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4-Oxo-N-phenyl-4H-chromene-2-carboxamide, C16H11NO3, crystallizes in the space group P21/n and its derivative 7-me­th­oxy-4-oxo-N-p-tolyl-4H-chromene-2-carboxamide, C18H15NO4, forms two polymorphs which crystallize in the space groups P21/c and P\overline{1}. The structures have an anti-rotamer conformation about the C-N bond; however, the amide O atom can be either trans- or cis-related to the O atom of the pyran ring. The latter compound also crystallizes as a hemihydrate, C18H15NO4·0.5H2O, in the space group C2/c. This compound has a similar structure to that of the unsolvated compound.

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Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270113029727/yf3049sup1.cif
Contains datablocks 1, 3a, general, 3c

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Structure factor file (CIF format) https://doi.org/10.1107/S0108270113029727/yf30491sup2.hkl
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Structure factor file (CIF format) https://doi.org/10.1107/S0108270113029727/yf30493asup3.hkl
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Chemical Markup Language (CML) file https://doi.org/10.1107/S0108270113029727/yf30491sup5.cml
Supplementary material

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Chemical Markup Language (CML) file https://doi.org/10.1107/S0108270113029727/yf30493asup6.cml
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Chemical Markup Language (CML) file https://doi.org/10.1107/S0108270113029727/yf30493csup7.cml
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CCDC references: 969285; 969286; 958771

Introduction top

Chromones are a group of natural and synthetic oxygen heterocyclic compounds having a high degree of chemical diversity that is frequently linked to a broad array of biological activities. In particular, chromone carboxamides have been used by our group as a basic structure for the discovery and development of new chemical entities (NCEs) with application in neurodegenerative illnesses (Gaspar, Reis et al., 2011) and cancer (Gaspar et al. 2012). In fact, decoration on the chromone carboxamide core have led to promising outcomes either as mono­amine oxidase B (MAO-B) inhibitors or ligands for the adenosine receptors, (Gaspar, Reis et al., 2011; Gaspar et al., 2012).

Accordingly 7-meth­oxy-4-oxo-N-phenyl-4H-chromene-2-carboxamide, (1), 4-oxo-N-phenyl-4H-chromene-2-carboxamide, (2), and 7-meth­oxy-4-oxo-N-p-tolyl-4H-chromene-2-carboxamide, (3), have been synthesized and characterised by NMR and MS–EI (Gaspar et al., 2013). The crystal and molecular structure of (2) has been reported by (Reis et al., 2013). The unambiguous characterization of those compounds with respect to their molecular structures and conformations as well as their supra­molecular structures, permits the elucidation of the degree of solvation and the identification of polymorphism.

This type of information represents a valuable tool for moving on the drug discovery project based on the chromone carboxamide scaffold as it contributes to a deep exploration of structure–activity relationships and leads to the unveiling of satisfactory molecular docking models.

This work reports structures of chromones (1) and (3). Chromone (1) (Fig. 1) consists of a chromone ring linked at the 2-position to a phenyl ring via an amide group. Fig. 1 shows compound (3) which is an analogue of (1), built with a meth­oxy substituent at position 7 of the chromone ring and a methyl group at the para-position of the exocyclic phenyl ring. Compound (3) was found to crystallize in 3 different forms, a hemihydrate (3a) and polymorphic forms (3b) and (3c). Form (3b) has been characterized previously (Gomes et al., 2013) so this structure will be used for comparative discussion purposes. It crystallized in the space group P21/c, while polymorph (3c) crystallized in the space group P1. Compound (3a) is a hemihydrate of (3b) and crystallizes in the space group C2/c. Furthermore, (3a) was found to be similar to 7-meth­oxy-4-oxo-N-phenyl-4H-chromene-2-carboxamide, (2a) (Reis et al., 2013). The x and z atomic coordinates of the latter compound are similar to those of (3a); however, the y coordinates are different.

Experimental top

Synthesis and crystallization top

Chromones (1), (2), and (3) were obtained following synthetic strategies described elsewhere (Gaspar, Silva et al., 2011; Gaspar et al., 2013; Reis et al., 2013). In all the reactions, the crude products were purified by column chromatography and then recrystallized.The spectroscopic data (NMR and MS–EI) are in accordance with the literature (Gaspar, Silva et al., 2011; Gaspar et al., 2013; Reis et al., 2013). Crystals suitable for X-ray analysis were recrystallised from acetone [for (3a)] or methanol [for (3c)].

Refinement top

For (1), H atoms were treated as riding atoms, with aromatic C—H = 0.93 Å and Uiso = 1.2Ueq(C). For (3a) and (3c), H atoms were treated as riding atoms, with aromatic C—H = 0.95 Å and methyl C—H = 0.98Å, with Uiso = 1.5Ueq(C). The H atom attached to N2 was located on a difference map and refined and its position, and those of the methyl H atoms checked on a final difference Fourier map. In (3a), the position of the H atom on the water molecule, which sits on a twofold axis, was located on a difference Fourier map and refined and its position checked on a final difference Fourier map.

The higher R factor and goodness-of-fit for (3a) are a result of the quality of the crystals of this compounds, which are very thin plates resulting in a data set with a large number of weak reflections; the number of reflections classed as observed is only 81%, despite a data completeness of 0.983 at a θ of 25°. The presence of a large number of weak reflections, accounts for the high K values in the analysis of variance.

Results and Discussion top

Molecular conformation top

The displacement ellipsoid diagrams of (1), (3b) and (3c) with the atom-numbering schemes are shown in Figs. 2–4. Fig. 5 shows schematically the conformations found around the C—N rotamer for those compounds. All compounds have an anti-rotamer conformation, as expected since this conformation lowers the steric hindrance between the two aromatic rings as compared to the syn-rotamer conformation; A1 refers to the –anti--rotamer with cis related-O atoms and A2 refers to the –anti-rotamer with trans-related O atoms.

Structural analysis reveals that (1) adopts an A1 conformation where atom O1 of the pyran ring is cis-related with the O atom of the carbonyl group. This conformation contrasts with that adopted by the majority of similar chromones that have been previously characterized (Gomes et al., 2013) and with those of the related compounds (2a) and (3b), as can be seen in Fig. 1. Nevertheless this is the same conformation found for compound (3c) and for N-(4-bromo­phenyl)-4-oxo-4H-chromene-2-carboxamide (Gomes et al., 2013). This conformation precludes the formation of an intra­molecular N—H···O(pyran) hydrogen bond that can be found in chromones where the amide O atom is trans-related to the pyran O atom, as happens in (2a) and (3a). However, a weak intra­molecular bond does exist between C(ortho)—H of the benzyl ring and the carboxamide O atom, making an S(6) ring (Bernstein et al., 1995).

In (2a), (3a) and (3b), the amide O atom is trans-related to atom O1 of the pyran ring, see A2 of Fig. 5, allowing for the possible establishment of an intra­molecular hydrogen bond, N—H···O(pyran) forming a, S(5) ring (Gomes et al., 2013) and a C(ortho)—H···O intra­molecular hydrogen bond making an S(6) ring (Bernstein et al., 1995). In the hydrated compounds, atom N2 also acts as a donor to the water O atom, linking the crystallization solvent to the chromone.

Relevant data for the discussion of molecular structures and conformations of the compounds is presented in Table 5; θ1 refers to the dihedral angles between the mean planes of the chromone and phenyl rings, θ2 to the dihedral angle between the best plane of the chromone and the plane defined by atoms O2/C21/N2 of the amide moiety, whereas θ3 refers to the dihedral angle between this plane and the best plane of the benzene ring. Since the aromatic rings are practically planar, the dihedral θ1 qu­anti­fies the degree of bend and/or twist between the aromatic rings.

The dihedral angle of 6.57 (7)° for (1) is mainly due to the bending between the two aromatic rings since the values of θ2 and θ3 are similar.

In the case of the 7-meth­oxy compounds, the dihedral angles between the chromone and exocyclic benzene rings is of the same order for all compounds except (3b) which has a value almost double the others. The value of θ3 is very much greater than θ2 for this compound. This is the reverse of what is found for the other 7-meth­oxy compounds in which θ2 is greater than θ3.

Comparing the θ2 and θ3 values for those compounds and the difference between θ2 and θ3 is very close to the value of θ1 which suggests that the twist of the chromone and exocyclic phenyl rings with respect to the O2—C21—N2 plane is the main contributor to the dihedral angle between the rings. In the case of (3b), the main contribution is from the twist between the benzene ring and the O2—C21—N2 plane which is the main contributor in the remaining compounds it is the twist between the chromone ring and the O2—C21—N2 plane.

Polymorphism assumes a special relevance in these chromone carboxamides as both conformational [(3b)/(3c) pair] and pseudo-polymorphism [(2a)/(3a) pair] is observed. The different polymorphs were obtained with different solvents of crystallization showing that the solvent plays an important role on the crystallization processes. The hemihydrated compound (3a) was obtained when chloro­form and acetone solutions were used for crystallization while the water free compounds (3b) and (3c) were obtained in ethyl acetate/n-hexane and methanol, respectively. Attempts to isolate the possible nonhydrated polymorphs of (2) were unsuccessful. Several crystallization solvents were tried (acetone, methanol, di­chloro­ethane, chloro­form, di­chloro­methane and ethyl acetate), but, in all cases, the hemihydrated structure (2a) was obtained.

The identification of polymorphism assumes a special relevance in these compounds since they will be used in pharmacological assays. Purification of those chromones by crystallization gives different conformers. As a result extra care in the selection of the purification technique is of utmost relevance. Also the structural results show that, in (3) both hydrated and nonhydrated forms of the A2 conformation are stable and so previous identification of which form is present in the sample is mandatory in order to perform accurate dose–activity studies.

Supra­molecular structure top

The geometric parameters for the inter­molecular hydrogen-bond inter­actions are given in Tables 2, 3 and 4.

In (1), the molecules are linked across the centre of symmetry at (1/2, 1, 1/2), forming head-to-tail centrosymmetric dimers which are linked by the N2—H2···O4i [symmetry code: (i) -x+1, -y+2, -z+1), which forms an R22(14) ring (Bernstein et al., 1995). This is supplemented by weak C3—H3···O4i and C21—H212···O4i hydrogen bonds which form R22(8) and R22(14) rings (Bernstein et al., 1995). respectively (Fig. 6). The N2–H2···O2ii [symmetry code: (ii) x, y+1, z] hydrogen bond links the molecules into C(4) chains (Bernstein et al., 1995) which run parallel to the b axis. This is a weaker N—H···O inter­action since the angle at H2 is 124 (17)° (Fig. 7). The dimers are joined by centrosymmetrically related C7—H7···O2iii [symmetry code: (iii) -x+2, -y, -z+1] inter­actions across the centre of symmetry at (1, 0, 1/2), forming R22(16) rings (Bernstein et al., 1995) (Fig. 8).

In (3a), the N2—H2···O3 (within the selected asymmetric unit) and the N—H group at (-x+1, y, -z+1/2) act as hydrogen-bond donors to the water molecule at (1/2, y, 1/4) which in turn acts as hydrogen donor via O3—H3···O4iv [symmetry code: (iv) -x+1, y-1, -z+1/2] and to O4 at (x, y-1, z) (Fig. 9). This is supplemented by the weak C215—H215···O2v [symmetry code: (v) x, y-1, z] inter­action. This forms a ribbon structure which runs parallel to the b axis in which the molecules are related by unit translations along the b axis and by the action of the twofold axis on which the water molecule sits. Adjacent chains are linked by a weak C71—H(methyl) inter­action to atom O2 at (-x+1/2, y+1/2, -z+1/2) forming a stacked sheet of molecules which lies in the ab plane (Fig. 10). There are two such anti­parallel sheets in the unit cell. There are two ππ contacts in which the centre-of-gravity separations are less that 4.0 Å. These involve the pyran rings at (x, y, z) and (-x+1, y, z-1/2) in which the centre-of-gravity to centre-of-gravity distance is 3.765 (4) Å and the chromone phenyl ring at (x, y, z) and the p-tolyl phenyl ring at (-x+1/2, y+1, -z+1/2), in which this distance is 3.594 (4) Å.

Dimers similar to those in (1) are found in the structure in (3c). Here the molecules are linked across the centre of symmetry at (1,1/2,1/2) forming head-to-tail centrosymmetric dimers which are linked by the N2—H2···O4vi hydrogen bond [symmetry code: (vi) -x+2, -y+1, -z+1], which forms an R22(14) ring (Bernstein et al., 1995). This is supplemented by weak C3—H3···O4vi and C212—H212···O4vi hydrogen bonds which form R22(8) and R22(14) rings (Bernstein et al., 1995), respectively (Fig. 11). These dimers are also found in the structure of N-(4-bromo­phenyl)-4-oxo-4H-chromene-2-carboxamide (Gomes et al., 2013). The dimers are also linked by the C216—H216···O2vii [symmetry code: (vii) -x, -y, -z+1] weak hydrogen bond which lie across the centre of symmetry at (0, 0, 1/2) (Fig. 12). The dimers are also linked to form chains by the C6—H6···O7viii [symmetry code: (viii) -x+2, -y, -z] weak hydrogen bond which lie across the centre of symmetry at (1, 0, 0). These inter­actions combine to link the molecules into a two-dimensional sheet (Fig. 13).

In (3b), the molecules are linked into chains by a hydrogen bond between the amino H atom and the 4-oxo O atom atom reinforced by weak C—H···O inter­actions. C—H···π and ππ stacking inter­actions are also present (Gomes et al., 2013)

Related literature top

For related literature, see: Bernstein et al. (1995); Gaspar et al. (2012, 2013); Gaspar, Reis, Fonseca, Milhazes, Vina, Uriarte & Borges (2011); Gaspar, Silva, Yanez, Vina, Orallo, Ortuso, Uriarte, Alcaro & Borges (2011); Gomes et al. (2013); Reis et al. (2013).

Computing details top

Data collection: SMART (Bruker, 1997) for (1); CrystalClear-SM Expert (Rigaku, 2011) for (3a), (3c). Cell refinement: SMART (Bruker, 1997) for (1); CrystalClear-SM Expert (Rigaku, 2011) for (3a), (3c). Data reduction: SAINT (Bruker, 1997) for (1); CrystalClear-SM Expert (Rigaku, 2011) for (3a), (3c). For all compounds, program(s) used to solve structure: SHELXS97 (Sheldrick, 2008). Program(s) used to refine structure: OSCAIL (McArdle et al., 2004) and SHELXL97 (Sheldrick, 2008) for (1); OSCAIL (McArdle et al., 2004), SHELXLE (Hübschle et al., 2011) and SHELXL97 (Sheldrick, 2008) for (3a), (3c). For all compounds, molecular graphics: Mercury (Macrae et al., 2006). Software used to prepare material for publication: OSCAIL (McArdle et al., 2004) and SHELXS97 (Sheldrick, 2008) for (1); OSCAIL (McArdle et al., 2004) and SHELXL97 (Sheldrick, 2008) for (3a), (3c).

Figures top
[Figure 1] Fig. 1. The relationships of the compounds discussed in this paper, showing the conformations of the C—N rotamers formed. Note that the conformations of carboxamides (1) and (3c) are the same, but different from those of (2a), (3a) and (3b) which are the same.
[Figure 2] Fig. 2. A view of the asymmetric unit of (1), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 70% probability level.
[Figure 3] Fig. 3. A view of the asymmetric unit of hemihydrate (3a), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 70% probability level. The dashed bonds show the intramolecular hydrogen bonds and the hydrogen bond between atom N2 and the water molecule.
[Figure 4] Fig. 4. A view of the asymmetric unit of (3c), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 70% probability level.
[Figure 5] Fig. 5. Possible intramolecular hydrogen bonding for compounds discussed in this paper and related compounds.
[Figure 6] Fig. 6. The centrosymmetric dimer formed by the molecules of (1). Hydrogen bonds are indicated by dashed lines. H atoms not involved in hydrogen bonding have been omitted for clarity.
[Figure 7] Fig. 7. The N2—H2···O2 C(4) chain formed by the molecules of (1). This chain runs parallel to the b axis. Hydrogen bonds are indicated by dashed lines. H atoms not involved in hydrogen bonding have been omitted for clarity.
[Figure 8] Fig. 8. Part of the structure of (1), showing the chain of linked centrosymmetric dimers formed by the action of the weak C7—H7···O2 centrosymmetrically related hydrogen bonds. Hydrogen bonds are indicated by dashed lines. H atoms not involved in hydrogen bonding have been omitted for clarity.
[Figure 9] Fig. 9. Part of the crystal structure of hemihydrate (3a), showing the hydrogen bonding around the water molecule viewed down the a axis. Hydrogen bonds are indicated b dashed lines. H atoms not involved in hydrogen bonding have been omitted for clarity.
[Figure 10] Fig. 10. Part of the crystal structure of hemihydrate (3a), showing the chain formed by molecules linked by the water molecules running parallel to the b axis. Adjacent chains are linked by a weak C—H(methyl)···O hydrogen bond. Hydrogen bonds are indicated by dashed lines. H atoms not involved in hydrogen bonding have been omitted for clarity.
[Figure 11] Fig. 11. The centrosymmetric dimer formed by the molecules of (3c). Hydrogen bonds are indicated by dashed lines. H atoms not involved in hydrogen bonding have been omitted for clarity.
[Figure 12] Fig. 12. Part of the structure of (3c), showing the chain of linked dimers. Hydrogen bonds are indicated by dashed lines. H atoms not involved in hydrogen bonding have been omitted for clarity.
[Figure 13] Fig. 13. Part of the structure of (3c), showing the sheet formed by linked dimers. Hydrogen bonds are indicated by dashed lines. H atoms not involved in hydrogen bonding have been omitted for clarity.
(1) 4-Oxo-N-phenyl-4H-chromene-2-carboxamide top
Crystal data top
C16H11NO3F(000) = 552
Mr = 265.26Dx = 1.450 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 7463 reflections
a = 8.6591 (12) Åθ = 2.4–28.0°
b = 4.9980 (7) ŵ = 0.10 mm1
c = 28.346 (4) ÅT = 293 K
β = 98.042 (3)°Plate, colourless
V = 1214.7 (3) Å30.45 × 0.42 × 0.10 mm
Z = 4
Data collection top
Bruker SMART 1000 CCD
diffractometer
2888 independent reflections
Radiation source: fine-focus sealed tube1826 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.029
profile data from ω–scansθmax = 28.0°, θmin = 2.4°
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
h = 1111
Tmin = 0.956, Tmax = 0.990k = 66
7463 measured reflectionsl = 3719
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.125H atoms treated by a mixture of independent and constrained refinement
S = 1.02 w = 1/[σ2(Fo2) + (0.0551P)2 + 0.2464P]
where P = (Fo2 + 2Fc2)/3
2888 reflections(Δ/σ)max = 0.002
185 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = 0.19 e Å3
Crystal data top
C16H11NO3V = 1214.7 (3) Å3
Mr = 265.26Z = 4
Monoclinic, P21/nMo Kα radiation
a = 8.6591 (12) ŵ = 0.10 mm1
b = 4.9980 (7) ÅT = 293 K
c = 28.346 (4) Å0.45 × 0.42 × 0.10 mm
β = 98.042 (3)°
Data collection top
Bruker SMART 1000 CCD
diffractometer
2888 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
1826 reflections with I > 2σ(I)
Tmin = 0.956, Tmax = 0.990Rint = 0.029
7463 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0430 restraints
wR(F2) = 0.125H atoms treated by a mixture of independent and constrained refinement
S = 1.02Δρmax = 0.24 e Å3
2888 reflectionsΔρmin = 0.19 e Å3
185 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.82867 (13)0.3480 (2)0.49648 (4)0.0361 (3)
O20.75473 (16)0.2649 (2)0.40550 (4)0.0502 (4)
O40.58673 (14)0.8742 (2)0.56868 (4)0.0461 (3)
N20.63731 (17)0.6713 (3)0.39309 (5)0.0396 (4)
H20.611 (2)0.811 (4)0.4066 (7)0.055 (6)*
C20.72650 (17)0.5261 (3)0.47339 (5)0.0318 (4)
C30.64846 (19)0.7060 (3)0.49584 (6)0.0359 (4)
H30.58320.82720.47790.043*
C40.66284 (18)0.7170 (3)0.54743 (6)0.0341 (4)
C4A0.77247 (17)0.5227 (3)0.57203 (6)0.0322 (4)
C50.8003 (2)0.5045 (4)0.62179 (6)0.0417 (4)
H50.74760.61760.64020.050*
C60.9046 (2)0.3209 (4)0.64363 (6)0.0472 (5)
H60.92210.30940.67670.057*
C70.9842 (2)0.1522 (4)0.61632 (6)0.0422 (4)
H71.05560.02990.63140.051*
C80.95899 (18)0.1634 (3)0.56746 (6)0.0369 (4)
H81.01220.04970.54930.044*
C8A0.85219 (17)0.3484 (3)0.54566 (5)0.0314 (4)
C210.70918 (17)0.4752 (3)0.42037 (6)0.0340 (4)
C2110.59303 (19)0.6705 (3)0.34289 (6)0.0344 (4)
C2120.4823 (2)0.8557 (4)0.32447 (6)0.0471 (5)
H2120.44100.97430.34470.056*
C2130.4326 (2)0.8646 (4)0.27588 (7)0.0548 (5)
H2130.35760.98890.26360.066*
C2140.4934 (2)0.6910 (4)0.24557 (7)0.0520 (5)
H2140.45910.69630.21300.062*
C2150.6047 (2)0.5105 (4)0.26384 (6)0.0542 (5)
H2150.64680.39440.24340.065*
C2160.6561 (2)0.4978 (4)0.31244 (6)0.0479 (5)
H2160.73200.37450.32440.057*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0405 (6)0.0361 (6)0.0310 (6)0.0110 (5)0.0029 (5)0.0007 (5)
O20.0680 (8)0.0432 (7)0.0383 (7)0.0215 (6)0.0031 (6)0.0039 (6)
O40.0517 (7)0.0467 (7)0.0399 (7)0.0175 (6)0.0068 (6)0.0053 (6)
N20.0541 (9)0.0323 (8)0.0310 (8)0.0100 (7)0.0012 (6)0.0033 (6)
C20.0326 (8)0.0284 (8)0.0335 (9)0.0015 (6)0.0016 (7)0.0015 (7)
C30.0387 (9)0.0332 (9)0.0347 (9)0.0084 (7)0.0008 (7)0.0009 (7)
C40.0342 (8)0.0307 (8)0.0371 (9)0.0027 (7)0.0034 (7)0.0028 (7)
C4A0.0321 (8)0.0299 (8)0.0342 (8)0.0001 (6)0.0027 (6)0.0014 (7)
C50.0484 (10)0.0415 (10)0.0353 (10)0.0076 (8)0.0058 (8)0.0032 (8)
C60.0587 (11)0.0497 (11)0.0319 (9)0.0088 (9)0.0015 (8)0.0044 (8)
C70.0423 (9)0.0410 (10)0.0415 (10)0.0088 (8)0.0008 (8)0.0080 (8)
C80.0356 (9)0.0351 (9)0.0401 (9)0.0059 (7)0.0055 (7)0.0024 (7)
C8A0.0324 (8)0.0303 (8)0.0309 (8)0.0015 (6)0.0025 (6)0.0012 (7)
C210.0348 (8)0.0315 (9)0.0350 (9)0.0028 (7)0.0027 (7)0.0021 (7)
C2110.0396 (9)0.0328 (9)0.0299 (8)0.0022 (7)0.0016 (7)0.0008 (7)
C2120.0545 (11)0.0466 (11)0.0400 (10)0.0141 (9)0.0066 (8)0.0012 (8)
C2130.0577 (12)0.0582 (13)0.0450 (11)0.0127 (10)0.0053 (9)0.0099 (10)
C2140.0638 (12)0.0558 (12)0.0331 (10)0.0046 (10)0.0043 (9)0.0012 (9)
C2150.0721 (13)0.0539 (12)0.0357 (10)0.0073 (10)0.0046 (9)0.0068 (9)
C2160.0568 (11)0.0451 (11)0.0400 (11)0.0111 (9)0.0007 (9)0.0032 (8)
Geometric parameters (Å, º) top
O1—C21.3571 (17)C6—H60.9300
O1—C8A1.3805 (18)C7—C81.373 (2)
O2—C211.2182 (19)C7—H70.9300
O4—C41.2353 (18)C8—C8A1.390 (2)
N2—C211.346 (2)C8—H80.9300
N2—C2111.421 (2)C211—C2121.382 (2)
N2—H20.84 (2)C211—C2161.386 (2)
C2—C31.338 (2)C212—C2131.385 (3)
C2—C211.511 (2)C212—H2120.9300
C3—C41.451 (2)C213—C2141.377 (3)
C3—H30.9300C213—H2130.9300
C4—C4A1.464 (2)C214—C2151.368 (3)
C4A—C8A1.392 (2)C214—H2140.9300
C4A—C51.400 (2)C215—C2161.389 (2)
C5—C61.373 (2)C215—H2150.9300
C5—H50.9300C216—H2160.9300
C6—C71.391 (2)
C2—O1—C8A118.69 (12)C7—C8—H8120.7
C21—N2—C211127.70 (15)C8A—C8—H8120.7
C21—N2—H2118.2 (14)O1—C8A—C8116.28 (14)
C211—N2—H2114.0 (14)O1—C8A—C4A121.94 (13)
C3—C2—O1123.37 (14)C8—C8A—C4A121.78 (15)
C3—C2—C21126.87 (14)O2—C21—N2125.14 (16)
O1—C2—C21109.66 (13)O2—C21—C2119.84 (14)
C2—C3—C4121.80 (14)N2—C21—C2114.98 (14)
C2—C3—H3119.1C212—C211—C216119.68 (15)
C4—C3—H3119.1C212—C211—N2116.89 (15)
O4—C4—C3122.63 (14)C216—C211—N2123.43 (15)
O4—C4—C4A122.95 (15)C211—C212—C213119.99 (17)
C3—C4—C4A114.41 (13)C211—C212—H212120.0
C8A—C4A—C5118.15 (14)C213—C212—H212120.0
C8A—C4A—C4119.75 (14)C214—C213—C212120.51 (18)
C5—C4A—C4122.10 (14)C214—C213—H213119.7
C6—C5—C4A120.48 (16)C212—C213—H213119.7
C6—C5—H5119.8C215—C214—C213119.34 (17)
C4A—C5—H5119.8C215—C214—H214120.3
C5—C6—C7120.00 (16)C213—C214—H214120.3
C5—C6—H6120.0C214—C215—C216121.11 (18)
C7—C6—H6120.0C214—C215—H215119.4
C8—C7—C6121.06 (16)C216—C215—H215119.4
C8—C7—H7119.5C211—C216—C215119.35 (17)
C6—C7—H7119.5C211—C216—H216120.3
C7—C8—C8A118.51 (15)C215—C216—H216120.3
C8A—O1—C2—C31.0 (2)C4—C4A—C8A—O11.5 (2)
C8A—O1—C2—C21175.36 (13)C5—C4A—C8A—C81.2 (2)
O1—C2—C3—C42.5 (2)C4—C4A—C8A—C8179.07 (15)
C21—C2—C3—C4173.17 (15)C211—N2—C21—O23.5 (3)
C2—C3—C4—O4176.89 (16)C211—N2—C21—C2174.27 (15)
C2—C3—C4—C4A1.9 (2)C3—C2—C21—O2160.73 (17)
O4—C4—C4A—C8A178.85 (16)O1—C2—C21—O215.5 (2)
C3—C4—C4A—C8A0.1 (2)C3—C2—C21—N217.1 (2)
O4—C4—C4A—C50.9 (3)O1—C2—C21—N2166.68 (13)
C3—C4—C4A—C5179.70 (16)C21—N2—C211—C212161.49 (17)
C8A—C4A—C5—C60.6 (3)C21—N2—C211—C21619.2 (3)
C4—C4A—C5—C6179.61 (16)C216—C211—C212—C2131.2 (3)
C4A—C5—C6—C70.3 (3)N2—C211—C212—C213179.44 (17)
C5—C6—C7—C80.8 (3)C211—C212—C213—C2140.4 (3)
C6—C7—C8—C8A0.2 (3)C212—C213—C214—C2150.6 (3)
C2—O1—C8A—C8179.48 (14)C213—C214—C215—C2160.7 (3)
C2—O1—C8A—C4A1.1 (2)C212—C211—C216—C2151.1 (3)
C7—C8—C8A—O1178.71 (15)N2—C211—C216—C215179.58 (17)
C7—C8—C8A—C4A0.7 (2)C214—C215—C216—C2110.2 (3)
C5—C4A—C8A—O1178.25 (15)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N2—H2···O2i0.84 (2)2.59 (2)3.140 (2)124 (17)
N2—H2···O4ii0.84 (2)2.50 (2)3.2690 (19)153 (18)
C3—H3···O4ii0.932.363.294 (2)179
C212—H212···O4ii0.932.613.444 (2)149
C7—H7···O2iii0.932.543.199 (2)128
Symmetry codes: (i) x, y+1, z; (ii) x+1, y+2, z+1; (iii) x+2, y, z+1.
(3a) 7-Methoxy-4-oxo-N-p-tolyl-4H-chromene-2-carboxamide hemihydrate top
Crystal data top
C18H15NO4·0.5H2OF(000) = 1336
Mr = 318.32Dx = 1.351 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71075 Å
Hall symbol: -C 2ycCell parameters from 3415 reflections
a = 12.989 (12) Åθ = 2.8–27.4°
b = 8.301 (7) ŵ = 0.10 mm1
c = 29.11 (2) ÅT = 100 K
β = 94.29 (2)°Plate, colourless
V = 3130 (4) Å30.23 × 0.12 × 0.02 mm
Z = 8
Data collection top
Rigaku Saturn724+ (2x2 bin mode)
diffractometer
2716 independent reflections
Radiation source: Sealed Tube2401 reflections with I > 2σ(I)
Mirrors monochromatorRint = 0.071
Detector resolution: 28.5714 pixels mm-1θmax = 25.0°, θmin = 2.9°
profile data from ω–scansh = 1510
Absorption correction: multi-scan
(CrystalClear-SM Expert; Rigaku, 2011)
k = 99
Tmin = 0.978, Tmax = 0.998l = 3434
11349 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.096Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.208H atoms treated by a mixture of independent and constrained refinement
S = 1.25 w = 1/[σ2(Fo2) + (0.0516P)2 + 10.5932P]
where P = (Fo2 + 2Fc2)/3
2716 reflections(Δ/σ)max < 0.001
223 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = 0.32 e Å3
Crystal data top
C18H15NO4·0.5H2OV = 3130 (4) Å3
Mr = 318.32Z = 8
Monoclinic, C2/cMo Kα radiation
a = 12.989 (12) ŵ = 0.10 mm1
b = 8.301 (7) ÅT = 100 K
c = 29.11 (2) Å0.23 × 0.12 × 0.02 mm
β = 94.29 (2)°
Data collection top
Rigaku Saturn724+ (2x2 bin mode)
diffractometer
2716 independent reflections
Absorption correction: multi-scan
(CrystalClear-SM Expert; Rigaku, 2011)
2401 reflections with I > 2σ(I)
Tmin = 0.978, Tmax = 0.998Rint = 0.071
11349 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0960 restraints
wR(F2) = 0.208H atoms treated by a mixture of independent and constrained refinement
S = 1.25 w = 1/[σ2(Fo2) + (0.0516P)2 + 10.5932P]
where P = (Fo2 + 2Fc2)/3
2716 reflectionsΔρmax = 0.24 e Å3
223 parametersΔρmin = 0.32 e Å3
Special details top

Experimental. The data was restricted to 25.02 degrees for the refinement.

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.36292 (19)0.2421 (3)0.23558 (8)0.0288 (7)
O20.3694 (2)0.3765 (3)0.35043 (9)0.0342 (7)
O70.3261 (2)0.1180 (3)0.07462 (9)0.0326 (7)
O30.50000.0576 (5)0.25000.0295 (9)
H3A0.552 (5)0.119 (8)0.263 (2)0.11 (2)*
O40.3617 (2)0.7280 (3)0.20722 (10)0.0356 (7)
N20.3991 (2)0.1256 (4)0.32042 (11)0.0267 (7)
H20.413 (4)0.068 (6)0.2936 (17)0.063 (16)*
C20.3689 (3)0.3544 (5)0.26967 (12)0.0264 (8)
C30.3671 (3)0.5150 (5)0.26206 (13)0.0295 (9)
H30.36940.58690.28750.035*
C40.3617 (3)0.5792 (5)0.21554 (14)0.0299 (9)
C4A0.3558 (3)0.4579 (5)0.17918 (14)0.0298 (9)
C50.3490 (3)0.5015 (5)0.13225 (13)0.0311 (9)
H50.35020.61190.12370.037*
C60.3405 (3)0.3837 (5)0.09886 (14)0.0334 (9)
H60.33680.41330.06730.040*
C70.3373 (3)0.2201 (5)0.11111 (13)0.0293 (9)
C80.3456 (3)0.1730 (5)0.15668 (13)0.0306 (9)
H80.34520.06230.16500.037*
C8A0.3545 (3)0.2934 (5)0.19010 (12)0.0265 (9)
C210.3793 (3)0.2868 (5)0.31771 (12)0.0255 (8)
C710.3211 (3)0.0530 (5)0.08438 (14)0.0359 (10)
H71A0.31000.11280.05540.054*
H71B0.26390.07400.10370.054*
H71C0.38610.08780.10070.054*
C2110.4070 (3)0.0288 (5)0.36091 (12)0.0265 (8)
C2120.4098 (3)0.0889 (5)0.40580 (13)0.0317 (9)
H2120.40750.20170.41110.038*
C2130.4158 (3)0.0172 (5)0.44256 (14)0.0321 (9)
H2130.41750.02460.47300.039*
C2140.4195 (3)0.1847 (5)0.43626 (13)0.0330 (9)
C2150.4184 (3)0.2425 (5)0.39132 (13)0.0318 (9)
H2150.42190.35530.38610.038*
C2160.4123 (3)0.1375 (5)0.35404 (13)0.0298 (9)
H2160.41160.17920.32360.036*
C2170.4251 (4)0.2995 (6)0.47647 (14)0.0427 (11)
H21A0.36250.36570.47520.064*
H21B0.43070.23820.50530.064*
H21C0.48560.36930.47510.064*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0230 (15)0.0271 (15)0.0361 (15)0.0016 (11)0.0017 (11)0.0012 (11)
O20.0365 (17)0.0313 (16)0.0353 (15)0.0012 (13)0.0068 (12)0.0044 (13)
O70.0316 (16)0.0341 (16)0.0321 (14)0.0019 (13)0.0021 (12)0.0004 (12)
O30.027 (2)0.029 (2)0.033 (2)0.0000.0050 (17)0.000
O40.0310 (17)0.0239 (15)0.0511 (18)0.0010 (12)0.0017 (13)0.0018 (13)
N20.0221 (18)0.0305 (18)0.0276 (17)0.0009 (14)0.0025 (13)0.0005 (14)
C20.0155 (19)0.031 (2)0.033 (2)0.0029 (16)0.0021 (14)0.0112 (17)
C30.024 (2)0.028 (2)0.037 (2)0.0032 (17)0.0012 (16)0.0040 (17)
C40.0130 (19)0.031 (2)0.045 (2)0.0013 (16)0.0010 (16)0.0027 (18)
C4A0.018 (2)0.028 (2)0.043 (2)0.0006 (16)0.0018 (16)0.0023 (17)
C50.021 (2)0.034 (2)0.038 (2)0.0016 (17)0.0026 (16)0.0068 (18)
C60.023 (2)0.043 (2)0.035 (2)0.0028 (18)0.0031 (16)0.0047 (18)
C70.0176 (19)0.038 (2)0.033 (2)0.0035 (17)0.0015 (15)0.0013 (17)
C80.0155 (19)0.031 (2)0.045 (2)0.0008 (16)0.0029 (16)0.0017 (18)
C8A0.0154 (19)0.032 (2)0.032 (2)0.0039 (16)0.0012 (15)0.0035 (17)
C210.0150 (18)0.029 (2)0.032 (2)0.0022 (16)0.0006 (14)0.0021 (17)
C710.032 (2)0.041 (3)0.035 (2)0.0028 (19)0.0070 (17)0.0085 (18)
C2110.0166 (19)0.033 (2)0.030 (2)0.0010 (16)0.0047 (14)0.0006 (16)
C2120.023 (2)0.034 (2)0.038 (2)0.0002 (17)0.0019 (16)0.0037 (18)
C2130.023 (2)0.039 (2)0.034 (2)0.0003 (18)0.0005 (16)0.0073 (18)
C2140.024 (2)0.044 (3)0.031 (2)0.0012 (18)0.0010 (16)0.0009 (18)
C2150.023 (2)0.035 (2)0.037 (2)0.0033 (17)0.0035 (16)0.0011 (18)
C2160.020 (2)0.032 (2)0.037 (2)0.0001 (17)0.0048 (16)0.0034 (17)
C2170.046 (3)0.044 (3)0.038 (2)0.004 (2)0.002 (2)0.003 (2)
Geometric parameters (Å, º) top
O1—C21.359 (4)C7—C81.379 (5)
O1—C8A1.387 (4)C8—C8A1.394 (5)
O2—C211.223 (4)C8—H80.9500
O7—C71.358 (5)C71—H71A0.9800
O7—C711.450 (5)C71—H71B0.9800
O3—H3A0.91 (6)C71—H71C0.9800
O4—C41.259 (5)C211—C2121.396 (5)
N2—C211.364 (5)C211—C2161.398 (5)
N2—C2111.424 (5)C212—C2131.384 (6)
N2—H20.94 (5)C212—H2120.9500
C2—C31.352 (5)C213—C2141.404 (6)
C2—C211.503 (5)C213—H2130.9500
C3—C41.452 (5)C214—C2151.392 (5)
C3—H30.9500C214—C2171.507 (6)
C4—C4A1.459 (5)C215—C2161.389 (5)
C4A—C8A1.402 (6)C215—H2150.9500
C4A—C51.410 (5)C216—H2160.9500
C5—C61.377 (6)C217—H21A0.9800
C5—H50.9500C217—H21B0.9800
C6—C71.406 (6)C217—H21C0.9800
C6—H60.9500
C2—O1—C8A118.9 (3)O2—C21—C2119.3 (3)
C7—O7—C71117.5 (3)N2—C21—C2115.0 (3)
C21—N2—C211127.1 (3)O7—C71—H71A109.5
C21—N2—H2120 (3)O7—C71—H71B109.5
C211—N2—H2113 (3)H71A—C71—H71B109.5
C3—C2—O1123.9 (4)O7—C71—H71C109.5
C3—C2—C21121.3 (3)H71A—C71—H71C109.5
O1—C2—C21114.8 (3)H71B—C71—H71C109.5
C2—C3—C4120.9 (4)C212—C211—C216119.2 (4)
C2—C3—H3119.5C212—C211—N2124.7 (4)
C4—C3—H3119.5C216—C211—N2116.1 (3)
O4—C4—C3122.6 (4)C213—C212—C211119.5 (4)
O4—C4—C4A122.6 (4)C213—C212—H212120.2
C3—C4—C4A114.8 (4)C211—C212—H212120.2
C8A—C4A—C5117.9 (4)C212—C213—C214122.0 (4)
C8A—C4A—C4120.6 (4)C212—C213—H213119.0
C5—C4A—C4121.4 (4)C214—C213—H213119.0
C6—C5—C4A119.8 (4)C215—C214—C213117.8 (4)
C6—C5—H5120.1C215—C214—C217120.6 (4)
C4A—C5—H5120.1C213—C214—C217121.7 (4)
C5—C6—C7120.6 (4)C216—C215—C214120.9 (4)
C5—C6—H6119.7C216—C215—H215119.5
C7—C6—H6119.7C214—C215—H215119.5
O7—C7—C8124.8 (4)C215—C216—C211120.6 (4)
O7—C7—C6114.1 (3)C215—C216—H216119.7
C8—C7—C6121.1 (4)C211—C216—H216119.7
C7—C8—C8A117.7 (4)C214—C217—H21A109.5
C7—C8—H8121.2C214—C217—H21B109.5
C8A—C8—H8121.2H21A—C217—H21B109.5
O1—C8A—C8116.3 (3)C214—C217—H21C109.5
O1—C8A—C4A120.9 (3)H21A—C217—H21C109.5
C8—C8A—C4A122.8 (4)H21B—C217—H21C109.5
O2—C21—N2125.6 (4)
C8A—O1—C2—C30.0 (5)C5—C4A—C8A—O1178.7 (3)
C8A—O1—C2—C21179.2 (3)C4—C4A—C8A—O12.6 (5)
O1—C2—C3—C41.9 (6)C5—C4A—C8A—C80.7 (6)
C21—C2—C3—C4177.2 (3)C4—C4A—C8A—C8177.9 (3)
C2—C3—C4—O4178.8 (4)C211—N2—C21—O23.3 (6)
C2—C3—C4—C4A1.5 (5)C211—N2—C21—C2176.3 (3)
O4—C4—C4A—C8A179.0 (4)C3—C2—C21—O212.0 (5)
C3—C4—C4A—C8A0.7 (5)O1—C2—C21—O2168.9 (3)
O4—C4—C4A—C50.5 (6)C3—C2—C21—N2168.4 (4)
C3—C4—C4A—C5179.3 (3)O1—C2—C21—N210.7 (4)
C8A—C4A—C5—C60.5 (5)C21—N2—C211—C2129.3 (6)
C4—C4A—C5—C6178.1 (4)C21—N2—C211—C216170.7 (3)
C4A—C5—C6—C70.8 (6)C216—C211—C212—C2131.1 (6)
C71—O7—C7—C80.8 (5)N2—C211—C212—C213178.9 (3)
C71—O7—C7—C6179.4 (3)C211—C212—C213—C2140.1 (6)
C5—C6—C7—O7178.3 (3)C212—C213—C214—C2150.9 (6)
C5—C6—C7—C81.9 (6)C212—C213—C214—C217179.4 (4)
O7—C7—C8—C8A178.6 (3)C213—C214—C215—C2160.9 (6)
C6—C7—C8—C8A1.6 (6)C217—C214—C215—C216179.3 (4)
C2—O1—C8A—C8178.2 (3)C214—C215—C216—C2110.0 (6)
C2—O1—C8A—C4A2.3 (5)C212—C211—C216—C2151.1 (6)
C7—C8—C8A—O1179.8 (3)N2—C211—C216—C215178.9 (3)
C7—C8—C8A—C4A0.3 (6)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N2—H2···O10.94 (5)2.28 (5)2.661 (4)103 (4)
N2—H2···O30.94 (5)2.05 (5)2.938 (4)157 (4)
O3—H3A···O4i0.91 (6)1.86 (6)2.759 (4)169 (6)
C212—H212···O20.952.312.906 (5)120
C215—H215···O2ii0.952.533.422 (6)157
C71—H71B···O2iii0.982.303.281 (5)179
Symmetry codes: (i) x+1, y1, z+1/2; (ii) x, y1, z; (iii) x+1/2, y1/2, z+1/2.
(3c) 7-Methoxy-4-oxo-N-p-tolyl-4H-chromene-2-carboxamide top
Crystal data top
C18H15NO4Z = 2
Mr = 309.31F(000) = 324
Triclinic, P1Dx = 1.453 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71075 Å
a = 5.7544 (4) ÅCell parameters from 8391 reflections
b = 8.0892 (5) Åθ = 2.6–27.5°
c = 15.6269 (14) ŵ = 0.10 mm1
α = 101.926 (7)°T = 100 K
β = 95.366 (9)°Plate, colourless
γ = 92.579 (9)°0.15 × 0.08 × 0.02 mm
V = 707.04 (9) Å3
Data collection top
Rigaku Saturn724+ (2x2 bin mode)
diffractometer
3231 independent reflections
Radiation source: Sealed Tube2462 reflections with I > 2σ(I)
Graphite Monochromator monochromatorRint = 0.034
Detector resolution: 28.5714 pixels mm-1θmax = 27.5°, θmin = 3.2°
profile data from ω–scansh = 76
Absorption correction: multi-scan
(CrystalClear-SM Expert; Rigaku, 2011)
k = 1010
Tmin = 0.985, Tmax = 0.998l = 2020
9270 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.107H atoms treated by a mixture of independent and constrained refinement
S = 1.04 w = 1/[σ2(Fo2) + (0.0633P)2]
where P = (Fo2 + 2Fc2)/3
3231 reflections(Δ/σ)max < 0.001
214 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = 0.28 e Å3
Crystal data top
C18H15NO4γ = 92.579 (9)°
Mr = 309.31V = 707.04 (9) Å3
Triclinic, P1Z = 2
a = 5.7544 (4) ÅMo Kα radiation
b = 8.0892 (5) ŵ = 0.10 mm1
c = 15.6269 (14) ÅT = 100 K
α = 101.926 (7)°0.15 × 0.08 × 0.02 mm
β = 95.366 (9)°
Data collection top
Rigaku Saturn724+ (2x2 bin mode)
diffractometer
3231 independent reflections
Absorption correction: multi-scan
(CrystalClear-SM Expert; Rigaku, 2011)
2462 reflections with I > 2σ(I)
Tmin = 0.985, Tmax = 0.998Rint = 0.034
9270 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0380 restraints
wR(F2) = 0.107H atoms treated by a mixture of independent and constrained refinement
S = 1.04Δρmax = 0.30 e Å3
3231 reflectionsΔρmin = 0.28 e Å3
214 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.55363 (13)0.10681 (10)0.33562 (5)0.0139 (2)
O20.28332 (14)0.07477 (10)0.45625 (6)0.0158 (2)
O41.16526 (14)0.40505 (10)0.38326 (6)0.0161 (2)
O70.70519 (15)0.11505 (11)0.04022 (6)0.0199 (2)
N20.47324 (17)0.29849 (12)0.55660 (7)0.0135 (2)
H20.591 (3)0.376 (2)0.5636 (11)0.036 (4)*
C20.6222 (2)0.20645 (14)0.41634 (8)0.0126 (3)
C30.8234 (2)0.30408 (14)0.43487 (8)0.0142 (3)
H30.86180.37020.49270.017*
C40.9835 (2)0.31137 (14)0.36917 (8)0.0129 (2)
C4A0.9119 (2)0.19883 (14)0.28409 (8)0.0128 (2)
C51.0474 (2)0.18605 (15)0.21300 (8)0.0159 (3)
H51.19300.25020.22050.019*
C60.9733 (2)0.08267 (15)0.13315 (8)0.0164 (3)
H61.06620.07600.08550.020*
C70.7583 (2)0.01370 (14)0.12210 (8)0.0152 (3)
C80.6189 (2)0.00433 (15)0.18998 (8)0.0149 (3)
H80.47320.06850.18210.018*
C8A0.6991 (2)0.10268 (14)0.27071 (8)0.0130 (3)
C710.5029 (2)0.23012 (16)0.02692 (9)0.0235 (3)
H71A0.48750.29780.03330.035*
H71B0.36350.16620.03630.035*
H71C0.51900.30530.06860.035*
C210.4414 (2)0.18616 (14)0.47828 (8)0.0125 (2)
C2110.3355 (2)0.31018 (14)0.62759 (8)0.0123 (2)
C2120.4144 (2)0.43129 (15)0.70350 (8)0.0152 (3)
H2120.55670.49710.70590.018*
C2130.2860 (2)0.45598 (15)0.77530 (8)0.0163 (3)
H2130.34200.53920.82630.020*
C2140.0766 (2)0.36149 (15)0.77444 (8)0.0154 (3)
C2150.0017 (2)0.23956 (15)0.69875 (8)0.0153 (3)
H2150.13960.17290.69690.018*
C2160.1270 (2)0.21230 (15)0.62581 (8)0.0144 (3)
H2160.07190.12800.57520.017*
C2170.0606 (2)0.39025 (16)0.85341 (8)0.0206 (3)
H21A0.02280.50550.88800.031*
H21B0.01970.30860.88990.031*
H21C0.22840.37530.83370.031*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0123 (4)0.0164 (4)0.0112 (4)0.0027 (3)0.0025 (3)0.0011 (3)
O20.0143 (4)0.0156 (4)0.0156 (4)0.0038 (3)0.0019 (3)0.0002 (3)
O40.0130 (4)0.0161 (4)0.0180 (5)0.0048 (3)0.0017 (3)0.0016 (3)
O70.0204 (5)0.0243 (5)0.0121 (4)0.0062 (4)0.0045 (4)0.0025 (4)
N20.0121 (5)0.0136 (5)0.0132 (5)0.0036 (4)0.0022 (4)0.0002 (4)
C20.0142 (5)0.0104 (5)0.0123 (6)0.0010 (4)0.0002 (5)0.0007 (4)
C30.0144 (6)0.0138 (6)0.0131 (6)0.0011 (5)0.0007 (5)0.0008 (5)
C40.0123 (5)0.0109 (5)0.0155 (6)0.0007 (4)0.0011 (5)0.0031 (4)
C4A0.0118 (5)0.0124 (5)0.0138 (6)0.0009 (4)0.0012 (5)0.0021 (4)
C50.0135 (6)0.0162 (6)0.0177 (6)0.0014 (5)0.0022 (5)0.0028 (5)
C60.0155 (6)0.0197 (6)0.0142 (6)0.0003 (5)0.0056 (5)0.0023 (5)
C70.0179 (6)0.0144 (6)0.0119 (6)0.0005 (5)0.0007 (5)0.0003 (5)
C80.0132 (6)0.0152 (6)0.0153 (6)0.0014 (5)0.0007 (5)0.0014 (5)
C8A0.0129 (5)0.0125 (6)0.0140 (6)0.0013 (4)0.0029 (5)0.0030 (5)
C710.0249 (7)0.0252 (7)0.0158 (6)0.0099 (6)0.0018 (5)0.0031 (5)
C210.0113 (5)0.0124 (5)0.0137 (6)0.0006 (4)0.0011 (5)0.0029 (4)
C2110.0119 (5)0.0130 (5)0.0125 (6)0.0014 (4)0.0020 (4)0.0033 (4)
C2120.0136 (6)0.0157 (6)0.0153 (6)0.0024 (5)0.0010 (5)0.0020 (5)
C2130.0181 (6)0.0174 (6)0.0118 (6)0.0003 (5)0.0003 (5)0.0006 (5)
C2140.0149 (6)0.0173 (6)0.0154 (6)0.0032 (5)0.0031 (5)0.0058 (5)
C2150.0128 (5)0.0164 (6)0.0181 (6)0.0000 (5)0.0029 (5)0.0068 (5)
C2160.0137 (5)0.0131 (5)0.0155 (6)0.0007 (4)0.0002 (5)0.0023 (4)
C2170.0195 (6)0.0255 (7)0.0174 (7)0.0014 (5)0.0055 (5)0.0042 (5)
Geometric parameters (Å, º) top
O1—C21.3619 (14)C7—C81.3804 (17)
O1—C8A1.3702 (14)C8—C8A1.3990 (16)
O2—C211.2237 (13)C8—H80.9500
O4—C41.2383 (13)C71—H71A0.9800
O7—C71.3686 (14)C71—H71B0.9800
O7—C711.4290 (13)C71—H71C0.9800
N2—C211.3567 (15)C211—C2121.3971 (16)
N2—C2111.4128 (16)C211—C2161.4022 (15)
N2—H20.885 (16)C212—C2131.3856 (17)
C2—C31.3451 (15)C212—H2120.9500
C2—C211.5116 (17)C213—C2141.3954 (16)
C3—C41.4500 (17)C213—H2130.9500
C3—H30.9500C214—C2151.3936 (17)
C4—C4A1.4594 (16)C214—C2171.5100 (17)
C4A—C8A1.3957 (15)C215—C2161.3900 (17)
C4A—C51.4051 (17)C215—H2150.9500
C5—C61.3694 (17)C216—H2160.9500
C5—H50.9500C217—H21A0.9800
C6—C71.4094 (16)C217—H21B0.9800
C6—H60.9500C217—H21C0.9800
C2—O1—C8A118.47 (9)O7—C71—H71B109.5
C7—O7—C71117.47 (9)H71A—C71—H71B109.5
C21—N2—C211127.60 (10)O7—C71—H71C109.5
C21—N2—H2116.6 (11)H71A—C71—H71C109.5
C211—N2—H2115.8 (11)H71B—C71—H71C109.5
C3—C2—O1123.13 (11)O2—C21—N2125.32 (11)
C3—C2—C21127.35 (11)O2—C21—C2120.17 (10)
O1—C2—C21109.51 (9)N2—C21—C2114.51 (10)
C2—C3—C4121.89 (11)C212—C211—C216119.02 (11)
C2—C3—H3119.1C212—C211—N2116.31 (10)
C4—C3—H3119.1C216—C211—N2124.66 (11)
O4—C4—C3123.36 (11)C213—C212—C211120.35 (10)
O4—C4—C4A122.40 (11)C213—C212—H212119.8
C3—C4—C4A114.24 (10)C211—C212—H212119.8
C8A—C4A—C5117.83 (11)C212—C213—C214121.53 (11)
C8A—C4A—C4119.81 (11)C212—C213—H213119.2
C5—C4A—C4122.33 (10)C214—C213—H213119.2
C6—C5—C4A121.15 (11)C215—C214—C213117.48 (11)
C6—C5—H5119.4C215—C214—C217121.80 (11)
C4A—C5—H5119.4C213—C214—C217120.72 (11)
C5—C6—C7119.54 (11)C216—C215—C214122.14 (11)
C5—C6—H6120.2C216—C215—H215118.9
C7—C6—H6120.2C214—C215—H215118.9
O7—C7—C8124.46 (10)C215—C216—C211119.47 (11)
O7—C7—C6114.28 (11)C215—C216—H216120.3
C8—C7—C6121.25 (11)C211—C216—H216120.3
C7—C8—C8A117.88 (10)C214—C217—H21A109.5
C7—C8—H8121.1C214—C217—H21B109.5
C8A—C8—H8121.1H21A—C217—H21B109.5
O1—C8A—C4A122.37 (10)C214—C217—H21C109.5
O1—C8A—C8115.30 (10)H21A—C217—H21C109.5
C4A—C8A—C8122.33 (11)H21B—C217—H21C109.5
O7—C71—H71A109.5
C8A—O1—C2—C31.59 (16)C5—C4A—C8A—C80.15 (18)
C8A—O1—C2—C21177.67 (9)C4—C4A—C8A—C8178.50 (11)
O1—C2—C3—C40.45 (18)C7—C8—C8A—O1179.98 (10)
C21—C2—C3—C4179.56 (10)C7—C8—C8A—C4A0.19 (18)
C2—C3—C4—O4177.00 (11)C211—N2—C21—O20.3 (2)
C2—C3—C4—C4A2.73 (17)C211—N2—C21—C2179.42 (10)
O4—C4—C4A—C8A176.64 (11)C3—C2—C21—O2169.33 (11)
C3—C4—C4A—C8A3.09 (16)O1—C2—C21—O29.88 (15)
O4—C4—C4A—C51.63 (18)C3—C2—C21—N210.40 (18)
C3—C4—C4A—C5178.64 (10)O1—C2—C21—N2170.38 (9)
C8A—C4A—C5—C60.00 (18)C21—N2—C211—C212176.18 (11)
C4—C4A—C5—C6178.30 (11)C21—N2—C211—C2165.2 (2)
C4A—C5—C6—C70.49 (19)C216—C211—C212—C2131.08 (18)
C71—O7—C7—C86.08 (18)N2—C211—C212—C213177.67 (11)
C71—O7—C7—C6173.32 (10)C211—C212—C213—C2140.23 (19)
C5—C6—C7—O7178.56 (11)C212—C213—C214—C2150.63 (18)
C5—C6—C7—C80.86 (19)C212—C213—C214—C217179.96 (11)
O7—C7—C8—C8A178.66 (11)C213—C214—C215—C2160.67 (18)
C6—C7—C8—C8A0.70 (18)C217—C214—C215—C216179.98 (11)
C2—O1—C8A—C4A1.12 (16)C214—C215—C216—C2110.16 (18)
C2—O1—C8A—C8179.05 (10)C212—C211—C216—C2151.04 (17)
C5—C4A—C8A—O1179.66 (10)N2—C211—C216—C215177.59 (10)
C4—C4A—C8A—O11.32 (17)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N2—H2···O4i0.885 (16)2.178 (16)3.0356 (12)163.0 (16)
C3—H3···O4i0.952.393.2872 (15)157
C6—H6···O7ii0.952.533.4669 (16)169
C216—H216···O20.952.292.8957 (15)121
C216—H216···O2iii0.952.513.2127 (14)131
C212—H212···O4i0.952.433.2418 (15)144
Symmetry codes: (i) x+2, y+1, z+1; (ii) x+2, y, z; (iii) x, y, z+1.

Experimental details

(1)(3a)(3c)
Crystal data
Chemical formulaC16H11NO3C18H15NO4·0.5H2OC18H15NO4
Mr265.26318.32309.31
Crystal system, space groupMonoclinic, P21/nMonoclinic, C2/cTriclinic, P1
Temperature (K)293100100
a, b, c (Å)8.6591 (12), 4.9980 (7), 28.346 (4)12.989 (12), 8.301 (7), 29.11 (2)5.7544 (4), 8.0892 (5), 15.6269 (14)
α, β, γ (°)90, 98.042 (3), 9090, 94.29 (2), 90101.926 (7), 95.366 (9), 92.579 (9)
V3)1214.7 (3)3130 (4)707.04 (9)
Z482
Radiation typeMo KαMo KαMo Kα
µ (mm1)0.100.100.10
Crystal size (mm)0.45 × 0.42 × 0.100.23 × 0.12 × 0.020.15 × 0.08 × 0.02
Data collection
DiffractometerBruker SMART 1000 CCD
diffractometer
Rigaku Saturn724+ (2x2 bin mode)
diffractometer
Rigaku Saturn724+ (2x2 bin mode)
diffractometer
Absorption correctionMulti-scan
(SADABS; Sheldrick, 1996)
Multi-scan
(CrystalClear-SM Expert; Rigaku, 2011)
Multi-scan
(CrystalClear-SM Expert; Rigaku, 2011)
Tmin, Tmax0.956, 0.9900.978, 0.9980.985, 0.998
No. of measured, independent and
observed [I > 2σ(I)] reflections
7463, 2888, 1826 11349, 2716, 2401 9270, 3231, 2462
Rint0.0290.0710.034
(sin θ/λ)max1)0.6600.5950.649
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.043, 0.125, 1.02 0.096, 0.208, 1.25 0.038, 0.107, 1.04
No. of reflections288827163231
No. of parameters185223214
H-atom treatmentH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinement
w = 1/[σ2(Fo2) + (0.0551P)2 + 0.2464P]
where P = (Fo2 + 2Fc2)/3
w = 1/[σ2(Fo2) + (0.0516P)2 + 10.5932P]
where P = (Fo2 + 2Fc2)/3
w = 1/[σ2(Fo2) + (0.0633P)2]
where P = (Fo2 + 2Fc2)/3
Δρmax, Δρmin (e Å3)0.24, 0.190.24, 0.320.30, 0.28

Computer programs: SMART (Bruker, 1997), CrystalClear-SM Expert (Rigaku, 2011), SAINT (Bruker, 1997), OSCAIL (McArdle et al., 2004) and SHELXL97 (Sheldrick, 2008), OSCAIL (McArdle et al., 2004), SHELXLE (Hübschle et al., 2011) and SHELXL97 (Sheldrick, 2008), Mercury (Macrae et al., 2006), OSCAIL (McArdle et al., 2004) and SHELXS97 (Sheldrick, 2008).

Hydrogen-bond geometry (Å, º) for (1) top
D—H···AD—HH···AD···AD—H···A
N2—H2···O2i0.84 (2)2.59 (2)3.140 (2)124 (17)
N2—H2···O4ii0.84 (2)2.50 (2)3.2690 (19)153 (18)
C3—H3···O4ii0.932.363.294 (2)179
C212—H212···O4ii0.932.613.444 (2)149
C7—H7···O2iii0.932.543.199 (2)128
Symmetry codes: (i) x, y+1, z; (ii) x+1, y+2, z+1; (iii) x+2, y, z+1.
Hydrogen-bond geometry (Å, º) for (3a) top
D—H···AD—HH···AD···AD—H···A
N2—H2···O10.94 (5)2.28 (5)2.661 (4)103 (4)
N2—H2···O30.94 (5)2.05 (5)2.938 (4)157 (4)
O3—H3A···O4i0.91 (6)1.86 (6)2.759 (4)169 (6)
C212—H212···O20.952.312.906 (5)120
C215—H215···O2ii0.952.533.422 (6)157
C71—H71B···O2iii0.982.303.281 (5)179
Symmetry codes: (i) x+1, y1, z+1/2; (ii) x, y1, z; (iii) x+1/2, y1/2, z+1/2.
Hydrogen-bond geometry (Å, º) for (3c) top
D—H···AD—HH···AD···AD—H···A
N2—H2···O4i0.885 (16)2.178 (16)3.0356 (12)163.0 (16)
C3—H3···O4i0.952.393.2872 (15)157
C6—H6···O7ii0.952.533.4669 (16)169
C216—H216···O20.952.292.8957 (15)121
C216—H216···O2iii0.952.513.2127 (14)131
C212—H212···O4i0.952.433.2418 (15)144
Symmetry codes: (i) x+2, y+1, z+1; (ii) x+2, y, z; (iii) x, y, z+1.
Selected dihedral angles top
Compoundθ1 (°)θ2 (°)θ3 (°)
(1)6.57 (7)17.67 (18))17.05 (12)
(2a)*3.71 (1)13.04 (5)10.47 (6)
(3a)4.61 (6)12.64 (8)8.22 (9)
(3b)#11.05 (6)4.27 (23)15.67 (19)
(3c)5.73 (6)9.50 (14)4.47 (16)
θ1 is the dihedral angle between the mean planes of the chromene ring and the benzene ring. θ2 is the dihedral angle between the mean planes of the chromene ring and the plane defined by atoms O2—C21—N2. θ3 is the dihedral angle between the mean planes of the benzene ring and the plane defined by the O3–C41–N3 atoms. References: (*) Reis et al. (2013); (#) Gomes et al. (2013).
 

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