The title compound, C8H12O3, is the parent acid of a tentative ligand whose binding capability toward a metal ion is modified compared with the smaller and more hydrophilic glycolic acid. In the crystal structure, chains of homodromic rings made up of O—H–π and C=O–π co-operative sequences are lined up along [100]. The homodromic rings are at the centres of tetramers of the title compound. They are 12-membered and contain two carboxy OH, two alcohol OH and two C=O functions. The rings are connected along the chain direction by the central C—C bond of the acid. The hydrophilic chains are embedded in a lipophilic matrix of hydrocarbon residues.
Supporting information
CCDC reference: 673096
Key indicators
- Single-crystal X-ray study
- T = 200 K
- Mean (C-C) = 0.002 Å
- R factor = 0.039
- wR factor = 0.104
- Data-to-parameter ratio = 15.5
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT154_ALERT_1_C The su's on the Cell Angles are Equal (x 10000) 300 Deg.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H8B .. O2 .. 2.61 Ang.
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
2 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
The title compound was prepared according to standard procedures (Zaug et
al., 1960) upon aqueous oxidation of 1,1-dicyclopropyl-prop-2-yne-1-ol.
Crystals suitable for X-ray analysis were obtained upon the free evaporation
of a solution of the compound in diethylether at room temperature.
The H atoms were refined as riding on their parent atoms (Uiso as the
1.2-fold of the parent atom's Ueq). The O-bonded H atoms were refined
using SHELXL's electron-density-related AFIX 147 statement.
Data collection: COLLECT (Nonius, 2004); cell refinement: SCALEPACK (Otwinowski & Minor 1997); data reduction: DENZO and SCALEPACK (Otwinowski & Minor 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).
2,2-Dicyclopropylglycolic acid
top
Crystal data top
C8H12O3 | Z = 2 |
Mr = 156.18 | F(000) = 168 |
Triclinic, P1 | Dx = 1.274 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.8595 (3) Å | Cell parameters from 3975 reflections |
b = 7.2955 (3) Å | θ = 3.1–26.0° |
c = 10.5515 (5) Å | µ = 0.10 mm−1 |
α = 92.107 (3)° | T = 200 K |
β = 100.758 (3)° | Block, colourless |
γ = 112.263 (3)° | 0.16 × 0.13 × 0.08 mm |
V = 407.22 (3) Å3 | |
Data collection top
Nonius KappaCCD diffractometer | 1221 reflections with I > 2σ(I) |
Radiation source: rotating anode | Rint = 0.026 |
MONTEL, graded multilayered X-ray optics monochromator | θmax = 26.0°, θmin = 3.4° |
CCD; rotation images; thick slices scans | h = −7→7 |
3030 measured reflections | k = −8→8 |
1594 independent reflections | l = −12→12 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.039 | H-atom parameters constrained |
wR(F2) = 0.104 | w = 1/[σ2(Fo2) + (0.0406P)2 + 0.1023P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
1594 reflections | Δρmax = 0.19 e Å−3 |
103 parameters | Δρmin = −0.18 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.096 (12) |
Crystal data top
C8H12O3 | γ = 112.263 (3)° |
Mr = 156.18 | V = 407.22 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 5.8595 (3) Å | Mo Kα radiation |
b = 7.2955 (3) Å | µ = 0.10 mm−1 |
c = 10.5515 (5) Å | T = 200 K |
α = 92.107 (3)° | 0.16 × 0.13 × 0.08 mm |
β = 100.758 (3)° | |
Data collection top
Nonius KappaCCD diffractometer | 1221 reflections with I > 2σ(I) |
3030 measured reflections | Rint = 0.026 |
1594 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.104 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.19 e Å−3 |
1594 reflections | Δρmin = −0.18 e Å−3 |
103 parameters | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O3 | 0.45110 (17) | 0.71307 (15) | 0.64164 (10) | 0.0310 (3) | |
H83 | 0.4429 | 0.6235 | 0.5865 | 0.037* | |
O1 | 0.78873 (19) | 0.61259 (16) | 0.55317 (11) | 0.0356 (3) | |
O2 | 1.11508 (19) | 0.85312 (17) | 0.68539 (12) | 0.0388 (4) | |
H82 | 1.1983 | 0.7962 | 0.6561 | 0.047* | |
C1 | 0.8731 (3) | 0.7539 (2) | 0.63559 (14) | 0.0237 (4) | |
C2 | 0.7095 (2) | 0.8385 (2) | 0.69426 (14) | 0.0231 (4) | |
C3 | 0.7557 (3) | 1.0442 (2) | 0.65394 (15) | 0.0304 (4) | |
H3 | 0.7210 | 1.0464 | 0.5577 | 0.037* | |
C4 | 0.9573 (3) | 1.2317 (2) | 0.7267 (2) | 0.0468 (5) | |
H4A | 1.0446 | 1.3374 | 0.6757 | 0.056* | |
H4B | 1.0650 | 1.2212 | 0.8081 | 0.056* | |
C5 | 0.6863 (3) | 1.1889 (2) | 0.72612 (19) | 0.0451 (5) | |
H5A | 0.6063 | 1.2680 | 0.6746 | 0.054* | |
H5B | 0.6267 | 1.1517 | 0.8070 | 0.054* | |
C6 | 0.7678 (3) | 0.8316 (2) | 0.83998 (15) | 0.0282 (4) | |
H6 | 0.9396 | 0.9278 | 0.8863 | 0.034* | |
C7 | 0.6769 (4) | 0.6371 (3) | 0.89413 (19) | 0.0483 (5) | |
H7A | 0.5677 | 0.5164 | 0.8328 | 0.058* | |
H7B | 0.7929 | 0.6153 | 0.9674 | 0.058* | |
C8 | 0.5697 (3) | 0.7866 (3) | 0.91947 (17) | 0.0397 (5) | |
H8A | 0.6198 | 0.8577 | 1.0083 | 0.048* | |
H8B | 0.3944 | 0.7589 | 0.8736 | 0.048* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O3 | 0.0178 (5) | 0.0361 (6) | 0.0352 (7) | 0.0091 (5) | 0.0027 (5) | −0.0136 (5) |
O1 | 0.0252 (6) | 0.0375 (7) | 0.0403 (7) | 0.0106 (5) | 0.0055 (5) | −0.0140 (5) |
O2 | 0.0188 (6) | 0.0469 (7) | 0.0477 (8) | 0.0137 (5) | 0.0024 (5) | −0.0166 (6) |
C1 | 0.0197 (7) | 0.0277 (8) | 0.0242 (8) | 0.0100 (6) | 0.0044 (6) | 0.0013 (6) |
C2 | 0.0167 (7) | 0.0257 (8) | 0.0250 (8) | 0.0077 (6) | 0.0026 (6) | −0.0029 (6) |
C3 | 0.0340 (9) | 0.0326 (9) | 0.0284 (9) | 0.0162 (7) | 0.0088 (7) | 0.0035 (7) |
C4 | 0.0463 (11) | 0.0298 (10) | 0.0559 (12) | 0.0049 (8) | 0.0130 (9) | 0.0055 (8) |
C5 | 0.0573 (12) | 0.0325 (10) | 0.0571 (12) | 0.0238 (9) | 0.0257 (10) | 0.0076 (8) |
C6 | 0.0265 (8) | 0.0331 (8) | 0.0247 (8) | 0.0121 (7) | 0.0043 (6) | 0.0005 (6) |
C7 | 0.0696 (13) | 0.0442 (11) | 0.0415 (11) | 0.0291 (10) | 0.0203 (10) | 0.0149 (8) |
C8 | 0.0403 (10) | 0.0526 (11) | 0.0305 (9) | 0.0199 (8) | 0.0142 (8) | 0.0051 (8) |
Geometric parameters (Å, º) top
O3—C2 | 1.4273 (16) | C4—H4A | 0.9900 |
O3—H83 | 0.8400 | C4—H4B | 0.9900 |
O1—C1 | 1.2046 (17) | C5—H5A | 0.9900 |
O2—C1 | 1.3139 (17) | C5—H5B | 0.9900 |
O2—H82 | 0.8400 | C6—C7 | 1.492 (2) |
C1—C2 | 1.525 (2) | C6—C8 | 1.501 (2) |
C2—C3 | 1.513 (2) | C6—H6 | 1.0000 |
C2—C6 | 1.518 (2) | C7—C8 | 1.489 (2) |
C3—C4 | 1.489 (2) | C7—H7A | 0.9900 |
C3—C5 | 1.497 (2) | C7—H7B | 0.9900 |
C3—H3 | 1.0000 | C8—H8A | 0.9900 |
C4—C5 | 1.497 (3) | C8—H8B | 0.9900 |
| | | |
C2—O3—H83 | 109.5 | C4—C5—H5A | 117.8 |
C1—O2—H82 | 109.5 | C3—C5—H5A | 117.8 |
O1—C1—O2 | 124.35 (13) | C4—C5—H5B | 117.8 |
O1—C1—C2 | 123.54 (13) | C3—C5—H5B | 117.8 |
O2—C1—C2 | 112.11 (12) | H5A—C5—H5B | 114.9 |
O3—C2—C3 | 108.01 (12) | C7—C6—C8 | 59.66 (11) |
O3—C2—C6 | 109.26 (12) | C7—C6—C2 | 120.19 (14) |
C3—C2—C6 | 114.76 (12) | C8—C6—C2 | 122.65 (13) |
O3—C2—C1 | 108.04 (11) | C7—C6—H6 | 114.5 |
C3—C2—C1 | 109.06 (12) | C8—C6—H6 | 114.5 |
C6—C2—C1 | 107.53 (12) | C2—C6—H6 | 114.5 |
C4—C3—C5 | 60.16 (12) | C8—C7—C6 | 60.49 (11) |
C4—C3—C2 | 124.26 (14) | C8—C7—H7A | 117.7 |
C5—C3—C2 | 121.31 (13) | C6—C7—H7A | 117.7 |
C4—C3—H3 | 113.6 | C8—C7—H7B | 117.7 |
C5—C3—H3 | 113.6 | C6—C7—H7B | 117.7 |
C2—C3—H3 | 113.6 | H7A—C7—H7B | 114.8 |
C3—C4—C5 | 60.20 (11) | C7—C8—C6 | 59.85 (11) |
C3—C4—H4A | 117.8 | C7—C8—H8A | 117.8 |
C5—C4—H4A | 117.8 | C6—C8—H8A | 117.8 |
C3—C4—H4B | 117.8 | C7—C8—H8B | 117.8 |
C5—C4—H4B | 117.8 | C6—C8—H8B | 117.8 |
H4A—C4—H4B | 114.9 | H8A—C8—H8B | 114.9 |
C4—C5—C3 | 59.63 (11) | | |
| | | |
O1—C1—C2—O3 | 4.3 (2) | C1—C2—C3—C5 | −161.26 (15) |
O2—C1—C2—O3 | −175.78 (12) | C2—C3—C4—C5 | −109.52 (17) |
O1—C1—C2—C3 | −112.91 (16) | C2—C3—C5—C4 | 114.25 (17) |
O2—C1—C2—C3 | 67.05 (16) | O3—C2—C6—C7 | 44.52 (18) |
O1—C1—C2—C6 | 122.07 (16) | C3—C2—C6—C7 | 165.97 (14) |
O2—C1—C2—C6 | −57.96 (16) | C1—C2—C6—C7 | −72.51 (17) |
O3—C2—C3—C4 | 154.67 (14) | O3—C2—C6—C8 | −26.75 (19) |
C6—C2—C3—C4 | 32.5 (2) | C3—C2—C6—C8 | 94.70 (17) |
C1—C2—C3—C4 | −88.14 (18) | C1—C2—C6—C8 | −143.77 (15) |
O3—C2—C3—C5 | 81.55 (17) | C2—C6—C7—C8 | −112.50 (16) |
C6—C2—C3—C5 | −40.6 (2) | C2—C6—C8—C7 | 108.48 (17) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H82···O3i | 0.84 | 1.83 | 2.6387 (16) | 161 |
O3—H83···O1 | 0.84 | 2.15 | 2.6572 (16) | 119 |
O3—H83···O1ii | 0.84 | 2.07 | 2.8067 (15) | 146 |
C8—H8B···O2iii | 0.99 | 2.61 | 3.470 (2) | 145 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, −y+1, −z+1; (iii) x−1, y, z. |
Experimental details
Crystal data |
Chemical formula | C8H12O3 |
Mr | 156.18 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 200 |
a, b, c (Å) | 5.8595 (3), 7.2955 (3), 10.5515 (5) |
α, β, γ (°) | 92.107 (3), 100.758 (3), 112.263 (3) |
V (Å3) | 407.22 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.16 × 0.13 × 0.08 |
|
Data collection |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3030, 1594, 1221 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.617 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.104, 1.04 |
No. of reflections | 1594 |
No. of parameters | 103 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.19, −0.18 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H82···O3i | 0.84 | 1.83 | 2.6387 (16) | 161 |
O3—H83···O1 | 0.84 | 2.15 | 2.6572 (16) | 119 |
O3—H83···O1ii | 0.84 | 2.07 | 2.8067 (15) | 146 |
C8—H8B···O2iii | 0.99 | 2.61 | 3.470 (2) | 145 |
Symmetry codes: (i) x+1, y, z; (ii) −x+1, −y+1, −z+1; (iii) x−1, y, z. |
2,2-Di(cyclopropyl) glycolic acid (I) was prepared as the parent acid of a potentially chelating ligand bearing two conformationally rigid cyclopropane moieties. The cyclopropane rings are oriented askew to each other (Fig. 1). Bond lengths and angles are normal (Yus et al., 2005, Febles et al., 2004).
Fig. 2 shows hydrophilic chains along the viewing direction embedded in a lipophilic matrix. All the contacts between the atoms of the lipophilic matrix arise at distances larger than the sum of the van-der-Waals radii.
Fig. 3 shows an individual hydrogen-bonded chain. Instead of the frequently found carboxylic-acid dimers, pairs of alcoholic OH and C=O functions are the anchoring points for a dimer. If the C1–C2 σ bond is regarded as being incapable of relaying cooperativity, and if the weakly bifurcated part of the bond from the O3–H donor is neglected, there is—contrary to a pure carboxylic acid dimer—no cooperativity in the dimer. Instead, an extended cooperative motif is formed by the mutual lateral contact of two dimers each: 12-membered, homodromic rings that contain O–H vectors as well as π-cooperativity.
Weak interactions below the sum-of-van-der-Waals-radii limit are sparse. The only contact of this kind is a non-classic C–H···O hydrogen bond that supports the hydrophilic chain along the O2···O3 contact.