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Iodo-oxyapatite [pentadecacalcium iodide oxide nonaphosphate, Ca15(PO4)9IO] was synthesized by a flux method and the structure was solved from single-crystal X-ray data. The crystal structure was refined in the space group P63/m [a = 9.567 (1), c = 20.754 (2) Å and Z = 2] to wR on F of 0.0459. Iodo-oxyapatite has a typical hexagonal apatite structure but the unit cell is tripled along the hexad owing to ordering of the iodide and oxide ions along this direction.

Supporting information

cif

Crystallographic Information File (CIF)
Contains datablock iodo

sft

Structure factor file (SHELXL table format)
Supplementary material

Computing details top

Figures top
[Figure 1]
[Figure 2]
[Figure 3]
[Figure 4]
(iodo) top
Crystal data top
[Ca15(PO4)9IO]Dx = 3.227 Mg m3
Mr = 1598.8Mo Kα radiation, λ = 0.7107 Å
Hexagonal, P63/mCell parameters from 5000 reflections
a = 9.567 (1) Åθ = 2.0–23.9°
c = 20.754 (2) ŵ = 3.89 mm1
V = 1645.07 Å3T = 293 K
Z = 2Hexagonal rod, colourless
F(000) = 15680.18 × 0.03 × 0.03 mm
Data collection top
STOE IPDS
diffractometer
419 reflections with I > 2σ(I)
phi rotation scansRint = 0.084
Absorption correction: numerical from crystal shape
?
θmax = 23.9°, θmin = 2.0°
Tmin = 0.859, Tmax = 0.917h = 80
878 measured reflectionsk = 010
878 independent reflectionsl = 023
Refinement top
Refinement on F72 parameters
R[F2 > 2σ(F2)] = 0.045w = 1/(σ2(F) + 0.0004F2)
wR(F2) = 0.055(Δ/σ)max = 0.0001
S = 1.01Δρmax = 2.50 e Å3
878 reflectionsΔρmin = 2.48 e Å3
Crystal data top
[Ca15(PO4)9IO]Z = 2
Mr = 1598.8Mo Kα radiation
Hexagonal, P63/mµ = 3.89 mm1
a = 9.567 (1) ÅT = 293 K
c = 20.754 (2) Å0.18 × 0.03 × 0.03 mm
V = 1645.07 Å3
Data collection top
STOE IPDS
diffractometer
878 independent reflections
Absorption correction: numerical from crystal shape
?
419 reflections with I > 2σ(I)
Tmin = 0.859, Tmax = 0.917Rint = 0.084
878 measured reflectionsθmax = 23.9°
Refinement top
R[F2 > 2σ(F2)] = 0.04572 parameters
wR(F2) = 0.055Δρmax = 2.50 e Å3
S = 1.01Δρmin = 2.48 e Å3
878 reflections
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
O(11)0.473 (1)0.590 (1)0.250.028 (3)
O(12)0.4599 (9)0.5848 (8)0.5930 (5)0.028 (3)
O(21)0.481 (1)0.328 (1)0.250.010 (2)
O(22)0.4886 (8)0.3353 (8)0.5830 (4)0.010 (2)
O(31)0.268 (1)0.360 (1)0.1901 (5)0.034 (2)
O(32)0.2831 (9)0.375 (1)0.5186 (4)0.034 (2)
O(33)0.245 (1)0.318 (1)0.8634 (5)0.034 (2)
P(11)0.3731 (5)0.4048 (5)0.250.0063 (7)
P(12)0.3690 (3)0.3999 (3)0.5826 (2)0.0063 (7)
Ca(11)0.3333330.6666670.1665 (2)0.0103 (5)
Ca(12)0.3333330.6666670.5008 (3)0.0103 (5)
Ca(13)0.3333330.6666670.8297 (2)0.0103 (5)
Ca(21)0.2435 (5)0.0041 (4)0.250.028 (2)
Ca(22)0.2765 (3)0.0144 (3)0.5859 (1)0.018 (1)
I(11)0000.0211 (9)0.7 (1)
I(12)000.1716 (6)0.0211 (9)0.174 (3)
O(41)000.237 (3)0.0211 (9)0.35 (2)
O(42)000.384 (6)0.0211 (9)0.14 (2)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O(11)0.017 (3)0.010 (3)0.060 (6)0.008 (2)00
O(12)0.017 (3)0.010 (3)0.060 (6)0.008 (2)00
O(21)0.012 (2)0.015 (2)0.011 (3)0.011 (2)00
O(22)0.012 (2)0.015 (2)0.011 (3)0.011 (2)00
O(31)0.029 (2)0.055 (3)0.034 (3)0.033 (3)0.021 (2)0.029 (3)
O(32)0.029 (2)0.055 (3)0.034 (3)0.033 (3)0.021 (2)0.029 (3)
O(33)0.029 (2)0.055 (3)0.034 (3)0.033 (3)0.021 (2)0.029 (3)
P(11)0.0063 (9)0.0078 (9)0.008 (1)0.0056 (7)00
P(12)0.0063 (9)0.0078 (9)0.008 (1)0.0056 (7)00
Ca(11)0.0114 (6)0.0114 (6)0.008 (1)0.0057 (3)00
Ca(12)0.0114 (6)0.0114 (6)0.008 (1)0.0057 (3)00
Ca(13)0.0114 (6)0.0114 (6)0.008 (1)0.0057 (3)00
Ca(21)0.052 (3)0.010 (2)0.017 (2)0.012 (2)00
Ca(22)0.025 (1)0.015 (1)0.012 (1)0.008 (1)0.001 (1)0.002 (1)
I(11)0.0033 (8)0.0033 (8)0.057 (2)0.0016 (4)00
I(12)0.0033 (8)0.0033 (8)0.057 (2)0.0016 (4)00
O(41)0.0033 (8)0.0033 (8)0.057 (2)0.0016 (4)00
O(42)0.0033 (8)0.0033 (8)0.057 (2)0.0016 (4)00
Geometric parameters (Å, º) top
P(11)—O(11)1.53 (1)Ca(12)—O(32)viii2.61 (1)
P(11)—O(21)1.54 (2)Ca(13)—O(12)xii2.37 (1)
P(11)—O(31)1.52 (1)Ca(13)—O(12)ii2.37 (1)
P(11)—O(31)i1.52 (1)Ca(13)—O(12)xiii2.37 (1)
P(12)—O(12)1.547 (7)Ca(13)—O(21)ix2.41 (1)
P(12)—O(22)1.548 (9)Ca(13)—O(21)xiv2.407 (8)
P(12)—O(32)1.52 (1)Ca(13)—O(21)x2.41 (1)
P(12)—O(33)ii1.53 (1)Ca(21)—O(11)xv2.39 (2)
Ca(11)—O(11)2.51 (1)Ca(21)—O(21)2.781 (9)
Ca(11)—O(11)iii2.51 (1)Ca(21)—O(31)xvi2.577 (9)
Ca(11)—O(11)iv2.51 (1)Ca(21)—O(31)xvii2.577 (9)
Ca(11)—O(22)v2.438 (9)Ca(21)—O(33)xviii2.45 (1)
Ca(11)—O(22)vi2.438 (9)Ca(21)—O(33)xix2.45 (1)
Ca(11)—O(22)vii2.44 (1)Ca(21)—I(12)2.825 (8)
Ca(11)—O(31)2.72 (1)Ca(21)—I(12)xvi2.825 (8)
Ca(11)—O(31)iv2.718 (9)Ca(21)—O(41)2.326 (8)
Ca(11)—O(31)viii2.72 (2)Ca(21)—O(41)xvi2.326 (8)
Ca(12)—O(12)2.59 (1)Ca(22)—O(12)xv2.31 (1)
Ca(12)—O(12)iv2.59 (1)Ca(22)—O(22)2.705 (6)
Ca(12)—O(12)viii2.59 (1)Ca(22)—O(31)xx2.30 (1)
Ca(12)—O(22)ix2.44 (1)Ca(22)—O(32)xviii2.334 (9)
Ca(12)—O(22)x2.44 (1)Ca(22)—O(32)xvii2.853 (8)
Ca(12)—O(22)xi2.441 (9)Ca(22)—O(33)xxi2.495 (9)
Ca(12)—O(32)2.61 (1)Ca(22)—O(42)xxii2.65 (3)
Ca(12)—O(32)iv2.609 (8)
O(11)—P(11)—O(21)111.7 (7)O(32)—Ca(12)—O(32)viii118.0 (3)
O(11)—P(11)—O(31)105.5 (5)O(32)iv—Ca(12)—O(32)118.0 (4)
O(11)—P(11)—O(31)i105.5 (5)O(32)iv—Ca(12)—O(32)viii118.0 (4)
O(21)—P(11)—O(31)112.1 (5)O(32)viii—Ca(12)—O(32)118.0 (3)
O(21)—P(11)—O(31)i112.1 (5)O(32)viii—Ca(12)—O(32)iv118.0 (4)
O(31)—P(11)—O(31)i109.6 (6)O(12)xii—Ca(13)—O(12)ii79.1 (4)
O(31)i—P(11)—O(31)109.6 (6)O(12)xii—Ca(13)—O(12)xiii79.1 (3)
O(12)—P(12)—O(22)110.5 (4)O(12)xii—Ca(13)—O(21)ix154.1 (3)
O(12)—P(12)—O(32)104.6 (6)O(12)xii—Ca(13)—O(21)xiv88.8 (3)
O(12)—P(12)—O(33)ii109.3 (6)O(12)xii—Ca(13)—O(21)x121.2 (4)
O(22)—P(12)—O(32)113.1 (6)O(12)ii—Ca(13)—O(12)xii79.1 (4)
O(22)—P(12)—O(33)ii109.3 (6)O(12)ii—Ca(13)—O(12)xiii79.1 (4)
O(32)—P(12)—O(33)ii109.9 (5)O(12)ii—Ca(13)—O(21)ix88.8 (3)
O(11)—Ca(11)—O(11)iii77.7 (4)O(12)ii—Ca(13)—O(21)xiv121.2 (4)
O(11)—Ca(11)—O(11)iv77.7 (4)O(12)ii—Ca(13)—O(21)x154.1 (3)
O(11)—Ca(11)—O(22)v125.4 (3)O(12)xiii—Ca(13)—O(12)xii79.1 (3)
O(11)—Ca(11)—O(22)vi90.7 (3)O(12)xiii—Ca(13)—O(12)ii79.1 (4)
O(11)—Ca(11)—O(22)vii151.6 (3)O(12)xiii—Ca(13)—O(21)ix121.2 (3)
O(11)—Ca(11)—O(31)55.2 (3)O(12)xiii—Ca(13)—O(21)xiv154.1 (5)
O(11)—Ca(11)—O(31)iv67.5 (4)O(12)xiii—Ca(13)—O(21)x88.8 (4)
O(11)—Ca(11)—O(31)viii125.4 (4)O(21)ix—Ca(13)—O(21)xiv78.0 (4)
O(11)iii—Ca(11)—O(11)77.7 (4)O(21)ix—Ca(13)—O(21)x78.0 (4)
O(11)iii—Ca(11)—O(11)iv77.7 (3)O(21)xiv—Ca(13)—O(21)ix78.0 (4)
O(11)iii—Ca(11)—O(22)v90.7 (3)O(21)xiv—Ca(13)—O(21)x78.0 (4)
O(11)iii—Ca(11)—O(22)vi151.6 (4)O(21)x—Ca(13)—O(21)ix78.0 (4)
O(11)iii—Ca(11)—O(22)vii125.4 (4)O(21)x—Ca(13)—O(21)xiv78.0 (4)
O(11)iii—Ca(11)—O(31)67.5 (4)O(11)xv—Ca(21)—O(21)99.6 (4)
O(11)iii—Ca(11)—O(31)iv125.4 (3)O(11)xv—Ca(21)—O(31)xvi71.6 (4)
O(11)iii—Ca(11)—O(31)viii55.2 (5)O(11)xv—Ca(21)—O(31)xvii71.6 (4)
O(11)iv—Ca(11)—O(11)77.7 (4)O(11)xv—Ca(21)—O(33)xviii87.4 (4)
O(11)iv—Ca(11)—O(11)iii77.7 (3)O(11)xv—Ca(21)—O(33)xix87.4 (4)
O(11)iv—Ca(11)—O(22)v151.6 (4)O(11)xv—Ca(21)—I(12)137.5 (2)
O(11)iv—Ca(11)—O(22)vi125.4 (3)O(11)xv—Ca(21)—I(12)xvi137.5 (2)
O(11)iv—Ca(11)—O(22)vii90.7 (4)O(11)xv—Ca(21)—O(41)153.6 (4)
O(11)iv—Ca(11)—O(31)125.4 (4)O(11)xv—Ca(21)—O(41)xvi153.6 (4)
O(11)iv—Ca(11)—O(31)iv55.2 (4)O(21)—Ca(21)—O(31)xvi149.2 (3)
O(11)iv—Ca(11)—O(31)viii67.5 (4)O(21)—Ca(21)—O(31)xvii149.2 (3)
O(22)v—Ca(11)—O(22)vi75.0 (3)O(21)—Ca(21)—O(33)xviii74.6 (3)
O(22)v—Ca(11)—O(22)vii75.0 (3)O(21)—Ca(21)—O(33)xix74.6 (3)
O(22)v—Ca(11)—O(31)70.9 (3)O(21)—Ca(21)—I(12)103.0 (3)
O(22)v—Ca(11)—O(31)iv143.7 (3)O(21)—Ca(21)—I(12)xvi103.0 (3)
O(22)v—Ca(11)—O(31)viii84.5 (3)O(21)—Ca(21)—O(41)105.9 (3)
O(22)vi—Ca(11)—O(22)v75.0 (3)O(21)—Ca(21)—O(41)xvi105.9 (3)
O(22)vi—Ca(11)—O(22)vii75.0 (3)O(31)xvi—Ca(21)—O(31)xvii57.7 (3)
O(22)vi—Ca(11)—O(31)84.5 (3)O(31)xvi—Ca(21)—O(33)xviii132.4 (4)
O(22)vi—Ca(11)—O(31)iv70.9 (3)O(31)xvi—Ca(21)—O(33)xix75.5 (4)
O(22)vi—Ca(11)—O(31)viii143.7 (3)O(31)xvi—Ca(21)—I(12)102.8 (3)
O(22)vii—Ca(11)—O(22)v75.0 (3)O(31)xvi—Ca(21)—I(12)xvi70.5 (3)
O(22)vii—Ca(11)—O(22)vi75.0 (3)O(31)xvi—Ca(21)—O(41)89.3 (8)
O(22)vii—Ca(11)—O(31)143.7 (3)O(31)xvi—Ca(21)—O(41)xvi82.9 (8)
O(22)vii—Ca(11)—O(31)iv84.5 (3)O(31)xvii—Ca(21)—O(31)xvi57.7 (3)
O(22)vii—Ca(11)—O(31)viii70.9 (3)O(31)xvii—Ca(21)—O(33)xviii75.5 (4)
O(31)—Ca(11)—O(31)iv116.8 (4)O(31)xvii—Ca(21)—O(33)xix132.4 (4)
O(31)—Ca(11)—O(31)viii116.8 (3)O(31)xvii—Ca(21)—I(12)70.5 (3)
O(31)iv—Ca(11)—O(31)116.8 (4)O(31)xvii—Ca(21)—I(12)xvi102.8 (3)
O(31)iv—Ca(11)—O(31)viii116.8 (4)O(31)xvii—Ca(21)—O(41)82.9 (8)
O(31)viii—Ca(11)—O(31)116.8 (3)O(31)xvii—Ca(21)—O(41)xvi89.3 (8)
O(31)viii—Ca(11)—O(31)iv116.8 (4)O(33)xviii—Ca(21)—O(33)xix147.4 (3)
O(12)—Ca(12)—O(12)iv71.3 (3)O(33)xviii—Ca(21)—I(12)65.1 (3)
O(12)—Ca(12)—O(12)viii71.3 (3)O(33)xviii—Ca(21)—I(12)xvi133.1 (4)
O(12)—Ca(12)—O(22)ix95.2 (3)O(33)xviii—Ca(21)—O(41)93 (1)
O(12)—Ca(12)—O(22)x154.3 (2)O(33)xviii—Ca(21)—O(41)xvi106 (1)
O(12)—Ca(12)—O(22)xi126.1 (3)O(33)xix—Ca(21)—O(33)xviii147.4 (3)
O(12)—Ca(12)—O(32)55.6 (3)O(33)xix—Ca(21)—I(12)133.1 (4)
O(12)—Ca(12)—O(32)iv73.0 (3)O(33)xix—Ca(21)—I(12)xvi65.1 (3)
O(12)—Ca(12)—O(32)viii122.8 (3)O(33)xix—Ca(21)—O(41)106 (1)
O(12)iv—Ca(12)—O(12)71.3 (3)O(33)xix—Ca(21)—O(41)xvi93 (1)
O(12)iv—Ca(12)—O(12)viii71.3 (3)I(12)—Ca(21)—I(12)xvi70.3 (3)
O(12)iv—Ca(12)—O(22)ix126.1 (2)I(12)—Ca(21)—O(41)29 (1)
O(12)iv—Ca(12)—O(22)x95.2 (3)I(12)—Ca(21)—O(41)xvi42 (1)
O(12)iv—Ca(12)—O(22)xi154.3 (3)I(12)xvi—Ca(21)—I(12)70.3 (3)
O(12)iv—Ca(12)—O(32)122.8 (4)I(12)xvi—Ca(21)—O(41)42 (1)
O(12)iv—Ca(12)—O(32)iv55.6 (3)I(12)xvi—Ca(21)—O(41)xvi29 (1)
O(12)iv—Ca(12)—O(32)viii73.0 (3)O(41)—Ca(21)—O(41)xvi13 (2)
O(12)viii—Ca(12)—O(12)71.3 (3)O(41)xvi—Ca(21)—O(41)13 (2)
O(12)viii—Ca(12)—O(12)iv71.3 (3)O(12)xv—Ca(22)—O(22)109.6 (3)
O(12)viii—Ca(12)—O(22)ix154.3 (3)O(12)xv—Ca(22)—O(31)xx85.4 (5)
O(12)viii—Ca(12)—O(22)x126.1 (3)O(12)xv—Ca(22)—O(32)xviii89.2 (4)
O(12)viii—Ca(12)—O(22)xi95.2 (3)O(12)xv—Ca(22)—O(32)xvii72.7 (4)
O(12)viii—Ca(12)—O(32)73.0 (3)O(12)xv—Ca(22)—O(33)xxi77.7 (4)
O(12)viii—Ca(12)—O(32)iv122.8 (3)O(12)xv—Ca(22)—O(42)xxii143 (1)
O(12)viii—Ca(12)—O(32)viii55.6 (3)O(22)—Ca(22)—O(31)xx73.2 (3)
O(22)ix—Ca(12)—O(22)x74.9 (3)O(22)—Ca(22)—O(32)xviii70.3 (3)
O(22)ix—Ca(12)—O(22)xi74.9 (3)O(22)—Ca(22)—O(32)xvii149.3 (3)
O(22)ix—Ca(12)—O(32)81.3 (3)O(22)—Ca(22)—O(33)xxi155.2 (3)
O(22)ix—Ca(12)—O(32)iv70.5 (3)O(22)—Ca(22)—O(42)xxii103.1 (2)
O(22)ix—Ca(12)—O(32)viii142.0 (4)O(31)xx—Ca(22)—O(32)xviii138.7 (3)
O(22)x—Ca(12)—O(22)ix74.9 (3)O(31)xx—Ca(22)—O(32)xvii136.6 (4)
O(22)x—Ca(12)—O(22)xi74.9 (3)O(31)xx—Ca(22)—O(33)xxi84.2 (4)
O(22)x—Ca(12)—O(32)142.0 (4)O(31)xx—Ca(22)—O(42)xxii89 (2)
O(22)x—Ca(12)—O(32)iv81.3 (3)O(32)xviii—Ca(22)—O(32)xvii79.2 (3)
O(22)x—Ca(12)—O(32)viii70.5 (3)O(32)xviii—Ca(22)—O(33)xxi134.3 (4)
O(22)xi—Ca(12)—O(22)ix74.9 (3)O(32)xviii—Ca(22)—O(42)xxii118 (2)
O(22)xi—Ca(12)—O(22)x74.9 (3)O(32)xvii—Ca(22)—O(32)xviii79.2 (3)
O(22)xi—Ca(12)—O(32)70.5 (3)O(32)xvii—Ca(22)—O(33)xxi55.1 (3)
O(22)xi—Ca(12)—O(32)iv142.0 (3)O(32)xvii—Ca(22)—O(42)xxii88 (1)
O(22)xi—Ca(12)—O(32)viii81.3 (3)O(33)xxi—Ca(22)—O(42)xxii66 (1)
O(32)—Ca(12)—O(32)iv118.0 (4)
Symmetry codes: (i) x, y, z+1/2; (ii) x, y, z+3/2; (iii) x+y, x+1, z+1/2; (iv) y+1, xy+1, z; (v) xy, x, z1/2; (vi) x+1, y+1, z1/2; (vii) y, x+y+1, z1/2; (viii) x+y, x+1, z; (ix) x+1, y+1, z+1; (x) y, x+y+1, z+1; (xi) xy, x, z+1; (xii) x+y, x+1, z+3/2; (xiii) y+1, xy+1, z+3/2; (xiv) xy, x, z+1/2; (xv) y+1, xy, z; (xvi) x+y, x, z+1/2; (xvii) x+y, x, z; (xviii) y, x+y, z+1; (xix) y, x+y, z1/2; (xx) y, x+y, z+1/2; (xxi) x+y, x, z+3/2; (xxii) x, y, z+1.

Experimental details

Crystal data
Chemical formula[Ca15(PO4)9IO]
Mr1598.8
Crystal system, space groupHexagonal, P63/m
Temperature (K)293
a, c (Å)9.567 (1), 20.754 (2)
V3)1645.07
Z2
Radiation typeMo Kα
µ (mm1)3.89
Crystal size (mm)0.18 × 0.03 × 0.03
Data collection
DiffractometerSTOE IPDS
diffractometer
Absorption correctionNumerical from crystal shape
Tmin, Tmax0.859, 0.917
No. of measured, independent and
observed [I > 2σ(I)] reflections
878, 878, 419
Rint0.084
θmax (°)23.9
(sin θ/λ)max1)0.570
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.045, 0.055, 1.01
No. of reflections878
No. of parameters72
No. of restraints?
Δρmax, Δρmin (e Å3)2.50, 2.48

 

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