In the molecules of 5-amino-1-phenyltetrazole, C
7H
7N
5, (I), and 5-amino-1-(1-naphthyl)tetrazole, C
11H
9N
5, (II), the tetrazole rings and aryl fragments are not coplanar; corresponding dihedral angles are 50.58 (5) and 45.19 (7)° for the two independent molecules of (I), and 64.14 (5)° for (II). Intermolecular N—H
N hydrogen bonds between the amino groups and tetrazole N atoms are primarily responsible for formation of two-dimensional networks extending parallel to the
bc plane in both compounds. The presence of the amino group has a distinct effect on the geometry of the tetrazole rings in each case.
Supporting information
CCDC references: 229105; 229106
The title compounds, (I) and (II), were prepared from aniline and 1-naphthylamine, respectively, using the three-stage technique reported by Vorobiev et al. (2003). Single crystals of (I) and (II) suitable for analysis were grown by slow evaporation from a 2-propanol–acetonitrile solvent system (3:1) at room temperature.
H-atom positions were found from difference Fourier map and thereafter positional and Uiso parameters were refined freely.
Data collection: R3m Software (Nicolet, 1980) for (I); R3m Sofrware (Nicolet, 1980) for (II). Cell refinement: R3m Software for (I); R3m Sofrware for (II). Data reduction: R3m Software for (I); R3m Sofrware for (II). For both compounds, program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97.
(I) 5-amino-1-phenyltetrazole
top
Crystal data top
C7H7N5 | F(000) = 672 |
Mr = 161.18 | Dx = 1.386 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 11.619 (3) Å | θ = 18.8–21.3° |
b = 7.342 (2) Å | µ = 0.10 mm−1 |
c = 18.124 (3) Å | T = 293 K |
β = 92.202 (19)° | Rectangular prism, colourless |
V = 1545.0 (6) Å3 | 0.60 × 0.40 × 0.24 mm |
Z = 8 | |
Data collection top
Nicolet R3m four-circle diffractometer | Rint = 0.030 |
Radiation source: fine-focus sealed tube | θmax = 30.1°, θmin = 1.8° |
Graphite monochromator | h = 0→16 |
ω/2θ scans | k = 0→10 |
4745 measured reflections | l = −25→25 |
4542 independent reflections | 3 standard reflections every 100 reflections |
3154 reflections with I > 2σ(I) | intensity decay: none |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | All H-atom parameters refined |
wR(F2) = 0.145 | w = 1/[σ2(Fo2) + (0.076P)2 + 0.1138P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
4542 reflections | Δρmax = 0.19 e Å−3 |
274 parameters | Δρmin = −0.24 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.211 (9) |
Crystal data top
C7H7N5 | V = 1545.0 (6) Å3 |
Mr = 161.18 | Z = 8 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.619 (3) Å | µ = 0.10 mm−1 |
b = 7.342 (2) Å | T = 293 K |
c = 18.124 (3) Å | 0.60 × 0.40 × 0.24 mm |
β = 92.202 (19)° | |
Data collection top
Nicolet R3m four-circle diffractometer | Rint = 0.030 |
4745 measured reflections | 3 standard reflections every 100 reflections |
4542 independent reflections | intensity decay: none |
3154 reflections with I > 2σ(I) | |
Refinement top
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.145 | All H-atom parameters refined |
S = 1.05 | Δρmax = 0.19 e Å−3 |
4542 reflections | Δρmin = −0.24 e Å−3 |
274 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1A | 0.25115 (8) | 0.15732 (14) | 0.41508 (5) | 0.0485 (2) | |
N2A | 0.18779 (10) | 0.19257 (17) | 0.47555 (6) | 0.0642 (3) | |
N3A | 0.25662 (12) | 0.17375 (18) | 0.53183 (6) | 0.0689 (3) | |
N4A | 0.36476 (10) | 0.12655 (16) | 0.51202 (5) | 0.0603 (3) | |
C5A | 0.35933 (10) | 0.11594 (16) | 0.43878 (6) | 0.0477 (3) | |
N5A | 0.44705 (9) | 0.07523 (18) | 0.39605 (5) | 0.0578 (3) | |
H5A | 0.5063 (14) | 0.019 (2) | 0.4188 (9) | 0.076 (5)* | |
H5B | 0.4318 (12) | 0.036 (2) | 0.3492 (8) | 0.065 (4)* | |
C6A | 0.20163 (9) | 0.16779 (15) | 0.34169 (6) | 0.0453 (2) | |
C7A | 0.25593 (10) | 0.26893 (18) | 0.28936 (6) | 0.0515 (3) | |
H7A | 0.3266 (13) | 0.334 (2) | 0.3036 (8) | 0.066 (4)* | |
C8A | 0.20924 (12) | 0.2742 (2) | 0.21782 (7) | 0.0576 (3) | |
H8A | 0.2479 (14) | 0.343 (2) | 0.1809 (10) | 0.083 (5)* | |
C9A | 0.11044 (13) | 0.1806 (2) | 0.19978 (8) | 0.0663 (4) | |
H9A | 0.0813 (16) | 0.188 (3) | 0.1485 (11) | 0.093 (5)* | |
C10A | 0.05484 (15) | 0.0848 (2) | 0.25294 (10) | 0.0800 (5) | |
H10A | −0.018 (2) | 0.019 (4) | 0.2410 (12) | 0.127 (7)* | |
C11A | 0.10020 (12) | 0.0772 (2) | 0.32489 (8) | 0.0660 (4) | |
H11A | 0.0602 (15) | 0.015 (3) | 0.3657 (9) | 0.085 (5)* | |
N1B | 0.31763 (9) | 0.83550 (14) | 0.14261 (5) | 0.0517 (3) | |
N2B | 0.28885 (15) | 0.70393 (18) | 0.19183 (7) | 0.0808 (4) | |
N3B | 0.34968 (16) | 0.7369 (2) | 0.25096 (7) | 0.0888 (5) | |
N4B | 0.41771 (12) | 0.8859 (2) | 0.24375 (6) | 0.0713 (4) | |
C5B | 0.39637 (10) | 0.94503 (19) | 0.17552 (6) | 0.0532 (3) | |
N5B | 0.44640 (11) | 1.0871 (2) | 0.14375 (7) | 0.0724 (4) | |
H5C | 0.4107 (17) | 1.137 (3) | 0.1077 (11) | 0.097 (6)* | |
H5D | 0.4849 (18) | 1.158 (3) | 0.1751 (12) | 0.106 (7)* | |
C6B | 0.26717 (10) | 0.83768 (15) | 0.06961 (6) | 0.0457 (3) | |
C7B | 0.33647 (10) | 0.86182 (18) | 0.01017 (6) | 0.0509 (3) | |
H7B | 0.4171 (13) | 0.874 (2) | 0.0171 (8) | 0.067 (4)* | |
C8B | 0.28668 (13) | 0.8637 (2) | −0.06055 (7) | 0.0591 (3) | |
H8B | 0.3376 (14) | 0.881 (2) | −0.1026 (9) | 0.077 (5)* | |
C9B | 0.17024 (13) | 0.8386 (2) | −0.07105 (8) | 0.0675 (4) | |
H9B | 0.1308 (15) | 0.839 (2) | −0.1203 (10) | 0.084 (5)* | |
C10B | 0.10231 (13) | 0.8107 (2) | −0.01182 (9) | 0.0737 (4) | |
H10B | 0.0208 (16) | 0.789 (3) | −0.0180 (9) | 0.091 (5)* | |
C11B | 0.15003 (12) | 0.8113 (2) | 0.05934 (8) | 0.0612 (3) | |
H11B | 0.1088 (13) | 0.789 (2) | 0.1002 (8) | 0.066 (4)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1A | 0.0537 (5) | 0.0566 (6) | 0.0352 (4) | 0.0009 (4) | 0.0006 (4) | −0.0001 (4) |
N2A | 0.0718 (7) | 0.0770 (8) | 0.0446 (5) | 0.0077 (6) | 0.0122 (5) | 0.0004 (5) |
N3A | 0.0895 (8) | 0.0789 (8) | 0.0385 (5) | 0.0072 (7) | 0.0060 (5) | −0.0012 (5) |
N4A | 0.0776 (7) | 0.0688 (7) | 0.0339 (5) | 0.0010 (6) | −0.0051 (4) | −0.0022 (4) |
C5A | 0.0570 (6) | 0.0509 (6) | 0.0344 (5) | −0.0019 (5) | −0.0068 (4) | 0.0002 (4) |
N5A | 0.0536 (6) | 0.0819 (8) | 0.0373 (5) | 0.0065 (5) | −0.0070 (4) | −0.0014 (5) |
C6A | 0.0487 (5) | 0.0471 (5) | 0.0396 (5) | 0.0043 (4) | −0.0033 (4) | 0.0003 (4) |
C7A | 0.0530 (6) | 0.0600 (7) | 0.0412 (5) | −0.0023 (5) | −0.0015 (4) | 0.0012 (5) |
C8A | 0.0676 (7) | 0.0647 (8) | 0.0404 (6) | 0.0095 (6) | −0.0008 (5) | 0.0050 (5) |
C9A | 0.0777 (9) | 0.0654 (8) | 0.0538 (7) | 0.0088 (7) | −0.0240 (6) | 0.0014 (6) |
C10A | 0.0749 (9) | 0.0787 (10) | 0.0833 (10) | −0.0182 (8) | −0.0356 (8) | 0.0147 (8) |
C11A | 0.0620 (7) | 0.0685 (8) | 0.0662 (8) | −0.0123 (6) | −0.0137 (6) | 0.0169 (7) |
N1B | 0.0636 (6) | 0.0555 (6) | 0.0357 (4) | 0.0042 (4) | −0.0025 (4) | 0.0047 (4) |
N2B | 0.1296 (12) | 0.0660 (8) | 0.0465 (6) | −0.0035 (8) | 0.0004 (7) | 0.0148 (5) |
N3B | 0.1412 (14) | 0.0803 (9) | 0.0439 (6) | 0.0189 (9) | −0.0079 (7) | 0.0137 (6) |
N4B | 0.0840 (8) | 0.0917 (9) | 0.0372 (5) | 0.0244 (7) | −0.0118 (5) | 0.0015 (5) |
C5B | 0.0514 (6) | 0.0728 (8) | 0.0349 (5) | 0.0111 (5) | −0.0060 (4) | −0.0019 (5) |
N5B | 0.0680 (7) | 0.1014 (10) | 0.0466 (6) | −0.0245 (7) | −0.0146 (5) | 0.0016 (6) |
C6B | 0.0515 (6) | 0.0473 (6) | 0.0380 (5) | 0.0011 (4) | −0.0030 (4) | −0.0001 (4) |
C7B | 0.0484 (6) | 0.0636 (7) | 0.0404 (5) | 0.0022 (5) | −0.0019 (4) | −0.0019 (5) |
C8B | 0.0690 (8) | 0.0704 (8) | 0.0376 (5) | −0.0011 (6) | −0.0018 (5) | −0.0024 (5) |
C9B | 0.0723 (8) | 0.0799 (10) | 0.0485 (7) | −0.0063 (7) | −0.0192 (6) | −0.0042 (6) |
C10B | 0.0554 (7) | 0.0922 (11) | 0.0721 (9) | −0.0155 (7) | −0.0159 (6) | −0.0035 (8) |
C11B | 0.0552 (7) | 0.0740 (9) | 0.0547 (7) | −0.0106 (6) | 0.0043 (5) | −0.0004 (6) |
Geometric parameters (Å, º) top
N1A—C5A | 1.3473 (15) | N1B—C5B | 1.3407 (16) |
N1A—N2A | 1.3681 (14) | N1B—N2B | 1.3651 (15) |
N1A—C6A | 1.4309 (13) | N1B—C6B | 1.4265 (14) |
N2A—N3A | 1.2793 (16) | N2B—N3B | 1.2840 (18) |
N3A—N4A | 1.3647 (18) | N3B—N4B | 1.359 (2) |
N4A—C5A | 1.3288 (13) | N4B—C5B | 1.3248 (14) |
C5A—N5A | 1.3374 (16) | C5B—N5B | 1.3351 (19) |
N5A—H5A | 0.890 (17) | N5B—H5C | 0.84 (2) |
N5A—H5B | 0.906 (15) | N5B—H5D | 0.88 (2) |
C6A—C7A | 1.3766 (16) | C6B—C11B | 1.3802 (18) |
C6A—C11A | 1.3772 (18) | C6B—C7B | 1.3809 (16) |
C7A—C8A | 1.3867 (16) | C7B—C8B | 1.3859 (16) |
C7A—H7A | 0.976 (15) | C7B—H7B | 0.945 (15) |
C8A—C9A | 1.367 (2) | C8B—C9B | 1.371 (2) |
C8A—H8A | 0.964 (17) | C8B—H8B | 0.992 (16) |
C9A—C10A | 1.374 (2) | C9B—C10B | 1.372 (2) |
C9A—H9A | 0.978 (19) | C9B—H9B | 0.987 (18) |
C10A—C11A | 1.389 (2) | C10B—C11B | 1.384 (2) |
C10A—H10A | 0.99 (2) | C10B—H10B | 0.963 (18) |
C11A—H11A | 0.999 (17) | C11B—H11B | 0.912 (15) |
| | | |
C5A—N1A—N2A | 108.15 (9) | C5B—N1B—N2B | 108.29 (10) |
C5A—N1A—C6A | 130.19 (9) | C5B—N1B—C6B | 130.93 (10) |
N2A—N1A—C6A | 121.66 (10) | N2B—N1B—C6B | 120.77 (11) |
N3A—N2A—N1A | 106.21 (11) | N3B—N2B—N1B | 105.72 (13) |
N2A—N3A—N4A | 111.80 (10) | N2B—N3B—N4B | 112.04 (12) |
C5A—N4A—N3A | 105.60 (10) | C5B—N4B—N3B | 105.36 (12) |
N4A—C5A—N5A | 125.71 (11) | N4B—C5B—N5B | 126.12 (13) |
N4A—C5A—N1A | 108.25 (11) | N4B—C5B—N1B | 108.59 (13) |
N5A—C5A—N1A | 126.03 (10) | N5B—C5B—N1B | 125.27 (10) |
C5A—N5A—H5A | 115.4 (10) | C5B—N5B—H5C | 117.5 (14) |
C5A—N5A—H5B | 119.1 (9) | C5B—N5B—H5D | 113.7 (14) |
H5A—N5A—H5B | 114.0 (14) | H5C—N5B—H5D | 118 (2) |
C7A—C6A—C11A | 121.28 (11) | C11B—C6B—C7B | 120.96 (11) |
C7A—C6A—N1A | 119.40 (10) | C11B—C6B—N1B | 119.44 (11) |
C11A—C6A—N1A | 119.32 (11) | C7B—C6B—N1B | 119.59 (10) |
C6A—C7A—C8A | 119.08 (12) | C6B—C7B—C8B | 119.18 (11) |
C6A—C7A—H7A | 119.0 (9) | C6B—C7B—H7B | 120.9 (9) |
C8A—C7A—H7A | 121.9 (9) | C8B—C7B—H7B | 119.9 (9) |
C9A—C8A—C7A | 120.29 (13) | C9B—C8B—C7B | 120.10 (12) |
C9A—C8A—H8A | 120.5 (10) | C9B—C8B—H8B | 121.7 (9) |
C7A—C8A—H8A | 119.2 (10) | C7B—C8B—H8B | 118.2 (9) |
C8A—C9A—C10A | 120.19 (13) | C8B—C9B—C10B | 120.38 (12) |
C8A—C9A—H9A | 117.1 (11) | C8B—C9B—H9B | 123.1 (10) |
C10A—C9A—H9A | 122.7 (11) | C10B—C9B—H9B | 116.5 (10) |
C9A—C10A—C11A | 120.49 (14) | C9B—C10B—C11B | 120.44 (13) |
C9A—C10A—H10A | 121.1 (13) | C9B—C10B—H10B | 121.8 (10) |
C11A—C10A—H10A | 118.5 (13) | C11B—C10B—H10B | 117.8 (10) |
C6A—C11A—C10A | 118.61 (13) | C6B—C11B—C10B | 118.93 (13) |
C6A—C11A—H11A | 118.3 (10) | C6B—C11B—H11B | 117.5 (9) |
C10A—C11A—H11A | 122.9 (10) | C10B—C11B—H11B | 123.5 (9) |
| | | |
C5A—N1A—N2A—N3A | 0.47 (14) | C5B—N1B—N2B—N3B | −0.24 (16) |
C6A—N1A—N2A—N3A | −179.27 (11) | C6B—N1B—N2B—N3B | 178.71 (12) |
N1A—N2A—N3A—N4A | −0.11 (15) | N1B—N2B—N3B—N4B | 0.37 (18) |
N2A—N3A—N4A—C5A | −0.28 (16) | N2B—N3B—N4B—C5B | −0.36 (18) |
N3A—N4A—C5A—N5A | 179.16 (13) | N3B—N4B—C5B—N5B | −178.35 (14) |
N3A—N4A—C5A—N1A | 0.56 (14) | N3B—N4B—C5B—N1B | 0.18 (15) |
N2A—N1A—C5A—N4A | −0.65 (14) | N2B—N1B—C5B—N4B | 0.03 (15) |
C6A—N1A—C5A—N4A | 179.05 (11) | C6B—N1B—C5B—N4B | −178.78 (11) |
N2A—N1A—C5A—N5A | −179.24 (13) | N2B—N1B—C5B—N5B | 178.58 (14) |
C6A—N1A—C5A—N5A | 0.5 (2) | C6B—N1B—C5B—N5B | −0.2 (2) |
C5A—N1A—C6A—C7A | −50.62 (17) | C5B—N1B—C6B—C11B | −136.16 (14) |
N2A—N1A—C6A—C7A | 129.05 (13) | N2B—N1B—C6B—C11B | 45.15 (17) |
C5A—N1A—C6A—C11A | 129.70 (15) | C5B—N1B—C6B—C7B | 45.35 (18) |
N2A—N1A—C6A—C11A | −50.63 (16) | N2B—N1B—C6B—C7B | −133.34 (13) |
C11A—C6A—C7A—C8A | −2.17 (19) | C11B—C6B—C7B—C8B | 1.52 (19) |
N1A—C6A—C7A—C8A | 178.16 (11) | N1B—C6B—C7B—C8B | 179.99 (11) |
C6A—C7A—C8A—C9A | 0.21 (19) | C6B—C7B—C8B—C9B | −1.1 (2) |
C7A—C8A—C9A—C10A | 1.9 (2) | C7B—C8B—C9B—C10B | −0.3 (2) |
C8A—C9A—C10A—C11A | −2.1 (3) | C8B—C9B—C10B—C11B | 1.4 (3) |
C7A—C6A—C11A—C10A | 2.0 (2) | C7B—C6B—C11B—C10B | −0.5 (2) |
N1A—C6A—C11A—C10A | −178.35 (13) | N1B—C6B—C11B—C10B | −178.93 (13) |
C9A—C10A—C11A—C6A | 0.2 (3) | C9B—C10B—C11B—C6B | −1.0 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N5A—H5A···N4Ai | 0.89 (2) | 2.194 (18) | 3.0777 (17) | 172 (12) |
N5A—H5B···N4Bii | 0.91 (2) | 2.209 (16) | 3.0975 (16) | 166.7 (13) |
N5B—H5C···N4Aiii | 0.84 (2) | 2.50 (2) | 3.2935 (19) | 157 (2) |
N5B—H5C···N3Aiii | 0.84 (2) | 2.62 (2) | 3.423 (2) | 161 (2) |
N5B—H5D···N4Biv | 0.88 (2) | 2.47 (2) | 3.3493 (19) | 173 (2) |
N5B—H5D···N3Biv | 0.88 (2) | 2.37 (2) | 3.181 (2) | 153 (2) |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) x, y−1, z; (iii) x, −y+3/2, z−1/2; (iv) −x+1, y+1/2, −z+1/2. |
(II) 5-amino-1-(1-naphthyl)tetrazole
top
Crystal data top
C11H9N5 | F(000) = 440 |
Mr = 211.23 | Dx = 1.341 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 12.176 (5) Å | θ = 17.8–21.0° |
b = 7.3611 (18) Å | µ = 0.09 mm−1 |
c = 11.699 (3) Å | T = 293 K |
β = 93.85 (3)° | Rectangular prism, colourless |
V = 1046.2 (6) Å3 | 0.56 × 0.44 × 0.12 mm |
Z = 4 | |
Data collection top
Nicolet R3m four-circle diffractometer | Rint = 0.016 |
Radiation source: fine-focus sealed tube | θmax = 30.1°, θmin = 1.7° |
Graphite monochromator | h = −17→17 |
ω/2θ scans | k = −10→0 |
3326 measured reflections | l = 0→16 |
3078 independent reflections | 3 standard reflections every 100 reflections |
2055 reflections with I > 2σ(I) | intensity decay: none |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.062 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.207 | All H-atom parameters refined |
S = 1.03 | w = 1/[σ2(Fo2) + (0.1428P)2] where P = (Fo2 + 2Fc2)/3 |
3078 reflections | (Δ/σ)max < 0.001 |
181 parameters | Δρmax = 0.37 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
Crystal data top
C11H9N5 | V = 1046.2 (6) Å3 |
Mr = 211.23 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.176 (5) Å | µ = 0.09 mm−1 |
b = 7.3611 (18) Å | T = 293 K |
c = 11.699 (3) Å | 0.56 × 0.44 × 0.12 mm |
β = 93.85 (3)° | |
Data collection top
Nicolet R3m four-circle diffractometer | Rint = 0.016 |
3326 measured reflections | 3 standard reflections every 100 reflections |
3078 independent reflections | intensity decay: none |
2055 reflections with I > 2σ(I) | |
Refinement top
R[F2 > 2σ(F2)] = 0.062 | 0 restraints |
wR(F2) = 0.207 | All H-atom parameters refined |
S = 1.03 | Δρmax = 0.37 e Å−3 |
3078 reflections | Δρmin = −0.24 e Å−3 |
181 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.33859 (10) | 0.13716 (17) | 0.41718 (9) | 0.0456 (3) | |
N2 | 0.33242 (12) | 0.04963 (19) | 0.51949 (11) | 0.0545 (4) | |
N3 | 0.39166 (12) | 0.1420 (2) | 0.59291 (11) | 0.0558 (4) | |
N4 | 0.43910 (11) | 0.28837 (19) | 0.54460 (10) | 0.0517 (3) | |
N5 | 0.43099 (15) | 0.4005 (2) | 0.35409 (12) | 0.0682 (5) | |
H5A | 0.4104 (15) | 0.385 (3) | 0.2850 (17) | 0.052 (5)* | |
H5B | 0.4753 (15) | 0.493 (3) | 0.3762 (18) | 0.064 (5)* | |
C5 | 0.40500 (12) | 0.2831 (2) | 0.43444 (11) | 0.0461 (3) | |
C6 | 0.28715 (11) | 0.06631 (19) | 0.31331 (12) | 0.0436 (3) | |
C7 | 0.31843 (15) | −0.0993 (2) | 0.27559 (16) | 0.0578 (4) | |
H7 | 0.374 (2) | −0.165 (4) | 0.318 (2) | 0.102 (8)* | |
C8 | 0.27055 (18) | −0.1688 (3) | 0.17235 (19) | 0.0719 (6) | |
H8 | 0.292 (2) | −0.282 (4) | 0.147 (2) | 0.092 (8)* | |
C9 | 0.19499 (16) | −0.0705 (3) | 0.10866 (17) | 0.0687 (5) | |
H9 | 0.1602 (18) | −0.101 (3) | 0.030 (2) | 0.078 (7)* | |
C10 | 0.15941 (12) | 0.1006 (2) | 0.14625 (13) | 0.0538 (4) | |
C11 | 0.07670 (15) | 0.2033 (4) | 0.08406 (17) | 0.0727 (6) | |
H11 | 0.0442 (19) | 0.160 (3) | 0.011 (2) | 0.082 (7)* | |
C12 | 0.03957 (18) | 0.3618 (4) | 0.1245 (2) | 0.0819 (7) | |
H12 | −0.023 (2) | 0.426 (4) | 0.081 (3) | 0.098 (7)* | |
C13 | 0.08561 (18) | 0.4317 (3) | 0.2271 (2) | 0.0754 (6) | |
H13 | 0.069 (2) | 0.539 (4) | 0.249 (3) | 0.105 (9)* | |
C14 | 0.16689 (15) | 0.3408 (2) | 0.29027 (16) | 0.0567 (4) | |
H14 | 0.1982 (16) | 0.384 (3) | 0.3629 (18) | 0.064 (6)* | |
C15 | 0.20520 (11) | 0.1717 (2) | 0.25190 (11) | 0.0437 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0574 (7) | 0.0411 (6) | 0.0374 (6) | −0.0051 (5) | −0.0034 (5) | 0.0021 (4) |
N2 | 0.0727 (8) | 0.0475 (7) | 0.0428 (6) | −0.0025 (6) | 0.0002 (6) | 0.0097 (5) |
N3 | 0.0714 (8) | 0.0557 (7) | 0.0393 (6) | 0.0011 (6) | −0.0035 (6) | 0.0063 (5) |
N4 | 0.0644 (7) | 0.0538 (8) | 0.0358 (6) | −0.0053 (6) | −0.0054 (5) | 0.0002 (5) |
N5 | 0.0942 (11) | 0.0729 (10) | 0.0357 (6) | −0.0397 (9) | −0.0093 (7) | 0.0043 (6) |
C5 | 0.0556 (7) | 0.0455 (7) | 0.0365 (6) | −0.0067 (6) | −0.0031 (5) | −0.0017 (5) |
C6 | 0.0495 (7) | 0.0384 (6) | 0.0423 (6) | −0.0040 (5) | −0.0005 (5) | −0.0034 (5) |
C7 | 0.0615 (9) | 0.0408 (8) | 0.0701 (10) | 0.0027 (6) | −0.0031 (8) | −0.0084 (7) |
C8 | 0.0809 (12) | 0.0537 (10) | 0.0808 (13) | −0.0060 (9) | 0.0026 (10) | −0.0279 (9) |
C9 | 0.0702 (10) | 0.0732 (12) | 0.0616 (10) | −0.0215 (9) | −0.0022 (8) | −0.0226 (9) |
C10 | 0.0485 (7) | 0.0666 (10) | 0.0455 (7) | −0.0113 (7) | −0.0018 (6) | −0.0003 (7) |
C11 | 0.0551 (9) | 0.1079 (18) | 0.0533 (9) | −0.0088 (10) | −0.0092 (7) | 0.0171 (10) |
C12 | 0.0649 (11) | 0.1036 (18) | 0.0766 (13) | 0.0154 (11) | −0.0006 (10) | 0.0355 (13) |
C13 | 0.0744 (11) | 0.0676 (12) | 0.0856 (14) | 0.0231 (10) | 0.0163 (10) | 0.0201 (10) |
C14 | 0.0632 (9) | 0.0523 (9) | 0.0554 (9) | 0.0089 (7) | 0.0107 (7) | 0.0023 (7) |
C15 | 0.0460 (6) | 0.0444 (7) | 0.0406 (6) | −0.0029 (5) | 0.0030 (5) | 0.0014 (5) |
Geometric parameters (Å, º) top
N1—C5 | 1.3513 (19) | C8—H8 | 0.93 (3) |
N1—N2 | 1.3658 (17) | C9—C10 | 1.411 (3) |
N1—C6 | 1.4278 (17) | C9—H9 | 1.02 (2) |
N2—N3 | 1.2796 (19) | C10—C11 | 1.420 (3) |
N3—N4 | 1.3628 (19) | C10—C15 | 1.421 (2) |
N4—C5 | 1.3277 (17) | C11—C12 | 1.348 (4) |
N5—C5 | 1.3309 (19) | C11—H11 | 0.97 (2) |
N5—H5A | 0.84 (2) | C12—C13 | 1.389 (4) |
N5—H5B | 0.90 (2) | C12—H12 | 1.01 (3) |
C6—C7 | 1.359 (2) | C13—C14 | 1.369 (3) |
C6—C15 | 1.420 (2) | C13—H13 | 0.86 (3) |
C7—C8 | 1.402 (3) | C14—C15 | 1.413 (2) |
C7—H7 | 0.95 (3) | C14—H14 | 0.96 (2) |
C8—C9 | 1.354 (3) | | |
| | | |
C5—N1—N2 | 108.15 (12) | C8—C9—C10 | 121.12 (16) |
C5—N1—C6 | 129.89 (12) | C8—C9—H9 | 127.6 (13) |
N2—N1—C6 | 121.79 (12) | C10—C9—H9 | 111.2 (13) |
N3—N2—N1 | 106.01 (12) | C9—C10—C11 | 122.50 (17) |
N2—N3—N4 | 112.17 (12) | C9—C10—C15 | 119.25 (15) |
C5—N4—N3 | 105.40 (12) | C11—C10—C15 | 118.22 (18) |
C5—N5—H5A | 121.6 (13) | C12—C11—C10 | 121.57 (19) |
C5—N5—H5B | 117.2 (13) | C12—C11—H11 | 117.9 (15) |
H5A—N5—H5B | 121.0 (19) | C10—C11—H11 | 120.5 (15) |
N4—C5—N5 | 126.35 (14) | C11—C12—C13 | 119.91 (18) |
N4—C5—N1 | 108.27 (13) | C11—C12—H12 | 119.5 (16) |
N5—C5—N1 | 125.38 (13) | C13—C12—H12 | 120.5 (16) |
C7—C6—C15 | 121.87 (14) | C14—C13—C12 | 121.4 (2) |
C7—C6—N1 | 119.17 (13) | C14—C13—H13 | 118 (2) |
C15—C6—N1 | 118.96 (13) | C12—C13—H13 | 120 (2) |
C6—C7—C8 | 119.83 (16) | C13—C14—C15 | 120.08 (18) |
C6—C7—H7 | 119.5 (18) | C13—C14—H14 | 122.9 (12) |
C8—C7—H7 | 120.6 (18) | C15—C14—H14 | 117.0 (12) |
C9—C8—C7 | 120.46 (18) | C14—C15—C6 | 123.78 (13) |
C9—C8—H8 | 119.7 (17) | C14—C15—C10 | 118.82 (14) |
C7—C8—H8 | 119.8 (17) | C6—C15—C10 | 117.40 (14) |
| | | |
C5—N1—N2—N3 | 0.68 (17) | C8—C9—C10—C11 | −177.06 (18) |
C6—N1—N2—N3 | 176.35 (13) | C8—C9—C10—C15 | 1.0 (3) |
N1—N2—N3—N4 | −0.65 (18) | C9—C10—C11—C12 | 176.30 (18) |
N2—N3—N4—C5 | 0.37 (18) | C15—C10—C11—C12 | −1.8 (3) |
N3—N4—C5—N5 | 179.97 (17) | C10—C11—C12—C13 | 2.7 (3) |
N3—N4—C5—N1 | 0.08 (17) | C11—C12—C13—C14 | −1.5 (3) |
N2—N1—C5—N4 | −0.47 (17) | C12—C13—C14—C15 | −0.4 (3) |
C6—N1—C5—N4 | −175.67 (14) | C13—C14—C15—C6 | −178.40 (16) |
N2—N1—C5—N5 | 179.64 (17) | C13—C14—C15—C10 | 1.2 (2) |
C6—N1—C5—N5 | 4.4 (3) | C7—C6—C15—C14 | 177.25 (15) |
C5—N1—C6—C7 | 113.83 (19) | N1—C6—C15—C14 | −3.2 (2) |
N2—N1—C6—C7 | −60.8 (2) | C7—C6—C15—C10 | −2.4 (2) |
C5—N1—C6—C15 | −65.7 (2) | N1—C6—C15—C10 | 177.18 (12) |
N2—N1—C6—C15 | 119.63 (16) | C9—C10—C15—C14 | −178.32 (15) |
C15—C6—C7—C8 | 1.1 (3) | C11—C10—C15—C14 | −0.1 (2) |
N1—C6—C7—C8 | −178.49 (16) | C9—C10—C15—C6 | 1.3 (2) |
C6—C7—C8—C9 | 1.4 (3) | C11—C10—C15—C6 | 179.50 (14) |
C7—C8—C9—C10 | −2.4 (3) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5A···N3i | 0.84 (2) | 2.25 (2) | 3.077 (2) | 168 (2) |
N5—H5B···N4ii | 0.90 (2) | 2.10 (2) | 2.983 (2) | 169 (2) |
C8—H8···N2iii | 0.93 (3) | 2.54 (3) | 3.436 (2) | 163 (2) |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+1, −y+1, −z+1; (iii) x, −y−1/2, z−1/2. |
Experimental details
| (I) | (II) |
Crystal data |
Chemical formula | C7H7N5 | C11H9N5 |
Mr | 161.18 | 211.23 |
Crystal system, space group | Monoclinic, P21/c | Monoclinic, P21/c |
Temperature (K) | 293 | 293 |
a, b, c (Å) | 11.619 (3), 7.342 (2), 18.124 (3) | 12.176 (5), 7.3611 (18), 11.699 (3) |
β (°) | 92.202 (19) | 93.85 (3) |
V (Å3) | 1545.0 (6) | 1046.2 (6) |
Z | 8 | 4 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.10 | 0.09 |
Crystal size (mm) | 0.60 × 0.40 × 0.24 | 0.56 × 0.44 × 0.12 |
|
Data collection |
Diffractometer | Nicolet R3m four-circle diffractometer | Nicolet R3m four-circle diffractometer |
Absorption correction | – | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4745, 4542, 3154 | 3326, 3078, 2055 |
Rint | 0.030 | 0.016 |
(sin θ/λ)max (Å−1) | 0.705 | 0.705 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.145, 1.05 | 0.062, 0.207, 1.03 |
No. of reflections | 4542 | 3078 |
No. of parameters | 274 | 181 |
H-atom treatment | All H-atom parameters refined | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.19, −0.24 | 0.37, −0.24 |
Selected geometric parameters (Å, º) for (I) topN1A—C5A | 1.3473 (15) | N1B—C5B | 1.3407 (16) |
N1A—N2A | 1.3681 (14) | N1B—N2B | 1.3651 (15) |
N1A—C6A | 1.4309 (13) | N1B—C6B | 1.4265 (14) |
N2A—N3A | 1.2793 (16) | N2B—N3B | 1.2840 (18) |
N3A—N4A | 1.3647 (18) | N3B—N4B | 1.359 (2) |
N4A—C5A | 1.3288 (13) | N4B—C5B | 1.3248 (14) |
C5A—N5A | 1.3374 (16) | C5B—N5B | 1.3351 (19) |
| | | |
C5A—N1A—N2A | 108.15 (9) | C5B—N1B—N2B | 108.29 (10) |
N3A—N2A—N1A | 106.21 (11) | N3B—N2B—N1B | 105.72 (13) |
N2A—N3A—N4A | 111.80 (10) | N2B—N3B—N4B | 112.04 (12) |
C5A—N4A—N3A | 105.60 (10) | C5B—N4B—N3B | 105.36 (12) |
N4A—C5A—N1A | 108.25 (11) | N4B—C5B—N1B | 108.59 (13) |
C5A—N5A—H5A | 115.4 (10) | C5B—N5B—H5C | 117.5 (14) |
C5A—N5A—H5B | 119.1 (9) | C5B—N5B—H5D | 113.7 (14) |
H5A—N5A—H5B | 114.0 (14) | H5C—N5B—H5D | 118 (2) |
Hydrogen-bond geometry (Å, º) for (I) top
D—H···A | D—H | H···A | D···A | D—H···A |
N5A—H5A···N4Ai | 0.89 (2) | 2.194 (18) | 3.0777 (17) | 172 (12) |
N5A—H5B···N4Bii | 0.91 (2) | 2.209 (16) | 3.0975 (16) | 166.7 (13) |
N5B—H5C···N4Aiii | 0.84 (2) | 2.50 (2) | 3.2935 (19) | 157 (2) |
N5B—H5C···N3Aiii | 0.84 (2) | 2.62 (2) | 3.423 (2) | 161 (2) |
N5B—H5D···N4Biv | 0.88 (2) | 2.47 (2) | 3.3493 (19) | 173 (2) |
N5B—H5D···N3Biv | 0.88 (2) | 2.37 (2) | 3.181 (2) | 153 (2) |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) x, y−1, z; (iii) x, −y+3/2, z−1/2; (iv) −x+1, y+1/2, −z+1/2. |
Selected geometric parameters (Å, º) for (II) topN1—C5 | 1.3513 (19) | N3—N4 | 1.3628 (19) |
N1—N2 | 1.3658 (17) | N4—C5 | 1.3277 (17) |
N1—C6 | 1.4278 (17) | N5—C5 | 1.3309 (19) |
N2—N3 | 1.2796 (19) | | |
| | | |
C5—N1—N2 | 108.15 (12) | C5—N5—H5A | 121.6 (13) |
N3—N2—N1 | 106.01 (12) | C5—N5—H5B | 117.2 (13) |
N2—N3—N4 | 112.17 (12) | H5A—N5—H5B | 121.0 (19) |
C5—N4—N3 | 105.40 (12) | N4—C5—N1 | 108.27 (13) |
Hydrogen-bond geometry (Å, º) for (II) top
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5A···N3i | 0.84 (2) | 2.25 (2) | 3.077 (2) | 168 (2) |
N5—H5B···N4ii | 0.90 (2) | 2.10 (2) | 2.983 (2) | 169 (2) |
C8—H8···N2iii | 0.93 (3) | 2.54 (3) | 3.436 (2) | 163 (2) |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+1, −y+1, −z+1; (iii) x, −y−1/2, z−1/2. |
Mean values of tetrazole ring bond distances (Å) for 1-R-5H- and 1-R-5-aminotetrazoles (R = substituted alkyl or aryl) as a result of a CSD survey topBond | 1-R-5H-tetrazoles (8 hits) | 1-R-5-aminotetrazoles (5 hits) |
N1—N2 | 1.347 (2) | 1.361 (5) |
N1—C5 | 1.333 (2) | 1.333 (10) |
N2═N3 | 1.294 (2) | 1.273 (4) |
N3—N4 | 1.354 (2) | 1.360 (2) |
N4═C5 | 1.307 (2) | 1.319 (4) |
Note: s.u. values on means values are given in parentheses. |
5-Amino-1-aryltetrazoles have attracted much attention because of their biological activity (Wittenberger, 1994; Schelenz, 2000, and references therein). Thus, 5-amino-1-phenyltetrazole, (I), reveals anti-inflammatory, muscle relaxation and central nervous system (CNS) depressant properties. Recently, algistatic activity of 5-amino-1-aryltetrazoles, including 5-amino-1-(1-naphthyl)tetrazole, (II), was reported (Schelenz, 2000; Katritzky et al., 2001). Although a large body of information concerned with synthesis techniques and biological activities of 5-amino-1-aryltetrazoles is available, no systematic investigations of their structures have been performed; only one compound, namely 1-(4-methoxyphenyl)-5-(phenylamino)tetrazole (Brigas et al., 2001), was found in the Cambridge Structural Database (CSD; Version 5.24, November 2002 release; Allen, 2002) in a search for 1-aryl-5-aminotetrazoles. However, structural information might be very important for understanding the mechanisms of biological activity of these compounds. We present here the structures of two examples of 1-aryl-5-aminotetrazoles, the above-mentioned compounds (I) and (II). The asymmetric unit of (I) consists of two independent molecules, which are denoted as A and B.
The tetrazole rings are planar to within 0.0024 (8) and 0.0014 (9) Å for molecules A and B, respectively, of (I), and 0.0026 (9) Å for (II). The tetrazole rings are not coplanar with the phenyl or naphthyl fragments in (I) and (II). The dihedral angles between the least-squares planes of the tetrazole and aryl systems in (I) are 50.58 (5) and 45.19 (7)° for A and B, respectively, and 64.14 (5)° in (II).
The molecule of (II) may exist in two forms, namely the s-trans-(N2)-conformer II and the s-cis-(N2)-conformer IIa, which are related by rotational isomerism. Density functional theory (DFT) calculations of the relative energies of conformers II and IIa in the gas phase, performed using the B3LYP model (Becke, 1993) and a standard 6–31 G* basis set (Hehre et al., 1972) with the NWCHEM package (Harrison et al., 2002), showed that conformer IIa is more stable by 2.29 kJ mol−1. However, it is conformer II which occurs in the crystal of (II). It seems probable that the magnitude of the crystal packing energy overlaps the energy difference for the s-trans-(N2)- and s-cis-(N2)-conformers of (II).
The N5 atoms of the amino groups in (I) and (II) display features of sp2 hybridization. The angle sums around these atoms are ca 349° for both molecules in (I) and ca 360° in (II) (Tables 1 and 3). In (I), the amino atoms are located close to the adjacent tetrazole ring plane, with a maximum deviations of 0.25 (2) (for atom H5A in molecule A) and 0.26 (2) Å (for atom H5C in molecule B). In (II), the corresponding maximum deviation of 0.06 (2) Å occurs for atom H5A. Moreover, the C5—N5 bond lengths in (I) and (II) (Tables 1 and 3) are close to those for C═N double bonds.
The corresponding bond lengths and angles of the tetrazole rings of (I) and (II) are very similar (Tables 1 and 3). Comparison of the tetrazole-ring characteristics of (I) and (II) with those of 5-aminotetrazole (Bray & White, 1979) did not reveal any influence of the aryl substitutents on the ring geometry. Taking into account the results of the X-ray investigation for 1-phenyltetrazole (Matsunaga et al., 1999), it may be found that substitution of the H atom at ring atom C5 by the amino group in the molecule of (I) results in a shortening of the N2═N3 bond by 0.019 Å, but elongation of the N4═C5 and N1—N2 bonds by 0.027 and 0.020 Å, respectively. The N1—C5 and N3—N4 bond lengths are unaffected by this substitution.
DFT calculations on 1-phenyltetrazole and 5-amino-1-phenyltetrazole, 1-(1-naphthyl)tetrazole and 5-amino-1-(1-naphthyl)tetrazole showed that introducing a 5-amino group shortened N2═N3 by 0.008 Å in (I), by 0.008 Å in (II), elongated N4═C5 by 0.007 and 0.008 Å in (I) and (II), respectively, and elongated N1—N2 by 0.019 Å for (I) and 0.020 Å for (II), in agreement with the results of the structure determination.
To clarify whether this is a general effect, we examined the tetrazole-ring geometries of 1-R-5-amino- and 1-R-5H-tetrazoles where R is a substituted alkyl or aryl group, using the CSD. As can be seen from Table 5, amino substitution tends to shorten N2═N3 and elongate N1—N2 and N4═C5, while there is no marked trend for N1—C5 and N3—N4. These results and those obtained in the present work allow us to consider the geometric influence of the amino group on features of the tetrazole rings of 5-aminotetrazoles.
The elongation of the C5═N4 and the shortening of the C5—NH2 bonds relative to `normal' C—N bond lengths, and the approximately trigonal planar geometry of the 5-amino N atoms in 5-aminotetrazoles agree with considerable bond conjugation in the H2N—C5═N4 fragments. However, the mechanism whereby N1—N2 is elongated and N2═N3 shortened in 5-aminotetrazoles relative to 5H-tetrazoles is not clear and may be a topic of future investigations.
Both structures exhibit intermolecular N—H···N hydrogen bonds between the amino groups and atoms N3 and N4 of the tetrazole rings (Tables 2 and 4). These hydrogen bonds are responsible for the formation of polymeric two-dimensional networks parallel to the bc plane in (I) and (II). The networks are linked only by van der Waals interactions. The hydrogen-bonding motifs in (I) and (II) differ to some extent. In (I), each molecule A is hydrogen bonded to three neighbours, viz. one A and two B molecules, forming an eight-membered hydrogen-bonded ring by binding with molecule A (Fig. 3). Each molecule B is hydrogen bonded to four neighbours, viz. two A and two B molecules. All hydrogen bonds involving the amino groups of molecules B are bifurcated. In (II), each molecule is hydrogen bonded with three others, eight-membered hydrogen-bonded rings being formed by bonding with one of them (Fig. 4). In addition to the two-dimensional network, the structure also contains non-classical C8—H8···N2 interactions.