Being a close analogue of amflutizole, methyl 4-amino-3-phenylisothiazole-5-carboxylate (C
11H
10N
2O
2S) was assumed to be capable of forming polymorphic structures. Noncentrosymmetric and centrosymmetric polymorphs have been obtained by crystallization from a series of more volatile solvents and from denser tetrachloromethane, respectively. Identical conformations of the molecule are found in both structures. The two polymorphs differ mainly in the intermolecular interactions formed by the amino group and in the type of stacking interactions between the π-systems. The most effective method for revealing packing motifs in structures with intermolecular interactions of different types (hydrogen bonding, stacking, dispersion,
etc.) is to study the pairwise interaction energies using quantum chemical calculations. Molecules form a column as the primary basic structural motif due to stacking interactions in both polymorphic structures under study. The character of a column (straight or zigzag) is determined by the orientations of the stacked molecules (in a `head-to-head' or `head-to-tail' manner). Columns bound by intermolecular N—H
O and N—H
N hydrogen bonds form a double column as the main structural motif in the noncentrosymmetric structure. Double columns in the noncentrosymmetric structure and columns in the centrosymmetric structure interact strongly within the
ab crystallographic plane, forming a layer as a secondary basic structural motif. The noncentrosymmetric structure has a lower density and a lower (by 0.59 kJ mol
−1) lattice energy, calculated using periodic calculations, compared to the centrosymmetric structure.
Supporting information
CCDC references: 2039220; 2039221
For both structures, data collection: CrysAlis PRO (Rigaku OD, 2018); cell refinement: CrysAlis PRO (Rigaku OD, 2018); data reduction: CrysAlis PRO (Rigaku OD, 2018); program(s) used to solve structure: SHELXT2014 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2016 (Sheldrick, 2015b); molecular graphics: Mercury (Macrae et al., 2020); software used to prepare material for publication: SHELXL2016 (Sheldrick, 2015b).
Methyl 4-amino-3-phenylisothiazole-5-carboxylate (1a)
top
Crystal data top
C11H10N2O2S | Dx = 1.459 Mg m−3 |
Mr = 234.27 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, P212121 | Cell parameters from 1316 reflections |
a = 3.9876 (5) Å | θ = 3.8–21.7° |
b = 10.6511 (13) Å | µ = 0.29 mm−1 |
c = 25.107 (2) Å | T = 293 K |
V = 1066.3 (2) Å3 | Plate, colorless |
Z = 4 | 0.20 × 0.15 × 0.08 mm |
F(000) = 488 | |
Data collection top
Rigaku Xcalibur Sapphire3 diffractometer | 1884 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1448 reflections with I > 2σ(I) |
Detector resolution: 16.1827 pixels mm-1 | Rint = 0.069 |
ω scans | θmax = 25.0°, θmin = 3.3° |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2018) | h = −4→4 |
Tmin = 0.108, Tmax = 1.000 | k = −12→10 |
7448 measured reflections | l = −25→29 |
Refinement top
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.055 | w = 1/[σ2(Fo2) + (0.0835P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.161 | (Δ/σ)max = 0.001 |
S = 1.08 | Δρmax = 0.32 e Å−3 |
1884 reflections | Δρmin = −0.27 e Å−3 |
154 parameters | Absolute structure: Flack x determined using 447 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons et al., 2013) |
0 restraints | Absolute structure parameter: −0.05 (12) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.2394 (4) | 0.35815 (11) | 0.54763 (5) | 0.0668 (5) | |
O1 | 0.5651 (12) | 0.5782 (4) | 0.43313 (14) | 0.0764 (12) | |
O2 | 0.2700 (12) | 0.3981 (3) | 0.43330 (12) | 0.0717 (10) | |
N1 | 0.3181 (13) | 0.4133 (4) | 0.60720 (15) | 0.0676 (12) | |
N2 | 0.6782 (13) | 0.6802 (4) | 0.5394 (2) | 0.0659 (12) | |
H2NA | 0.751 (17) | 0.690 (6) | 0.510 (2) | 0.09 (2)* | |
H2NB | 0.829 (16) | 0.719 (6) | 0.562 (2) | 0.080 (19)* | |
C1 | 0.4647 (13) | 0.5246 (5) | 0.60441 (19) | 0.0585 (12) | |
C2 | 0.5288 (12) | 0.5695 (5) | 0.55133 (19) | 0.0562 (11) | |
C3 | 0.4080 (13) | 0.4835 (5) | 0.51442 (18) | 0.0584 (13) | |
C4 | 0.4257 (13) | 0.4936 (5) | 0.4571 (2) | 0.0616 (12) | |
C5 | 0.277 (2) | 0.3949 (6) | 0.37640 (19) | 0.0851 (18) | |
H5A | 0.182862 | 0.471159 | 0.362582 | 0.128* | |
H5B | 0.148297 | 0.324580 | 0.363958 | 0.128* | |
H5C | 0.504661 | 0.386723 | 0.364444 | 0.128* | |
C6 | 0.5616 (13) | 0.5909 (5) | 0.65374 (18) | 0.0599 (13) | |
C7 | 0.7137 (16) | 0.5273 (5) | 0.69520 (19) | 0.0707 (14) | |
H7 | 0.760580 | 0.442141 | 0.691773 | 0.085* | |
C8 | 0.7962 (19) | 0.5891 (6) | 0.74152 (19) | 0.0802 (17) | |
H8 | 0.895947 | 0.544633 | 0.769183 | 0.096* | |
C9 | 0.7354 (18) | 0.7131 (6) | 0.74764 (19) | 0.0799 (16) | |
H9 | 0.794107 | 0.753853 | 0.779057 | 0.096* | |
C10 | 0.5842 (16) | 0.7788 (6) | 0.7064 (2) | 0.0811 (17) | |
H10 | 0.540439 | 0.864097 | 0.710404 | 0.097* | |
C11 | 0.4979 (17) | 0.7193 (5) | 0.6596 (2) | 0.0706 (15) | |
H11 | 0.397894 | 0.764232 | 0.632133 | 0.085* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0790 (9) | 0.0541 (8) | 0.0673 (8) | −0.0041 (8) | 0.0023 (8) | 0.0014 (5) |
O1 | 0.101 (3) | 0.062 (2) | 0.066 (2) | −0.006 (2) | 0.013 (2) | 0.0047 (19) |
O2 | 0.092 (3) | 0.064 (2) | 0.0594 (18) | −0.004 (2) | −0.0054 (19) | −0.0047 (16) |
N1 | 0.086 (3) | 0.054 (3) | 0.063 (2) | −0.002 (2) | 0.007 (2) | 0.0063 (19) |
N2 | 0.075 (3) | 0.054 (3) | 0.068 (3) | −0.010 (2) | 0.001 (2) | 0.003 (2) |
C1 | 0.063 (3) | 0.051 (3) | 0.062 (3) | 0.008 (2) | 0.000 (2) | 0.004 (2) |
C2 | 0.053 (3) | 0.051 (3) | 0.064 (3) | 0.003 (2) | 0.000 (2) | 0.005 (2) |
C3 | 0.063 (3) | 0.055 (3) | 0.057 (3) | 0.004 (2) | 0.001 (2) | 0.000 (2) |
C4 | 0.068 (3) | 0.057 (3) | 0.059 (3) | 0.007 (2) | 0.002 (2) | −0.001 (2) |
C5 | 0.106 (5) | 0.090 (4) | 0.059 (3) | 0.004 (4) | −0.010 (3) | −0.006 (3) |
C6 | 0.058 (3) | 0.061 (3) | 0.061 (3) | −0.003 (2) | −0.001 (2) | 0.002 (2) |
C7 | 0.076 (4) | 0.072 (4) | 0.064 (3) | 0.000 (3) | −0.003 (3) | 0.009 (2) |
C8 | 0.089 (4) | 0.092 (5) | 0.059 (3) | −0.006 (4) | −0.009 (3) | 0.000 (3) |
C9 | 0.089 (4) | 0.092 (5) | 0.059 (3) | −0.018 (4) | −0.005 (3) | −0.008 (3) |
C10 | 0.099 (4) | 0.065 (4) | 0.079 (3) | −0.011 (3) | 0.009 (3) | −0.009 (3) |
C11 | 0.086 (4) | 0.060 (4) | 0.066 (3) | 0.009 (3) | 0.001 (3) | 0.001 (2) |
Geometric parameters (Å, º) top
S1—N1 | 1.637 (4) | C5—H5B | 0.9600 |
S1—C3 | 1.711 (5) | C5—H5C | 0.9600 |
O1—C4 | 1.219 (6) | C6—C7 | 1.382 (7) |
O2—C4 | 1.334 (6) | C6—C11 | 1.399 (7) |
O2—C5 | 1.429 (6) | C7—C8 | 1.376 (7) |
N1—C1 | 1.323 (6) | C7—H7 | 0.9300 |
N2—C2 | 1.354 (7) | C8—C9 | 1.352 (9) |
N2—H2NA | 0.80 (6) | C8—H8 | 0.9300 |
N2—H2NB | 0.92 (7) | C9—C10 | 1.387 (8) |
C1—C2 | 1.439 (6) | C9—H9 | 0.9300 |
C1—C6 | 1.477 (7) | C10—C11 | 1.379 (7) |
C2—C3 | 1.390 (7) | C10—H10 | 0.9300 |
C3—C4 | 1.444 (7) | C11—H11 | 0.9300 |
C5—H5A | 0.9600 | | |
| | | |
N1—S1—C3 | 95.1 (2) | O2—C5—H5C | 109.5 |
C4—O2—C5 | 117.2 (4) | H5A—C5—H5C | 109.5 |
C1—N1—S1 | 111.0 (3) | H5B—C5—H5C | 109.5 |
C2—N2—H2NA | 119 (5) | C7—C6—C11 | 118.6 (5) |
C2—N2—H2NB | 123 (4) | C7—C6—C1 | 120.8 (5) |
H2NA—N2—H2NB | 105 (6) | C11—C6—C1 | 120.6 (5) |
N1—C1—C2 | 115.2 (4) | C8—C7—C6 | 120.5 (6) |
N1—C1—C6 | 119.9 (4) | C8—C7—H7 | 119.8 |
C2—C1—C6 | 124.8 (5) | C6—C7—H7 | 119.8 |
N2—C2—C3 | 125.4 (5) | C9—C8—C7 | 121.4 (6) |
N2—C2—C1 | 124.9 (5) | C9—C8—H8 | 119.3 |
C3—C2—C1 | 109.7 (5) | C7—C8—H8 | 119.3 |
C2—C3—C4 | 126.7 (5) | C8—C9—C10 | 119.1 (5) |
C2—C3—S1 | 109.0 (4) | C8—C9—H9 | 120.5 |
C4—C3—S1 | 124.2 (4) | C10—C9—H9 | 120.5 |
O1—C4—O2 | 123.7 (5) | C11—C10—C9 | 120.8 (6) |
O1—C4—C3 | 124.8 (5) | C11—C10—H10 | 119.6 |
O2—C4—C3 | 111.6 (5) | C9—C10—H10 | 119.6 |
O2—C5—H5A | 109.5 | C10—C11—C6 | 119.7 (5) |
O2—C5—H5B | 109.5 | C10—C11—H11 | 120.2 |
H5A—C5—H5B | 109.5 | C6—C11—H11 | 120.2 |
| | | |
C3—S1—N1—C1 | 0.8 (4) | S1—C3—C4—O1 | −174.8 (4) |
S1—N1—C1—C2 | −1.6 (6) | C2—C3—C4—O2 | −176.6 (5) |
S1—N1—C1—C6 | −179.3 (4) | S1—C3—C4—O2 | 5.1 (7) |
N1—C1—C2—N2 | −179.5 (5) | N1—C1—C6—C7 | 43.4 (8) |
C6—C1—C2—N2 | −1.9 (8) | C2—C1—C6—C7 | −134.1 (6) |
N1—C1—C2—C3 | 1.7 (7) | N1—C1—C6—C11 | −135.9 (6) |
C6—C1—C2—C3 | 179.3 (5) | C2—C1—C6—C11 | 46.6 (8) |
N2—C2—C3—C4 | 1.7 (9) | C11—C6—C7—C8 | 0.9 (9) |
C1—C2—C3—C4 | −179.5 (5) | C1—C6—C7—C8 | −178.5 (6) |
N2—C2—C3—S1 | −179.8 (5) | C6—C7—C8—C9 | −0.8 (11) |
C1—C2—C3—S1 | −1.1 (5) | C7—C8—C9—C10 | 0.5 (11) |
N1—S1—C3—C2 | 0.2 (4) | C8—C9—C10—C11 | −0.3 (11) |
N1—S1—C3—C4 | 178.7 (5) | C9—C10—C11—C6 | 0.4 (10) |
C5—O2—C4—O1 | 1.6 (8) | C7—C6—C11—C10 | −0.7 (9) |
C5—O2—C4—C3 | −178.3 (5) | C1—C6—C11—C10 | 178.7 (5) |
C2—C3—C4—O1 | 3.4 (9) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2NA···O1 | 0.80 (6) | 2.39 (6) | 2.917 (6) | 124 (6) |
N2—H2NA···N2i | 0.80 (6) | 2.52 (6) | 3.179 (8) | 141 (6) |
N2—H2NB···O1i | 0.92 (7) | 2.36 (7) | 3.078 (6) | 135 (5) |
Symmetry code: (i) x+1/2, −y+3/2, −z+1. |
Methyl 4-amino-3-phenylisothiazole-5-carboxylate (1b)
top
Crystal data top
C11H10N2O2S | Dx = 1.466 Mg m−3 |
Mr = 234.27 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pbca | Cell parameters from 1207 reflections |
a = 6.9210 (9) Å | θ = 4.1–23.2° |
b = 7.2371 (17) Å | µ = 0.29 mm−1 |
c = 42.396 (8) Å | T = 293 K |
V = 2123.5 (7) Å3 | Stick, colourless |
Z = 8 | 0.20 × 0.05 × 0.05 mm |
F(000) = 976 | |
Data collection top
Rigaku Xcalibur Sapphire3 diffractometer | 1868 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1262 reflections with I > 2σ(I) |
Detector resolution: 16.1827 pixels mm-1 | Rint = 0.105 |
ω scans | θmax = 25.0°, θmin = 3.1° |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2018) | h = −8→7 |
Tmin = 0.373, Tmax = 1.000 | k = −8→8 |
13405 measured reflections | l = −50→46 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.056 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.146 | w = 1/[σ2(Fo2) + (0.063P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.001 |
1868 reflections | Δρmax = 0.26 e Å−3 |
154 parameters | Δρmin = −0.32 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.42918 (11) | 0.59107 (14) | 0.57558 (2) | 0.0505 (3) | |
O1 | 0.9859 (3) | 0.6044 (3) | 0.55881 (6) | 0.0570 (7) | |
O2 | 0.7258 (3) | 0.6860 (4) | 0.53025 (5) | 0.0567 (7) | |
N1 | 0.3778 (4) | 0.5226 (4) | 0.61153 (6) | 0.0466 (7) | |
N2 | 0.8945 (4) | 0.4892 (5) | 0.62263 (8) | 0.0507 (8) | |
H2NA | 1.005 (6) | 0.504 (6) | 0.6095 (11) | 0.087 (14)* | |
H2NB | 0.906 (5) | 0.447 (4) | 0.6411 (9) | 0.050 (11)* | |
C1 | 0.5377 (4) | 0.4890 (4) | 0.62771 (8) | 0.0383 (8) | |
C2 | 0.7147 (4) | 0.5166 (4) | 0.61061 (7) | 0.0376 (8) | |
C3 | 0.6725 (4) | 0.5760 (4) | 0.58047 (7) | 0.0395 (8) | |
C4 | 0.8140 (5) | 0.6202 (5) | 0.55628 (8) | 0.0444 (8) | |
C5 | 0.8505 (6) | 0.7393 (5) | 0.50457 (9) | 0.0676 (12) | |
H5A | 0.918208 | 0.632711 | 0.496880 | 0.101* | |
H5B | 0.941971 | 0.829417 | 0.511872 | 0.101* | |
H5C | 0.774296 | 0.791444 | 0.487871 | 0.101* | |
C6 | 0.5208 (4) | 0.4307 (4) | 0.66074 (8) | 0.0392 (8) | |
C7 | 0.3810 (5) | 0.3026 (4) | 0.66978 (9) | 0.0487 (9) | |
H7 | 0.297328 | 0.253813 | 0.654777 | 0.058* | |
C8 | 0.3661 (6) | 0.2480 (5) | 0.70069 (9) | 0.0529 (9) | |
H8 | 0.271709 | 0.162904 | 0.706452 | 0.063* | |
C9 | 0.4882 (6) | 0.3172 (5) | 0.72311 (9) | 0.0575 (10) | |
H9 | 0.478398 | 0.277382 | 0.743911 | 0.069* | |
C10 | 0.6267 (5) | 0.4466 (5) | 0.71482 (9) | 0.0514 (9) | |
H10 | 0.708180 | 0.496064 | 0.730091 | 0.062* | |
C11 | 0.6431 (5) | 0.5016 (4) | 0.68392 (8) | 0.0447 (8) | |
H11 | 0.737122 | 0.587405 | 0.678373 | 0.054* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0392 (5) | 0.0746 (7) | 0.0378 (6) | 0.0036 (4) | 0.0012 (4) | 0.0091 (5) |
O1 | 0.0384 (13) | 0.0772 (17) | 0.0553 (18) | 0.0025 (13) | 0.0042 (12) | 0.0094 (13) |
O2 | 0.0476 (13) | 0.0870 (19) | 0.0354 (14) | 0.0057 (13) | 0.0112 (11) | 0.0155 (13) |
N1 | 0.0425 (16) | 0.0628 (18) | 0.0344 (17) | 0.0012 (14) | 0.0019 (13) | 0.0047 (15) |
N2 | 0.0399 (18) | 0.074 (2) | 0.038 (2) | −0.0018 (17) | −0.0002 (15) | 0.0025 (18) |
C1 | 0.0399 (19) | 0.0397 (17) | 0.035 (2) | 0.0024 (15) | 0.0020 (14) | 0.0002 (16) |
C2 | 0.0371 (17) | 0.0383 (17) | 0.0374 (19) | −0.0015 (15) | −0.0007 (15) | −0.0054 (15) |
C3 | 0.0411 (18) | 0.0488 (19) | 0.0285 (18) | 0.0028 (16) | 0.0010 (14) | 0.0009 (15) |
C4 | 0.043 (2) | 0.050 (2) | 0.040 (2) | −0.0011 (17) | 0.0048 (16) | 0.0000 (16) |
C5 | 0.067 (2) | 0.092 (3) | 0.044 (2) | 0.003 (2) | 0.023 (2) | 0.023 (2) |
C6 | 0.0440 (18) | 0.0403 (17) | 0.033 (2) | 0.0053 (16) | 0.0019 (15) | −0.0003 (15) |
C7 | 0.0491 (19) | 0.052 (2) | 0.045 (2) | −0.0077 (18) | 0.0061 (16) | −0.0009 (17) |
C8 | 0.061 (2) | 0.054 (2) | 0.044 (2) | −0.0070 (18) | 0.0157 (19) | 0.0036 (18) |
C9 | 0.074 (3) | 0.060 (2) | 0.038 (3) | 0.013 (2) | 0.011 (2) | 0.006 (2) |
C10 | 0.058 (2) | 0.056 (2) | 0.040 (2) | 0.0051 (19) | −0.0040 (17) | −0.0039 (18) |
C11 | 0.0473 (19) | 0.0484 (19) | 0.038 (2) | −0.0044 (17) | 0.0044 (16) | −0.0001 (17) |
Geometric parameters (Å, º) top
S1—N1 | 1.642 (3) | C5—H5B | 0.9600 |
S1—C3 | 1.701 (3) | C5—H5C | 0.9600 |
O1—C4 | 1.200 (4) | C6—C7 | 1.394 (4) |
O2—C4 | 1.348 (4) | C6—C11 | 1.395 (5) |
O2—C5 | 1.442 (4) | C7—C8 | 1.373 (5) |
N1—C1 | 1.324 (4) | C7—H7 | 0.9300 |
N2—C2 | 1.360 (4) | C8—C9 | 1.367 (5) |
N2—H2NA | 0.95 (5) | C8—H8 | 0.9300 |
N2—H2NB | 0.85 (4) | C9—C10 | 1.386 (5) |
C1—C2 | 1.438 (4) | C9—H9 | 0.9300 |
C1—C6 | 1.467 (5) | C10—C11 | 1.374 (4) |
C2—C3 | 1.379 (4) | C10—H10 | 0.9300 |
C3—C4 | 1.453 (4) | C11—H11 | 0.9300 |
C5—H5A | 0.9600 | | |
| | | |
N1—S1—C3 | 94.70 (14) | O2—C5—H5C | 109.5 |
C4—O2—C5 | 116.2 (3) | H5A—C5—H5C | 109.5 |
C1—N1—S1 | 110.8 (2) | H5B—C5—H5C | 109.5 |
C2—N2—H2NA | 120 (3) | C7—C6—C11 | 118.2 (3) |
C2—N2—H2NB | 119 (2) | C7—C6—C1 | 120.6 (3) |
H2NA—N2—H2NB | 121 (4) | C11—C6—C1 | 121.2 (3) |
N1—C1—C2 | 115.2 (3) | C8—C7—C6 | 120.4 (3) |
N1—C1—C6 | 118.7 (3) | C8—C7—H7 | 119.8 |
C2—C1—C6 | 126.1 (3) | C6—C7—H7 | 119.8 |
N2—C2—C3 | 125.9 (3) | C9—C8—C7 | 120.8 (3) |
N2—C2—C1 | 124.8 (3) | C9—C8—H8 | 119.6 |
C3—C2—C1 | 109.3 (3) | C7—C8—H8 | 119.6 |
C2—C3—C4 | 125.4 (3) | C8—C9—C10 | 119.9 (4) |
C2—C3—S1 | 110.0 (2) | C8—C9—H9 | 120.0 |
C4—C3—S1 | 124.6 (2) | C10—C9—H9 | 120.0 |
O1—C4—O2 | 123.8 (3) | C11—C10—C9 | 119.6 (3) |
O1—C4—C3 | 125.7 (3) | C11—C10—H10 | 120.2 |
O2—C4—C3 | 110.5 (3) | C9—C10—H10 | 120.2 |
O2—C5—H5A | 109.5 | C10—C11—C6 | 121.0 (3) |
O2—C5—H5B | 109.5 | C10—C11—H11 | 119.5 |
H5A—C5—H5B | 109.5 | C6—C11—H11 | 119.5 |
| | | |
C3—S1—N1—C1 | 0.4 (3) | S1—C3—C4—O1 | −177.2 (3) |
S1—N1—C1—C2 | −0.8 (4) | C2—C3—C4—O2 | −175.8 (3) |
S1—N1—C1—C6 | 178.5 (2) | S1—C3—C4—O2 | 4.0 (4) |
N1—C1—C2—N2 | −179.6 (3) | N1—C1—C6—C7 | 42.1 (4) |
C6—C1—C2—N2 | 1.2 (5) | C2—C1—C6—C7 | −138.8 (3) |
N1—C1—C2—C3 | 0.8 (4) | N1—C1—C6—C11 | −137.7 (3) |
C6—C1—C2—C3 | −178.4 (3) | C2—C1—C6—C11 | 41.4 (5) |
N2—C2—C3—C4 | −0.2 (5) | C11—C6—C7—C8 | −0.3 (5) |
C1—C2—C3—C4 | 179.4 (3) | C1—C6—C7—C8 | 179.8 (3) |
N2—C2—C3—S1 | −180.0 (3) | C6—C7—C8—C9 | −0.3 (5) |
C1—C2—C3—S1 | −0.4 (3) | C7—C8—C9—C10 | 1.2 (6) |
N1—S1—C3—C2 | 0.0 (2) | C8—C9—C10—C11 | −1.4 (5) |
N1—S1—C3—C4 | −179.8 (3) | C9—C10—C11—C6 | 0.8 (5) |
C5—O2—C4—O1 | −0.2 (5) | C7—C6—C11—C10 | 0.1 (5) |
C5—O2—C4—C3 | 178.6 (3) | C1—C6—C11—C10 | 180.0 (3) |
C2—C3—C4—O1 | 3.0 (6) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2NA···O1 | 0.95 (5) | 2.27 (5) | 2.901 (5) | 123 (3) |
N2—H2NA···N1i | 0.95 (5) | 2.58 (4) | 3.386 (4) | 142 (4) |
Symmetry code: (i) x+1, y, z. |
Some characteristics of the solvents used for crystallization of compound
1 topSolvent | Boiling point (°C) | Density (Mg m-3) | Dipole moment (D) |
Isopropanol | 82.4 | 0.785 | 1.66 |
Methanol | 64.7 | 0.792 | 1.65 |
Ethylacetate | 77.1 | 0.902 | 1.78 |
Tetrahydrofuran | 66.0 | 0.888 | 1.63 |
Acetonitrile | 81.3 | 0.786 | 3.92 |
Tetrachloromethane | 76.7 | 1.587 | 0 |
Selected geometric parameters for molecule 1 in
polymorphic crystals 1a and 1b topParameter | Polymorph 1a | Polymorph 1r |
Bond length (Å) | | |
N1—C1 | 1.324 (7) | 1.325 (4) |
C2—C3 | 1.389 (7) | 1.379 (4) |
C1—C2 | 1.439 (7) | 1.437 (4) |
C3—C4 | 1.445 (7) | 1.454 (4) |
C2—N2 | 1.355 (7) | 1.359 (4) |
C4—O1 | 1.218 (7) | 1.200 (4) |
C1—C6 | 1.477 (7) | 1.467 (5) |
ΣN2 (deg) | 348 | 359 |
| | |
Torsion angle (°) | | |
C2—C3—C4—O1 | 3.4 (9) | 3.0 (5) |
C2—C1—C6—C11 | 46.6 (8) | 41.4 (5) |
O1—C4—O2—C5 | 1.6 (8) | -0.2 (5) |
| | |
N2—H···O1 intramolecular hydrogen bond | | |
H···O (Å) | 2.39 (6) | 2.27 (5) |
N—H···O (°) | 125 (5) | 123 (3) |
| | |
Short intramolecular contacts (Å) | | |
C11···N2 | 3.130 (7) | 3.128 (5) |
C11···H2Nb | 2.78 (5) | 2.60 (4) |
H11···H2Nb | | 2.21 |
Geometric characteristics (Å, °) of the intermolecular hydrogen bonds and
stacking interactions in the different polymorphic crystals of compound
1 topInteraction | Symmetry operation | Geometric characteristics | |
| | H···A | D—H···A |
Polymorph 1a | | | |
N2—H2NA···N2(lp) | x+1/2, -y+3/2, -z+1 | 2.52 (6) | 140 (5) |
N2—H2NB···O1 | x+1/2, -y+3/2, -z+1 | 2.36 (6) | 134 (5) |
Stacking isothiazole–isothiazole | x+1, y, z | Distance between mean planes is 3.56 Å
Plane-to-plane shift is 1.806 Å | |
Stacking phenyl–phenyl | x+1, y, z | Distance between mean planes is 3.59 Å
Plane-to-plane shift is 1.735 Å | |
| | | |
Polymorph 1b | | | |
N2—H2NA···N1 | x+1, y, z | 2.59 (4) | 142 (3) |
Stacking isothiazole–isothiazole | x+1, y, z | Distance between mean planes is 3.45 Å
Plane-to-plane shift is 1.194 Å | |
Symmetry codes, interaction energies of the basic unit with neighbouring ones
(Eint, kJ mol-1) with the highest values (more than 5% of the total
interaction energy) and the contribution of this energy to the total
interaction energy (%) in polymorphic crystals 1a (for the full list of
dimers, see Tables S1 in the supporting information) topDimer | Symmetry operation | Eint | Contribution to the total interaction energy | Type of interaction |
d1 | x-1, y, z | -53.09 | 20.0 | Stacking |
d2 | x+1, y, z | -53.09 | 20.0 | Stacking |
d3 | x+1/2, -y+3/2, -z+1 | -30.73 | 11.6 | N—H···O/N—H···N |
d4 | x-1/2, -y+3/2, -z+1 | -30.73 | 11.6 | N—H···O/N—H···N |
d5 | x+1/2, -y+1/2, -z+1 | -20.14 | 7.6 | Dispersion |
d6 | x-1/2, -y+1/2, -z+1 | -20.14 | 7.6 | Dispersion |
Symmetry codes, interaction energies of the basic molecule with neighbouring
ones (Eint, kJ mol-1) with the highest values (more than 5% of
the total interaction energy) and the contribution of this energy to the total
interaction energy (%) in polymorphic crystals 1b (for the full list of
dimers, see Tables S2 in the supporting information) topDimer | Symmetry operation | Eint | Contribution to the total interaction energy | Type of interaction |
d1 | -x+3/2, y-1/2, z | -53.97 | 21.2 | Stacking |
d2 | -x+3/2, y+1/2, z | -53.97 | 21.2 | Stacking |
d3 | -x+1/2, y+1/2, z | -22.69 | 8.9 | Dispersion |
d4 | -x+1/2, y-1/2, z | -22.69 | 8.9 | Dispersion |
d5 | x+1, y, z | -20.05 | 7.9 | N—H···N |
d6 | x-1, y, z | -20.05 | 7.9 | N—H···N |