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Search query: reference database

2276 articles match your search "reference database"

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The RefXAS database under DAPHNE4NFDI enables users to access quality-controlled, curated X-ray absorption spectra of references along with important metadata and to share their data with the research community in easy steps.

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To scientists working with small-molecule or organometallic compounds, the Cambridge Structural Database constitutes an extremely important tool for reference to individual crystal structures and as a data source for statistical investigations. The article by Groom et al. provides updated information on the use, development and future of this database.

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Through the analysis of more than 115 000 metal-binding sites in metalloproteins, experimentalists are offered useful reference data that improve the understanding of metal-binding interactions and protein coordination. Carboxylate coordination, which is common for a variety of metals, is especially highlighted.

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The International Tables Symmetry Database (https://symmdb.iucr.org/), part of International Tables for Crystallography, is a collection of individual databases of crystallographic space-group and point-group information. Programs are provided to access and interactively visualize the data, and also allow new data to be calculated `on the fly', facilitating the in-depth study of group–subgroup relations, domain structures and twinning, families of related crystal structures and phase transitions, and the prediction of new crystal structures.

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A prototype application, pyDataRecognition, is described and tested. It has the goal that, given a measured powder diffraction pattern, it will return a list of publications from the IUCr Journals database that might be related based on the similarity to powder diffraction data deposited for those publications. This explores the possibility of a machine-readable literature where, for example, relevant studies may be found automatically through data similarity matches of online databases.

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Data curation practices of the Crystallography Open Database are described with greater focus being placed on the cif_validate program, capable of validating crystallographic information files against both DDL1 and DDLm dictionaries.

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IMRPS is an interactive database for identifying and displaying the inserted and modified residues present in the protein structures available in the Protein Data Bank.

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iQual is a computer program that utilizes the optimized Crystal_db database, derived from the Crystallography Open Database, for efficient searching and matching of experimental X-ray diffraction patterns for qualitative phase analysis, employing a two-step approach and matrix operations for enhanced efficiency.

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Experimental crystal structures that are amenable for inclusion in global phase diagrams as previously developed are identified.
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