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In the title compound, C13H14N2O2·H2O, the dihedral angle between the benzene and pyridinone rings is 74.86 (7)°. In the crystal structure, the mol­ecules are linked by a pair of O—H...O hydrogen bonds [O...O = 2.662 (2) Å], forming a centrosymmetric dimer. In addition, the mol­ecules are linked via O—H...O, O—H...N and N—H...O inter­molecular hydrogen bonds involving the water mol­ecules, and C—H...O inter­actions.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807018284/ci2360sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536807018284/ci2360Isup2.hkl
Contains datablock I

CCDC reference: 647617

Key indicators

  • Single-crystal X-ray study
  • T = 298 K
  • Mean [sigma](C-C) = 0.003 Å
  • R factor = 0.043
  • wR factor = 0.125
  • Data-to-parameter ratio = 12.6

checkCIF/PLATON results

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Alert level C PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ? PLAT420_ALERT_2_C D-H Without Acceptor N2 - H2A ... ?
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check

Comment top

A number of hydroxypyrones and hydroxypyridinones are being assessed or considered as orally effective chelators for treatment iron or aluminium overload (Burgess, 1993; Clevette et al., 1990). In our continuing research on the hydroxypyridinone (Lu et al., 2003), we present here the crystal structure of the title compound, (I).

Bond distances (Table 1) in compound (I) agree with those observed for the N-benzyl analogues (Burgess, Fawcett, Russell & Zaisheng, 1998;

Burgess, Fawcett, Russell & Waltham, 1998). The dihedral angle between the benzene and pyridinone rings is 74.86 (7)°.

Molecules of compound (I) are linked by a pair of O2—H2···O1(1 - x, -y, -z) hydrogen bonds into a centrosymmetric dimer (Fig. 1). This type of dimeric structure is commonly found in anhydrous or hydrous 3-hydroxypyridin-4-one (Xiao et al., 1992; Burgess et al., 1993; Burgess, Fawcett, Russell & Zaisheng, 1998; Burgess, Fawcett, Russell & Waltham, 1998 and 3-hydroxypyran-4-one compounds (Brown et al., 1995). In the crystal structure, there is a water molecule associated with each pyridinone molecule, which are linked through N2—H2B···O3 hydrogen bonds (Fig. 1). The water molecule links the O1 and N2 atoms of adjacent pyridinones through O—H···O and O—H···O hydrogen bonds, with O3···O1(x, 1 + y, 1 + z) and O3···N2(-x, 2 - y, 1 - z) distances of 2.857 (2) and 2.987 (3) Å, respectively. In addition, the molecules are linked by weak C—H···O contacts of ca C···O 3.3 Å, as previously observed for this type of compounds (Burgess et al., 1996; Burgess, Fawcett, Russell & Zaisheng, 1998; Burgess, Fawcett, Russell & Waltham, 1998).

Related literature top

O—H···O hydrogen-bonded dimer formation is observed in 3-hydroxypyridin-4-one and 3-hydroxypyran-4-one compounds (Xiao et al., 1992; Burgess et al., 1993; Burgess, Fawcett, Russell & Zaisheng, 1998; Burgess, Fawcett, Russell & Waltham, 1998; Brown et al., 1995). For related literature, see: Burgess (1993); Burgess et al. (1996); Chan et al. (1992); Clevette & Orvig (1990); Lu et al. (2003).

Experimental top

The title compound was prepared according to the literature method of Lu et al. (2003). Crystals suitable for X-ray analysis were obtained by slow evaporation of a methanol-water solution at room temperature after several weeks.

Refinement top

H atoms of amino group were located in a difference map and refined freely. The remaining H atoms were placed in calculated positions, with C—H = 0.93–0.97 Å and O—H = 0.82–0.85 Å, and included in the final cycles of refinement using a riding model, with Uiso(H) = 1.2Ueq(C) and 1.5Ueq(O).

Structure description top

A number of hydroxypyrones and hydroxypyridinones are being assessed or considered as orally effective chelators for treatment iron or aluminium overload (Burgess, 1993; Clevette et al., 1990). In our continuing research on the hydroxypyridinone (Lu et al., 2003), we present here the crystal structure of the title compound, (I).

Bond distances (Table 1) in compound (I) agree with those observed for the N-benzyl analogues (Burgess, Fawcett, Russell & Zaisheng, 1998;

Burgess, Fawcett, Russell & Waltham, 1998). The dihedral angle between the benzene and pyridinone rings is 74.86 (7)°.

Molecules of compound (I) are linked by a pair of O2—H2···O1(1 - x, -y, -z) hydrogen bonds into a centrosymmetric dimer (Fig. 1). This type of dimeric structure is commonly found in anhydrous or hydrous 3-hydroxypyridin-4-one (Xiao et al., 1992; Burgess et al., 1993; Burgess, Fawcett, Russell & Zaisheng, 1998; Burgess, Fawcett, Russell & Waltham, 1998 and 3-hydroxypyran-4-one compounds (Brown et al., 1995). In the crystal structure, there is a water molecule associated with each pyridinone molecule, which are linked through N2—H2B···O3 hydrogen bonds (Fig. 1). The water molecule links the O1 and N2 atoms of adjacent pyridinones through O—H···O and O—H···O hydrogen bonds, with O3···O1(x, 1 + y, 1 + z) and O3···N2(-x, 2 - y, 1 - z) distances of 2.857 (2) and 2.987 (3) Å, respectively. In addition, the molecules are linked by weak C—H···O contacts of ca C···O 3.3 Å, as previously observed for this type of compounds (Burgess et al., 1996; Burgess, Fawcett, Russell & Zaisheng, 1998; Burgess, Fawcett, Russell & Waltham, 1998).

O—H···O hydrogen-bonded dimer formation is observed in 3-hydroxypyridin-4-one and 3-hydroxypyran-4-one compounds (Xiao et al., 1992; Burgess et al., 1993; Burgess, Fawcett, Russell & Zaisheng, 1998; Burgess, Fawcett, Russell & Waltham, 1998; Brown et al., 1995). For related literature, see: Burgess (1993); Burgess et al. (1996); Chan et al. (1992); Clevette & Orvig (1990); Lu et al. (2003).

Computing details top

Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1999); software used to prepare material for publication: SHELXTL.

Figures top
[Figure 1] Fig. 1. A view of the hydrogen-bonded (dashed lines) dimer of (I). Displacement ellipsoids are drawn at the 30% probability level.
[Figure 2] Fig. 2. The packing diagram of (I). Hydrogen bonds are shown as dashed lines.
1-(4-Aminophenyl)-2-ethyl-3-hydroxy-1,4-dihydropyridin-4-one monohydrate top
Crystal data top
C13H14N2O2·H2OZ = 2
Mr = 248.28F(000) = 264
Triclinic, P1Dx = 1.331 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.8992 (14) ÅCell parameters from 1277 reflections
b = 8.0162 (15) Åθ = 2.9–27.8°
c = 11.4759 (19) ŵ = 0.10 mm1
α = 96.835 (2)°T = 298 K
β = 106.273 (2)°Plate, yellow
γ = 113.143 (3)°0.58 × 0.47 × 0.22 mm
V = 619.43 (19) Å3
Data collection top
Bruker SMART CCD area-detector
diffractometer
2155 independent reflections
Radiation source: fine-focus sealed tube1494 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.019
φ and ω scansθmax = 25.0°, θmin = 1.9°
Absorption correction: multi-scan
(SADABS: Sheldrick, 1996)
h = 99
Tmin = 0.947, Tmax = 0.979k = 96
3228 measured reflectionsl = 1213
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.125H atoms treated by a mixture of independent and constrained refinement
S = 1.03 w = 1/[σ2(Fo2) + (0.058P)2 + 0.141P]
where P = (Fo2 + 2Fc2)/3
2155 reflections(Δ/σ)max = 0.001
171 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = 0.19 e Å3
Crystal data top
C13H14N2O2·H2Oγ = 113.143 (3)°
Mr = 248.28V = 619.43 (19) Å3
Triclinic, P1Z = 2
a = 7.8992 (14) ÅMo Kα radiation
b = 8.0162 (15) ŵ = 0.10 mm1
c = 11.4759 (19) ÅT = 298 K
α = 96.835 (2)°0.58 × 0.47 × 0.22 mm
β = 106.273 (2)°
Data collection top
Bruker SMART CCD area-detector
diffractometer
2155 independent reflections
Absorption correction: multi-scan
(SADABS: Sheldrick, 1996)
1494 reflections with I > 2σ(I)
Tmin = 0.947, Tmax = 0.979Rint = 0.019
3228 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0430 restraints
wR(F2) = 0.125H atoms treated by a mixture of independent and constrained refinement
S = 1.03Δρmax = 0.15 e Å3
2155 reflectionsΔρmin = 0.19 e Å3
171 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.2932 (2)0.4626 (2)0.13373 (15)0.0410 (4)
N20.2456 (4)1.0252 (4)0.4479 (2)0.0598 (6)
O10.3004 (2)0.02104 (19)0.07892 (12)0.0487 (4)
O20.6375 (2)0.2808 (2)0.11625 (14)0.0555 (4)
H20.62200.18840.06710.083*
O30.0972 (2)0.8939 (2)0.65506 (14)0.0663 (5)
H140.15910.92520.73390.100*
H150.00160.91690.64370.100*
C10.4659 (3)0.4445 (3)0.15894 (17)0.0376 (5)
C20.4666 (3)0.2958 (3)0.08741 (17)0.0392 (5)
C30.2953 (3)0.1587 (3)0.01476 (17)0.0386 (5)
C40.1269 (3)0.1900 (3)0.03696 (19)0.0465 (5)
H40.01200.10850.10400.056*
C50.1280 (3)0.3360 (3)0.0369 (2)0.0476 (5)
H50.01280.34980.02090.057*
C60.2799 (3)0.6082 (3)0.21302 (18)0.0390 (5)
C70.1834 (3)0.5618 (3)0.2967 (2)0.0485 (5)
H70.12500.43770.30040.058*
C80.1741 (3)0.6998 (3)0.3745 (2)0.0502 (5)
H80.10930.66790.43070.060*
C90.2597 (3)0.8856 (3)0.37046 (18)0.0444 (5)
C100.3514 (3)0.9284 (3)0.28396 (19)0.0465 (5)
H100.40681.05180.27840.056*
C110.3620 (3)0.7914 (3)0.20597 (18)0.0430 (5)
H110.42460.82260.14860.052*
C120.6474 (3)0.5818 (3)0.26744 (18)0.0449 (5)
H12A0.64340.70170.28290.054*
H12B0.76290.60100.24610.054*
C130.6645 (4)0.5139 (4)0.3857 (2)0.0671 (7)
H13A0.78240.60470.45280.101*
H13B0.67020.39610.37110.101*
H13C0.55190.49780.40830.101*
H2A0.346 (5)1.136 (5)0.464 (3)0.091 (11)*
H2B0.214 (4)0.983 (4)0.513 (2)0.071 (8)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0404 (10)0.0359 (9)0.0441 (9)0.0184 (8)0.0109 (8)0.0073 (7)
N20.0670 (15)0.0683 (15)0.0520 (12)0.0413 (13)0.0205 (11)0.0054 (11)
O10.0524 (9)0.0468 (9)0.0433 (8)0.0258 (7)0.0108 (7)0.0023 (7)
O20.0439 (9)0.0527 (9)0.0588 (9)0.0254 (7)0.0058 (7)0.0070 (7)
O30.0696 (11)0.0737 (11)0.0486 (9)0.0372 (9)0.0089 (8)0.0027 (8)
C10.0385 (11)0.0363 (11)0.0388 (10)0.0174 (9)0.0128 (8)0.0121 (8)
C20.0397 (11)0.0417 (11)0.0391 (10)0.0208 (9)0.0130 (9)0.0138 (9)
C30.0457 (11)0.0361 (11)0.0327 (10)0.0177 (9)0.0126 (9)0.0095 (8)
C40.0424 (12)0.0417 (12)0.0438 (11)0.0173 (9)0.0031 (9)0.0060 (9)
C50.0397 (11)0.0442 (12)0.0537 (12)0.0218 (10)0.0067 (10)0.0081 (10)
C60.0404 (11)0.0385 (11)0.0413 (10)0.0210 (9)0.0144 (9)0.0100 (9)
C70.0477 (12)0.0453 (12)0.0602 (13)0.0230 (10)0.0234 (11)0.0223 (11)
C80.0527 (13)0.0649 (15)0.0512 (12)0.0349 (12)0.0281 (10)0.0239 (11)
C90.0427 (11)0.0537 (13)0.0405 (11)0.0309 (10)0.0080 (9)0.0086 (9)
C100.0498 (12)0.0389 (11)0.0525 (12)0.0213 (10)0.0185 (10)0.0119 (10)
C110.0472 (12)0.0416 (12)0.0436 (11)0.0201 (10)0.0199 (9)0.0139 (9)
C120.0424 (11)0.0401 (11)0.0478 (12)0.0197 (9)0.0109 (9)0.0049 (9)
C130.0633 (15)0.0707 (17)0.0441 (13)0.0200 (13)0.0051 (11)0.0052 (12)
Geometric parameters (Å, º) top
N1—C51.358 (2)C5—H50.93
N1—C11.382 (2)C6—C111.376 (3)
N1—C61.449 (2)C6—C71.384 (3)
N2—C91.404 (3)C7—C81.375 (3)
N2—H2A0.88 (3)C7—H70.93
N2—H2B0.92 (3)C8—C91.386 (3)
O1—C31.273 (2)C8—H80.93
O2—C21.354 (2)C9—C101.384 (3)
O2—H20.82C10—C111.376 (3)
O3—H140.85C10—H100.93
O3—H150.85C11—H110.93
C1—C21.367 (3)C12—C131.512 (3)
C1—C121.500 (3)C12—H12A0.97
C2—C31.431 (3)C12—H12B0.97
C3—C41.409 (3)C13—H13A0.96
C4—C51.356 (3)C13—H13B0.96
C4—H40.93C13—H13C0.96
C5—N1—C1120.00 (17)C8—C7—H7120.1
C5—N1—C6118.45 (16)C6—C7—H7120.1
C1—N1—C6121.45 (16)C7—C8—C9121.07 (19)
C9—N2—H2A111.3 (19)C7—C8—H8119.5
C9—N2—H2B109.7 (16)C9—C8—H8119.5
H2A—N2—H2B119 (3)C10—C9—C8118.19 (19)
C2—O2—H2109.5C10—C9—N2120.9 (2)
H14—O3—H15107.1C8—C9—N2120.8 (2)
C2—C1—N1119.21 (17)C11—C10—C9121.2 (2)
C2—C1—C12120.64 (17)C11—C10—H10119.4
N1—C1—C12120.09 (17)C9—C10—H10119.4
O2—C2—C1117.57 (17)C6—C11—C10119.89 (18)
O2—C2—C3119.97 (17)C6—C11—H11120.1
C1—C2—C3122.46 (18)C10—C11—H11120.1
O1—C3—C4124.17 (18)C1—C12—C13111.82 (17)
O1—C3—C2120.92 (18)C1—C12—H12A109.3
C4—C3—C2114.92 (17)C13—C12—H12A109.3
C5—C4—C3121.69 (19)C1—C12—H12B109.3
C5—C4—H4119.2C13—C12—H12B109.3
C3—C4—H4119.2H12A—C12—H12B107.9
C4—C5—N1121.67 (19)C12—C13—H13A109.5
C4—C5—H5119.2C12—C13—H13B109.5
N1—C5—H5119.2H13A—C13—H13B109.5
C11—C6—C7119.82 (19)C12—C13—H13C109.5
C11—C6—N1120.78 (17)H13A—C13—H13C109.5
C7—C6—N1119.41 (18)H13B—C13—H13C109.5
C8—C7—C6119.8 (2)
C5—N1—C1—C21.6 (3)C5—N1—C6—C11107.4 (2)
C6—N1—C1—C2174.75 (17)C1—N1—C6—C1176.2 (2)
C5—N1—C1—C12178.74 (17)C5—N1—C6—C772.6 (2)
C6—N1—C1—C122.4 (3)C1—N1—C6—C7103.8 (2)
N1—C1—C2—O2178.87 (16)C11—C6—C7—C81.5 (3)
C12—C1—C2—O21.7 (3)N1—C6—C7—C8178.45 (18)
N1—C1—C2—C31.1 (3)C6—C7—C8—C90.1 (3)
C12—C1—C2—C3178.27 (17)C7—C8—C9—C101.4 (3)
O2—C2—C3—O10.6 (3)C7—C8—C9—N2178.5 (2)
C1—C2—C3—O1179.44 (18)C8—C9—C10—C111.6 (3)
O2—C2—C3—C4179.23 (17)N2—C9—C10—C11178.6 (2)
C1—C2—C3—C40.8 (3)C7—C6—C11—C101.3 (3)
O1—C3—C4—C5177.90 (19)N1—C6—C11—C10178.65 (18)
C2—C3—C4—C52.3 (3)C9—C10—C11—C60.2 (3)
C3—C4—C5—N12.0 (3)C2—C1—C12—C1384.4 (2)
C1—N1—C5—C40.1 (3)N1—C1—C12—C1392.7 (2)
C6—N1—C5—C4176.39 (18)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O3—H15···N2i0.852.172.987 (3)160
O3—H14···O1ii0.852.012.857 (2)174
O2—H2···O10.822.342.7630 (19)113
O2—H2···O1iii0.822.012.662 (2)136
N2—H2B···O30.92 (3)2.15 (3)3.053 (3)170 (2)
C11—H11···O1iv0.932.453.324 (3)157
Symmetry codes: (i) x, y+2, z+1; (ii) x, y+1, z+1; (iii) x+1, y, z; (iv) x+1, y+1, z.

Experimental details

Crystal data
Chemical formulaC13H14N2O2·H2O
Mr248.28
Crystal system, space groupTriclinic, P1
Temperature (K)298
a, b, c (Å)7.8992 (14), 8.0162 (15), 11.4759 (19)
α, β, γ (°)96.835 (2), 106.273 (2), 113.143 (3)
V3)619.43 (19)
Z2
Radiation typeMo Kα
µ (mm1)0.10
Crystal size (mm)0.58 × 0.47 × 0.22
Data collection
DiffractometerBruker SMART CCD area-detector
Absorption correctionMulti-scan
(SADABS: Sheldrick, 1996)
Tmin, Tmax0.947, 0.979
No. of measured, independent and
observed [I > 2σ(I)] reflections
3228, 2155, 1494
Rint0.019
(sin θ/λ)max1)0.595
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.043, 0.125, 1.03
No. of reflections2155
No. of parameters171
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.15, 0.19

Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1999), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1999), SHELXTL.

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O3—H15···N2i0.852.172.987 (3)160
O3—H14···O1ii0.852.012.857 (2)174
O2—H2···O10.822.342.7630 (19)113
O2—H2···O1iii0.822.012.662 (2)136
N2—H2B···O30.92 (3)2.15 (3)3.053 (3)170 (2)
C11—H11···O1iv0.932.453.324 (3)157
Symmetry codes: (i) x, y+2, z+1; (ii) x, y+1, z+1; (iii) x+1, y, z; (iv) x+1, y+1, z.
 

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