An X-ray crystallographic study reveals a short N—N bond in the title compound, C
13H
14N
2O
4. The molecular packing is mainly driven by strong N—H
O=C hydrogen bonds, leading to
C(5) infinite chains, and by π–π stacking interactions between the phthalimide ring systems.
Supporting information
CCDC reference: 242300
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.003 Å
- R factor = 0.046
- wR factor = 0.129
- Data-to-parameter ratio = 14.1
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C1
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
1 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: COLLECT (Nonius, 1998); cell refinement: COLLECT; data reduction: HKL SUITE (Otwinoski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and WebLab ViewerPro 3.5 (MSI, 1999); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 1990).
Crystal data top
C13H14N2O4 | F(000) = 552 |
Mr = 262.26 | Dx = 1.296 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 10577 reflections |
a = 9.7050 (6) Å | θ = 3.4–25.4° |
b = 8.5290 (4) Å | µ = 0.10 mm−1 |
c = 16.312 (1) Å | T = 293 K |
β = 95.275 (3)° | Prism, colorless |
V = 1344.49 (13) Å3 | 0.2 × 0.1 × 0.1 mm |
Z = 4 | |
Data collection top
Nonius KappaCCD diffractometer | 1701 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.033 |
Graphite monochromator | θmax = 25.4°, θmin = 3.4° |
φ and ω scans | h = −11→11 |
11015 measured reflections | k = −10→10 |
2444 independent reflections | l = −19→19 |
Refinement top
Refinement on F2 | H-atom parameters constrained |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0577P)2 + 0.2922P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.046 | (Δ/σ)max < 0.001 |
wR(F2) = 0.129 | Δρmax = 0.20 e Å−3 |
S = 1.04 | Δρmin = −0.13 e Å−3 |
2444 reflections | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
173 parameters | Extinction coefficient: 0.044 (5) |
0 restraints | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.4357 (2) | 0.3969 (2) | 0.15605 (12) | 0.0606 (5) | |
C2 | 0.3752 (3) | 0.5502 (3) | 0.12290 (15) | 0.0808 (7) | |
H2A | 0.3487 | 0.6131 | 0.1677 | 0.121* | |
H2B | 0.2953 | 0.5294 | 0.0852 | 0.121* | |
H2C | 0.4431 | 0.6054 | 0.0948 | 0.121* | |
C3 | 0.4787 (3) | 0.2943 (3) | 0.08740 (15) | 0.0827 (7) | |
H3A | 0.4022 | 0.282 | 0.0463 | 0.124* | |
H3B | 0.5066 | 0.1935 | 0.1091 | 0.124* | |
H3C | 0.5547 | 0.3424 | 0.0632 | 0.124* | |
C4 | 0.5534 (3) | 0.4194 (3) | 0.22239 (16) | 0.0921 (8) | |
H4A | 0.5232 | 0.4849 | 0.2651 | 0.138* | |
H4B | 0.63 | 0.4682 | 0.1991 | 0.138* | |
H4C | 0.5817 | 0.3193 | 0.245 | 0.138* | |
O1 | 0.32387 (13) | 0.30144 (15) | 0.18812 (8) | 0.0603 (4) | |
C5 | 0.2605 (2) | 0.3501 (2) | 0.25251 (12) | 0.0579 (5) | |
O2 | 0.28040 (18) | 0.46698 (19) | 0.29248 (10) | 0.0830 (5) | |
N1 | 0.16120 (18) | 0.2415 (2) | 0.26612 (10) | 0.0639 (5) | |
H1 | 0.1469 | 0.1625 | 0.2337 | 0.077* | |
N2 | 0.08493 (16) | 0.26069 (19) | 0.33216 (10) | 0.0571 (5) | |
C6 | −0.0313 (2) | 0.3560 (2) | 0.33006 (12) | 0.0545 (5) | |
O3 | −0.07743 (17) | 0.42941 (18) | 0.27051 (9) | 0.0748 (5) | |
C7 | −0.0778 (2) | 0.3457 (2) | 0.41364 (12) | 0.0535 (5) | |
C8 | −0.1872 (2) | 0.4196 (3) | 0.44588 (14) | 0.0676 (6) | |
H8 | −0.246 | 0.4863 | 0.4141 | 0.081* | |
C9 | −0.2056 (3) | 0.3901 (3) | 0.52762 (16) | 0.0806 (8) | |
H9 | −0.2776 | 0.4392 | 0.5515 | 0.097* | |
C10 | −0.1196 (3) | 0.2898 (3) | 0.57418 (15) | 0.0844 (8) | |
H10 | −0.1359 | 0.2707 | 0.6286 | 0.101* | |
C11 | −0.0095 (3) | 0.2166 (3) | 0.54196 (14) | 0.0740 (7) | |
H11 | 0.0491 | 0.1493 | 0.5737 | 0.089* | |
C12 | 0.0101 (2) | 0.2474 (2) | 0.46067 (12) | 0.0549 (5) | |
C13 | 0.1194 (2) | 0.1924 (2) | 0.40982 (13) | 0.0585 (5) | |
O4 | 0.21798 (17) | 0.1090 (2) | 0.42608 (10) | 0.0854 (5) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0559 (12) | 0.0671 (13) | 0.0610 (12) | −0.0062 (10) | 0.0167 (10) | 0.0076 (10) |
C2 | 0.0952 (18) | 0.0745 (15) | 0.0742 (15) | 0.0013 (13) | 0.0151 (13) | 0.0103 (12) |
C3 | 0.0826 (17) | 0.0918 (17) | 0.0799 (16) | 0.0077 (13) | 0.0409 (13) | 0.0049 (13) |
C4 | 0.0707 (15) | 0.110 (2) | 0.0937 (18) | −0.0202 (14) | −0.0033 (14) | 0.0192 (15) |
O1 | 0.0622 (9) | 0.0641 (8) | 0.0583 (8) | −0.0084 (6) | 0.0246 (7) | −0.0107 (6) |
C5 | 0.0626 (13) | 0.0594 (12) | 0.0541 (11) | −0.0030 (10) | 0.0182 (10) | −0.0058 (10) |
O2 | 0.1049 (13) | 0.0725 (10) | 0.0767 (10) | −0.0236 (9) | 0.0360 (9) | −0.0277 (8) |
N1 | 0.0693 (11) | 0.0621 (10) | 0.0650 (11) | −0.0071 (9) | 0.0319 (9) | −0.0140 (8) |
N2 | 0.0585 (10) | 0.0619 (10) | 0.0536 (10) | 0.0058 (8) | 0.0197 (8) | 0.0020 (8) |
C6 | 0.0590 (12) | 0.0495 (10) | 0.0564 (12) | −0.0006 (9) | 0.0130 (10) | −0.0027 (10) |
O3 | 0.0899 (11) | 0.0728 (10) | 0.0624 (9) | 0.0177 (8) | 0.0111 (8) | 0.0093 (8) |
C7 | 0.0550 (11) | 0.0519 (11) | 0.0560 (11) | −0.0099 (9) | 0.0178 (9) | −0.0079 (9) |
C8 | 0.0616 (13) | 0.0700 (14) | 0.0746 (14) | −0.0074 (10) | 0.0255 (11) | −0.0149 (11) |
C9 | 0.0804 (17) | 0.0826 (16) | 0.0862 (18) | −0.0248 (14) | 0.0469 (15) | −0.0275 (14) |
C10 | 0.105 (2) | 0.0929 (18) | 0.0614 (14) | −0.0388 (16) | 0.0381 (15) | −0.0136 (14) |
C11 | 0.0900 (17) | 0.0761 (15) | 0.0567 (13) | −0.0211 (13) | 0.0121 (12) | 0.0047 (11) |
C12 | 0.0599 (12) | 0.0559 (11) | 0.0505 (11) | −0.0129 (9) | 0.0133 (9) | −0.0018 (9) |
C13 | 0.0553 (12) | 0.0568 (12) | 0.0635 (13) | −0.0035 (10) | 0.0066 (10) | 0.0001 (10) |
O4 | 0.0734 (11) | 0.0916 (11) | 0.0907 (12) | 0.0211 (9) | 0.0041 (9) | 0.0089 (9) |
Geometric parameters (Å, º) top
C1—O1 | 1.490 (2) | N1—H1 | 0.86 |
C1—C3 | 1.510 (3) | N2—C6 | 1.388 (2) |
C1—C4 | 1.512 (3) | N2—C13 | 1.407 (3) |
C1—C2 | 1.513 (3) | C6—O3 | 1.207 (2) |
C2—H2A | 0.96 | C6—C7 | 1.477 (3) |
C2—H2B | 0.96 | C7—C12 | 1.378 (3) |
C2—H2C | 0.96 | C7—C8 | 1.380 (3) |
C3—H3A | 0.96 | C8—C9 | 1.384 (3) |
C3—H3B | 0.96 | C8—H8 | 0.93 |
C3—H3C | 0.96 | C9—C10 | 1.375 (4) |
C4—H4A | 0.96 | C9—H9 | 0.93 |
C4—H4B | 0.96 | C10—C11 | 1.383 (4) |
C4—H4C | 0.96 | C10—H10 | 0.93 |
O1—C5 | 1.332 (2) | C11—C12 | 1.382 (3) |
C5—O2 | 1.197 (2) | C11—H11 | 0.93 |
C5—N1 | 1.369 (3) | C12—C13 | 1.482 (3) |
N1—N2 | 1.372 (2) | C13—O4 | 1.202 (2) |
| | | |
O1—C1—C3 | 101.77 (16) | C5—N1—H1 | 120.5 |
O1—C1—C4 | 110.17 (17) | N2—N1—H1 | 120.5 |
C3—C1—C4 | 111.2 (2) | N1—N2—C6 | 123.11 (16) |
O1—C1—C2 | 109.04 (17) | N1—N2—C13 | 123.86 (16) |
C3—C1—C2 | 111.13 (19) | C6—N2—C13 | 112.96 (16) |
C4—C1—C2 | 112.9 (2) | O3—C6—N2 | 124.34 (18) |
C1—C2—H2A | 109.5 | O3—C6—C7 | 130.67 (18) |
C1—C2—H2B | 109.5 | N2—C6—C7 | 104.99 (17) |
H2A—C2—H2B | 109.5 | C12—C7—C8 | 121.60 (18) |
C1—C2—H2C | 109.5 | C12—C7—C6 | 108.93 (17) |
H2A—C2—H2C | 109.5 | C8—C7—C6 | 129.5 (2) |
H2B—C2—H2C | 109.5 | C7—C8—C9 | 117.2 (2) |
C1—C3—H3A | 109.5 | C7—C8—H8 | 121.4 |
C1—C3—H3B | 109.5 | C9—C8—H8 | 121.4 |
H3A—C3—H3B | 109.5 | C10—C9—C8 | 121.3 (2) |
C1—C3—H3C | 109.5 | C10—C9—H9 | 119.4 |
H3A—C3—H3C | 109.5 | C8—C9—H9 | 119.4 |
H3B—C3—H3C | 109.5 | C9—C10—C11 | 121.5 (2) |
C1—C4—H4A | 109.5 | C9—C10—H10 | 119.2 |
C1—C4—H4B | 109.5 | C11—C10—H10 | 119.2 |
H4A—C4—H4B | 109.5 | C12—C11—C10 | 117.2 (2) |
C1—C4—H4C | 109.5 | C12—C11—H11 | 121.4 |
H4A—C4—H4C | 109.5 | C10—C11—H11 | 121.4 |
H4B—C4—H4C | 109.5 | C7—C12—C11 | 121.2 (2) |
C5—O1—C1 | 120.74 (15) | C7—C12—C13 | 108.62 (17) |
O2—C5—O1 | 128.76 (19) | C11—C12—C13 | 130.2 (2) |
O2—C5—N1 | 123.76 (18) | O4—C13—N2 | 124.22 (19) |
O1—C5—N1 | 107.47 (17) | O4—C13—C12 | 131.3 (2) |
C5—N1—N2 | 119.04 (16) | N2—C13—C12 | 104.46 (17) |
| | | |
C3—C1—O1—C5 | 177.78 (18) | C6—C7—C8—C9 | −178.89 (19) |
C4—C1—O1—C5 | 59.7 (2) | C7—C8—C9—C10 | −0.9 (3) |
C2—C1—O1—C5 | −64.7 (2) | C8—C9—C10—C11 | 1.4 (4) |
C1—O1—C5—O2 | −0.4 (3) | C9—C10—C11—C12 | −0.5 (3) |
C1—O1—C5—N1 | 178.36 (16) | C8—C7—C12—C11 | 1.2 (3) |
O2—C5—N1—N2 | −4.2 (3) | C6—C7—C12—C11 | 179.99 (17) |
O1—C5—N1—N2 | 176.89 (16) | C8—C7—C12—C13 | −177.60 (17) |
C5—N1—N2—C6 | 83.5 (2) | C6—C7—C12—C13 | 1.2 (2) |
C5—N1—N2—C13 | −93.4 (2) | C10—C11—C12—C7 | −0.7 (3) |
N1—N2—C6—O3 | 0.8 (3) | C10—C11—C12—C13 | 177.8 (2) |
C13—N2—C6—O3 | 178.05 (18) | N1—N2—C13—O4 | −0.9 (3) |
N1—N2—C6—C7 | −178.43 (16) | C6—N2—C13—O4 | −178.06 (19) |
C13—N2—C6—C7 | −1.2 (2) | N1—N2—C13—C12 | 179.10 (16) |
O3—C6—C7—C12 | −179.3 (2) | C6—N2—C13—C12 | 1.9 (2) |
N2—C6—C7—C12 | −0.1 (2) | C7—C12—C13—O4 | 178.1 (2) |
O3—C6—C7—C8 | −0.6 (4) | C11—C12—C13—O4 | −0.5 (4) |
N2—C6—C7—C8 | 178.63 (19) | C7—C12—C13—N2 | −1.9 (2) |
C12—C7—C8—C9 | −0.4 (3) | C11—C12—C13—N2 | 179.5 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O3i | 0.86 | 2.10 | 2.831 (2) | 143 |
Symmetry code: (i) −x, y−1/2, −z+1/2. |