In the title compound, C6H12NO4+·Cl-, the cations and anions are joined together via strong hydrogen bonds, forming infinite chains running along the [100] direction. The cation has crystallographic mirror symmetry, and the anion also lies on a mirror plane.
Supporting information
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.004 Å
- R factor = 0.043
- wR factor = 0.163
- Data-to-parameter ratio = 14.8
checkCIF results
No syntax errors found
ADDSYM reports no extra symmetry
Data collection: CAD-4 Software (Enraf-Nonius, 1989); cell refinement: CAD-4 Software; data reduction: HELENA (Spek, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97.
Dimethyl iminiodiacetate chloride
top
Crystal data top
C6H12NO4+·Cl− | Dx = 1.410 Mg m−3 |
Mr = 197.62 | Cu Kα radiation, λ = 1.54180 Å |
Orthorhombic, Pnma | Cell parameters from 25 reflections |
a = 7.0228 (4) Å | θ = 21.1–32.1° |
b = 17.298 (9) Å | µ = 3.51 mm−1 |
c = 7.6646 (5) Å | T = 293 K |
V = 931.1 (5) Å3 | Needle, colourless |
Z = 4 | 0.49 × 0.08 × 0.05 mm |
F(000) = 416 | |
Data collection top
Enraf-Nonius CAD-4 diffractometer | 787 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.019 |
Graphite monochromator | θmax = 72.4°, θmin = 5.1° |
ω–2θ scans | h = 0→8 |
Absorption correction: ψ scan (North et al., 1968) | k = −21→21 |
Tmin = 0.706, Tmax = 0.839 | l = −9→0 |
1837 measured reflections | 3 standard reflections every 180 min |
950 independent reflections | intensity decay: 4% |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.043 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.163 | w = 1/[σ2(Fo2) + (0.0755P)2 + 0.752P] where P = (Fo2 + 2Fc2)/3 |
S = 1.19 | (Δ/σ)max < 0.001 |
950 reflections | Δρmax = 0.32 e Å−3 |
64 parameters | Δρmin = −0.72 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0030 (8) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl | 0.18857 (14) | −0.2500 | −0.01795 (13) | 0.0511 (4) | |
O1 | 0.2949 (3) | 0.04572 (12) | −0.0195 (2) | 0.0507 (6) | |
O2 | 0.1140 (3) | 0.10952 (11) | −0.2134 (3) | 0.0554 (6) | |
N | 0.2310 (5) | 0.2500 | −0.0938 (4) | 0.0387 (7) | |
H1 | 0.252 (7) | 0.2500 | −0.205 (6) | 0.046* | |
H2 | 0.114 (7) | 0.2500 | −0.080 (6) | 0.046* | |
C1 | 0.3097 (4) | 0.17948 (17) | −0.0126 (3) | 0.0429 (7) | |
H1A | 0.2810 | 0.1794 | 0.1112 | 0.052* | |
H1B | 0.4471 | 0.1790 | −0.0260 | 0.052* | |
C2 | 0.2266 (4) | 0.10876 (15) | −0.0960 (3) | 0.0408 (7) | |
C3 | 0.2389 (5) | −0.02865 (19) | −0.0905 (4) | 0.0579 (9) | |
H3A | 0.1104 | −0.0257 | −0.1325 | 0.087* | |
H3B | 0.2470 | −0.0673 | −0.0009 | 0.087* | |
H3C | 0.3223 | −0.0422 | −0.1849 | 0.087* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl | 0.0411 (6) | 0.0630 (7) | 0.0491 (6) | 0.000 | 0.0021 (4) | 0.000 |
O1 | 0.0624 (13) | 0.0449 (11) | 0.0449 (11) | −0.0006 (10) | −0.0076 (9) | 0.0061 (8) |
O2 | 0.0623 (14) | 0.0541 (12) | 0.0498 (12) | 0.0009 (10) | −0.0165 (10) | 0.0003 (9) |
N | 0.0359 (16) | 0.0443 (17) | 0.0359 (16) | 0.000 | 0.0027 (13) | 0.000 |
C1 | 0.0430 (15) | 0.0456 (16) | 0.0402 (14) | 0.0037 (12) | −0.0023 (11) | 0.0026 (11) |
C2 | 0.0426 (14) | 0.0453 (15) | 0.0346 (13) | 0.0000 (12) | 0.0046 (11) | 0.0027 (10) |
C3 | 0.071 (2) | 0.0479 (17) | 0.0550 (19) | −0.0018 (16) | −0.0024 (16) | 0.0006 (13) |
Geometric parameters (Å, º) top
O1—C2 | 1.328 (3) | C1—C2 | 1.499 (4) |
O1—C3 | 1.451 (4) | C1—H1A | 0.970 |
O2—C2 | 1.198 (3) | C1—H1B | 0.970 |
N—C1 | 1.477 (3) | C3—H3A | 0.960 |
N—H1 | 0.87 (5) | C3—H3B | 0.960 |
N—H2 | 0.83 (5) | C3—H3C | 0.960 |
| | | |
C2—O1—C3 | 117.7 (2) | H1A—C1—H1B | 108.1 |
C1—N—C1i | 111.4 (3) | O2—C2—O1 | 125.4 (3) |
C1—N—H1 | 110.5 (15) | O2—C2—C1 | 124.6 (2) |
C1—N—H2 | 108.5 (16) | O1—C2—C1 | 110.0 (2) |
H1—N—H2 | 107 (5) | O1—C3—H3A | 109.5 |
N—C1—C2 | 110.4 (2) | O1—C3—H3B | 109.5 |
N—C1—H1A | 109.6 | H3A—C3—H3B | 109.5 |
C2—C1—H1A | 109.6 | O1—C3—H3C | 109.5 |
N—C1—H1B | 109.6 | H3A—C3—H3C | 109.5 |
C2—C1—H1B | 109.6 | H3B—C3—H3C | 109.5 |
| | | |
C1i—N—C1—C2 | 179.51 (18) | N—C1—C2—O2 | 0.9 (4) |
C3—O1—C2—O2 | 4.3 (4) | N—C1—C2—O1 | −178.6 (2) |
C3—O1—C2—C1 | −176.3 (2) | | |
Symmetry code: (i) x, −y+1/2, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N—H1···Clii | 0.87 (5) | 2.43 (5) | 3.299 (3) | 180 (4) |
N—H2···Cliii | 0.83 (5) | 2.25 (5) | 3.069 (3) | 168 (5) |
Symmetry codes: (ii) −x+1/2, −y, z−1/2; (iii) −x, −y, −z. |