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metal-organic compounds
The two L-lactate groups in diaquadi(L-lactato)nickel(II), [Ni(C3H5O3)2(H2O)2], chelate to the Ni atom through their carboxyl and hydroxy O atoms; the water molecules occupy cis positions in the coordination octahedron of the metal atom. The water molecules and hydroxy groups are engaged in hydrogen bonds, to furnish a tightly held three-dimensional network structure.
Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S160053680200956X/ya6109sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S160053680200956X/ya6109Isup2.hkl |
CCDC reference: 189862
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.010 Å
- R factor = 0.047
- wR factor = 0.113
- Data-to-parameter ratio = 8.9
checkCIF results
No syntax errors found ADDSYM reports no extra symmetry
Alert Level B:
PLAT_731 Alert B Bond Calc 0.85(5), Rep 0.850(10) .... 5.00 s.u-Ratio O3 -H3O 1.555 1.555 PLAT_731 Alert B Bond Calc 0.85(5), Rep 0.850(10) .... 5.00 s.u-Ratio O6 -H6O 1.555 1.555 PLAT_735 Alert B D-H Calc 0.85(5), Rep 0.850(10) .... 5.00 s.u-Ratio O3 -H3O 1.555 1.555 PLAT_735 Alert B D-H Calc 0.85(5), Rep 0.850(10) .... 5.00 s.u-Ratio O6 -H6O 1.555 1.555 PLAT_736 Alert B H...A Calc 1.81(6), Rep 1.810(10) .... 6.00 s.u-Ratio H3O -O4 1.555 3.456
Alert Level C:
PLAT_731 Alert C Bond Calc 0.85(4), Rep 0.850(10) .... 4.00 s.u-Ratio O1W -H1W2 1.555 1.555 PLAT_731 Alert C Bond Calc 0.85(4), Rep 0.850(10) .... 4.00 s.u-Ratio O2W -H2W1 1.555 1.555 PLAT_731 Alert C Bond Calc 0.85(4), Rep 0.850(10) .... 4.00 s.u-Ratio O2W -H2W2 1.555 1.555 PLAT_732 Alert C Angle Calc 108(6), Rep 110(2) .... 3.00 s.u-Ratio H1W1 -O1W -H1W2 1.555 1.555 1.555 PLAT_732 Alert C Angle Calc 110(6), Rep 110(2) .... 3.00 s.u-Ratio H2W1 -O2W -H2W2 1.555 1.555 1.555 PLAT_735 Alert C D-H Calc 0.85(4), Rep 0.850(10) .... 4.00 s.u-Ratio O1W -H1W1 1.555 1.555 PLAT_735 Alert C D-H Calc 0.85(4), Rep 0.850(10) .... 4.00 s.u-Ratio O1W -H1W2 1.555 1.555 PLAT_735 Alert C D-H Calc 0.85(4), Rep 0.850(10) .... 4.00 s.u-Ratio O2W -H2W2 1.555 1.555 PLAT_735 Alert C D-H Calc 0.85(4), Rep 0.850(10) .... 4.00 s.u-Ratio O2W -H2W1 1.555 1.555 PLAT_736 Alert C H...A Calc 1.92(5), Rep 1.92(2) .... 2.50 s.u-Ratio H2W2 -O2 1.555 1.455 PLAT_736 Alert C H...A Calc 1.85(5), Rep 1.85(2) .... 2.50 s.u-Ratio H2W1 -O4 1.555 2.555 General Notes
ABSTM_02 When printed, the submitted absorption T values will be replaced by the scaled T values. Since the ratio of scaled T's is identical to the ratio of reported T values, the scaling does not imply a change to the absorption corrections used in the study. Ratio of Tmax expected/reported 1.074 Tmax scaled 0.750 Tmin scaled 0.656 REFLT_03 From the CIF: _diffrn_reflns_theta_max 27.50 From the CIF: _reflns_number_total 1375 Count of symmetry unique reflns 1375 Completeness (_total/calc) 100.00% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 0 Fraction of Friedel pairs measured 0.000 Are heavy atom types Z>Si present yes WARNING: Large fraction of Friedel related reflns may be needed to determine absolute structure
0 Alert Level A = Potentially serious problem
5 Alert Level B = Potential problem
11 Alert Level C = Please check
Computing details top
Data collection: CAD-4 VAX/PC (Enraf-Nonius, 1988); cell refinement: CAD-4 VAX/PC; data reduction: NRCVAX (Gabe et al., 1989); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97.
Bis(L-lactato)diaquanickel(II) top
Crystal data top
[Ni(C3H5O3)2(H2O)2] | Dx = 1.773 Mg m−3 |
Mr = 272.88 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, P212121 | Cell parameters from 25 reflections |
a = 6.033 (1) Å | θ = 12.0–15.0° |
b = 11.805 (1) Å | µ = 1.92 mm−1 |
c = 14.354 (1) Å | T = 298 K |
V = 1022.3 (2) Å3 | Block, green |
Z = 4 | 0.30 × 0.19 × 0.15 mm |
F(000) = 568 |
Data collection top
Enraf-Nonius CAD-4 diffractometer | 1138 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.000 |
Graphite monochromator | θmax = 27.5°, θmin = 2.2° |
ω scans | h = 0→7 |
Absorption correction: empirical (using intensity measurements) via ψ scan (North et al., 1968) | k = 0→15 |
Tmin = 0.611, Tmax = 0.698 | l = 0→18 |
1375 measured reflections | 3 standard reflections every 60 min |
1375 independent reflections | intensity decay: none |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.047 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.113 | w = 1/[σ2(Fo2) + (0.0602P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max = 0.001 |
1375 reflections | Δρmax = 0.78 e Å−3 |
154 parameters | Δρmin = −0.57 e Å−3 |
8 restraints | Absolute structure: Flack & Schwarzenbach (1988); no Friedel pairs, still the absolute configuration is in agreement with known L-lactate. |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.00 (4) |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.2107 (1) | 0.14551 (7) | 0.64264 (5) | 0.0184 (2) | |
O1 | 0.5193 (7) | 0.1637 (4) | 0.7046 (3) | 0.025 (1) | |
O2 | 0.7150 (9) | 0.2833 (4) | 0.7907 (3) | 0.032 (1) | |
O3 | 0.2359 (8) | 0.3156 (4) | 0.6510 (3) | 0.028 (1) | |
O4 | 0.417 (1) | 0.0376 (4) | 0.3896 (3) | 0.039 (1) | |
O5 | 0.3460 (8) | 0.1432 (4) | 0.5135 (3) | 0.025 (1) | |
O6 | 0.224 (1) | −0.0247 (3) | 0.6161 (3) | 0.025 (1) | |
O1w | −0.0997 (8) | 0.1530 (5) | 0.5804 (3) | 0.027 (1) | |
O2w | 0.0622 (8) | 0.1366 (5) | 0.7694 (3) | 0.029 (1) | |
C1 | 0.549 (1) | 0.2612 (6) | 0.7396 (5) | 0.024 (1) | |
C2 | 0.387 (1) | 0.3555 (6) | 0.7204 (5) | 0.027 (1) | |
C3 | 0.268 (1) | 0.3949 (6) | 0.8085 (5) | 0.035 (2) | |
C4 | 0.348 (1) | 0.0497 (5) | 0.4714 (4) | 0.022 (1) | |
C5 | 0.265 (1) | −0.0550 (5) | 0.5215 (4) | 0.026 (2) | |
C6 | 0.055 (2) | −0.1029 (8) | 0.4746 (6) | 0.051 (2) | |
H3o | 0.129 (8) | 0.360 (5) | 0.639 (5) | 0.033* | |
H6o | 0.20 (1) | −0.073 (4) | 0.659 (3) | 0.030* | |
H1w1 | −0.221 (6) | 0.140 (5) | 0.608 (4) | 0.033* | |
H1w2 | −0.11 (1) | 0.217 (3) | 0.553 (4) | 0.033* | |
H2w1 | 0.06 (1) | 0.077 (3) | 0.802 (4) | 0.035* | |
H2w2 | −0.062 (6) | 0.170 (5) | 0.772 (5) | 0.035* | |
H2 | 0.4693 | 0.4199 | 0.6945 | 0.032* | |
H3a | 0.1672 | 0.4550 | 0.7931 | 0.052* | |
H3b | 0.3750 | 0.4219 | 0.8528 | 0.052* | |
H3c | 0.1872 | 0.3327 | 0.8349 | 0.052* | |
H5 | 0.3808 | −0.1130 | 0.5199 | 0.032* | |
H6a | 0.0058 | −0.1690 | 0.5077 | 0.076* | |
H6b | 0.0874 | −0.1228 | 0.4112 | 0.076* | |
H6c | −0.0604 | −0.0466 | 0.4756 | 0.076* |
Atomic displacement parameters (Å2) top
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.0198 (4) | 0.0180 (3) | 0.0175 (3) | 0.0008 (4) | 0.0011 (4) | 0.0004 (4) |
O1 | 0.022 (2) | 0.021 (2) | 0.032 (2) | 0.002 (2) | 0.002 (2) | −0.010 (2) |
O2 | 0.027 (2) | 0.028 (2) | 0.041 (3) | 0.001 (2) | −0.007 (3) | −0.010 (2) |
O3 | 0.033 (3) | 0.023 (2) | 0.027 (2) | 0.007 (2) | −0.004 (3) | −0.004 (2) |
O4 | 0.060 (4) | 0.033 (3) | 0.024 (2) | −0.015 (3) | 0.018 (3) | −0.009 (2) |
O5 | 0.032 (3) | 0.020 (2) | 0.024 (2) | 0.000 (2) | 0.008 (2) | −0.002 (2) |
O6 | 0.039 (3) | 0.020 (2) | 0.017 (2) | 0.002 (3) | 0.006 (2) | 0.003 (2) |
O1w | 0.027 (3) | 0.030 (3) | 0.024 (2) | 0.004 (3) | −0.002 (2) | 0.008 (2) |
O2w | 0.034 (3) | 0.028 (3) | 0.026 (2) | 0.006 (3) | 0.005 (2) | 0.012 (2) |
C1 | 0.019 (3) | 0.024 (3) | 0.030 (3) | 0.004 (3) | 0.003 (3) | −0.004 (3) |
C2 | 0.027 (3) | 0.019 (3) | 0.034 (3) | −0.001 (3) | 0.000 (3) | −0.001 (3) |
C3 | 0.024 (4) | 0.035 (4) | 0.045 (4) | 0.006 (3) | −0.001 (3) | −0.019 (3) |
C4 | 0.023 (4) | 0.020 (3) | 0.023 (3) | −0.001 (3) | −0.001 (3) | −0.004 (3) |
C5 | 0.037 (4) | 0.020 (3) | 0.022 (3) | 0.005 (3) | 0.003 (3) | 0.001 (2) |
C6 | 0.062 (6) | 0.054 (5) | 0.037 (4) | −0.036 (5) | 0.001 (5) | −0.003 (4) |
Geometric parameters (Å, º) top
Ni1—O1 | 2.075 (5) | C5—C6 | 1.54 (1) |
Ni1—O3 | 2.017 (4) | O3—H3o | 0.85 (1) |
Ni1—O5 | 2.025 (4) | O6—H6o | 0.85 (1) |
Ni1—O6 | 2.046 (4) | O1w—H1w1 | 0.85 (1) |
Ni1—O1w | 2.077 (5) | O1w—H1w2 | 0.85 (1) |
Ni1—O2w | 2.031 (4) | O2w—H2w1 | 0.85 (1) |
O1—C1 | 1.269 (8) | O2w—H2w2 | 0.85 (1) |
O2—C1 | 1.267 (8) | C2—H2 | 0.9800 |
O3—C2 | 1.431 (8) | C3—H3a | 0.9600 |
O4—C4 | 1.254 (8) | C3—H3b | 0.9600 |
O5—C4 | 1.257 (7) | C3—H3c | 0.9600 |
O6—C5 | 1.427 (7) | C5—H5 | 0.9800 |
C1—C2 | 1.506 (9) | C6—H6a | 0.9600 |
C2—C3 | 1.527 (9) | C6—H6b | 0.9600 |
C4—C5 | 1.516 (8) | C6—H6c | 0.9600 |
O1—Ni1—O3 | 78.7 (2) | C4—C5—C6 | 111.4 (6) |
O1—Ni1—O5 | 91.8 (2) | C2—O3—H3o | 115 (5) |
O1—Ni1—O6 | 98.5 (2) | Ni1—O3—H3o | 123 (5) |
O1—Ni1—O1w | 171.6 (2) | C5—O6—H6o | 123 (5) |
O1—Ni1—O2w | 91.0 (2) | Ni1—O6—H6o | 121 (5) |
O3—Ni1—O5 | 92.2 (2) | Ni1—O1w—H1w1 | 125 (5) |
O3—Ni1—O6 | 170.3 (2) | Ni1—O1w—H1w2 | 106 (5) |
O3—Ni1—O1w | 92.9 (2) | H1w1—O1w—H1w2 | 110 (2) |
O3—Ni1—O2w | 91.8 (2) | Ni1—O2w—H2w1 | 123 (4) |
O5—Ni1—O6 | 78.5 (2) | Ni1—O2w—H2w2 | 114 (5) |
O5—Ni1—O1w | 88.3 (2) | H2w1—O2w—H2w2 | 110 (2) |
O5—Ni1—O2w | 175.5 (2) | O3—C2—H2 | 108.3 |
O6—Ni1—O1w | 89.7 (2) | C1—C2—H2 | 108.3 |
O6—Ni1—O2w | 97.6 (2) | C3—C2—H2 | 108.3 |
O1w—Ni1—O2w | 89.4 (2) | C2—C3—H3a | 109.5 |
C1—O1—Ni1 | 113.0 (4) | C2—C3—H3b | 109.5 |
C2—O3—Ni1 | 114.7 (4) | H3a—C3—H3b | 109.5 |
C4—O5—Ni1 | 117.1 (4) | C2—C3—H3c | 109.5 |
C5—O6—Ni1 | 115.5 (3) | H3a—C3—H3c | 109.5 |
O1—C1—O2 | 121.9 (6) | H3b—C3—H3c | 109.5 |
O1—C1—C2 | 120.3 (6) | O6—C5—H5 | 108.8 |
O2—C1—C2 | 117.8 (6) | C4—C5—H5 | 108.8 |
O3—C2—C1 | 107.4 (6) | C6—C5—H5 | 108.8 |
O3—C2—C3 | 112.1 (6) | C5—C6—H6a | 109.5 |
C1—C2—C3 | 112.3 (6) | C5—C6—H6b | 109.5 |
O4—C4—O5 | 123.7 (6) | H6a—C6—H6b | 109.5 |
O4—C4—C5 | 117.4 (5) | C5—C6—H6c | 109.5 |
O5—C4—C5 | 119.0 (5) | H6a—C6—H6c | 109.5 |
O6—C5—C4 | 107.7 (5) | H6b—C6—H6c | 109.5 |
O6—C5—C6 | 111.4 (6) | ||
O3—Ni1—O1—C1 | 17.6 (5) | Ni1—O1—C1—O2 | 170.7 (5) |
O5—Ni1—O1—C1 | 109.4 (5) | Ni1—O1—C1—C2 | −10.1 (8) |
O2w—Ni1—O1—C1 | −74.1 (5) | Ni1—O3—C2—C1 | 22.7 (6) |
O6—Ni1—O1—C1 | −171.9 (5) | Ni1—O3—C2—C3 | −101.0 (6) |
O5—Ni1—O3—C2 | −113.9 (4) | O1—C1—C2—O3 | −7.9 (9) |
O2w—Ni1—O3—C2 | 68.2 (4) | O2—C1—C2—O3 | 171.4 (6) |
O1—Ni1—O3—C2 | −22.5 (4) | O1—C1—C2—C3 | 115.8 (7) |
O1w—Ni1—O3—C2 | 157.7 (4) | O2—C1—C2—C3 | −65.0 (8) |
O3—Ni1—O5—C4 | −173.4 (5) | Ni1—O5—C4—O4 | 176.3 (6) |
O6—Ni1—O5—C4 | 9.6 (5) | Ni1—O5—C4—C5 | −3.9 (8) |
O1—Ni1—O5—C4 | 107.9 (5) | Ni1—O6—C5—C4 | 14.9 (7) |
O1w—Ni1—O5—C4 | −80.5 (5) | Ni1—O6—C5—C6 | −107.5 (6) |
O5—Ni1—O6—C5 | −13.7 (5) | O4—C4—C5—O6 | 172.5 (7) |
O2w—Ni1—O6—C5 | 164.0 (5) | O5—C4—C5—O6 | −7.3 (9) |
O1—Ni1—O6—C5 | −103.9 (5) | O4—C4—C5—C6 | −65.1 (9) |
O1w—Ni1—O6—C5 | 74.6 (5) | O5—C4—C5—C6 | 115.1 (7) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1w—H1w1···O1i | 0.85 (1) | 2.11 (3) | 2.911 (6) | 158 (7) |
O1w—H1w2···O5ii | 0.85 (1) | 1.93 (2) | 2.778 (7) | 174 (7) |
O2w—H2w2···O2i | 0.85 (1) | 1.92 (2) | 2.735 (7) | 162 (7) |
O2w—H2w1···O4iii | 0.85 (1) | 1.85 (2) | 2.687 (7) | 170 (7) |
O3—H3o···O4ii | 0.85 (1) | 1.81 (1) | 2.657 (7) | 176 (8) |
O6—H6o···O2iv | 0.85 (1) | 1.91 (4) | 2.658 (6) | 147 (7) |
Symmetry codes: (i) x−1, y, z; (ii) x−1/2, −y+1/2, −z+1; (iii) −x+1/2, −y, z+1/2; (iv) −x+1, y−1/2, −z+3/2. |
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