Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536804017908/ww6246sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536804017908/ww6246Isup2.hkl |
CCDC reference: 244301
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.002 Å
- H-atom completeness 78%
- R factor = 0.018
- wR factor = 0.047
- Data-to-parameter ratio = 11.5
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT041_ALERT_1_C Calc. and Rep. SumFormula Strings Differ .... ? PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT068_ALERT_1_C Reported F000 Differs from Calcd (or Missing)... ? PLAT125_ALERT_4_C No _symmetry_space_group_name_Hall Given ....... ? PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ? PLAT164_ALERT_4_C Nr. of Refined C-H H-Atoms in Heavy-At Struct... 4 PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.82 Ratio PLAT710_ALERT_4_C Delete 1-2-3 or 2-3-4 Linear Torsion Angle ... # 18 O5 -MN1 -O3 -C4 22.70 0.50 1.555 1.555 1.555 1.555
Alert level G FORMU01_ALERT_2_G There is a discrepancy between the atom counts in the _chemical_formula_sum and the formula from the _atom_site* data. Atom count from _chemical_formula_sum:C4 H9 Mn1 N1 O6 Atom count from the _atom_site data: C4 H7 Mn1 N1 O6 CELLZ01_ALERT_1_G Difference between formula and atom_site contents detected. CELLZ01_ALERT_1_G WARNING: H atoms missing from atom site list. Is this intentional? From the CIF: _cell_formula_units_Z 4 From the CIF: _chemical_formula_sum C4 H9 Mn N O6 TEST: Compare cell contents of formula and atom_site data atom Z*formula cif sites diff C 16.00 16.00 0.00 H 36.00 28.00 8.00 Mn 4.00 4.00 0.00 N 4.00 4.00 0.00 O 24.00 24.00 0.00 REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 27.47 From the CIF: _reflns_number_total 1536 Count of symmetry unique reflns 918 Completeness (_total/calc) 167.32% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 618 Fraction of Friedel pairs measured 0.673 Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 8 ALERT level C = Check and explain 4 ALERT level G = General alerts; check 6 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 4 ALERT type 4 Improvement, methodology, query or suggestion
checkCIF publication errors
Alert level A PUBL002_ALERT_1_A The contact author's address is missing, _publ_contact_author_address. PUBL006_ALERT_1_A _publ_requested_journal is missing e.g. 'Acta Crystallographica Section C'
2 ALERT level A = Data missing that is essential or data in wrong format 0 ALERT level G = General alerts. Data that may be required is missing
Data collection: SMART (Siemens, 1996); cell refinement: SMART; data reduction: SAINT (Siemens, 1994); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Siemens, 1994); software used to prepare material for publication: SHELXL97.
[Mn(C4H5NO4)(H2O)2] | Dx = 1.953 Mg m−3 |
Mr = 222.06 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pca21 | Cell parameters from 2942 reflections |
a = 14.535 (3) Å | θ = 2.1–27.5° |
b = 5.340 (1) Å | µ = 1.74 mm−1 |
c = 9.731 (2) Å | T = 293 K |
V = 755.3 (2) Å3 | Prism, colorless |
Z = 4 | 0.37 × 0.23 × 0.10 mm |
F(000) = 452 |
Siemens SMART CCD diffractometer | 1536 independent reflections |
Radiation source: fine-focus sealed tube | 1502 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.016 |
Detector resolution: 14.6306 pixels mm-1 | θmax = 27.5°, θmin = 4.1° |
ω scans | h = −18→18 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | k = −6→6 |
Tmin = 0.557, Tmax = 0.840 | l = −12→9 |
5189 measured reflections |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.018 | w = 1/[σ2(Fo2) + (0.0337P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.047 | (Δ/σ)max = 0.018 |
S = 1.04 | Δρmax = 0.44 e Å−3 |
1536 reflections | Δρmin = −0.24 e Å−3 |
134 parameters | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
1 restraint | Extinction coefficient: 0.0011 (3) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983) |
Secondary atom site location: difference Fourier map | Absolute structure parameter: 0.006 (13) |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.31825 (9) | 0.2521 (2) | 0.78326 (14) | 0.0094 (2) | |
H2A | 0.2934 | 0.3953 | 0.7487 | 0.011* | |
Mn1 | 0.44157 (1) | 0.13867 (3) | 0.65367 (3) | 0.00853 (10) | |
O1 | 0.46352 (8) | −0.0224 (2) | 0.86724 (12) | 0.0135 (2) | |
O2 | 0.45355 (8) | 0.1077 (2) | 1.08483 (14) | 0.0114 (3) | |
O3 | 0.34148 (9) | −0.14611 (19) | 0.60608 (13) | 0.0132 (3) | |
O4 | 0.21192 (7) | −0.33082 (18) | 0.67006 (15) | 0.0163 (3) | |
O5 | 0.53912 (7) | 0.4368 (2) | 0.72600 (12) | 0.0125 (2) | |
O6 | 0.39757 (8) | 0.4047 (2) | 0.49653 (12) | 0.0145 (3) | |
C1 | 0.35497 (11) | 0.3014 (3) | 0.92158 (17) | 0.0112 (3) | |
C2 | 0.42944 (11) | 0.1124 (3) | 0.9590 (2) | 0.0096 (3) | |
C3 | 0.24880 (11) | 0.0512 (3) | 0.78042 (18) | 0.0136 (3) | |
H3B | 0.189 (2) | 0.110 (4) | 0.761 (3) | 0.031 (7)* | |
H3A | 0.2456 (16) | −0.029 (4) | 0.871 (2) | 0.019 (5)* | |
C4 | 0.26885 (11) | −0.1554 (2) | 0.67699 (17) | 0.0110 (3) | |
H1B | 0.3120 (18) | 0.290 (5) | 0.985 (3) | 0.021 (5)* | |
H1A | 0.3843 (15) | 0.474 (4) | 0.923 (2) | 0.016 (5)* | |
H6A | 0.4292 (19) | 0.443 (5) | 0.415 (3) | 0.032 (7)* | |
H6B | 0.378 (2) | 0.549 (6) | 0.526 (3) | 0.042 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0123 (6) | 0.0084 (6) | 0.0077 (5) | 0.0011 (4) | −0.0021 (5) | −0.0007 (5) |
Mn1 | 0.01003 (13) | 0.00725 (13) | 0.00831 (14) | 0.00045 (6) | 0.00077 (9) | −0.00071 (10) |
O1 | 0.0172 (5) | 0.0122 (5) | 0.0111 (6) | 0.0058 (4) | 0.0010 (4) | 0.0006 (5) |
O2 | 0.0123 (6) | 0.0126 (6) | 0.0092 (6) | 0.0014 (4) | −0.0019 (4) | 0.0008 (4) |
O3 | 0.0130 (6) | 0.0115 (6) | 0.0152 (6) | −0.0006 (4) | 0.0025 (4) | −0.0039 (4) |
O4 | 0.0122 (5) | 0.0100 (4) | 0.0267 (7) | −0.0025 (4) | 0.0014 (5) | −0.0026 (5) |
O5 | 0.0139 (5) | 0.0101 (5) | 0.0135 (6) | −0.0005 (4) | −0.0006 (5) | −0.0004 (5) |
O6 | 0.0215 (7) | 0.0124 (6) | 0.0097 (7) | 0.0033 (5) | 0.0017 (5) | 0.0005 (5) |
C1 | 0.0141 (8) | 0.0109 (7) | 0.0084 (7) | 0.0028 (6) | −0.0015 (6) | −0.0020 (6) |
C2 | 0.0090 (6) | 0.0095 (8) | 0.0102 (9) | −0.0025 (5) | −0.0004 (6) | 0.0012 (6) |
C3 | 0.0112 (7) | 0.0153 (7) | 0.0142 (8) | −0.0023 (6) | 0.0021 (6) | −0.0032 (6) |
C4 | 0.0118 (7) | 0.0091 (6) | 0.0121 (9) | 0.0019 (5) | −0.0026 (5) | 0.0020 (5) |
N1—C1 | 1.472 (2) | O2—Mn1ii | 2.1221 (12) |
N1—C3 | 1.4735 (19) | O3—C4 | 1.262 (2) |
N1—Mn1 | 2.2738 (14) | O4—C4 | 1.2516 (18) |
N1—H2A | 0.9100 | O6—H6A | 0.94 (3) |
Mn1—O2i | 2.1221 (12) | O6—H6B | 0.87 (3) |
Mn1—O3 | 2.1547 (12) | C1—C2 | 1.524 (2) |
Mn1—O6 | 2.1829 (12) | C1—H1B | 0.88 (3) |
Mn1—O5 | 2.2452 (12) | C1—H1A | 1.02 (2) |
Mn1—O1 | 2.2718 (13) | C3—C4 | 1.522 (2) |
O1—C2 | 1.249 (2) | C3—H3B | 0.95 (3) |
O2—C2 | 1.274 (2) | C3—H3A | 0.98 (2) |
C1—N1—C3 | 113.31 (12) | C4—O3—Mn1 | 118.36 (10) |
C1—N1—Mn1 | 105.60 (9) | Mn1—O6—H6A | 126.2 (18) |
C3—N1—Mn1 | 109.61 (9) | Mn1—O6—H6B | 116.1 (18) |
C1—N1—H2A | 109.4 | H6A—O6—H6B | 104 (3) |
C3—N1—H2A | 109.4 | N1—C1—C2 | 110.96 (13) |
Mn1—N1—H2A | 109.4 | N1—C1—H1B | 111.7 (16) |
O2i—Mn1—O3 | 88.83 (5) | C2—C1—H1B | 106.8 (16) |
O2i—Mn1—O6 | 113.12 (5) | N1—C1—H1A | 109.2 (12) |
O3—Mn1—O6 | 96.37 (5) | C2—C1—H1A | 107.4 (13) |
O2i—Mn1—O5 | 94.87 (5) | H1B—C1—H1A | 111 (2) |
O3—Mn1—O5 | 173.82 (5) | O1—C2—O2 | 124.50 (15) |
O6—Mn1—O5 | 86.75 (5) | O1—C2—C1 | 119.51 (16) |
O2i—Mn1—O1 | 87.31 (5) | O2—C2—C1 | 115.98 (15) |
O3—Mn1—O1 | 91.39 (5) | N1—C3—C4 | 114.15 (13) |
O6—Mn1—O1 | 158.19 (4) | N1—C3—H3B | 113.1 (14) |
O5—Mn1—O1 | 83.85 (5) | C4—C3—H3B | 106.6 (16) |
O2i—Mn1—N1 | 155.03 (5) | N1—C3—H3A | 109.5 (12) |
O3—Mn1—N1 | 77.00 (5) | C4—C3—H3A | 106.6 (11) |
O6—Mn1—N1 | 89.10 (5) | H3B—C3—H3A | 106 (2) |
O5—Mn1—N1 | 97.76 (4) | O4—C4—O3 | 123.58 (14) |
O1—Mn1—N1 | 72.80 (5) | O4—C4—C3 | 116.84 (14) |
C2—O1—Mn1 | 112.32 (11) | O3—C4—C3 | 119.56 (13) |
C2—O2—Mn1ii | 120.89 (11) | ||
C1—N1—Mn1—O2i | 75.04 (14) | O5—Mn1—O3—C4 | 22.7 (5) |
C3—N1—Mn1—O2i | −47.34 (16) | O1—Mn1—O3—C4 | 62.29 (11) |
C1—N1—Mn1—O3 | 132.00 (10) | N1—Mn1—O3—C4 | −9.69 (11) |
C3—N1—Mn1—O3 | 9.62 (9) | C3—N1—C1—C2 | 81.10 (16) |
C1—N1—Mn1—O6 | −131.25 (9) | Mn1—N1—C1—C2 | −38.88 (14) |
C3—N1—Mn1—O6 | 106.36 (10) | Mn1—O1—C2—O2 | −158.72 (13) |
C1—N1—Mn1—O5 | −44.66 (9) | Mn1—O1—C2—C1 | 20.09 (18) |
C3—N1—Mn1—O5 | −167.05 (10) | Mn1ii—O2—C2—O1 | 0.2 (2) |
C1—N1—Mn1—O1 | 36.41 (9) | Mn1ii—O2—C2—C1 | −178.64 (10) |
C3—N1—Mn1—O1 | −85.98 (10) | N1—C1—C2—O1 | 13.9 (2) |
O2i—Mn1—O1—C2 | 163.39 (12) | N1—C1—C2—O2 | −167.22 (14) |
O3—Mn1—O1—C2 | −107.84 (12) | C1—N1—C3—C4 | −126.91 (14) |
O6—Mn1—O1—C2 | 3.20 (19) | Mn1—N1—C3—C4 | −9.24 (15) |
O5—Mn1—O1—C2 | 68.20 (11) | Mn1—O3—C4—O4 | −170.61 (12) |
N1—Mn1—O1—C2 | −31.91 (11) | Mn1—O3—C4—C3 | 7.54 (19) |
O2i—Mn1—O3—C4 | 149.58 (12) | N1—C3—C4—O4 | −179.86 (14) |
O6—Mn1—O3—C4 | −97.28 (12) | N1—C3—C4—O3 | 1.9 (2) |
Symmetry codes: (i) −x+1, −y, z−1/2; (ii) −x+1, −y, z+1/2. |
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