Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807055912/xu2357sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807055912/xu2357Isup2.hkl |
CCDC reference: 672857
Key indicators
- Single-crystal X-ray study
- T = 292 K
- Mean (C-C) = 0.008 Å
- R factor = 0.076
- wR factor = 0.220
- Data-to-parameter ratio = 12.9
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT026_ALERT_3_B Ratio Observed / Unique Reflections too Low .... 37 Perc.
Alert level C PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 8
Alert level G PLAT793_ALERT_1_G Check the Absolute Configuration of C5 = ... S PLAT793_ALERT_1_G Check the Absolute Configuration of C6 = ... R
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 1 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
For general background, see: Basavaiah et al. (1996) check date – 2003 in list; Elier et al. (1956). For related structures, see: Langner et al. (2005); Desimoni et al. (2006).
To a mixture of anhydrous cyclopentanone (1 ml) and toluene (3 ml) was added the 3-(2-nitrophenyl)-2-oxopropanoic acid (0.5 mmol) and L-N-(pyridin-2-yl)pyrrolidine-2-carboxamide (2 mmol) and the resulting mixture was stirred at 273 K for 12 h. The reaction mixture was treated with CH2N2 solution in ether for 20 min. After removal of solvent, the residue was purified through flash column chromatography on a silica gel to give the title compound. Colourless single crystals suitable for X-ray diffraction were obtained by recrystallization from an ethanol solution.
H atoms were placed in calculated positions with C–H = 0.93–0.98 Å and O—H = 0.82 Å, and refined using a riding model with Uiso(H) =1.2Ueq(C,O).
Data collection: DIFRAC (Gabe et al., 1993); cell refinement: DIFRAC (Gabe et al., 1993); data reduction: NRCVAX (Gabe et al., 1989); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia,1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).
Fig. 1. The molecular structure of (I) with 30% probability displacement ellipsoids (arbitrary spheres for H atoms). |
C15H17NO6 | F(000) = 648 |
Mr = 307.30 | Dx = 1.397 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 19 reflections |
a = 14.556 (4) Å | θ = 5.0–9.3° |
b = 5.540 (2) Å | µ = 0.11 mm−1 |
c = 18.194 (6) Å | T = 292 K |
β = 95.12 (3)° | Block, colourless |
V = 1461.3 (8) Å3 | 0.25 × 0.22 × 0.05 mm |
Z = 4 |
Enraf–Nonius CAD-4 diffractometer | Rint = 0.010 |
Radiation source: fine-focus sealed tube | θmax = 25.1°, θmin = 1.4° |
Graphite monochromator | h = −17→17 |
ω/2θ scan | k = 0→6 |
2595 measured reflections | l = −4→21 |
2591 independent reflections | 3 standard reflections every 300 reflections |
949 reflections with I > 2σ(I) | intensity decay: 4.8% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.076 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.220 | H-atom parameters constrained |
S = 0.91 | w = 1/[σ2(Fo2) + (0.107P)2] where P = (Fo2 + 2Fc2)/3 |
2591 reflections | (Δ/σ)max = 0.001 |
201 parameters | Δρmax = 0.34 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C15H17NO6 | V = 1461.3 (8) Å3 |
Mr = 307.30 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.556 (4) Å | µ = 0.11 mm−1 |
b = 5.540 (2) Å | T = 292 K |
c = 18.194 (6) Å | 0.25 × 0.22 × 0.05 mm |
β = 95.12 (3)° |
Enraf–Nonius CAD-4 diffractometer | Rint = 0.010 |
2595 measured reflections | 3 standard reflections every 300 reflections |
2591 independent reflections | intensity decay: 4.8% |
949 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.076 | 0 restraints |
wR(F2) = 0.220 | H-atom parameters constrained |
S = 0.91 | Δρmax = 0.34 e Å−3 |
2591 reflections | Δρmin = −0.29 e Å−3 |
201 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.0421 (3) | 0.2211 (8) | 0.2122 (3) | 0.0735 (15) | |
O2 | 0.1788 (3) | 0.1796 (7) | 0.0950 (2) | 0.0445 (10) | |
H2 | 0.2285 | 0.2059 | 0.0785 | 0.053* | |
O3 | 0.2303 (2) | −0.0964 (6) | 0.27028 (19) | 0.0421 (10) | |
O4 | 0.2620 (3) | 0.2696 (7) | 0.2269 (2) | 0.0583 (12) | |
O5 | 0.3485 (4) | 0.3703 (9) | 0.0026 (3) | 0.0834 (16) | |
O6 | 0.2893 (3) | 0.0276 (9) | −0.0299 (2) | 0.0691 (14) | |
N1 | 0.3379 (4) | 0.1526 (11) | 0.0124 (3) | 0.0549 (14) | |
C1 | 0.0238 (4) | 0.0522 (11) | 0.1718 (3) | 0.0456 (15) | |
C2 | −0.0695 (4) | −0.0067 (12) | 0.1355 (3) | 0.0541 (17) | |
H2A | −0.0909 | 0.1195 | 0.1012 | 0.065* | |
H2B | −0.1137 | −0.0252 | 0.1720 | 0.065* | |
C3 | −0.0574 (4) | −0.2430 (12) | 0.0950 (3) | 0.0548 (17) | |
H3A | −0.0713 | −0.3797 | 0.1254 | 0.066* | |
H3B | −0.0973 | −0.2487 | 0.0494 | 0.066* | |
C4 | 0.0428 (4) | −0.2444 (11) | 0.0796 (3) | 0.0471 (15) | |
H4A | 0.0523 | −0.1489 | 0.0363 | 0.056* | |
H4B | 0.0643 | −0.4077 | 0.0723 | 0.056* | |
C5 | 0.0921 (3) | −0.1321 (10) | 0.1492 (3) | 0.0392 (14) | |
H5 | 0.0981 | −0.2572 | 0.1874 | 0.047* | |
C6 | 0.1875 (4) | −0.0227 (9) | 0.1435 (3) | 0.0365 (13) | |
C7 | 0.2303 (4) | 0.0695 (10) | 0.2176 (3) | 0.0379 (13) | |
C8 | 0.2536 (4) | −0.2062 (10) | 0.1124 (3) | 0.0400 (14) | |
H8A | 0.2485 | −0.3581 | 0.1382 | 0.048* | |
H8B | 0.2334 | −0.2342 | 0.0608 | 0.048* | |
C9 | 0.3530 (4) | −0.1341 (10) | 0.1178 (3) | 0.0362 (13) | |
C10 | 0.4123 (4) | −0.2346 (10) | 0.1729 (3) | 0.0412 (14) | |
H10 | 0.3888 | −0.3479 | 0.2039 | 0.049* | |
C11 | 0.5037 (4) | −0.1768 (12) | 0.1844 (3) | 0.0558 (17) | |
H11 | 0.5413 | −0.2555 | 0.2208 | 0.067* | |
C12 | 0.5397 (4) | −0.0019 (12) | 0.1417 (3) | 0.0517 (17) | |
H12 | 0.6016 | 0.0408 | 0.1497 | 0.062* | |
C13 | 0.4844 (4) | 0.1078 (11) | 0.0880 (3) | 0.0509 (17) | |
H13 | 0.5083 | 0.2277 | 0.0595 | 0.061* | |
C14 | 0.3933 (4) | 0.0434 (10) | 0.0753 (3) | 0.0414 (14) | |
C15 | 0.2697 (4) | −0.0246 (11) | 0.3430 (3) | 0.0530 (17) | |
H15A | 0.3355 | −0.0110 | 0.3429 | 0.064* | |
H15B | 0.2553 | −0.1437 | 0.3785 | 0.064* | |
H15C | 0.2445 | 0.1284 | 0.3557 | 0.064* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.078 (3) | 0.058 (3) | 0.087 (4) | −0.003 (3) | 0.021 (3) | −0.036 (3) |
O2 | 0.052 (2) | 0.035 (2) | 0.048 (2) | 0.002 (2) | 0.0130 (19) | 0.0112 (19) |
O3 | 0.061 (3) | 0.026 (2) | 0.039 (2) | −0.0021 (19) | −0.0014 (17) | 0.0054 (18) |
O4 | 0.081 (3) | 0.035 (3) | 0.056 (3) | −0.010 (2) | −0.008 (2) | −0.003 (2) |
O5 | 0.132 (5) | 0.052 (3) | 0.066 (3) | −0.001 (3) | 0.008 (3) | 0.020 (3) |
O6 | 0.075 (3) | 0.087 (4) | 0.044 (3) | −0.005 (3) | −0.003 (2) | −0.004 (3) |
N1 | 0.073 (4) | 0.051 (4) | 0.043 (3) | 0.009 (3) | 0.017 (3) | 0.007 (3) |
C1 | 0.051 (4) | 0.038 (4) | 0.049 (4) | 0.005 (3) | 0.011 (3) | −0.001 (3) |
C2 | 0.047 (4) | 0.064 (5) | 0.050 (4) | 0.011 (3) | 0.004 (3) | 0.002 (3) |
C3 | 0.041 (4) | 0.066 (4) | 0.056 (4) | −0.004 (3) | −0.003 (3) | −0.001 (3) |
C4 | 0.050 (4) | 0.041 (4) | 0.049 (3) | −0.003 (3) | −0.001 (3) | −0.005 (3) |
C5 | 0.037 (3) | 0.047 (4) | 0.033 (3) | −0.003 (3) | 0.000 (2) | 0.004 (3) |
C6 | 0.049 (3) | 0.031 (3) | 0.030 (3) | 0.007 (3) | 0.006 (2) | 0.005 (3) |
C7 | 0.039 (3) | 0.023 (3) | 0.052 (4) | −0.001 (3) | 0.007 (3) | −0.005 (3) |
C8 | 0.053 (4) | 0.028 (3) | 0.040 (3) | 0.003 (3) | 0.008 (3) | −0.004 (3) |
C9 | 0.040 (3) | 0.033 (3) | 0.036 (3) | 0.003 (3) | 0.004 (2) | −0.007 (3) |
C10 | 0.041 (3) | 0.032 (3) | 0.050 (3) | 0.004 (3) | 0.001 (3) | 0.001 (3) |
C11 | 0.058 (4) | 0.052 (4) | 0.056 (4) | 0.004 (4) | −0.001 (3) | 0.003 (3) |
C12 | 0.038 (3) | 0.062 (4) | 0.053 (4) | −0.005 (3) | −0.003 (3) | −0.017 (4) |
C13 | 0.058 (4) | 0.049 (4) | 0.048 (4) | −0.020 (3) | 0.019 (3) | −0.012 (3) |
C14 | 0.051 (4) | 0.039 (4) | 0.035 (3) | 0.007 (3) | 0.010 (3) | −0.008 (3) |
C15 | 0.057 (4) | 0.063 (4) | 0.037 (3) | −0.001 (3) | −0.002 (3) | 0.009 (3) |
O1—C1 | 1.205 (7) | C5—C6 | 1.527 (7) |
O2—C6 | 1.426 (6) | C5—H5 | 0.9800 |
O2—H2 | 0.8200 | C6—C7 | 1.521 (7) |
O3—C7 | 1.329 (6) | C6—C8 | 1.542 (7) |
O3—C15 | 1.449 (6) | C8—C9 | 1.496 (7) |
O4—C7 | 1.206 (6) | C8—H8A | 0.9700 |
O5—N1 | 1.230 (6) | C8—H8B | 0.9700 |
O6—N1 | 1.214 (6) | C9—C10 | 1.380 (7) |
N1—C14 | 1.470 (7) | C9—C14 | 1.410 (7) |
C1—C2 | 1.492 (8) | C10—C11 | 1.365 (8) |
C1—C5 | 1.508 (8) | C10—H10 | 0.9300 |
C2—C3 | 1.520 (8) | C11—C12 | 1.374 (8) |
C2—H2A | 0.9700 | C11—H11 | 0.9300 |
C2—H2B | 0.9700 | C12—C13 | 1.353 (8) |
C3—C4 | 1.509 (7) | C12—H12 | 0.9300 |
C3—H3A | 0.9700 | C13—C14 | 1.373 (7) |
C3—H3B | 0.9700 | C13—H13 | 0.9300 |
C4—C5 | 1.530 (7) | C15—H15A | 0.9600 |
C4—H4A | 0.9700 | C15—H15B | 0.9600 |
C4—H4B | 0.9700 | C15—H15C | 0.9600 |
C6—O2—H2 | 109.5 | C7—C6—C8 | 109.1 (4) |
C7—O3—C15 | 116.3 (4) | C5—C6—C8 | 111.3 (4) |
O6—N1—O5 | 122.7 (6) | O4—C7—O3 | 124.0 (5) |
O6—N1—C14 | 120.4 (6) | O4—C7—C6 | 123.7 (5) |
O5—N1—C14 | 116.7 (6) | O3—C7—C6 | 112.4 (4) |
O1—C1—C2 | 125.7 (5) | C9—C8—C6 | 115.5 (4) |
O1—C1—C5 | 125.2 (5) | C9—C8—H8A | 108.4 |
C2—C1—C5 | 109.1 (5) | C6—C8—H8A | 108.4 |
C1—C2—C3 | 105.2 (5) | C9—C8—H8B | 108.4 |
C1—C2—H2A | 110.7 | C6—C8—H8B | 108.4 |
C3—C2—H2A | 110.7 | H8A—C8—H8B | 107.5 |
C1—C2—H2B | 110.7 | C10—C9—C14 | 114.6 (5) |
C3—C2—H2B | 110.7 | C10—C9—C8 | 118.6 (5) |
H2A—C2—H2B | 108.8 | C14—C9—C8 | 126.6 (5) |
C4—C3—C2 | 104.5 (5) | C11—C10—C9 | 123.6 (6) |
C4—C3—H3A | 110.9 | C11—C10—H10 | 118.2 |
C2—C3—H3A | 110.9 | C9—C10—H10 | 118.2 |
C4—C3—H3B | 110.9 | C10—C11—C12 | 119.6 (6) |
C2—C3—H3B | 110.9 | C10—C11—H11 | 120.2 |
H3A—C3—H3B | 108.9 | C12—C11—H11 | 120.2 |
C3—C4—C5 | 103.6 (4) | C13—C12—C11 | 119.5 (5) |
C3—C4—H4A | 111.0 | C13—C12—H12 | 120.3 |
C5—C4—H4A | 111.0 | C11—C12—H12 | 120.3 |
C3—C4—H4B | 111.0 | C12—C13—C14 | 120.6 (6) |
C5—C4—H4B | 111.0 | C12—C13—H13 | 119.7 |
H4A—C4—H4B | 109.0 | C14—C13—H13 | 119.7 |
C1—C5—C6 | 112.1 (5) | C13—C14—C9 | 122.1 (5) |
C1—C5—C4 | 103.2 (4) | C13—C14—N1 | 118.6 (5) |
C6—C5—C4 | 117.9 (4) | C9—C14—N1 | 119.2 (5) |
C1—C5—H5 | 107.7 | O3—C15—H15A | 109.5 |
C6—C5—H5 | 107.7 | O3—C15—H15B | 109.5 |
C4—C5—H5 | 107.7 | H15A—C15—H15B | 109.5 |
O2—C6—C7 | 107.0 (4) | O3—C15—H15C | 109.5 |
O2—C6—C5 | 108.8 (4) | H15A—C15—H15C | 109.5 |
C7—C6—C5 | 112.1 (4) | H15B—C15—H15C | 109.5 |
O2—C6—C8 | 108.3 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O5 | 0.82 | 2.49 | 3.283 (7) | 162 |
O2—H2···O6 | 0.82 | 2.45 | 3.018 (5) | 127 |
Experimental details
Crystal data | |
Chemical formula | C15H17NO6 |
Mr | 307.30 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 292 |
a, b, c (Å) | 14.556 (4), 5.540 (2), 18.194 (6) |
β (°) | 95.12 (3) |
V (Å3) | 1461.3 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.25 × 0.22 × 0.05 |
Data collection | |
Diffractometer | Enraf–Nonius CAD-4 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2595, 2591, 949 |
Rint | 0.010 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.076, 0.220, 0.91 |
No. of reflections | 2591 |
No. of parameters | 201 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.34, −0.29 |
Computer programs: DIFRAC (Gabe et al., 1993), NRCVAX (Gabe et al., 1989), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia,1997).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···O5 | 0.82 | 2.49 | 3.283 (7) | 162 |
O2—H2···O6 | 0.82 | 2.45 | 3.018 (5) | 127 |
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α-Hydroxy ester can be transferred to a large variety of important product. The title compound is a very important intermediate for the construction of α,β-unsaturated carbonyl compound, which has broad utility in organic synthesis (Basavaiah et al., 1996; Elier et al., 1956). Its crystal structure is reported here.
The molecular structure is shown in Fig. 1. Bond lengths and angles are normal. The C15-containing ester shows an extended planar conformation and makes a dihedral angle of 49.8 (2)° with the benzene plane, The nitro group is not coplanar with attached benzene ring and tilted with respect to the benzene ring with a angle of 44.1 (3)°. Intramolecular O—H···O hydrogen bonding is observed in the structure (Table 1).