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Four crystal structures of 2-amino-N-(di­methyl­phen­oxy­eth­yl)propan-1-ol derivatives, characterized by X-ray diffraction analysis, are reported. The free base (R,S)-2-amino-N-[2-(2,3-di­methyl­phen­oxy)eth­yl]propan-1-ol, C13H21NO2, 1, crystallizes in the space group P21/n, with two independent mol­ecules in the asymmetric unit. The hydro­chloride, (S)-N-[2-(2,6-di­methyl­phen­oxy)eth­yl]-1-hy­droxy­propan-2-aminium chloride, C13H22NO2+·Cl, 2c, crystallizes in the space group P21, with one cation and one chloride anion in the asymmetric unit. The asymmetric unit of two salts of 2-picolinic acid, namely, (R,S)-N-[2-(2,3-di­methyl­phen­oxy)eth­yl]-1-hy­droxy­propan-2-aminium pyridine-2-carboxyl­ate, C13H22NO2+·C6H4NO2, 1p, and (R)-N-[2-(2,6-di­methyl­phen­oxy)eth­yl]-1-hy­droxy­propan-2-aminium pyridine-2-carboxyl­ate, C13H22NO2+·C6H4NO2, 2p, consists of one cation and one 2-picolinate anion. Salt 1p crystallizes in the triclinic centrosymmetric space group P\overline 1, while salt 2p crystallizes in the space group P41212. The conformations of the amine fragments are contrasted and that of 2p is found to have an unusual anti­periplanar arrangement about the ether group. The crystal packing of 1 and 2c is dominated by hydrogen-bonded chains, while the structures of the 2-picolinate salts have hydrogen-bonded rings as the major features. In both salts with 2-picolinic acid, the specific R12(5) hydrogen-bonding motif is observed. Structural studies have been enriched by the generation of fingerprint plots derived from Hirshfeld surfaces.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S2053229620008244/ky3196sup1.cif
Contains datablocks global, 1, 1p, 2c, 2p

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229620008244/ky31961sup2.hkl
Contains datablock 1

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229620008244/ky31961psup3.hkl
Contains datablock 1p

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229620008244/ky31962csup4.hkl
Contains datablock 2c

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229620008244/ky31962psup5.hkl
Contains datablock 2p

CCDC references: 2011434; 2011435; 2011436; 2011437

Computing details top

Data collection: CrysAlis PRO (Rigaku OD, 2018) for (1), (1p); CrysAlis PRO (Rigaku OD, 2019) for (2c); CrysAlis PRO (Rigaku OD, 2015) for (2p). Cell refinement: CrysAlis PRO (Rigaku OD, 2018) for (1), (1p); CrysAlis PRO (Rigaku OD, 2019) for (2c); CrysAlis PRO (Rigaku OD, 2015) for (2p). Data reduction: CrysAlis PRO (Rigaku OD, 2018) for (1), (1p); CrysAlis PRO (Rigaku OD, 2019) for (2c); CrysAlis PRO (Rigaku OD, 2015) for (2p). Program(s) used to refine structure: SIR2014 (Burla et al., 2015) and SHELXL2018 (Sheldrick, 2015) for (1), (1p), (2p); SIR2014 (Burla et al., 2015) and SHELXL2013 (Sheldrick, 2015) for (2c). Molecular graphics: ORTEP-3 (Farrugia, 2012) and Mercury (Macrae et al., 2020) for (1). Software used to prepare material for publication: publCIF (Westrip, 2010) for (1).

(R,S)-2-Amino-N-[2-(2,3-dimethylphenoxy)ethyl]propan-1-ol (1) top
Crystal data top
C13H21NO2F(000) = 976
Mr = 223.31Dx = 1.141 Mg m3
Monoclinic, P21/nCu Kα radiation, λ = 1.54184 Å
Hall symbol: -P 2ynCell parameters from 16084 reflections
a = 7.2657 (1) Åθ = 3.1–76.3°
b = 14.4917 (2) ŵ = 0.60 mm1
c = 24.6836 (3) ÅT = 100 K
β = 90.042 (1)°Prism, colourless
V = 2598.99 (6) Å30.47 × 0.20 × 0.06 mm
Z = 8
Data collection top
Rigaku XtaLAB Synergy Dualflex
diffractometer with a HyPix detector
5363 independent reflections
Radiation source: micro-focus sealed X-ray tube, PhotonJet (Cu) X-ray Source4898 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.040
ω scansθmax = 76.6°, θmin = 3.5°
Absorption correction: gaussian
(CrysAlis PRO; Rigaku OD, 2018)
h = 79
Tmin = 0.471, Tmax = 1k = 1817
32612 measured reflectionsl = 2831
Refinement top
Refinement on F29 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.053H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.153 w = 1/[σ2(Fo2) + (0.0751P)2 + 1.2737P]
where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max < 0.001
5363 reflectionsΔρmax = 0.28 e Å3
322 parametersΔρmin = 0.23 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
C1A0.0437 (2)0.44012 (12)0.08125 (7)0.0283 (4)0.937 (2)
H1A0.0179690.4695640.0509630.034*0.937 (2)
H1B0.0803710.3786790.0700210.034*0.937 (2)
C1B0.0377 (2)0.23282 (11)0.57341 (6)0.0293 (3)
H1C0.0297340.2575270.542730.035*
H1D0.0703040.1694370.5652130.035*
C2A0.2128 (2)0.49546 (11)0.09665 (7)0.0259 (4)0.937 (2)
H2A0.1744250.5560550.1101770.031*0.937 (2)
C3A0.3365 (2)0.50848 (12)0.04764 (7)0.0309 (4)0.937 (2)
H3A0.4454130.5414430.0582020.046*0.937 (2)
H3B0.2719960.5429560.0203870.046*0.937 (2)
H3C0.3704150.4492480.0333560.046*0.937 (2)
C2B0.2115 (2)0.28892 (10)0.58219 (6)0.0272 (3)
H2B0.1773140.3527580.5905610.033*
C3B0.3300 (2)0.28811 (13)0.53161 (7)0.0347 (4)
H3E0.2629730.3151720.5020910.052*
H3F0.3618960.2256440.5226790.052*
H3D0.440220.3229890.5380530.052*
C4A0.4648 (2)0.49825 (11)0.16247 (6)0.0298 (3)
H4A0.4279450.562060.1672780.036*
H4B0.5661690.4969250.1369240.036*
C4B0.4640 (2)0.30650 (11)0.64744 (6)0.0274 (3)
H4C0.4239670.3700920.6508230.033*
H4D0.5618170.3042990.6207410.033*
C5A0.5281 (2)0.45975 (11)0.21589 (6)0.0298 (3)
H5A0.5590860.3949540.2121420.036*
H5B0.6363120.4926050.228490.036*
C5B0.5361 (2)0.27327 (11)0.70108 (6)0.0271 (3)
H5C0.5730690.2090890.6985850.033*
H5D0.6418690.3095920.7120590.033*
C6A0.4179 (2)0.46251 (10)0.30764 (6)0.0249 (3)
C6B0.4295 (2)0.27122 (10)0.79312 (6)0.0241 (3)
C7A0.2797 (2)0.49223 (10)0.34341 (6)0.0252 (3)
C7B0.29152 (19)0.29757 (10)0.82965 (6)0.0245 (3)
C8A0.3122 (2)0.48768 (10)0.39894 (6)0.0272 (3)
C8B0.3259 (2)0.29009 (10)0.88502 (6)0.0278 (3)
C9A0.4805 (2)0.45377 (10)0.41815 (6)0.0290 (3)
H9A0.502690.4515590.4552420.035*
C9B0.4956 (2)0.25635 (11)0.90307 (6)0.0300 (3)
H9B0.5186730.2519990.9400450.036*
C10A0.6141 (2)0.42354 (10)0.38239 (7)0.0304 (3)
H10A0.7248390.4006510.3956780.036*
C10B0.6294 (2)0.22940 (10)0.86651 (7)0.0294 (3)
H10B0.7412390.206590.879060.035*
C11A0.5845 (2)0.42701 (10)0.32713 (6)0.0286 (3)
H11A0.6739870.4060440.3031960.034*
C11B0.5977 (2)0.23621 (10)0.81134 (6)0.0271 (3)
H11B0.6872730.2177160.7867150.033*
C12A0.0995 (2)0.52835 (12)0.32150 (7)0.0314 (3)
H12A0.101570.5264420.2826320.047*
H12B0.0002780.4907370.3346220.047*
H12C0.0819210.5908460.3333270.047*
C12B0.1104 (2)0.33463 (12)0.80889 (6)0.0311 (3)
H12F0.0971510.3979280.8196710.047*
H12E0.0111950.2989490.8237290.047*
H12D0.1077940.3305640.7700780.047*
C13A0.1679 (2)0.51892 (13)0.43868 (7)0.0371 (4)
H13A0.2131140.5110050.4749370.056*
H13B0.1402450.5828540.4325640.056*
H13C0.0583230.4828030.4338740.056*
C13B0.1824 (2)0.31923 (13)0.92566 (7)0.0369 (4)
H13F0.0711940.2849640.9195770.055*
H13E0.1578790.3839650.9216530.055*
H13D0.2267040.3073060.9616370.055*
N1A0.30906 (17)0.44523 (8)0.14022 (5)0.0249 (3)
N1B0.30906 (16)0.24925 (8)0.62906 (5)0.0233 (3)
O1A0.07903 (17)0.43371 (9)0.12559 (7)0.0317 (3)0.937 (2)
H1AO0.124 (3)0.3775 (8)0.1272 (8)0.038*0.937
O1B0.07491 (15)0.23508 (8)0.61988 (5)0.0314 (3)
O2A0.37972 (14)0.47099 (8)0.25351 (4)0.0297 (3)
O2B0.38951 (14)0.28358 (8)0.73942 (4)0.0281 (3)
C2A'0.260 (3)0.4638 (13)0.0820 (5)0.0259 (4)0.063 (2)
H2C0.364520.4431150.0599580.031*0.063 (2)
C1A'0.094 (3)0.4051 (17)0.0656 (10)0.0283 (4)0.063 (2)
H1E0.0598340.4174570.0282680.034*0.063 (2)
H1F0.1222490.339950.0690770.034*0.063 (2)
O1A'0.053 (3)0.4295 (15)0.1010 (10)0.0317 (3)0.063 (2)
H1CO0.0957950.3743650.1098690.038*0.063 (2)
C3A'0.232 (4)0.5658 (13)0.0699 (10)0.0309 (4)0.063 (2)
H3I0.1439990.5909390.0949990.046*0.063 (2)
H3H0.1861550.5728480.0336330.046*0.063 (2)
H3G0.3465410.597860.0735320.046*0.063 (2)
H1AN0.227 (3)0.4385 (15)0.1683 (8)0.043 (5)*
H1BN0.226 (3)0.2480 (14)0.6565 (8)0.035 (5)*
H1BO0.119 (3)0.1775 (17)0.6252 (9)0.048 (6)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C1A0.0260 (9)0.0252 (9)0.0339 (9)0.0010 (7)0.0024 (7)0.0015 (7)
C1B0.0290 (8)0.0291 (8)0.0298 (8)0.0023 (6)0.0020 (6)0.0009 (6)
C2A0.0263 (8)0.0190 (7)0.0323 (8)0.0007 (6)0.0004 (6)0.0002 (6)
C3A0.0321 (9)0.0287 (8)0.0320 (8)0.0027 (6)0.0005 (6)0.0047 (6)
C2B0.0268 (7)0.0245 (7)0.0304 (8)0.0011 (6)0.0011 (6)0.0023 (6)
C3B0.0332 (8)0.0398 (9)0.0310 (8)0.0044 (7)0.0003 (6)0.0064 (7)
C4A0.0258 (7)0.0297 (8)0.0340 (8)0.0070 (6)0.0002 (6)0.0031 (6)
C4B0.0255 (7)0.0263 (7)0.0305 (8)0.0044 (6)0.0001 (6)0.0013 (6)
C5A0.0222 (7)0.0337 (8)0.0334 (8)0.0023 (6)0.0009 (6)0.0054 (6)
C5B0.0208 (7)0.0301 (8)0.0304 (8)0.0001 (6)0.0010 (6)0.0037 (6)
C6A0.0230 (7)0.0201 (7)0.0315 (8)0.0023 (5)0.0032 (6)0.0024 (5)
C6B0.0231 (7)0.0205 (7)0.0286 (7)0.0034 (5)0.0029 (5)0.0015 (5)
C7A0.0219 (7)0.0196 (6)0.0341 (8)0.0021 (5)0.0016 (6)0.0003 (5)
C7B0.0223 (7)0.0198 (6)0.0314 (8)0.0026 (5)0.0012 (5)0.0001 (5)
C8A0.0266 (7)0.0212 (7)0.0338 (8)0.0029 (6)0.0004 (6)0.0001 (6)
C8B0.0288 (7)0.0224 (7)0.0321 (8)0.0038 (6)0.0003 (6)0.0002 (6)
C9A0.0315 (8)0.0247 (7)0.0308 (8)0.0020 (6)0.0062 (6)0.0015 (6)
C9B0.0343 (8)0.0269 (7)0.0288 (8)0.0015 (6)0.0062 (6)0.0030 (6)
C10A0.0256 (7)0.0234 (7)0.0422 (9)0.0018 (6)0.0074 (6)0.0008 (6)
C10B0.0271 (8)0.0227 (7)0.0384 (8)0.0011 (6)0.0078 (6)0.0013 (6)
C11A0.0243 (7)0.0231 (7)0.0385 (8)0.0019 (6)0.0021 (6)0.0046 (6)
C11B0.0239 (7)0.0221 (7)0.0353 (8)0.0019 (5)0.0016 (6)0.0029 (6)
C12A0.0233 (7)0.0346 (8)0.0362 (8)0.0025 (6)0.0015 (6)0.0009 (6)
C12B0.0241 (7)0.0358 (8)0.0334 (8)0.0020 (6)0.0001 (6)0.0004 (6)
C13A0.0343 (9)0.0429 (10)0.0341 (8)0.0027 (7)0.0018 (7)0.0002 (7)
C13B0.0353 (9)0.0432 (10)0.0321 (8)0.0028 (7)0.0023 (7)0.0008 (7)
N1A0.0233 (6)0.0232 (6)0.0281 (6)0.0039 (5)0.0002 (5)0.0001 (5)
N1B0.0218 (6)0.0222 (6)0.0259 (6)0.0016 (5)0.0007 (5)0.0002 (5)
O1A0.0257 (6)0.0242 (6)0.0452 (8)0.0028 (5)0.0053 (6)0.0016 (6)
O1B0.0261 (5)0.0266 (6)0.0416 (6)0.0024 (4)0.0043 (4)0.0009 (5)
O2A0.0225 (5)0.0371 (6)0.0295 (6)0.0006 (4)0.0012 (4)0.0036 (4)
O2B0.0219 (5)0.0358 (6)0.0267 (5)0.0031 (4)0.0011 (4)0.0025 (4)
C2A'0.0263 (8)0.0190 (7)0.0323 (8)0.0007 (6)0.0004 (6)0.0002 (6)
C1A'0.0260 (9)0.0252 (9)0.0339 (9)0.0010 (7)0.0024 (7)0.0015 (7)
O1A'0.0257 (6)0.0242 (6)0.0452 (8)0.0028 (5)0.0053 (6)0.0016 (6)
C3A'0.0321 (9)0.0287 (8)0.0320 (8)0.0027 (6)0.0005 (6)0.0047 (6)
Geometric parameters (Å, º) top
C1A—O1A1.415 (2)C7B—C12B1.510 (2)
C1A—C2A1.516 (2)C8A—C9A1.400 (2)
C1A—H1A0.97C8A—C13A1.506 (2)
C1A—H1B0.97C8B—C9B1.399 (2)
C1B—O1B1.4098 (19)C8B—C13B1.508 (2)
C1B—C2B1.517 (2)C9A—C10A1.383 (2)
C1B—H1C0.97C9A—H9A0.93
C1B—H1D0.97C9B—C10B1.383 (2)
C2A—N1A1.4746 (19)C9B—H9B0.93
C2A—C3A1.520 (2)C10A—C11A1.382 (2)
C2A—H2A0.98C10A—H10A0.93
C3A—H3A0.96C10B—C11B1.385 (2)
C3A—H3B0.96C10B—H10B0.93
C3A—H3C0.96C11A—H11A0.93
C2B—N1B1.4731 (19)C11B—H11B0.93
C2B—C3B1.517 (2)C12A—H12A0.96
C2B—H2B0.98C12A—H12B0.96
C3B—H3E0.96C12A—H12C0.96
C3B—H3F0.96C12B—H12F0.96
C3B—H3D0.96C12B—H12E0.96
C4A—N1A1.4736 (18)C12B—H12D0.96
C4A—C5A1.504 (2)C13A—H13A0.96
C4A—H4A0.97C13A—H13B0.96
C4A—H4B0.97C13A—H13C0.96
C4B—N1B1.4701 (18)C13B—H13F0.96
C4B—C5B1.503 (2)C13B—H13E0.96
C4B—H4C0.97C13B—H13D0.96
C4B—H4D0.97N1A—C2A'1.504 (10)
C5A—O2A1.4328 (18)N1A—H1AN0.92 (2)
C5A—H5A0.97N1B—H1BN0.91 (2)
C5A—H5B0.97O1A—H1AO0.878 (10)
C5B—O2B1.4332 (17)O1B—H1BO0.90 (2)
C5B—H5C0.97C2A'—C3A'1.522 (10)
C5B—H5D0.97C2A'—C1A'1.534 (10)
C6A—O2A1.3701 (18)C2A'—H2C0.98
C6A—C11A1.400 (2)C1A'—O1A'1.424 (10)
C6A—C7A1.405 (2)C1A'—H1E0.97
C6B—O2B1.3686 (18)C1A'—H1F0.97
C6B—C11B1.397 (2)O1A'—H1CO0.8847
C6B—C7B1.402 (2)C3A'—H3I0.96
C7A—C8A1.392 (2)C3A'—H3H0.96
C7A—C12A1.510 (2)C3A'—H3G0.96
C7B—C8B1.393 (2)
O1A—C1A—C2A110.60 (14)C7B—C8B—C13B120.47 (14)
O1A—C1A—H1A109.5C9B—C8B—C13B119.71 (14)
C2A—C1A—H1A109.5C10A—C9A—C8A120.52 (14)
O1A—C1A—H1B109.5C10A—C9A—H9A119.7
C2A—C1A—H1B109.5C8A—C9A—H9A119.7
H1A—C1A—H1B108.1C10B—C9B—C8B120.71 (14)
O1B—C1B—C2B110.77 (12)C10B—C9B—H9B119.6
O1B—C1B—H1C109.5C8B—C9B—H9B119.6
C2B—C1B—H1C109.5C11A—C10A—C9A120.64 (14)
O1B—C1B—H1D109.5C11A—C10A—H10A119.7
C2B—C1B—H1D109.5C9A—C10A—H10A119.7
H1C—C1B—H1D108.1C9B—C10B—C11B120.34 (14)
N1A—C2A—C1A107.80 (12)C9B—C10B—H10B119.8
N1A—C2A—C3A111.18 (13)C11B—C10B—H10B119.8
C1A—C2A—C3A110.25 (14)C10A—C11A—C6A119.11 (14)
N1A—C2A—H2A109.2C10A—C11A—H11A120.4
C1A—C2A—H2A109.2C6A—C11A—H11A120.4
C3A—C2A—H2A109.2C10B—C11B—C6B119.15 (14)
C2A—C3A—H3A109.5C10B—C11B—H11B120.4
C2A—C3A—H3B109.5C6B—C11B—H11B120.4
H3A—C3A—H3B109.5C7A—C12A—H12A109.5
C2A—C3A—H3C109.5C7A—C12A—H12B109.5
H3A—C3A—H3C109.5H12A—C12A—H12B109.5
H3B—C3A—H3C109.5C7A—C12A—H12C109.5
N1B—C2B—C3B111.72 (13)H12A—C12A—H12C109.5
N1B—C2B—C1B107.65 (12)H12B—C12A—H12C109.5
C3B—C2B—C1B110.55 (13)C7B—C12B—H12F109.5
N1B—C2B—H2B109C7B—C12B—H12E109.5
C3B—C2B—H2B109H12F—C12B—H12E109.5
C1B—C2B—H2B109C7B—C12B—H12D109.5
C2B—C3B—H3E109.5H12F—C12B—H12D109.5
C2B—C3B—H3F109.5H12E—C12B—H12D109.5
H3E—C3B—H3F109.5C8A—C13A—H13A109.5
C2B—C3B—H3D109.5C8A—C13A—H13B109.5
H3E—C3B—H3D109.5H13A—C13A—H13B109.5
H3F—C3B—H3D109.5C8A—C13A—H13C109.5
N1A—C4A—C5A111.57 (12)H13A—C13A—H13C109.5
N1A—C4A—H4A109.3H13B—C13A—H13C109.5
C5A—C4A—H4A109.3C8B—C13B—H13F109.5
N1A—C4A—H4B109.3C8B—C13B—H13E109.5
C5A—C4A—H4B109.3H13F—C13B—H13E109.5
H4A—C4A—H4B108C8B—C13B—H13D109.5
N1B—C4B—C5B110.93 (12)H13F—C13B—H13D109.5
N1B—C4B—H4C109.5H13E—C13B—H13D109.5
C5B—C4B—H4C109.5C4A—N1A—C2A112.21 (12)
N1B—C4B—H4D109.5C4A—N1A—C2A'116.3 (7)
C5B—C4B—H4D109.5C4A—N1A—H1AN105.7 (13)
H4C—C4B—H4D108C2A—N1A—H1AN107.3 (13)
O2A—C5A—C4A107.23 (12)C2A'—N1A—H1AN126.1 (16)
O2A—C5A—H5A110.3C4B—N1B—C2B112.96 (11)
C4A—C5A—H5A110.3C4B—N1B—H1BN106.8 (13)
O2A—C5A—H5B110.3C2B—N1B—H1BN106.1 (13)
C4A—C5A—H5B110.3C1A—O1A—H1AO109.3 (14)
H5A—C5A—H5B108.5C1B—O1B—H1BO107.7 (14)
O2B—C5B—C4B106.84 (12)C6A—O2A—C5A118.02 (11)
O2B—C5B—H5C110.4C6B—O2B—C5B117.94 (11)
C4B—C5B—H5C110.4N1A—C2A'—C3A'113.1 (15)
O2B—C5B—H5D110.4N1A—C2A'—C1A'109.8 (14)
C4B—C5B—H5D110.4C3A'—C2A'—C1A'112.3 (18)
H5C—C5B—H5D108.6N1A—C2A'—H2C107.1
O2A—C6A—C11A122.86 (13)C3A'—C2A'—H2C107.1
O2A—C6A—C7A116.16 (13)C1A'—C2A'—H2C107.1
C11A—C6A—C7A120.98 (14)O1A'—C1A'—C2A'107 (2)
O2B—C6B—C11B122.97 (13)O1A'—C1A'—H1E110.3
O2B—C6B—C7B115.83 (12)C2A'—C1A'—H1E110.3
C11B—C6B—C7B121.19 (14)O1A'—C1A'—H1F110.3
C8A—C7A—C6A118.91 (13)C2A'—C1A'—H1F110.3
C8A—C7A—C12A121.02 (13)H1E—C1A'—H1F108.6
C6A—C7A—C12A120.08 (13)C1A'—O1A'—H1CO101
C8B—C7B—C6B118.80 (13)C2A'—C3A'—H3I109.5
C8B—C7B—C12B121.06 (13)C2A'—C3A'—H3H109.5
C6B—C7B—C12B120.13 (13)H3I—C3A'—H3H109.5
C7A—C8A—C9A119.82 (14)C2A'—C3A'—H3G109.5
C7A—C8A—C13A120.63 (14)H3I—C3A'—H3G109.5
C9A—C8A—C13A119.55 (14)H3H—C3A'—H3G109.5
C7B—C8B—C9B119.81 (14)
O1A—C1A—C2A—N1A62.95 (17)C8A—C9A—C10A—C11A0.6 (2)
O1A—C1A—C2A—C3A175.52 (13)C8B—C9B—C10B—C11B0.6 (2)
O1B—C1B—C2B—N1B59.04 (16)C9A—C10A—C11A—C6A0.7 (2)
O1B—C1B—C2B—C3B178.67 (12)O2A—C6A—C11A—C10A177.98 (13)
N1A—C4A—C5A—O2A64.22 (16)C7A—C6A—C11A—C10A1.6 (2)
N1B—C4B—C5B—O2B62.68 (15)C9B—C10B—C11B—C6B0.4 (2)
O2A—C6A—C7A—C8A178.31 (12)O2B—C6B—C11B—C10B177.44 (13)
C11A—C6A—C7A—C8A1.3 (2)C7B—C6B—C11B—C10B1.4 (2)
O2A—C6A—C7A—C12A1.7 (2)C5A—C4A—N1A—C2A164.20 (13)
C11A—C6A—C7A—C12A178.66 (13)C5A—C4A—N1A—C2A'167.2 (11)
O2B—C6B—C7B—C8B177.60 (12)C1A—C2A—N1A—C4A173.65 (13)
C11B—C6B—C7B—C8B1.3 (2)C3A—C2A—N1A—C4A65.41 (17)
O2B—C6B—C7B—C12B1.5 (2)C5B—C4B—N1B—C2B169.21 (12)
C11B—C6B—C7B—C12B179.60 (13)C3B—C2B—N1B—C4B67.95 (16)
C6A—C7A—C8A—C9A0.1 (2)C1B—C2B—N1B—C4B170.49 (12)
C12A—C7A—C8A—C9A179.91 (14)C11A—C6A—O2A—C5A12.2 (2)
C6A—C7A—C8A—C13A179.94 (14)C7A—C6A—O2A—C5A167.43 (13)
C12A—C7A—C8A—C13A0.1 (2)C4A—C5A—O2A—C6A164.14 (12)
C6B—C7B—C8B—C9B0.3 (2)C11B—C6B—O2B—C5B9.6 (2)
C12B—C7B—C8B—C9B179.38 (14)C7B—C6B—O2B—C5B169.23 (12)
C6B—C7B—C8B—C13B178.95 (14)C4B—C5B—O2B—C6B170.18 (12)
C12B—C7B—C8B—C13B0.2 (2)C4A—N1A—C2A'—C3A'52 (2)
C7A—C8A—C9A—C10A0.9 (2)C4A—N1A—C2A'—C1A'178.7 (13)
C13A—C8A—C9A—C10A179.12 (14)N1A—C2A'—C1A'—O1A'59 (2)
C7B—C8B—C9B—C10B0.6 (2)C3A'—C2A'—C1A'—O1A'68 (2)
C13B—C8B—C9B—C10B179.87 (14)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1A—H1AO···N1Bi0.88 (1)1.90 (1)2.775 (2)173 (2)
O1A—H1CO···N1Bi0.881.982.86 (2)180
O1B—H1BO···N1Aii0.90 (2)1.89 (2)2.791 (2)174 (2)
Symmetry codes: (i) x1/2, y+1/2, z1/2; (ii) x1/2, y+1/2, z+1/2.
(R,S)-N-[2-(2,3-Dimethylphenoxy)ethyl]-1-hydroxypropan-2-aminium pyridine-2-carboxylate (1p) top
Crystal data top
C13H22NO2+·C6H4NO2Z = 2
Mr = 346.42F(000) = 372
Triclinic, P1Dx = 1.264 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54184 Å
a = 6.5225 (1) ÅCell parameters from 12551 reflections
b = 12.7734 (2) Åθ = 4.0–76.5°
c = 12.8431 (2) ŵ = 0.72 mm1
α = 118.954 (1)°T = 100 K
β = 91.292 (1)°Prism, clear colourless
γ = 101.139 (1)°0.41 × 0.08 × 0.04 mm
V = 910.20 (3) Å3
Data collection top
Rigaku XtaLAB Synergy Dualflex
diffractometer with a HyPix detector
3673 independent reflections
Radiation source: micro-focus sealed X-ray tube, PhotonJet (Cu) X-ray Source3310 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.043
ω scansθmax = 76.2°, θmin = 4.0°
Absorption correction: gaussian
(CrysAlis PRO; Rigaku OD, 2018)
h = 78
Tmin = 0.553, Tmax = 1k = 1615
23149 measured reflectionsl = 1616
Refinement top
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.035 w = 1/[σ2(Fo2) + (0.045P)2 + 0.2207P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.094(Δ/σ)max = 0.003
S = 1.05Δρmax = 0.22 e Å3
3673 reflectionsΔρmin = 0.18 e Å3
275 parametersExtinction correction: SHELXL2018 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
11 restraintsExtinction coefficient: 0.0035 (5)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
C1A0.5082 (7)0.4534 (6)0.1194 (7)0.0322 (15)0.603 (3)
H1A0.5235540.4090790.0329920.039*0.603 (3)
H1C0.4444240.3913280.1415770.039*0.603 (3)
C3A0.8233 (12)0.6299 (5)0.1739 (7)0.041 (2)0.603 (3)
H3A0.7380440.6913480.2060.062*0.603 (3)
H3C0.8252830.600420.0879360.062*0.603 (3)
H3E0.9677050.667350.2159760.062*0.603 (3)
O1A0.3675 (3)0.53307 (18)0.13754 (15)0.0470 (5)0.603 (3)
C1B0.8094 (17)0.6338 (7)0.1823 (10)0.037 (3)0.397 (3)
H1B0.9495040.6776050.2313350.045*0.397 (3)
H1D0.8269090.6087230.0976710.045*0.397 (3)
C3B0.5195 (15)0.4421 (12)0.1180 (13)0.046 (3)0.397 (3)
H3B0.4076320.4854560.1506070.069*0.397 (3)
H3D0.490480.3649850.1201540.069*0.397 (3)
H3F0.5245970.4239290.0348630.069*0.397 (3)
O1B0.6716 (4)0.7142 (2)0.2214 (2)0.0374 (7)0.397 (3)
C20.72780 (18)0.52154 (10)0.19228 (10)0.0282 (3)
H20.8218920.4625560.1637930.034*
C40.67093 (19)0.47360 (11)0.36251 (10)0.0301 (3)
H4A0.5383710.4134320.3142750.036*
H4B0.6466320.5148760.4476210.036*
C50.84137 (19)0.40507 (10)0.34979 (9)0.0276 (2)
H5A0.9814230.4632820.3792380.033*
H5B0.8206480.3633710.3979740.033*
C60.99162 (17)0.25555 (10)0.19395 (10)0.0239 (2)
C71.01307 (17)0.19803 (10)0.07140 (10)0.0232 (2)
C81.17644 (18)0.13710 (10)0.03294 (10)0.0254 (2)
C91.31082 (18)0.13268 (11)0.11611 (11)0.0293 (3)
H91.4228810.092230.0901520.035*
C101.28249 (19)0.18663 (11)0.23597 (11)0.0301 (3)
H101.3730470.1810610.2911630.036*
C111.12319 (18)0.24874 (10)0.27633 (10)0.0274 (2)
H111.1041070.2859880.3587030.033*
C120.86223 (19)0.20306 (11)0.01589 (10)0.0283 (3)
H12A0.8270020.1233910.0903460.042*
H12B0.9283620.2673680.0335710.042*
H12C0.7333030.2217020.019510.042*
C131.2099 (2)0.07789 (11)0.09733 (11)0.0308 (3)
H13A1.3344840.0433160.1074770.046*
H13B1.2310590.1397940.1227280.046*
H13C1.0857760.0120670.146440.046*
C140.26384 (18)0.71435 (10)0.44225 (9)0.0244 (2)
C150.44130 (17)0.82847 (10)0.51361 (9)0.0231 (2)
C160.40433 (17)0.93583 (10)0.60737 (9)0.0249 (2)
H160.2662810.9395520.6286160.03*
C170.57110 (18)1.03717 (10)0.66934 (10)0.0273 (2)
H170.5495181.111740.7334250.033*
C180.77024 (19)1.02785 (11)0.63618 (10)0.0285 (2)
H180.8880781.0958140.6769640.034*
C190.79363 (18)0.91738 (11)0.54238 (11)0.0305 (3)
H190.9306840.911150.5203620.037*
N10.71983 (16)0.56730 (9)0.32404 (8)0.0269 (2)
N20.63362 (15)0.81869 (9)0.48087 (8)0.0285 (2)
O20.83080 (12)0.31628 (7)0.22573 (7)0.02673 (19)
O30.31104 (14)0.61537 (7)0.37268 (8)0.0350 (2)
O40.08058 (12)0.72907 (7)0.46149 (7)0.0308 (2)
H1AO0.333 (5)0.556 (3)0.210 (2)0.073 (10)*0.603 (3)
H1BO0.665 (7)0.747 (4)0.2980 (19)0.057 (13)*0.397 (3)
H1AN0.853 (3)0.6217 (15)0.3670 (14)0.044 (4)*
H1BN0.623 (3)0.6151 (15)0.3513 (14)0.045 (4)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C1A0.028 (2)0.029 (2)0.022 (2)0.0081 (19)0.0024 (18)0.0058 (17)
C3A0.042 (3)0.032 (3)0.060 (4)0.000 (2)0.002 (3)0.033 (3)
O1A0.0393 (9)0.0693 (12)0.0337 (9)0.0225 (8)0.0050 (7)0.0232 (8)
C1B0.037 (5)0.041 (5)0.020 (3)0.006 (3)0.005 (3)0.005 (3)
C3B0.057 (6)0.046 (4)0.038 (5)0.022 (4)0.008 (4)0.019 (4)
O1B0.0588 (16)0.0293 (12)0.0316 (13)0.0185 (11)0.0117 (11)0.0178 (10)
C20.0296 (6)0.0253 (6)0.0266 (6)0.0065 (5)0.0063 (5)0.0104 (5)
C40.0293 (6)0.0312 (6)0.0249 (5)0.0051 (5)0.0095 (5)0.0106 (5)
C50.0349 (6)0.0259 (5)0.0194 (5)0.0055 (5)0.0048 (4)0.0097 (4)
C60.0236 (5)0.0209 (5)0.0249 (5)0.0023 (4)0.0022 (4)0.0106 (4)
C70.0233 (5)0.0205 (5)0.0243 (5)0.0016 (4)0.0019 (4)0.0113 (4)
C80.0249 (6)0.0212 (5)0.0285 (6)0.0020 (4)0.0044 (4)0.0124 (4)
C90.0248 (6)0.0260 (6)0.0374 (6)0.0055 (4)0.0033 (5)0.0162 (5)
C100.0289 (6)0.0289 (6)0.0330 (6)0.0029 (5)0.0045 (5)0.0175 (5)
C110.0302 (6)0.0248 (5)0.0234 (5)0.0018 (5)0.0011 (4)0.0110 (4)
C120.0318 (6)0.0300 (6)0.0225 (5)0.0087 (5)0.0031 (4)0.0123 (5)
C130.0322 (6)0.0295 (6)0.0315 (6)0.0086 (5)0.0101 (5)0.0150 (5)
C140.0273 (6)0.0266 (5)0.0218 (5)0.0087 (4)0.0037 (4)0.0130 (4)
C150.0242 (5)0.0272 (5)0.0211 (5)0.0100 (4)0.0033 (4)0.0132 (4)
C160.0244 (5)0.0300 (6)0.0224 (5)0.0101 (4)0.0045 (4)0.0133 (5)
C170.0317 (6)0.0267 (6)0.0226 (5)0.0105 (5)0.0039 (4)0.0101 (4)
C180.0276 (6)0.0282 (6)0.0284 (6)0.0039 (5)0.0008 (4)0.0141 (5)
C190.0231 (6)0.0352 (6)0.0327 (6)0.0093 (5)0.0052 (5)0.0155 (5)
N10.0239 (5)0.0239 (5)0.0261 (5)0.0080 (4)0.0029 (4)0.0064 (4)
N20.0255 (5)0.0304 (5)0.0276 (5)0.0110 (4)0.0049 (4)0.0113 (4)
O20.0265 (4)0.0274 (4)0.0210 (4)0.0075 (3)0.0018 (3)0.0076 (3)
O30.0337 (5)0.0251 (4)0.0385 (5)0.0083 (4)0.0098 (4)0.0092 (4)
O40.0233 (4)0.0292 (4)0.0345 (4)0.0071 (3)0.0007 (3)0.0114 (4)
Geometric parameters (Å, º) top
C1A—O1A1.440 (7)C7—C81.3990 (15)
C1A—C21.535 (4)C7—C121.5078 (15)
C1A—H1A0.99C8—C91.3955 (17)
C1A—H1C0.99C8—C131.5079 (15)
C3A—C21.533 (4)C9—C101.3834 (17)
C3A—H3A0.98C9—H90.95
C3A—H3C0.98C10—C111.3864 (17)
C3A—H3E0.98C10—H100.95
O1A—H1AO0.877 (18)C11—H110.95
C1B—O1B1.411 (8)C12—H12A0.98
C1B—C21.498 (7)C12—H12B0.98
C1B—H1B0.99C12—H12C0.98
C1B—H1D0.99C13—H13A0.98
C3B—C21.502 (8)C13—H13B0.98
C3B—H3B0.98C13—H13C0.98
C3B—H3D0.98C14—O31.2492 (13)
C3B—H3F0.98C14—O41.2571 (13)
O1B—H1BO0.868 (19)C14—C151.5203 (16)
C2—N11.5052 (14)C15—N21.3414 (14)
C2—H21C15—C161.3896 (15)
C4—N11.4867 (15)C16—C171.3826 (17)
C4—C51.5082 (16)C16—H160.95
C4—H4A0.99C17—C181.3850 (16)
C4—H4B0.99C17—H170.95
C5—O21.4300 (13)C18—C191.3825 (17)
C5—H5A0.99C18—H180.95
C5—H5B0.99C19—N21.3389 (16)
C6—O21.3769 (13)C19—H190.95
C6—C111.3931 (16)N1—H1AN0.958 (18)
C6—C71.4023 (15)N1—H1BN0.919 (17)
O1A—C1A—C2113.6 (4)C6—C7—C12119.99 (10)
O1A—C1A—H1A108.8C9—C8—C7119.68 (10)
C2—C1A—H1A108.8C9—C8—C13119.92 (10)
O1A—C1A—H1C108.8C7—C8—C13120.39 (10)
C2—C1A—H1C108.8C10—C9—C8120.66 (11)
H1A—C1A—H1C107.7C10—C9—H9119.7
C2—C3A—H3A109.5C8—C9—H9119.7
C2—C3A—H3C109.5C9—C10—C11120.63 (10)
H3A—C3A—H3C109.5C9—C10—H10119.7
C2—C3A—H3E109.5C11—C10—H10119.7
H3A—C3A—H3E109.5C10—C11—C6118.82 (10)
H3C—C3A—H3E109.5C10—C11—H11120.6
C1A—O1A—H1AO106 (2)C6—C11—H11120.6
O1B—C1B—C2111.7 (6)C7—C12—H12A109.5
O1B—C1B—H1B109.3C7—C12—H12B109.5
C2—C1B—H1B109.3H12A—C12—H12B109.5
O1B—C1B—H1D109.3C7—C12—H12C109.5
C2—C1B—H1D109.3H12A—C12—H12C109.5
H1B—C1B—H1D108H12B—C12—H12C109.5
C2—C3B—H3B109.5C8—C13—H13A109.5
C2—C3B—H3D109.5C8—C13—H13B109.5
H3B—C3B—H3D109.5H13A—C13—H13B109.5
C2—C3B—H3F109.5C8—C13—H13C109.5
H3B—C3B—H3F109.5H13A—C13—H13C109.5
H3D—C3B—H3F109.5H13B—C13—H13C109.5
C1B—O1B—H1BO113 (3)O3—C14—O4125.99 (11)
C3B—C2—N1111.8 (6)O3—C14—C15118.32 (10)
C3B—C2—C1B115.5 (7)O4—C14—C15115.67 (9)
N1—C2—C1B105.7 (4)N2—C15—C16122.54 (10)
N1—C2—C3A109.5 (3)N2—C15—C14116.07 (9)
N1—C2—C1A111.2 (3)C16—C15—C14121.38 (10)
C3A—C2—C1A111.3 (4)C17—C16—C15119.13 (10)
N1—C2—H2108.3C17—C16—H16120.4
C3A—C2—H2108.3C15—C16—H16120.4
C1A—C2—H2108.3C16—C17—C18118.71 (10)
N1—C4—C5114.13 (9)C16—C17—H17120.6
N1—C4—H4A108.7C18—C17—H17120.6
C5—C4—H4A108.7C19—C18—C17118.48 (11)
N1—C4—H4B108.7C19—C18—H18120.8
C5—C4—H4B108.7C17—C18—H18120.8
H4A—C4—H4B107.6N2—C19—C18123.57 (11)
O2—C5—C4108.47 (9)N2—C19—H19118.2
O2—C5—H5A110C18—C19—H19118.2
C4—C5—H5A110C4—N1—C2117.41 (9)
O2—C5—H5B110C4—N1—H1AN108.2 (9)
C4—C5—H5B110C2—N1—H1AN108.0 (9)
H5A—C5—H5B108.4C4—N1—H1BN107.0 (10)
O2—C6—C11123.01 (10)C2—N1—H1BN110.5 (10)
O2—C6—C7115.50 (9)H1AN—N1—H1BN105.1 (13)
C11—C6—C7121.47 (10)C19—N2—C15117.57 (10)
C8—C7—C6118.68 (10)C6—O2—C5116.94 (8)
C8—C7—C12121.33 (10)
O1B—C1B—C2—C3B61.6 (11)O4—C14—C15—N2170.18 (9)
O1B—C1B—C2—N162.7 (8)O3—C14—C15—C16168.55 (10)
O1A—C1A—C2—N171.1 (6)O4—C14—C15—C1610.09 (15)
O1A—C1A—C2—C3A51.3 (7)N2—C15—C16—C170.39 (17)
N1—C4—C5—O276.44 (12)C14—C15—C16—C17179.90 (9)
O2—C6—C7—C8178.45 (9)C15—C16—C17—C180.42 (16)
C11—C6—C7—C82.70 (16)C16—C17—C18—C190.01 (17)
O2—C6—C7—C121.31 (15)C17—C18—C19—N20.53 (18)
C11—C6—C7—C12177.54 (10)C5—C4—N1—C268.07 (13)
C6—C7—C8—C91.29 (16)C3B—C2—N1—C461.4 (6)
C12—C7—C8—C9178.95 (10)C1B—C2—N1—C4172.1 (4)
C6—C7—C8—C13177.84 (10)C3A—C2—N1—C4168.5 (3)
C12—C7—C8—C131.92 (16)C1A—C2—N1—C468.1 (3)
C7—C8—C9—C100.82 (17)C18—C19—N2—C150.56 (17)
C13—C8—C9—C10179.94 (10)C16—C15—N2—C190.09 (16)
C8—C9—C10—C111.59 (17)C14—C15—N2—C19179.63 (10)
C9—C10—C11—C60.20 (17)C11—C6—O2—C519.38 (15)
O2—C6—C11—C10179.28 (10)C7—C6—O2—C5161.79 (9)
C7—C6—C11—C101.96 (16)C4—C5—O2—C6171.72 (9)
O3—C14—C15—N211.18 (15)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1AN···O4i0.96 (2)1.75 (2)2.707 (1)173 (1)
N1—H1BN···N20.920 (2)2.30 (2)3.028 (1)136 (1)
N1—H1BN···O30.920 (2)2.06 (2)2.866 (1)146 (1)
O1A—H1AO···O30.88 (2)1.87 (2)2.736 (2)170 (3)
O1B—H1BO···N20.87 (2)2.10 (2)2.967 (2)177 (4)
C2—H2···O212.373.0443 (14)124
C3A—H3C···O1Aii0.982.663.549 (9)150
C5—H5A···O3i0.992.643.564 (2)156
C19—H19···O4i0.952.483.127 (1)125
Symmetry codes: (i) x+1, y, z; (ii) x+1, y+1, z.
(S)-N-[2-(2,6-Dimethylphenoxy)ethyl]-1-hydroxypropan-2-aminium chloride (2c) top
Crystal data top
C13H22NO2+·ClF(000) = 280
Mr = 259.76Dx = 1.269 Mg m3
Monoclinic, P21Cu Kα radiation, λ = 1.54184 Å
Hall symbol: P 2ybCell parameters from 13959 reflections
a = 7.0226 (1) Åθ = 3.6–77.3°
b = 7.9585 (1) ŵ = 2.41 mm1
c = 12.5188 (1) ÅT = 100 K
β = 103.645 (1)°Irregular, clear colourless
V = 679.92 (1) Å30.24 × 0.18 × 0.12 mm
Z = 2
Data collection top
Rigaku XtaLAB Synergy Dualflex
diffractometer with a HyPix detector
2786 independent reflections
Radiation source: micro-focus sealed X-ray tube, PhotonJet (Cu) X-ray Source2771 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.031
Detector resolution: 10 pixels mm-1θmax = 77.3°, θmin = 3.6°
ω scansh = 88
Absorption correction: gaussian
(CrysAlis PRO; Rigaku OD, 2019)
k = 1010
Tmin = 0.41, Tmax = 1l = 1514
15929 measured reflections
Refinement top
Refinement on F2H atoms treated by a mixture of independent and constrained refinement
Least-squares matrix: full w = 1/[σ2(Fo2) + (0.0342P)2 + 0.1124P]
where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.022(Δ/σ)max < 0.001
wR(F2) = 0.058Δρmax = 0.27 e Å3
S = 1.07Δρmin = 0.16 e Å3
2786 reflectionsExtinction correction: SHELXL2018 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
170 parametersExtinction coefficient: 0.0150 (12)
1 restraintAbsolute structure: Flack x determined using 1247 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
Hydrogen site location: mixedAbsolute structure parameter: 0.015 (6)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.3756 (3)0.3606 (2)0.55251 (15)0.0209 (4)
H1A0.3754310.3909830.6291730.025*
H1B0.3297350.2430.5398510.025*
C20.2374 (3)0.4769 (2)0.47322 (14)0.0163 (4)
H130.2680720.5960590.4962920.02*
C30.0229 (3)0.4423 (3)0.46877 (16)0.0229 (4)
H3A0.0593210.5180210.4154430.034*
H3B0.0022880.4610330.5415760.034*
H3C0.0080170.3255310.4464180.034*
C40.2040 (2)0.5770 (3)0.27671 (12)0.0146 (3)
H4A0.2217960.6912280.3088020.017*
H4B0.062260.5581540.2460110.017*
C50.3142 (2)0.5605 (2)0.18722 (13)0.0158 (3)
H5A0.291650.4481790.1525170.019*
H5B0.2695340.6468780.1298930.019*
C60.6373 (2)0.5403 (2)0.16658 (14)0.0140 (4)
C70.7014 (2)0.3737 (2)0.16595 (14)0.0147 (3)
C80.8127 (2)0.3313 (2)0.09093 (14)0.0162 (3)
H80.860190.2198170.0893740.019*
C90.8547 (3)0.4505 (2)0.01851 (14)0.0164 (3)
H90.9249470.4188890.0345440.02*
C100.7938 (2)0.6157 (2)0.02381 (14)0.0158 (4)
H100.8248550.6966560.0252230.019*
C110.6879 (2)0.6648 (2)0.09997 (15)0.0149 (3)
C120.6528 (3)0.2446 (2)0.24365 (15)0.0178 (4)
H12A0.6518970.2981710.3140010.027*
H12B0.7516490.1552230.2556040.027*
H12C0.5234670.1963880.211840.027*
C130.6403 (3)0.8472 (2)0.11285 (15)0.0185 (4)
H13A0.5298110.8556270.1479790.028*
H13B0.605210.9007090.0403530.028*
H13C0.7547550.9038030.158590.028*
Cl10.17264 (5)0.08253 (5)0.28280 (3)0.01826 (12)
N10.2823 (2)0.44921 (19)0.36289 (12)0.0145 (3)
O10.56934 (19)0.37453 (18)0.53653 (11)0.0225 (3)
O20.51912 (15)0.58314 (18)0.23836 (8)0.0141 (2)
H1O0.637 (4)0.437 (4)0.583 (3)0.045 (8)*
H1AN0.248 (3)0.341 (4)0.3404 (19)0.024 (6)*
H2BN0.409 (4)0.451 (3)0.372 (2)0.028 (6)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0242 (9)0.0219 (9)0.0162 (8)0.0004 (7)0.0043 (7)0.0022 (7)
C20.0200 (9)0.0175 (8)0.0130 (8)0.0004 (7)0.0068 (6)0.0012 (7)
C30.0206 (9)0.0289 (10)0.0220 (9)0.0010 (8)0.0107 (7)0.0015 (8)
C40.0139 (7)0.0156 (7)0.0144 (7)0.0013 (8)0.0039 (5)0.0014 (8)
C50.0129 (7)0.0198 (9)0.0143 (7)0.0002 (7)0.0022 (6)0.0005 (7)
C60.0120 (7)0.0174 (9)0.0126 (8)0.0004 (6)0.0028 (6)0.0017 (6)
C70.0137 (7)0.0151 (8)0.0147 (8)0.0019 (6)0.0025 (6)0.0002 (7)
C80.0149 (7)0.0144 (8)0.0193 (8)0.0008 (6)0.0041 (6)0.0022 (7)
C90.0142 (8)0.0209 (9)0.0149 (8)0.0009 (6)0.0049 (6)0.0025 (7)
C100.0152 (8)0.0174 (10)0.0150 (8)0.0028 (6)0.0041 (6)0.0025 (6)
C110.0130 (7)0.0161 (8)0.0145 (8)0.0010 (7)0.0011 (6)0.0003 (7)
C120.0176 (8)0.0156 (8)0.0215 (9)0.0003 (6)0.0073 (6)0.0024 (7)
C130.0213 (8)0.0142 (8)0.0204 (8)0.0003 (7)0.0059 (7)0.0016 (7)
Cl10.01893 (19)0.01711 (19)0.0189 (2)0.00029 (16)0.00483 (13)0.00074 (17)
N10.0149 (7)0.0151 (7)0.0145 (7)0.0010 (6)0.0057 (5)0.0004 (6)
O10.0200 (6)0.0256 (7)0.0200 (6)0.0021 (5)0.0006 (5)0.0030 (5)
O20.0123 (5)0.0173 (5)0.0131 (5)0.0000 (5)0.0040 (4)0.0022 (6)
Geometric parameters (Å, º) top
C1—O11.426 (2)C6—O21.401 (2)
C1—C21.526 (2)C7—C81.398 (2)
C1—H1A0.99C7—C121.508 (2)
C1—H1B0.99C8—C91.391 (3)
C2—N11.504 (2)C8—H80.95
C2—C31.519 (2)C9—C101.389 (3)
C2—H131C9—H90.95
C3—H3A0.98C10—C111.397 (3)
C3—H3B0.98C10—H100.95
C3—H3C0.98C11—C131.506 (2)
C4—N11.490 (2)C12—H12A0.98
C4—C51.510 (2)C12—H12B0.98
C4—H4A0.99C12—H12C0.98
C4—H4B0.99C13—H13A0.98
C5—O21.4419 (18)C13—H13B0.98
C5—H5A0.99C13—H13C0.98
C5—H5B0.99N1—H1AN0.92 (3)
C6—C111.394 (2)N1—H2BN0.87 (3)
C6—C71.401 (2)O1—H1O0.83 (3)
O1—C1—C2110.06 (15)C8—C7—C12121.08 (16)
O1—C1—H1A109.6C6—C7—C12121.30 (15)
C2—C1—H1A109.6C9—C8—C7120.78 (17)
O1—C1—H1B109.6C9—C8—H8119.6
C2—C1—H1B109.6C7—C8—H8119.6
H1A—C1—H1B108.2C10—C9—C8119.96 (16)
N1—C2—C3111.14 (14)C10—C9—H9120
N1—C2—C1105.64 (14)C8—C9—H9120
C3—C2—C1112.75 (16)C9—C10—C11121.14 (16)
N1—C2—H13109.1C9—C10—H10119.4
C3—C2—H13109.1C11—C10—H10119.4
C1—C2—H13109.1C6—C11—C10117.47 (15)
C2—C3—H3A109.5C6—C11—C13121.77 (16)
C2—C3—H3B109.5C10—C11—C13120.69 (16)
H3A—C3—H3B109.5C7—C12—H12A109.5
C2—C3—H3C109.5C7—C12—H12B109.5
H3A—C3—H3C109.5H12A—C12—H12B109.5
H3B—C3—H3C109.5C7—C12—H12C109.5
N1—C4—C5108.16 (14)H12A—C12—H12C109.5
N1—C4—H4A110.1H12B—C12—H12C109.5
C5—C4—H4A110.1C11—C13—H13A109.5
N1—C4—H4B110.1C11—C13—H13B109.5
C5—C4—H4B110.1H13A—C13—H13B109.5
H4A—C4—H4B108.4C11—C13—H13C109.5
O2—C5—C4107.00 (12)H13A—C13—H13C109.5
O2—C5—H5A110.3H13B—C13—H13C109.5
C4—C5—H5A110.3C4—N1—C2116.34 (14)
O2—C5—H5B110.3C4—N1—H1AN113.0 (15)
C4—C5—H5B110.3C2—N1—H1AN108.8 (15)
H5A—C5—H5B108.6C4—N1—H2BN105.5 (17)
C11—C6—C7122.81 (16)C2—N1—H2BN108.2 (16)
C11—C6—O2118.92 (15)H1AN—N1—H2BN104 (2)
C7—C6—O2118.26 (15)C1—O1—H1O111 (2)
C8—C7—C6117.62 (16)C6—O2—C5111.39 (12)
O1—C1—C2—N146.40 (19)O2—C6—C11—C10175.51 (14)
O1—C1—C2—C3167.97 (15)C7—C6—C11—C13171.59 (17)
N1—C4—C5—O257.64 (19)O2—C6—C11—C137.6 (2)
C11—C6—C7—C83.2 (2)C9—C10—C11—C63.1 (2)
O2—C6—C7—C8177.55 (14)C9—C10—C11—C13173.78 (15)
C11—C6—C7—C12176.58 (15)C5—C4—N1—C2162.26 (15)
O2—C6—C7—C122.7 (2)C3—C2—N1—C472.16 (19)
C6—C7—C8—C91.1 (2)C1—C2—N1—C4165.24 (14)
C12—C7—C8—C9179.14 (16)C11—C6—O2—C591.09 (18)
C7—C8—C9—C103.1 (3)C7—C6—O2—C589.64 (18)
C8—C9—C10—C110.9 (3)C4—C5—O2—C6169.26 (15)
C7—C6—C11—C105.3 (2)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1AN···Cl10.92 (3)2.21 (3)3.122 (2)178 (2)
N1—H2BN···O20.87 (3)2.25 (3)2.749 (2)116 (2)
N1—H2BN···O10.87 (3)2.19 (2)2.660 (2)113 (2)
O1—H1O···Cl1i0.83 (3)2.21 (3)3.034 (2)174 (3)
C2—H13···O1i12.573.457 (2)148
C3—H3B···Cl1ii0.982.913.850 (2)162
C4—H4A···O1i0.992.593.443 (2)145
Symmetry codes: (i) x+1, y+1/2, z+1; (ii) x, y+1/2, z+1.
(R,S)-N-[2-(2,6-Dimethylphenoxy)ethyl]-1-hydroxypropan-2-aminium pyridine-2-carboxylate (2p) top
Crystal data top
C13H22NO2+·C6H4NO2Dx = 1.199 Mg m3
Mr = 346.42Cu Kα radiation, λ = 1.54184 Å
Tetragonal, P41212Cell parameters from 7917 reflections
Hall symbol: P 4abw 2nwθ = 4.3–70.4°
a = 10.9828 (1) ŵ = 0.69 mm1
c = 31.8240 (4) ÅT = 130 K
V = 3838.67 (8) Å3Irregular, colourless
Z = 80.62 × 0.42 × 0.37 mm
F(000) = 1488
Data collection top
Rigaku OD SuperNova Dual source
diffractometer with an Atlas detector
3670 independent reflections
Radiation source: micro-focus sealed X-ray tube, SuperNova (Cu) X-ray Source3428 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.032
Detector resolution: 10.3756 pixels mm-1θmax = 70.6°, θmin = 4.3°
ω scansh = 1310
Absorption correction: gaussian
(CrysAlis PRO; Rigaku OD, 2015)
k = 713
Tmin = 0.383, Tmax = 1l = 3838
15589 measured reflections
Refinement top
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.031 w = 1/[σ2(Fo2) + (0.0474P)2 + 0.2711P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.081(Δ/σ)max < 0.001
S = 1.06Δρmax = 0.14 e Å3
3670 reflectionsΔρmin = 0.16 e Å3
241 parametersAbsolute structure: Flack x determined using 1323 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
0 restraintsAbsolute structure parameter: 0.06 (9)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.77163 (18)0.30120 (18)0.15168 (5)0.0355 (4)
H1A0.8169340.3197150.17780.043*
H1B0.8184270.2389860.1359910.043*
C20.64789 (17)0.24857 (16)0.16325 (5)0.0300 (4)
H20.6045330.2240270.1369510.036*
C30.6622 (2)0.13774 (19)0.19127 (6)0.0457 (5)
H3A0.7037090.1612610.2172920.069*
H3B0.7103760.0757950.1766280.069*
H3C0.5816610.1045830.1980020.069*
C40.49464 (17)0.41897 (17)0.15865 (5)0.0321 (4)
H4A0.436320.3669630.1431410.039*
H4B0.5460080.4621220.1378720.039*
C50.42539 (18)0.51111 (17)0.18514 (5)0.0342 (4)
H5A0.3629470.4701970.202580.041*
H5B0.4815440.5563780.2038020.041*
C60.28704 (17)0.67296 (17)0.17269 (5)0.0315 (4)
C70.32882 (18)0.78580 (18)0.18622 (6)0.0360 (4)
C80.2425 (2)0.87075 (18)0.19884 (6)0.0397 (4)
H80.2681290.9489560.2080360.048*
C90.11950 (19)0.84275 (18)0.19819 (6)0.0386 (4)
H90.0614740.9024460.2062840.046*
C100.08063 (18)0.72830 (18)0.18581 (5)0.0342 (4)
H100.0037330.7092420.1861860.041*
C110.16410 (18)0.64140 (17)0.17287 (5)0.0325 (4)
C120.4623 (2)0.8174 (2)0.18646 (8)0.0534 (6)
H12A0.4719150.9058790.1885750.08*
H12B0.500110.7885080.1604090.08*
H12C0.5017570.7782850.2105690.08*
C130.1222 (2)0.5180 (2)0.15811 (8)0.0506 (5)
H13A0.140930.4569390.1796250.076*
H13B0.1642050.4968930.1319370.076*
H13C0.0341170.519770.1531720.076*
C140.40791 (16)0.24656 (15)0.28451 (5)0.0273 (4)
C150.30159 (16)0.22413 (15)0.25487 (5)0.0274 (3)
C160.18458 (17)0.20824 (17)0.27018 (5)0.0329 (4)
H160.1687110.2110170.2995130.039*
C170.09115 (18)0.18817 (18)0.24170 (6)0.0386 (4)
H170.0100060.1768380.2512640.046*
C180.11727 (19)0.18486 (18)0.19941 (6)0.0384 (4)
H180.054970.1706760.1792850.046*
C190.23646 (19)0.20270 (18)0.18700 (5)0.0371 (4)
H190.2542020.200440.1577990.045*
N10.57243 (14)0.34204 (13)0.18605 (4)0.0259 (3)
N20.32857 (14)0.22303 (14)0.21373 (4)0.0311 (3)
O10.76427 (14)0.40788 (13)0.12711 (4)0.0402 (3)
O20.37010 (13)0.59073 (13)0.15550 (4)0.0375 (3)
O30.50471 (11)0.28574 (13)0.26799 (3)0.0333 (3)
O40.39189 (12)0.22549 (14)0.32255 (4)0.0383 (3)
H1O0.766 (3)0.470 (3)0.1460 (9)0.070 (8)*
H1AN0.524 (2)0.307 (2)0.2047 (7)0.043 (6)*
H1BN0.625 (2)0.392 (2)0.2014 (7)0.047 (6)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0361 (10)0.0389 (10)0.0313 (8)0.0051 (8)0.0052 (7)0.0051 (7)
C20.0385 (9)0.0265 (9)0.0250 (7)0.0047 (7)0.0006 (7)0.0038 (6)
C30.0663 (15)0.0302 (10)0.0407 (10)0.0111 (10)0.0076 (10)0.0005 (8)
C40.0338 (9)0.0362 (10)0.0264 (7)0.0067 (8)0.0021 (7)0.0013 (7)
C50.0387 (10)0.0353 (10)0.0287 (8)0.0062 (8)0.0026 (7)0.0031 (7)
C60.0364 (10)0.0326 (9)0.0254 (7)0.0057 (8)0.0004 (7)0.0035 (6)
C70.0376 (10)0.0348 (10)0.0357 (9)0.0019 (8)0.0005 (7)0.0072 (8)
C80.0509 (12)0.0274 (9)0.0408 (10)0.0007 (9)0.0013 (8)0.0009 (7)
C90.0451 (11)0.0350 (10)0.0357 (9)0.0095 (9)0.0011 (8)0.0002 (7)
C100.0335 (9)0.0410 (10)0.0281 (8)0.0020 (8)0.0012 (7)0.0037 (7)
C110.0381 (10)0.0316 (9)0.0278 (8)0.0010 (8)0.0018 (7)0.0000 (7)
C120.0417 (12)0.0441 (12)0.0745 (15)0.0073 (10)0.0014 (11)0.0048 (11)
C130.0462 (13)0.0394 (12)0.0660 (14)0.0022 (10)0.0032 (11)0.0105 (10)
C140.0292 (9)0.0276 (9)0.0251 (7)0.0015 (7)0.0004 (6)0.0019 (6)
C150.0305 (9)0.0233 (8)0.0285 (7)0.0010 (7)0.0019 (7)0.0014 (6)
C160.0339 (10)0.0319 (9)0.0329 (8)0.0007 (8)0.0005 (7)0.0033 (7)
C170.0283 (9)0.0374 (10)0.0501 (11)0.0018 (8)0.0022 (8)0.0050 (8)
C180.0371 (10)0.0336 (10)0.0445 (10)0.0021 (8)0.0139 (8)0.0062 (8)
C190.0450 (11)0.0366 (10)0.0299 (8)0.0014 (9)0.0063 (7)0.0037 (7)
N10.0300 (8)0.0256 (7)0.0220 (6)0.0012 (6)0.0013 (6)0.0002 (6)
N20.0349 (8)0.0321 (8)0.0263 (7)0.0018 (7)0.0022 (6)0.0019 (6)
O10.0511 (9)0.0397 (7)0.0297 (6)0.0063 (7)0.0097 (6)0.0030 (5)
O20.0422 (8)0.0408 (7)0.0293 (6)0.0142 (6)0.0013 (5)0.0043 (5)
O30.0313 (7)0.0436 (7)0.0249 (5)0.0102 (6)0.0001 (5)0.0007 (5)
O40.0345 (7)0.0561 (9)0.0241 (6)0.0083 (6)0.0008 (5)0.0022 (5)
Geometric parameters (Å, º) top
C1—O11.411 (2)C10—C111.386 (3)
C1—C21.522 (3)C10—H100.95
C1—H1A0.99C11—C131.507 (3)
C1—H1B0.99C12—H12A0.98
C2—N11.506 (2)C12—H12B0.98
C2—C31.517 (3)C12—H12C0.98
C2—H21C13—H13A0.98
C3—H3A0.98C13—H13B0.98
C3—H3B0.98C13—H13C0.98
C3—H3C0.98C14—O41.245 (2)
C4—N11.485 (2)C14—O31.262 (2)
C4—C51.521 (2)C14—C151.521 (2)
C4—H4A0.99C15—N21.342 (2)
C4—H4B0.99C15—C161.386 (2)
C5—O21.422 (2)C16—C171.387 (3)
C5—H5A0.99C16—H160.95
C5—H5B0.99C17—C181.377 (3)
C6—C71.390 (3)C17—H170.95
C6—C111.394 (3)C18—C191.381 (3)
C6—O21.395 (2)C18—H180.95
C7—C81.389 (3)C19—N21.340 (2)
C7—C121.507 (3)C19—H190.95
C8—C91.386 (3)N1—H1AN0.89 (2)
C8—H80.95N1—H1BN0.94 (3)
C9—C101.385 (3)O1—H1O0.91 (3)
C9—H90.95
O1—C1—C2113.47 (15)C11—C10—H10119.8
O1—C1—H1A108.9C10—C11—C6118.07 (18)
C2—C1—H1A108.9C10—C11—C13120.66 (19)
O1—C1—H1B108.9C6—C11—C13121.23 (17)
C2—C1—H1B108.9C7—C12—H12A109.5
H1A—C1—H1B107.7C7—C12—H12B109.5
N1—C2—C3108.71 (14)H12A—C12—H12B109.5
N1—C2—C1110.44 (14)C7—C12—H12C109.5
C3—C2—C1110.77 (16)H12A—C12—H12C109.5
N1—C2—H2109H12B—C12—H12C109.5
C3—C2—H2109C11—C13—H13A109.5
C1—C2—H2109C11—C13—H13B109.5
C2—C3—H3A109.5H13A—C13—H13B109.5
C2—C3—H3B109.5C11—C13—H13C109.5
H3A—C3—H3B109.5H13A—C13—H13C109.5
C2—C3—H3C109.5H13B—C13—H13C109.5
H3A—C3—H3C109.5O4—C14—O3126.00 (16)
H3B—C3—H3C109.5O4—C14—C15117.67 (15)
N1—C4—C5109.93 (13)O3—C14—C15116.33 (13)
N1—C4—H4A109.7N2—C15—C16123.14 (15)
C5—C4—H4A109.7N2—C15—C14115.90 (15)
N1—C4—H4B109.7C16—C15—C14120.95 (14)
C5—C4—H4B109.7C15—C16—C17118.44 (16)
H4A—C4—H4B108.2C15—C16—H16120.8
O2—C5—C4104.76 (13)C17—C16—H16120.8
O2—C5—H5A110.8C18—C17—C16119.29 (18)
C4—C5—H5A110.8C18—C17—H17120.4
O2—C5—H5B110.8C16—C17—H17120.4
C4—C5—H5B110.8C17—C18—C19118.24 (17)
H5A—C5—H5B108.9C17—C18—H18120.9
C7—C6—C11122.70 (17)C19—C18—H18120.9
C7—C6—O2118.86 (17)N2—C19—C18123.89 (16)
C11—C6—O2118.28 (17)N2—C19—H19118.1
C8—C7—C6117.58 (18)C18—C19—H19118.1
C8—C7—C12120.52 (19)C4—N1—C2114.95 (12)
C6—C7—C12121.88 (19)C4—N1—H1AN107.0 (15)
C9—C8—C7120.78 (19)C2—N1—H1AN110.9 (15)
C9—C8—H8119.6C4—N1—H1BN109.1 (14)
C7—C8—H8119.6C2—N1—H1BN108.2 (15)
C10—C9—C8120.42 (18)H1AN—N1—H1BN106.5 (19)
C10—C9—H9119.8C19—N2—C15116.98 (16)
C8—C9—H9119.8C1—O1—H1O105.0 (18)
C9—C10—C11120.38 (19)C6—O2—C5114.63 (12)
C9—C10—H10119.8
O1—C1—C2—N156.86 (18)O3—C14—C15—N213.7 (2)
O1—C1—C2—C3177.35 (14)O4—C14—C15—C1614.5 (3)
N1—C4—C5—O2171.12 (15)O3—C14—C15—C16165.17 (17)
C11—C6—C7—C82.4 (3)N2—C15—C16—C171.1 (3)
O2—C6—C7—C8173.02 (15)C14—C15—C16—C17179.96 (16)
C11—C6—C7—C12178.95 (18)C15—C16—C17—C180.1 (3)
O2—C6—C7—C125.6 (3)C16—C17—C18—C190.5 (3)
C6—C7—C8—C90.5 (3)C17—C18—C19—N20.1 (3)
C12—C7—C8—C9179.2 (2)C5—C4—N1—C2178.76 (16)
C7—C8—C9—C101.5 (3)C3—C2—N1—C4147.72 (17)
C8—C9—C10—C111.7 (3)C1—C2—N1—C490.56 (18)
C9—C10—C11—C60.1 (2)C18—C19—N2—C150.9 (3)
C9—C10—C11—C13178.14 (18)C16—C15—N2—C191.5 (3)
C7—C6—C11—C102.2 (2)C14—C15—N2—C19179.61 (16)
O2—C6—C11—C10173.25 (14)C7—C6—O2—C590.0 (2)
C7—C6—C11—C13179.77 (18)C11—C6—O2—C594.34 (19)
O2—C6—C11—C134.8 (2)C4—C5—O2—C6171.21 (16)
O4—C14—C15—N2166.60 (16)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1AN···N20.89 (2)2.35 (2)3.108 (2)143.5 (19)
N1—H1AN···O30.89 (2)2.04 (2)2.781 (2)140 (2)
N1—H1BN···O3i0.94 (3)1.78 (3)2.720 (2)175 (2)
O1—H1O···O4i0.91 (3)1.82 (3)2.723 (2)172 (3)
C3—H3B···O1ii0.982.533.430 (2)153
C4—H4B···O10.992.493.129 (2)122
Symmetry codes: (i) y+1, x+1, z+1/2; (ii) x+3/2, y1/2, z+1/4.
 

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