Phase transition and atomic structure of Cd₆Tb 1/1 approximant to quasicrystal

We present an in-situ temperature study of the atomic structure of the 1/1 Cd6Tb approximant to an icosahedral quasicrystal. It belongs to the `Tsai' type family of quasicrystal and approximants whose archetype is the well-studied Cd-Yb system[1]. Its high temperature structure can be described as a bcc packing of a large Tsai atomic cluster, whose inner shell is a disordered tetrahedron at room temperature. As for most of the Cd6RE (RE=rare earth) approximant, the Cd6Tb phase undergoes a phase transition at 190 K to a phase of lower symmetry, resulting from an ordering of the inner tetrahedron[2]. Moreover, it has been shown that this phase undergoes a magnetic phase transition below 20 K, with an antiferromagnetic ordering of the Tb moment bearing atoms. It is thus particularly important to have a detailed structural study of this phase. We have carried out a systematic in situ measurement on a single grain from room temperature down to 40K on the crystal beam line located at the Soleil synchrotron. The structural phase transition is observed at about 190K. Using different attenuation, we have collected integrated intensity in a large dynamical range, leading to more than 60000 unique reflections in the C2/c monoclinic low temperature phase. The final wR2 values for room temperature and 40K are equal to 0.0726 and 0.0905 respectively. The resulting atomic structure will be compared to the well-studied approximant Zn6Sc, which is isostructural to Cd6Tb[3]. The ordering of the innermost tetrahedron leads to the distortion of the successive shells. The evolution of the high temperature phase, in particular just above Tc where pretransitional diffuse scattering is observed will be presented.

Temperature-induced phase transitions for amino acids with linear side chains

Two polymorphs are known to exist under ambient conditions for a number of amino acids (three for glycine). While investigations at high pressure have revealed a number of additional polymorphs, temperature-induced changes are rare. Low-temperature structures with modified side-chain conformations were identified for L- and DL-cysteine. Furthermore, racemates with linear side chains, such as DL-methionine and the non-standard DL-aminobutyric acid (DL-Abu), DL-aminopentanoic acid (DL-norvaline, DL-Nva) and DL-aminohexanoic acid (DL-norleucine, DL-Nle), undergo major crystalline rearrangements on transitions between P21/c and C2/c space groups [1], some of them entropy driven (disordering). As for the corresponding enantio-pure amino acids, we recently described related P21 and I2 structures at 105 K for L-Abu, both with Z' = 4 [2]. A short side-chain C-C bond (1.426 Å) in the only available CSD entry for L-Nle (at 298 K) [3] lead us to suspect that disorder could have been overlooked in the original refinement. L-Nva has not been described previously. We now present single-crystal X-ray determinations between 105 and 405 K for L-Abu, L-Nva and L-Nle, showing phase behavior of unprecedented complexity. For L-Abu and L-Nva we find three different forms in this temperature interval, while four different phases were found for L-Nle. Its known C2 structure with Z' = 1 prevails between 200 and 390 K, and the side chain is indeed disordered 2:1 over two positions. Above 390 K disorder is extensive; the space group remains C2 but cell parameters change. Upon cooling new low-temperature forms are observed at 200 and 170 K. Both are modulated, but to a different extent: data collected at 100 K reveal an almost commensurate phase, while the 180 K phase is fully incommensurate. This is, to our knowledge, the first observation of modulated structures for an amino acid, and also the first observations of major crystalline rearrangements akin to those seen for the corresponding racemates.

Magnetic Option in Jana2006: A Unified Approach by Shubnikov (Super)space Groups

The concept of Shubnikov (magnetic) symmetry becomes frequently used for description, solution and refinement of magnetic structures. Its growing importance is connected with the ease of application to various classes of magnetic structures having the translation periodicity identical, commensurate or incommensurate with the nuclear one. Recently generalized superspace approach [1] for incommensurately modulated magnetic structures allows for combination of nuclear and magnetic modulations. This unified description helps fully understand e.g. multiferroic phases. The program Jana2006 (http://jana.fzu.cz) combines the concept of Shubnikov (super)space groups with the representational analysis based on the decomposition of the magnetic configuration space into basis modes, which transform according to different physically irreducible representations (irreps) of the space group of the paramagnetic phase [2]. Moreover, Jana2006 can launch the recently developed program ISODISTORT [3] to obtain similar but more general analysis. The generalized symmetry concept facilitates data processing where symmetry related reflections for single crystal data can be merged and the list of generated reflections for powder data can be reduced to independent ones. Another benefit concerns calculation of magnetic structure factors, stability of refinement and logical way to describe twin domains. Unlike in the Fullproff program [6], Jana2006 can combine the nuclear and magnetic scattering internally without necessity to introduce two phases. It can also calculate magnetic structures with modulated parent phase where the modulation appears before the magnetic phase transition. The lecture shows manifold possibilities how to refine modulated magnetic structures from various experiments. Several recently solved magnetic structures will be presented.