Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536802001800/cf6146sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536802001800/cf6146Isup2.hkl |
CCDC reference: 182594
Hydrogen atom positions were obtained from difference syntheses. Methyl groups were refined as idealized rigid groups allowed to rotate about the C—N bonds. H atoms of the NH2 group were refined freely.
Data collection: DIF4 (Stoe & Cie, 1992); cell refinement: DIF4; data reduction: REDU4 (Stoe & Cie, 1992); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP (Siemens, 1994); software used to prepare material for publication: SHELXL97.
Fig. 1. Dimeric unit of the title compound. Hydrogen bonds (Table 2) are indicated as thick dashed lines. Ellipsoids are at the 50% probability level. |
C5H14N3+·Cl− | F(000) = 328 |
Mr = 151.64 | Dx = 1.222 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 6.979 (4) Å | Cell parameters from 50 reflections |
b = 13.153 (7) Å | θ = 10–11.5° |
c = 9.283 (4) Å | µ = 0.39 mm−1 |
β = 104.73 (4)° | T = 143 K |
V = 824.1 (7) Å3 | Block, colourless |
Z = 4 | 0.7 × 0.6 × 0.6 mm |
Stoe STADI-4 diffractometer | Rint = 0.026 |
Radiation source: fine-focus sealed tube | θmax = 27.6°, θmin = 3.1° |
Graphite monochromator | h = −9→9 |
ω/θ scans | k = −17→0 |
3151 measured reflections | l = −12→6 |
1900 independent reflections | 3 standard reflections every 60 min |
1763 reflections with I > 2σ(I) | intensity decay: none |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.025 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.065 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0265P)2 + 0.1898P] where P = (Fo2 + 2Fc2)/3 |
1900 reflections | (Δ/σ)max = 0.001 |
94 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
C5H14N3+·Cl− | V = 824.1 (7) Å3 |
Mr = 151.64 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 6.979 (4) Å | µ = 0.39 mm−1 |
b = 13.153 (7) Å | T = 143 K |
c = 9.283 (4) Å | 0.7 × 0.6 × 0.6 mm |
β = 104.73 (4)° |
Stoe STADI-4 diffractometer | Rint = 0.026 |
3151 measured reflections | 3 standard reflections every 60 min |
1900 independent reflections | intensity decay: none |
1763 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.025 | 0 restraints |
wR(F2) = 0.065 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.16 e Å−3 |
1900 reflections | Δρmin = −0.19 e Å−3 |
94 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. Least-squares planes (x,y,z in crystal coordinates) and deviations from them (* indicates atom used to define plane) 2.6752 (0.0044) x + 9.9297 (0.0086) y + 3.8724 (0.0057) z = 7.0366 (0.0055) * -0.0098 (0.0009) C1 * 0.0033 (0.0003) N1 * 0.0032 (0.0003) N2 * 0.0033 (0.0003) N3 0.4890 (0.0020) C2 - 0.7075 (0.0019) C3 - 0.4678 (0.0020) C4 0.5822 (0.0019) C5 Rms deviation of fitted atoms = 0.0056 |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl | 0.65600 (3) | 0.417296 (18) | 0.23930 (3) | 0.02438 (9) | |
N1 | 0.31065 (15) | 0.58587 (8) | 0.10105 (11) | 0.0305 (2) | |
H1A | 0.406 (2) | 0.5470 (12) | 0.1638 (18) | 0.044 (4)* | |
H1B | 0.315 (2) | 0.5940 (12) | 0.0094 (19) | 0.043 (4)* | |
N2 | 0.02054 (14) | 0.67813 (7) | 0.06487 (10) | 0.0283 (2) | |
N3 | 0.11677 (14) | 0.57239 (7) | 0.26955 (10) | 0.0264 (2) | |
C1 | 0.14947 (16) | 0.61096 (8) | 0.14469 (11) | 0.0239 (2) | |
C2 | 0.0792 (2) | 0.75015 (9) | −0.03487 (14) | 0.0388 (3) | |
H2A | 0.0067 | 0.8140 | −0.0354 | 0.047* | |
H2B | 0.0486 | 0.7219 | −0.1358 | 0.047* | |
H2C | 0.2219 | 0.7631 | −0.0006 | 0.047* | |
C3 | −0.19258 (17) | 0.66968 (9) | 0.05025 (14) | 0.0341 (3) | |
H3A | −0.2633 | 0.6705 | −0.0555 | 0.041* | |
H3B | −0.2367 | 0.7270 | 0.1011 | 0.041* | |
H3C | −0.2205 | 0.6058 | 0.0953 | 0.041* | |
C4 | 0.20325 (17) | 0.47658 (9) | 0.33385 (13) | 0.0323 (2) | |
H4A | 0.0980 | 0.4315 | 0.3485 | 0.039* | |
H4B | 0.2975 | 0.4897 | 0.4300 | 0.039* | |
H4C | 0.2723 | 0.4442 | 0.2663 | 0.039* | |
C5 | 0.00402 (17) | 0.62631 (9) | 0.35867 (12) | 0.0300 (2) | |
H5A | 0.0782 | 0.6256 | 0.4636 | 0.036* | |
H5B | −0.1241 | 0.5927 | 0.3481 | 0.036* | |
H5C | −0.0176 | 0.6968 | 0.3240 | 0.036* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl | 0.02306 (14) | 0.02722 (14) | 0.02306 (13) | 0.00115 (9) | 0.00625 (9) | 0.00238 (9) |
N1 | 0.0312 (5) | 0.0370 (5) | 0.0265 (5) | 0.0069 (4) | 0.0131 (4) | 0.0079 (4) |
N2 | 0.0315 (5) | 0.0251 (4) | 0.0286 (5) | 0.0034 (4) | 0.0083 (4) | 0.0022 (4) |
N3 | 0.0276 (5) | 0.0286 (5) | 0.0255 (4) | 0.0023 (3) | 0.0116 (4) | 0.0020 (3) |
C1 | 0.0263 (5) | 0.0227 (5) | 0.0231 (5) | −0.0019 (4) | 0.0068 (4) | −0.0013 (4) |
C2 | 0.0541 (8) | 0.0278 (6) | 0.0367 (6) | 0.0054 (5) | 0.0154 (5) | 0.0078 (5) |
C3 | 0.0293 (6) | 0.0324 (6) | 0.0364 (6) | 0.0054 (4) | 0.0005 (5) | −0.0034 (5) |
C4 | 0.0345 (6) | 0.0344 (6) | 0.0309 (5) | 0.0055 (5) | 0.0139 (5) | 0.0097 (5) |
C5 | 0.0316 (6) | 0.0330 (6) | 0.0287 (5) | −0.0033 (4) | 0.0136 (4) | −0.0065 (4) |
N1—C1 | 1.3304 (15) | C2—H2C | 0.980 |
N1—H1A | 0.918 (17) | C3—H3A | 0.980 |
N1—H1B | 0.866 (17) | C3—H3B | 0.980 |
N2—C1 | 1.3417 (15) | C3—H3C | 0.980 |
N2—C2 | 1.4543 (15) | C4—H4A | 0.980 |
N2—C3 | 1.4630 (17) | C4—H4B | 0.980 |
N3—C1 | 1.3370 (14) | C4—H4C | 0.980 |
N3—C4 | 1.4580 (15) | C5—H5A | 0.980 |
N3—C5 | 1.4621 (14) | C5—H5B | 0.980 |
C2—H2A | 0.980 | C5—H5C | 0.980 |
C2—H2B | 0.980 | ||
C1—N1—H1A | 118.3 (9) | N2—C3—H3A | 109.5 |
C1—N1—H1B | 120.8 (11) | N2—C3—H3B | 109.5 |
H1A—N1—H1B | 119.5 (14) | H3A—C3—H3B | 109.5 |
C1—N2—C2 | 121.51 (10) | N2—C3—H3C | 109.5 |
C1—N2—C3 | 121.63 (10) | H3A—C3—H3C | 109.5 |
C2—N2—C3 | 115.76 (10) | H3B—C3—H3C | 109.5 |
C1—N3—C4 | 122.60 (9) | N3—C4—H4A | 109.5 |
C1—N3—C5 | 122.79 (10) | N3—C4—H4B | 109.5 |
C4—N3—C5 | 114.45 (9) | H4A—C4—H4B | 109.5 |
N1—C1—N3 | 120.91 (10) | N3—C4—H4C | 109.5 |
N1—C1—N2 | 119.70 (10) | H4A—C4—H4C | 109.5 |
N3—C1—N2 | 119.36 (10) | H4B—C4—H4C | 109.5 |
N2—C2—H2A | 109.5 | N3—C5—H5A | 109.5 |
N2—C2—H2B | 109.5 | N3—C5—H5B | 109.5 |
H2A—C2—H2B | 109.5 | H5A—C5—H5B | 109.5 |
N2—C2—H2C | 109.5 | N3—C5—H5C | 109.5 |
H2A—C2—H2C | 109.5 | H5A—C5—H5C | 109.5 |
H2B—C2—H2C | 109.5 | H5B—C5—H5C | 109.5 |
C4—N3—C1—N1 | −23.93 (16) | C2—N2—C1—N1 | −21.74 (16) |
C5—N3—C1—N1 | 151.32 (11) | C3—N2—C1—N1 | 145.76 (11) |
C4—N3—C1—N2 | 158.01 (10) | C2—N2—C1—N3 | 156.35 (10) |
C5—N3—C1—N2 | −26.74 (16) | C3—N2—C1—N3 | −36.16 (15) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Cl | 0.918 (17) | 2.415 (17) | 3.2863 (17) | 158.4 (13) |
N1—H1B···Cli | 0.866 (17) | 2.373 (17) | 3.2268 (17) | 168.9 (14) |
C3—H3B···Clii | 0.98 | 2.89 | 3.773 (2) | 150 |
C4—H4A···Cliii | 0.98 | 3.00 | 3.776 (2) | 137 |
C4—H4C···Cl | 0.98 | 2.77 | 3.574 (2) | 139 |
C5—H5A···Cliv | 0.98 | 2.96 | 3.922 (2) | 167 |
C5—H5B···Cliii | 0.98 | 2.81 | 3.6492 (19) | 144 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1/2, y+1/2, −z+1/2; (iii) x−1, y, z; (iv) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C5H14N3+·Cl− |
Mr | 151.64 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 143 |
a, b, c (Å) | 6.979 (4), 13.153 (7), 9.283 (4) |
β (°) | 104.73 (4) |
V (Å3) | 824.1 (7) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.39 |
Crystal size (mm) | 0.7 × 0.6 × 0.6 |
Data collection | |
Diffractometer | Stoe STADI-4 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3151, 1900, 1763 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.652 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.025, 0.065, 1.08 |
No. of reflections | 1900 |
No. of parameters | 94 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.16, −0.19 |
Computer programs: DIF4 (Stoe & Cie, 1992), DIF4, REDU4 (Stoe & Cie, 1992), SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), XP (Siemens, 1994), SHELXL97.
N1—C1 | 1.3304 (15) | N3—C1 | 1.3370 (14) |
N2—C1 | 1.3417 (15) | ||
N1—C1—N3 | 120.91 (10) | N3—C1—N2 | 119.36 (10) |
N1—C1—N2 | 119.70 (10) | ||
C4—N3—C1—N1 | −23.93 (16) | C2—N2—C1—N1 | −21.74 (16) |
C5—N3—C1—N1 | 151.32 (11) | C3—N2—C1—N1 | 145.76 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Cl | 0.918 (17) | 2.415 (17) | 3.2863 (17) | 158.4 (13) |
N1—H1B···Cli | 0.866 (17) | 2.373 (17) | 3.2268 (17) | 168.9 (14) |
C3—H3B···Clii | 0.98 | 2.89 | 3.773 (2) | 150 |
C4—H4A···Cliii | 0.98 | 3.00 | 3.776 (2) | 137 |
C4—H4C···Cl | 0.98 | 2.77 | 3.574 (2) | 139 |
C5—H5A···Cliv | 0.98 | 2.96 | 3.922 (2) | 167 |
C5—H5B···Cliii | 0.98 | 2.81 | 3.6492 (19) | 144 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1/2, y+1/2, −z+1/2; (iii) x−1, y, z; (iv) −x+1, −y+1, −z+1. |
The title compound was formed as an unexpected hydrolysis product during a study of guanidinophosphine derivatives (Münchenberg, 1996). Its structure is nevertheless of interest because few salts of this cation have been structurally investigated (CCDC refcodes: BEQQOD, KOYWEA, MATKAT and XERHEH; Version Oct. 2002; Allen & Kennard, 1993), and because of its hydrogen-bonding pattern.
The formula unit displays no imposed crystallographic symmetry. The geometry at the central atom C1 is almost ideal trigonal planar; the r.m.s. deviation from the least-squares plane of C1, N1, N2 and N3 is 0.006 Å. The methyl groups are rotated out of this plane (torsion angles are in Table 1).
The classical hydrogen bonds of the form N+—H···Cl- (Table 2) link the formula units into discrete centrosymmetric dimers (Fig. 1). Further contacts of the form C—H···Cl-, the shortest of which (C4—H4C···Cl) has a normalized (Steiner, 1998) H···Cl distance of only 2.70 Å, may also be interpreted as hydrogen bonds.