3—C31—C3680.9 (3)
N2—C2—P1—O374.64 (16)P1—O3—C31—C32105.2 (3)
C3—C2—P1—O3159.92 (16)C36—C31—C32—C331.2 (5)
N2—C2—P1—O2177.20 (14)O3—C31—C32—C33175.0 (3)
C3—C2—P1—O251.76 (19)C31—C32—C33—C340.2 (6)
O1—P1—O2—C2144.1 (2)C32—C33—C34—C350.4 (6)
O3—P1—O2—C2181.70 (19)C33—C34—C35—C360.1 (6)
C2—P1—O2—C21168.93 (19)C32—C31—C36—C351.4 (5)
O1—P1—O3—C319.8 (2)O3—C31—C36—C35175.2 (3)
O2—P1—O3—C31136.67 (18)C34—C35—C36—C310.8 (6)
C2—P1—O3—C31116.82 (19)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.82 (2)2.06 (2)2.861 (2)163 (2)
N2—H2···O1i0.89 (2)2.14 (2)2.967 (2)153 (2)
Symmetry code: (i) x, y, z.
(II) diphenyl [1-(3-phenylthioureido)benzyl]phosphonate top
Crystal data top
C26H23N2O3PSZ = 2
Mr = 474.49F(000) = 496
Triclinic, P1Dx = 1.319 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54178 Å
a = 9.953 (1) ÅCell parameters from 22 reflections
b = 10.046 (1) Åθ = 22.6–29.5°
c = 12.701 (1) ŵ = 2.09 mm1
α = 96.66 (1)°T = 293 K
β = 104.45 (1)°Plate, colourless
γ = 99.84 (1)°0.2 × 0.2 × 0.1 mm
V = 1194.8 (2) Å3
Data collection top
AFC5S Rigaku
diffractometer
2147 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.019
Graphite monochromatorθmax = 67.5°, θmin = 3.6°
ω scansh = 1111
Absorption correction: analytical
(De Meulenaer & Tompa, 1965)
k = 1112
Tmin = 0.675, Tmax = 0.836l = 1515
4431 measured reflections3 standard reflections every 150 reflections
4169 independent reflections intensity decay: <2%
Refinement top
Refinement on F2Secondary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.038H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.090 [1.00000exp(3.00(sinθ/λ)2)]/ [σ2(Fo2) + 0.0000*P + (0.029P)2]
where P = 0.33333Fo2 + 0.66667Fc2
S = 1.00(Δ/σ)max < 0.001
4169 reflectionsΔρmax = 0.19 e Å3
307 parametersΔρmin = 0.23 e Å3
8 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0060 (3)
Crystal data top
C26H23N2O3PSγ = 99.84 (1)°
Mr = 474.49V = 1194.8 (2) Å3
Triclinic, P1Z = 2
a = 9.953 (1) ÅCu Kα radiation
b = 10.046 (1) ŵ = 2.09 mm1
c = 12.701 (1) ÅT = 293 K
α = 96.66 (1)°0.2 × 0.2 × 0.1 mm
β = 104.45 (1)°
Data collection top
AFC5S Rigaku
diffractometer
2147 reflections with I > 2σ(I)
Absorption correction: analytical
(De Meulenaer & Tompa, 1965)
Rint = 0.019
Tmin = 0.675, Tmax = 0.8363 standard reflections every 150 reflections
4431 measured reflections intensity decay: <2%
4169 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0388 restraints
wR(F2) = 0.090H atoms treated by a mixture of independent and constrained refinement
S = 1.00Δρmax = 0.19 e Å3
4169 reflectionsΔρmin = 0.23 e Å3
307 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
S10.42318 (8)0.35393 (8)0.18474 (6)0.0552 (2)
C10.2577 (3)0.2655 (3)0.1562 (2)0.0434 (7)
N10.1930 (3)0.2320 (3)0.23379 (18)0.0532 (6)
H10.117 (3)0.170 (3)0.206 (2)0.086 (12)*
N20.1737 (3)0.2185 (3)0.05246 (18)0.0515 (6)
H20.096 (3)0.167 (3)0.046 (2)0.081 (12)*
C20.2215 (3)0.2261 (3)0.0465 (2)0.0479 (7)
H2010.32430.26100.02160.057*
C410.1596 (3)0.3245 (3)0.1180 (2)0.0488 (7)
C420.2302 (4)0.3774 (3)0.1895 (2)0.0681 (9)
H420.31260.34910.19550.082*
C430.1817 (4)0.4708 (4)0.2518 (3)0.0806 (11)
H430.23110.50520.29940.097*
C440.0609 (4)0.5134 (4)0.2442 (3)0.0809 (11)
H440.02750.57650.28670.097*
C450.0106 (4)0.4630 (4)0.1739 (3)0.0956 (13)
H450.09250.49250.16790.115*
C460.0386 (3)0.3676 (4)0.1112 (3)0.0773 (10)
H460.01150.33280.06410.093*
P10.19360 (8)0.05058 (8)0.11229 (6)0.0506 (2)
O10.05553 (19)0.03446 (19)0.11845 (14)0.0566 (5)
O20.2266 (2)0.06605 (19)0.22583 (14)0.0612 (6)
O30.3242 (2)0.0014 (2)0.04599 (16)0.0637 (6)
C110.2629 (3)0.2483 (3)0.3487 (2)0.0521 (7)
C120.2855 (4)0.1331 (4)0.3931 (3)0.0753 (10)
H120.25920.04740.34860.090*
C130.3482 (4)0.1469 (5)0.5051 (3)0.1023 (15)
H130.36420.06970.53610.123*
C140.3869 (4)0.2723 (6)0.5703 (3)0.1088 (18)
H140.42840.28020.64560.131*
C150.3648 (4)0.3861 (5)0.5256 (3)0.0952 (13)
H150.39220.47180.57020.114*
C160.3015 (3)0.3744 (3)0.4136 (2)0.0693 (9)
H160.28540.45180.38290.083*
C210.2082 (3)0.0483 (3)0.3075 (2)0.0548 (8)
C220.0815 (4)0.0869 (4)0.3868 (3)0.0732 (10)
H220.00750.04260.38400.088*
C230.0654 (4)0.1934 (4)0.4717 (3)0.0915 (12)
H230.01990.22100.52670.110*
C240.1753 (5)0.2579 (4)0.4745 (3)0.0959 (13)
H240.16440.32910.53170.115*
C250.3000 (4)0.2188 (4)0.3944 (3)0.0837 (11)
H250.37380.26350.39720.100*
C260.3183 (3)0.1131 (3)0.3088 (2)0.0656 (9)
H260.40340.08670.25330.079*
C310.3225 (3)0.1048 (3)0.0186 (2)0.0526 (7)
C320.3441 (4)0.2300 (3)0.0224 (3)0.0755 (10)
H320.35020.24810.09440.091*
C330.3566 (4)0.3286 (3)0.0448 (2)0.0800 (11)
H330.37130.41330.01760.096*
C340.3475 (3)0.3036 (3)0.1515 (2)0.0736 (10)
H340.35560.37060.19620.088*
C350.3262 (5)0.1772 (3)0.1907 (3)0.1026 (14)
H350.32040.15910.26270.123*
C360.3132 (4)0.0769 (3)0.1250 (2)0.0889 (12)
H360.29840.00780.15210.107*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
S10.0522 (5)0.0564 (5)0.0503 (4)0.0032 (4)0.0088 (4)0.0050 (4)
C10.0455 (17)0.0445 (16)0.0377 (14)0.0113 (13)0.0058 (12)0.0066 (12)
N10.0537 (16)0.0625 (17)0.0371 (13)0.0002 (14)0.0104 (12)0.0054 (12)
N20.0492 (16)0.0641 (17)0.0366 (13)0.0042 (14)0.0093 (12)0.0063 (12)
C20.0482 (17)0.0558 (18)0.0387 (15)0.0091 (14)0.0113 (13)0.0077 (13)
C410.0521 (18)0.0516 (18)0.0406 (15)0.0092 (15)0.0105 (13)0.0064 (13)
C420.080 (2)0.072 (2)0.068 (2)0.0296 (19)0.0318 (18)0.0279 (19)
C430.105 (3)0.080 (3)0.076 (2)0.030 (2)0.042 (2)0.037 (2)
C440.090 (3)0.083 (3)0.073 (2)0.029 (2)0.014 (2)0.031 (2)
C450.082 (3)0.118 (4)0.116 (3)0.052 (3)0.039 (2)0.064 (3)
C460.071 (2)0.097 (3)0.083 (2)0.031 (2)0.0315 (19)0.047 (2)
P10.0520 (5)0.0547 (5)0.0442 (4)0.0090 (4)0.0133 (4)0.0068 (4)
O10.0473 (12)0.0625 (13)0.0517 (12)0.0036 (10)0.0121 (9)0.0023 (10)
O20.0854 (15)0.0561 (13)0.0467 (11)0.0119 (11)0.0302 (11)0.0043 (10)
O30.0494 (12)0.0654 (14)0.0813 (15)0.0161 (11)0.0154 (10)0.0314 (12)
C110.0557 (18)0.062 (2)0.0370 (15)0.0095 (16)0.0124 (13)0.0078 (14)
C120.098 (3)0.079 (2)0.062 (2)0.031 (2)0.030 (2)0.0263 (19)
C130.109 (3)0.155 (5)0.071 (3)0.060 (3)0.035 (3)0.061 (3)
C140.084 (3)0.200 (6)0.044 (2)0.034 (4)0.014 (2)0.028 (3)
C150.095 (3)0.123 (4)0.049 (2)0.002 (3)0.015 (2)0.015 (2)
C160.080 (2)0.072 (2)0.0486 (18)0.0083 (19)0.0137 (17)0.0002 (17)
C210.067 (2)0.0546 (19)0.0465 (17)0.0156 (17)0.0210 (15)0.0068 (15)
C220.067 (2)0.085 (3)0.066 (2)0.022 (2)0.0147 (18)0.005 (2)
C230.089 (3)0.099 (3)0.065 (2)0.007 (2)0.000 (2)0.004 (2)
C240.137 (4)0.080 (3)0.066 (2)0.029 (3)0.025 (3)0.008 (2)
C250.109 (3)0.083 (3)0.078 (3)0.048 (2)0.039 (2)0.017 (2)
C260.073 (2)0.073 (2)0.0565 (19)0.0268 (19)0.0201 (17)0.0126 (17)
C310.0459 (17)0.0489 (19)0.0618 (19)0.0108 (14)0.0109 (14)0.0122 (15)
C320.097 (3)0.060 (2)0.072 (2)0.025 (2)0.026 (2)0.0058 (19)
C330.094 (3)0.050 (2)0.092 (3)0.0206 (19)0.016 (2)0.008 (2)
C340.077 (2)0.060 (2)0.079 (2)0.0158 (19)0.008 (2)0.0211 (19)
C350.173 (4)0.084 (3)0.068 (2)0.061 (3)0.036 (3)0.025 (2)
C360.150 (4)0.064 (2)0.064 (2)0.053 (2)0.028 (2)0.0175 (19)
Geometric parameters (Å, º) top
S1—C11.662 (3)C13—C141.362 (5)
C1—N11.349 (3)C13—H130.9300
C1—N21.352 (3)C14—C151.361 (5)
N1—C111.429 (3)C14—H140.9300
N1—H10.86 (2)C15—C161.387 (4)
N2—C21.456 (3)C15—H150.9300
N2—H20.84 (2)C16—H160.9300
C2—C411.522 (3)C21—C221.365 (4)
C2—P11.806 (3)C21—C261.370 (4)
C2—H2010.9800C22—C231.386 (4)
C41—C461.367 (4)C22—H220.9300
C41—C421.380 (4)C23—C241.369 (5)
C42—C431.369 (4)C23—H230.9300
C42—H420.9300C24—C251.356 (5)
C43—C441.365 (4)C24—H240.9300
C43—H430.9300C25—C261.382 (4)
C44—C451.363 (4)C25—H250.9300
C44—H440.9300C26—H260.9300
C45—C461.391 (4)C31—C361.377 (4)
C45—H450.9300C31—C321.377 (4)
C46—H460.9300C32—C331.382 (4)
P1—O11.4677 (19)C32—H320.9300
P1—O31.5680 (19)C33—C341.378 (4)
P1—O21.5757 (18)C33—H330.9300
O2—C211.410 (3)C34—C351.380 (5)
O3—C311.397 (3)C34—H340.9300
C11—C161.365 (4)C35—C361.383 (4)
C11—C121.373 (4)C35—H350.9300
C12—C131.383 (4)C36—H360.9300
C12—H120.9300
N1—C1—N2112.7 (2)C14—C13—H13119.6
N1—C1—S1123.7 (2)C12—C13—H13119.6
N2—C1—S1123.5 (2)C15—C14—C13120.1 (4)
C1—N1—C11124.6 (2)C15—C14—H14119.9
C1—N1—H1112 (2)C13—C14—H14119.9
C11—N1—H1119 (2)C14—C15—C16120.0 (4)
C1—N2—C2124.2 (3)C14—C15—H15120.0
C1—N2—H2117 (2)C16—C15—H15120.0
C2—N2—H2118 (2)C11—C16—C15119.5 (3)
N2—C2—C41114.5 (2)C11—C16—H16120.2
N2—C2—P1105.27 (19)C15—C16—H16120.2
C41—C2—P1116.62 (17)C22—C21—C26121.9 (3)
N2—C2—H201106.6C22—C21—O2118.2 (3)
C41—C2—H201106.6C26—C21—O2119.8 (3)
P1—C2—H201106.6C21—C22—C23118.7 (3)
C46—C41—C42118.0 (3)C21—C22—H22120.6
C46—C41—C2122.4 (3)C23—C22—H22120.6
C42—C41—C2119.5 (3)C24—C23—C22119.9 (3)
C43—C42—C41121.5 (3)C24—C23—H23120.0
C43—C42—H42119.3C22—C23—H23120.0
C41—C42—H42119.3C25—C24—C23120.5 (4)
C44—C43—C42120.1 (3)C25—C24—H24119.8
C44—C43—H43120.0C23—C24—H24119.8
C42—C43—H43120.0C24—C25—C26120.7 (4)
C45—C44—C43119.6 (3)C24—C25—H25119.7
C45—C44—H44120.2C26—C25—H25119.7
C43—C44—H44120.2C21—C26—C25118.3 (3)
C44—C45—C46120.1 (3)C21—C26—H26120.8
C44—C45—H45119.9C25—C26—H26120.8
C46—C45—H45119.9C36—C31—C32121.1 (3)
C41—C46—C45120.7 (3)C36—C31—O3120.0 (2)
C41—C46—H46119.6C32—C31—O3118.6 (2)
C45—C46—H46119.6C31—C32—C33119.1 (3)
O1—P1—O3114.26 (11)C31—C32—H32120.5
O1—P1—O2116.08 (11)C33—C32—H32120.5
O3—P1—O2103.52 (11)C34—C33—C32121.2 (3)
O1—P1—C2114.70 (12)C34—C33—H33119.4
O3—P1—C2103.79 (12)C32—C33—H33119.4
O2—P1—C2102.91 (11)C33—C34—C35118.6 (3)
C21—O2—P1121.86 (17)C33—C34—H34120.7
C31—O3—P1127.39 (17)C35—C34—H34120.7
C16—C11—C12120.9 (3)C34—C35—C36121.3 (3)
C16—C11—N1120.9 (3)C34—C35—H35119.3
C12—C11—N1118.2 (3)C36—C35—H35119.3
C11—C12—C13118.7 (4)C31—C36—C35118.8 (3)
C11—C12—H12120.6C31—C36—H36120.6
C13—C12—H12120.6C35—C36—H36120.6
C14—C13—C12120.8 (4)
N2—C1—N1—C11169.3 (3)C1—N1—C11—C1676.1 (4)
S1—C1—N1—C1110.3 (4)C1—N1—C11—C12106.3 (3)
N1—C1—N2—C2172.7 (3)C16—C11—C12—C130.0 (5)
S1—C1—N2—C26.9 (4)N1—C11—C12—C13177.5 (3)
C1—N2—C2—C41111.4 (3)C11—C12—C13—C140.0 (6)
C1—N2—C2—P1119.1 (3)C12—C13—C14—C150.4 (7)
N2—C2—C41—C4620.0 (4)C13—C14—C15—C160.7 (6)
P1—C2—C41—C46103.6 (3)C12—C11—C16—C150.2 (5)
N2—C2—C41—C42157.3 (3)N1—C11—C16—C15177.8 (3)
P1—C2—C41—C4279.2 (3)C14—C15—C16—C110.6 (6)
C46—C41—C42—C430.2 (5)P1—O2—C21—C2292.8 (3)
C2—C41—C42—C43177.1 (3)P1—O2—C21—C2690.3 (3)
C41—C42—C43—C440.1 (5)C26—C21—C22—C231.0 (5)
C42—C43—C44—C450.3 (6)O2—C21—C22—C23175.8 (3)
C43—C44—C45—C460.7 (6)C21—C22—C23—C240.2 (6)
C42—C41—C46—C450.6 (5)C22—C23—C24—C250.3 (6)
C2—C41—C46—C45176.7 (3)C23—C24—C25—C260.1 (6)
C44—C45—C46—C410.8 (6)C22—C21—C26—C251.2 (5)
N2—C2—P1—O145.4 (2)O2—C21—C26—C25175.5 (3)
C41—C2—P1—O182.7 (2)C24—C25—C26—C210.6 (5)
N2—C2—P1—O379.93 (19)P1—O3—C31—C3681.4 (3)
C41—C2—P1—O3151.9 (2)P1—O3—C31—C32104.7 (3)
N2—C2—P1—O2172.42 (17)C36—C31—C32—C330.1 (5)
C41—C2—P1—O244.3 (2)O3—C31—C32—C33173.7 (3)
O1—P1—O2—C2149.5 (3)C31—C32—C33—C340.1 (5)
O3—P1—O2—C2176.6 (2)C32—C33—C34—C350.3 (6)
C2—P1—O2—C21175.6 (2)C33—C34—C35—C360.3 (6)
O1—P1—O3—C319.7 (3)C32—C31—C36—C350.1 (5)
O2—P1—O3—C31136.8 (2)O3—C31—C36—C35173.6 (3)
C2—P1—O3—C31116.0 (2)C34—C35—C36—C310.3 (6)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.86 (2)1.98 (2)2.836 (3)170 (3)
N2—H2···O1i0.84 (2)2.27 (3)3.033 (3)151 (3)
Symmetry code: (i) x, y, z.
(III) diphenyl [2,2-dimethyl-1-(3-phenylthioureido)propyl]phosphonate top
Crystal data top
C24H27N2O3PSF(000) = 960
Mr = 454.51Dx = 1.256 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 10.688 (3) Åθ = 22.7–28.8°
b = 9.888 (2) ŵ = 2.04 mm1
c = 22.961 (2) ÅT = 293 K
β = 97.790 (1)°Prism, colourless
V = 2404.2 (9) Å30.5 × 0.5 × 0.45 mm
Z = 4
Data collection top
AFC5S Rigaku
diffractometer
3100 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.015
Graphite monochromatorθmax = 67.5°, θmin = 3.9°
ω scansh = 1212
Absorption correction: analytical
(De Meulenaer & Tompa, 1965)
k = 811
Tmin = 0.427, Tmax = 0.464l = 2727
4439 measured reflections3 standard reflections every 150 reflections
4193 independent reflections intensity decay: <2%
Refinement top
Refinement on F2Secondary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.045H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.137 w = 1/[σ2(Fo2) + (0.0821P)2 + 0.0698P]
where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
4193 reflectionsΔρmax = 0.22 e Å3
289 parametersΔρmin = 0.37 e Å3
2 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0108 (6)
Crystal data top
C24H27N2O3PSV = 2404.2 (9) Å3
Mr = 454.51Z = 4
Monoclinic, P21/cCu Kα radiation
a = 10.688 (3) ŵ = 2.04 mm1
b = 9.888 (2) ÅT = 293 K
c = 22.961 (2) Å0.5 × 0.5 × 0.45 mm
β = 97.790 (1)°
Data collection top
AFC5S Rigaku
diffractometer
3100 reflections with I > 2σ(I)
Absorption correction: analytical
(De Meulenaer & Tompa, 1965)
Rint = 0.015
Tmin = 0.427, Tmax = 0.4643 standard reflections every 150 reflections
4439 measured reflections intensity decay: <2%
4193 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0452 restraints
wR(F2) = 0.137H atoms treated by a mixture of independent and constrained refinement
S = 1.06Δρmax = 0.22 e Å3
4193 reflectionsΔρmin = 0.37 e Å3
289 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
S10.17928 (6)0.49548 (6)0.62637 (3)0.0770 (2)
C10.3152 (2)0.5341 (2)0.60363 (8)0.0586 (5)
N10.3889 (2)0.6401 (2)0.62376 (8)0.0699 (5)
H10.4647 (12)0.642 (2)0.6158 (11)0.076 (8)*
N20.36643 (19)0.46038 (19)0.56292 (8)0.0651 (5)
H20.4402 (12)0.487 (2)0.5564 (9)0.061 (6)*
C20.3140 (2)0.3335 (2)0.53824 (9)0.0652 (6)
H2010.23300.32000.55290.078*
C30.3976 (3)0.2084 (3)0.55747 (11)0.0802 (7)
C40.5148 (3)0.2015 (3)0.52621 (14)0.1040 (10)
H4010.56760.12820.54210.156*
H4020.56070.28500.53200.156*
H4030.48960.18710.48490.156*
C50.4382 (4)0.2178 (3)0.62412 (14)0.1215 (13)
H5010.49340.29390.63260.182*
H5020.48170.13650.63780.182*
H5030.36490.22890.64360.182*
C60.3178 (3)0.0799 (3)0.54434 (16)0.1045 (10)
H6010.24030.08860.56090.157*
H6020.36390.00300.56140.157*
H6030.29920.06770.50260.157*
P10.27923 (6)0.37191 (6)0.46068 (2)0.0621 (2)
O10.38380 (14)0.42621 (17)0.43252 (7)0.0715 (4)
O20.22051 (16)0.23709 (15)0.43225 (7)0.0731 (4)
O30.16046 (15)0.46780 (15)0.45700 (7)0.0702 (4)
C110.3580 (2)0.7455 (2)0.66184 (10)0.0673 (6)
C120.2480 (3)0.8163 (3)0.65081 (14)0.0951 (9)
H120.18890.79360.61870.114*
C130.2240 (4)0.9214 (3)0.68708 (19)0.1168 (12)
H130.14770.96760.67970.140*
C140.3091 (4)0.9587 (3)0.73316 (16)0.1100 (11)
H140.29141.02930.75750.132*
C150.4209 (4)0.8918 (3)0.74348 (14)0.1235 (13)
H150.48120.91800.77450.148*
C160.4456 (3)0.7832 (3)0.70750 (12)0.1001 (9)
H160.52180.73690.71490.120*
C210.1867 (3)0.2258 (2)0.37060 (10)0.0705 (6)
C220.2550 (3)0.1430 (3)0.34030 (12)0.0946 (9)
H220.32550.09760.35900.114*
C230.2165 (4)0.1276 (4)0.27988 (15)0.1134 (11)
H230.26220.07140.25810.136*
C240.1141 (4)0.1932 (4)0.25290 (14)0.1096 (10)
H240.08990.18260.21270.132*
C250.0467 (3)0.2742 (4)0.28439 (14)0.1132 (11)
H250.02390.31920.26570.136*
C260.0816 (3)0.2909 (3)0.34405 (12)0.0950 (9)
H260.03430.34560.36580.114*
C310.1481 (2)0.6040 (2)0.44149 (11)0.0689 (6)
C320.1780 (3)0.6484 (3)0.38863 (13)0.0936 (9)
H320.21290.59030.36330.112*
C330.1541 (4)0.7841 (4)0.37403 (18)0.1240 (14)
H330.17370.81870.33870.149*
C340.1005 (4)0.8666 (4)0.4132 (3)0.1406 (17)
H340.08380.95670.40350.169*
C350.0724 (4)0.8185 (4)0.4650 (2)0.1260 (13)
H350.03800.87570.49070.151*
C360.0946 (3)0.6854 (3)0.47959 (13)0.0883 (8)
H360.07360.65100.51470.106*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
S10.0839 (5)0.0743 (4)0.0793 (4)0.0083 (3)0.0346 (3)0.0059 (3)
C10.0676 (13)0.0567 (11)0.0533 (11)0.0027 (10)0.0144 (9)0.0011 (9)
N10.0722 (13)0.0682 (12)0.0736 (12)0.0074 (10)0.0252 (10)0.0187 (9)
N20.0685 (12)0.0645 (11)0.0650 (11)0.0105 (9)0.0194 (9)0.0140 (9)
C20.0771 (14)0.0553 (12)0.0656 (13)0.0041 (11)0.0185 (11)0.0098 (10)
C30.0995 (19)0.0645 (14)0.0756 (15)0.0098 (14)0.0079 (13)0.0048 (12)
C40.097 (2)0.092 (2)0.121 (2)0.0274 (18)0.0086 (18)0.0111 (18)
C50.169 (3)0.103 (2)0.0840 (19)0.035 (2)0.012 (2)0.0042 (18)
C60.132 (3)0.0607 (15)0.121 (2)0.0038 (17)0.018 (2)0.0073 (15)
P10.0689 (4)0.0570 (3)0.0622 (3)0.0041 (3)0.0156 (3)0.0081 (2)
O10.0700 (10)0.0784 (10)0.0697 (9)0.0079 (8)0.0229 (8)0.0067 (8)
O20.0911 (11)0.0609 (9)0.0673 (9)0.0085 (8)0.0115 (8)0.0124 (7)
O30.0711 (10)0.0563 (8)0.0865 (10)0.0016 (7)0.0220 (8)0.0029 (7)
C110.0885 (16)0.0573 (12)0.0592 (12)0.0021 (12)0.0208 (11)0.0064 (9)
C120.096 (2)0.0744 (16)0.114 (2)0.0073 (16)0.0114 (17)0.0185 (15)
C130.111 (3)0.080 (2)0.164 (4)0.0141 (19)0.035 (2)0.030 (2)
C140.163 (3)0.0755 (18)0.101 (2)0.010 (2)0.051 (2)0.0159 (17)
C150.191 (4)0.094 (2)0.0776 (19)0.014 (3)0.010 (2)0.0262 (16)
C160.126 (2)0.0842 (18)0.0835 (18)0.0202 (18)0.0085 (17)0.0219 (15)
C210.0836 (16)0.0635 (13)0.0657 (13)0.0082 (12)0.0146 (12)0.0148 (11)
C220.111 (2)0.0879 (19)0.0840 (18)0.0190 (17)0.0109 (16)0.0212 (15)
C230.136 (3)0.117 (3)0.088 (2)0.024 (2)0.020 (2)0.0365 (19)
C240.118 (3)0.128 (3)0.0808 (19)0.000 (2)0.0068 (18)0.0278 (19)
C250.103 (2)0.138 (3)0.092 (2)0.016 (2)0.0092 (17)0.031 (2)
C260.0858 (18)0.114 (2)0.0839 (17)0.0072 (17)0.0059 (14)0.0325 (17)
C310.0689 (14)0.0594 (13)0.0754 (15)0.0075 (11)0.0011 (11)0.0026 (11)
C320.100 (2)0.093 (2)0.0843 (17)0.0124 (17)0.0016 (15)0.0190 (15)
C330.124 (3)0.117 (3)0.121 (3)0.028 (2)0.020 (2)0.050 (2)
C340.126 (3)0.080 (2)0.202 (5)0.002 (2)0.028 (3)0.039 (3)
C350.129 (3)0.0659 (18)0.180 (4)0.013 (2)0.008 (3)0.007 (2)
C360.0911 (19)0.0656 (15)0.108 (2)0.0069 (14)0.0146 (15)0.0118 (14)
Geometric parameters (Å, º) top
S1—C11.654 (2)C12—H120.9300
C1—N11.354 (3)C13—C141.350 (5)
C1—N21.358 (3)C13—H130.9300
N1—C111.427 (3)C14—C151.359 (5)
N1—H10.854 (10)C14—H140.9300
N2—C21.457 (3)C15—C161.401 (4)
N2—H20.864 (10)C15—H150.9300
C2—C31.554 (3)C16—H160.9300
C2—P11.809 (2)C21—C221.350 (3)
C2—H2010.9800C21—C261.365 (4)
C3—C41.527 (4)C22—C231.401 (4)
C3—C51.536 (4)C22—H220.9300
C3—C61.538 (4)C23—C241.348 (5)
C4—H4010.9600C23—H230.9300
C4—H4020.9600C24—C251.350 (4)
C4—H4030.9600C24—H240.9300
C5—H5010.9600C25—C261.380 (4)
C5—H5020.9600C25—H250.9300
C5—H5030.9600C26—H260.9300
C6—H6010.9600C31—C321.368 (3)
C6—H6020.9600C31—C361.370 (3)
C6—H6030.9600C32—C331.398 (5)
P1—O11.4668 (15)C32—H320.9300
P1—O21.5768 (15)C33—C341.394 (6)
P1—O31.5774 (16)C33—H330.9300
O2—C211.417 (3)C34—C351.352 (6)
O3—C311.395 (3)C34—H340.9300
C11—C161.359 (4)C35—C361.371 (4)
C11—C121.362 (4)C35—H350.9300
C12—C131.378 (4)C36—H360.9300
N1—C1—N2112.37 (19)C11—C12—H12119.9
N1—C1—S1124.48 (16)C13—C12—H12119.9
N2—C1—S1123.14 (17)C14—C13—C12121.3 (3)
C1—N1—C11127.0 (2)C14—C13—H13119.4
C1—N1—H1117.9 (17)C12—C13—H13119.4
C11—N1—H1114.8 (17)C13—C14—C15119.1 (3)
C1—N2—C2124.09 (19)C13—C14—H14120.4
C1—N2—H2114.6 (15)C15—C14—H14120.4
C2—N2—H2120.7 (15)C14—C15—C16120.1 (3)
N2—C2—C3113.50 (19)C14—C15—H15120.0
N2—C2—P1102.66 (15)C16—C15—H15120.0
C3—C2—P1118.69 (15)C11—C16—C15120.0 (3)
N2—C2—H201107.1C11—C16—H16120.0
C3—C2—H201107.1C15—C16—H16120.0
P1—C2—H201107.1C22—C21—C26121.7 (3)
C4—C3—C5109.4 (3)C22—C21—O2118.7 (2)
C4—C3—C6109.9 (2)C26—C21—O2119.5 (2)
C5—C3—C6108.6 (3)C21—C22—C23118.0 (3)
C4—C3—C2112.2 (2)C21—C22—H22121.0
C5—C3—C2108.0 (2)C23—C22—H22121.0
C6—C3—C2108.6 (2)C24—C23—C22120.9 (3)
C3—C4—H401109.5C24—C23—H23119.5
C3—C4—H402109.5C22—C23—H23119.5
H401—C4—H402109.5C23—C24—C25119.8 (3)
C3—C4—H403109.5C23—C24—H24120.1
H401—C4—H403109.5C25—C24—H24120.1
H402—C4—H403109.5C24—C25—C26120.7 (3)
C3—C5—H501109.5C24—C25—H25119.6
C3—C5—H502109.5C26—C25—H25119.6
H501—C5—H502109.5C21—C26—C25118.8 (3)
C3—C5—H503109.5C21—C26—H26120.6
H501—C5—H503109.5C25—C26—H26120.6
H502—C5—H503109.5C32—C31—C36123.1 (3)
C3—C6—H601109.5C32—C31—O3120.7 (2)
C3—C6—H602109.5C36—C31—O3116.0 (2)
H601—C6—H602109.5C31—C32—C33117.6 (3)
C3—C6—H603109.5C31—C32—H32121.2
H601—C6—H603109.5C33—C32—H32121.2
H602—C6—H603109.5C34—C33—C32119.0 (4)
O1—P1—O2114.28 (9)C34—C33—H33120.5
O1—P1—O3114.33 (9)C32—C33—H33120.5
O2—P1—O3102.34 (9)C35—C34—C33121.4 (4)
O1—P1—C2116.32 (11)C35—C34—H34119.3
O2—P1—C2104.31 (9)C33—C34—H34119.3
O3—P1—C2103.62 (10)C34—C35—C36120.1 (4)
C21—O2—P1120.91 (14)C34—C35—H35119.9
C31—O3—P1129.93 (15)C36—C35—H35119.9
C16—C11—C12119.3 (2)C31—C36—C35118.7 (3)
C16—C11—N1118.7 (2)C31—C36—H36120.6
C12—C11—N1121.8 (2)C35—C36—H36120.6
C11—C12—C13120.1 (3)
N2—C1—N1—C11173.0 (2)N1—C11—C12—C13177.0 (3)
S1—C1—N1—C118.1 (3)C11—C12—C13—C141.5 (5)
N1—C1—N2—C2173.6 (2)C12—C13—C14—C150.6 (6)
S1—C1—N2—C25.3 (3)C13—C14—C15—C161.7 (6)
C1—N2—C2—C3111.5 (3)C12—C11—C16—C151.5 (5)
C1—N2—C2—P1119.2 (2)N1—C11—C16—C15176.1 (3)
N2—C2—C3—C474.6 (3)C14—C15—C16—C110.6 (5)
P1—C2—C3—C446.1 (3)P1—O2—C21—C22110.7 (2)
N2—C2—C3—C546.1 (3)P1—O2—C21—C2673.7 (3)
P1—C2—C3—C5166.8 (2)C26—C21—C22—C231.4 (5)
N2—C2—C3—C6163.8 (2)O2—C21—C22—C23176.8 (3)
P1—C2—C3—C675.6 (3)C21—C22—C23—C240.2 (5)
N2—C2—P1—O153.79 (18)C22—C23—C24—C250.5 (6)
C3—C2—P1—O172.3 (2)C23—C24—C25—C260.1 (6)
N2—C2—P1—O2179.35 (14)C22—C21—C26—C251.8 (5)
C3—C2—P1—O254.6 (2)O2—C21—C26—C25177.2 (3)
N2—C2—P1—O372.57 (16)C24—C25—C26—C211.1 (5)
C3—C2—P1—O3161.37 (18)P1—O3—C31—C3255.8 (3)
O1—P1—O2—C2148.7 (2)P1—O3—C31—C36129.7 (2)
O3—P1—O2—C2175.47 (19)C36—C31—C32—C331.2 (4)
C2—P1—O2—C21176.79 (18)O3—C31—C32—C33175.2 (3)
O1—P1—O3—C3113.7 (2)C31—C32—C33—C340.6 (5)
O2—P1—O3—C31137.80 (19)C32—C33—C34—C350.6 (6)
C2—P1—O3—C31113.9 (2)C33—C34—C35—C361.1 (6)
C1—N1—C11—C16134.8 (3)C32—C31—C36—C351.6 (4)
C1—N1—C11—C1250.7 (4)O3—C31—C36—C35175.9 (3)
C16—C11—C12—C132.6 (5)C34—C35—C36—C311.5 (5)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.85 (1)2.19 (2)2.976 (3)153 (1)
N2—H2···O1i0.86 (1)2.05 (1)2.884 (3)162 (1)
Symmetry code: (i) x+1, y+1, z+1.

Experimental details

(I)(II)(III)
Crystal data
Chemical formulaC28H27N2O3PSC26H23N2O3PSC24H27N2O3PS
Mr502.55474.49454.51
Crystal system, space groupTriclinic, P1Triclinic, P1Monoclinic, P21/c
Temperature (K)293293293
a, b, c (Å)9.951 (1), 12.201 (1), 11.844 (1)9.953 (1), 10.046 (1), 12.701 (1)10.688 (3), 9.888 (2), 22.961 (2)
α, β, γ (°)100.40 (1), 102.90 (1), 102.90 (1)96.66 (1), 104.45 (1), 99.84 (1)90, 97.790 (1), 90
V3)1325.6 (2)1194.8 (2)2404.2 (9)
Z224
Radiation typeCu KαCu KαCu Kα
µ (mm1)1.912.092.04
Crystal size (mm)0.50 × 0.30 × 0.200.2 × 0.2 × 0.10.5 × 0.5 × 0.45
Data collection
DiffractometerAFC5S Rigaku
diffractometer
AFC5S Rigaku
diffractometer
AFC5S Rigaku
diffractometer
Absorption correctionAnalytical
(De Meulenaer & Tompa, 1965)
Analytical
(De Meulenaer & Tompa, 1965)
Analytical
(De Meulenaer & Tompa, 1965)
Tmin, Tmax0.448, 0.7010.675, 0.8360.427, 0.464
No. of measured, independent and
observed [I > 2σ(I)] reflections
4878, 4637, 3089 4431, 4169, 2147 4439, 4193, 3100
Rint0.0300.0190.015
(sin θ/λ)max1)0.5990.5990.599
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.041, 0.119, 0.94 0.038, 0.090, 1.00 0.045, 0.137, 1.06
No. of reflections463741694193
No. of parameters325307289
No. of restraints882
H-atom treatmentH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.21, 0.280.19, 0.230.22, 0.37

Computer programs: MSC/AFC Diffractometer Control Software (1989a), TEXSAN (1989b), SHELXS86 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), PLATON (Spek, 1998), PARST97 (Nardelli, 1996).

Selected geometric parameters (Å, º) for (I) top
S1—C11.663 (2)C2—P11.799 (2)
C1—N11.349 (3)P1—O11.4680 (15)
C1—N21.363 (3)P1—O31.5691 (17)
N1—C111.434 (3)P1—O21.5740 (16)
N2—C21.457 (3)
N1—C1—N2112.47 (19)O1—P1—O2115.74 (9)
N1—C1—S1124.00 (17)O3—P1—O2103.91 (10)
N2—C1—S1123.53 (17)O1—P1—C2114.59 (10)
C1—N2—C2124.18 (19)O3—P1—C2105.48 (10)
O1—P1—O3114.03 (9)O2—P1—C2101.63 (9)
S1—C1—N1—C114.5 (4)S1—C1—N2—C29.0 (3)
Hydrogen-bond geometry (Å, º) for (I) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.82 (2)2.06 (2)2.861 (2)163 (2)
N2—H2···O1i0.89 (2)2.14 (2)2.967 (2)153 (2)
Symmetry code: (i) x, y, z.
Selected geometric parameters (Å, º) for (II) top
S1—C11.662 (3)C2—P11.806 (3)
C1—N11.349 (3)P1—O11.4677 (19)
C1—N21.352 (3)P1—O31.5680 (19)
N2—C21.456 (3)P1—O21.5757 (18)
N1—C1—N2112.7 (2)O1—P1—O2116.08 (11)
N1—C1—S1123.7 (2)O3—P1—O2103.52 (11)
N2—C1—S1123.5 (2)O1—P1—C2114.70 (12)
C1—N2—C2124.2 (3)O3—P1—C2103.79 (12)
O1—P1—O3114.26 (11)O2—P1—C2102.91 (11)
Hydrogen-bond geometry (Å, º) for (II) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.86 (2)1.98 (2)2.836 (3)170 (3)
N2—H2···O1i0.84 (2)2.27 (3)3.033 (3)151 (3)
Symmetry code: (i) x, y, z.
Selected geometric parameters (Å, º) for (III) top
S1—C11.654 (2)C1—N21.358 (3)
C1—N11.354 (3)N2—C21.457 (3)
N1—C1—N2112.37 (19)O1—P1—O3114.33 (9)
N1—C1—S1124.48 (16)O2—P1—O3102.34 (9)
N2—C1—S1123.14 (17)O1—P1—C2116.32 (11)
C1—N2—C2124.09 (19)O2—P1—C2104.31 (9)
O1—P1—O2114.28 (9)O3—P1—C2103.62 (10)
Hydrogen-bond geometry (Å, º) for (III) top
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.85 (1)2.19 (2)2.976 (3)153 (1)
N2—H2···O1i0.86 (1)2.05 (1)2.884 (3)162 (1)
Symmetry code: (i) x+1, y+1, z+1.
 

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