Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270103008369/tr1053sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270103008369/tr1053Isup2.hkl |
CCDC reference: 214401
Compound (I) was prepared according to the procedure reported by Mlinarić-Majerski et al. (2002). Suitable single crystals of (I) were obtained by slow evaporation from a mixture of dichloromethane and water in a 1:1 molar ratio.
Data collection: CAD-4 EXPRESS (Enraf Nonius, 1994); cell refinement: CAD-4 EXPRESS; data reduction: HELENA (Spek, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
C28H44S6 | F(000) = 2464 |
Mr = 572.99 | Dx = 1.302 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71069 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 25 reflections |
a = 15.154 (4) Å | θ = 5.6–10.2° |
b = 10.499 (3) Å | µ = 0.49 mm−1 |
c = 36.743 (8) Å | T = 293 K |
V = 5846 (3) Å3 | Prism, colourless |
Z = 8 | 0.36 × 0.25 × 0.18 mm |
Enraf Nonius CAD4 diffractometer | 1913 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.014 |
Graphite monochromator | θmax = 26.3°, θmin = 2.2° |
non–profiled ω/2θ scans | h = −18→0 |
Absorption correction: ψ scan (North et al., 1968) | k = −13→0 |
Tmin = 0.765, Tmax = 0.915 | l = 0→45 |
5907 measured reflections | 3 standard reflections every 120 min |
5907 independent reflections | intensity decay: 3% |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.063 | w = 1/[σ2(Fo2) + (0.0826P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.204 | (Δ/σ)max = 0.001 |
S = 0.92 | Δρmax = 0.39 e Å−3 |
5907 reflections | Δρmin = −0.44 e Å−3 |
307 parameters |
C28H44S6 | V = 5846 (3) Å3 |
Mr = 572.99 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 15.154 (4) Å | µ = 0.49 mm−1 |
b = 10.499 (3) Å | T = 293 K |
c = 36.743 (8) Å | 0.36 × 0.25 × 0.18 mm |
Enraf Nonius CAD4 diffractometer | 1913 reflections with I > 2σ(I) |
Absorption correction: ψ scan (North et al., 1968) | Rint = 0.014 |
Tmin = 0.765, Tmax = 0.915 | 3 standard reflections every 120 min |
5907 measured reflections | intensity decay: 3% |
5907 independent reflections |
R[F2 > 2σ(F2)] = 0.063 | 0 restraints |
wR(F2) = 0.204 | H-atom parameters constrained |
S = 0.92 | Δρmax = 0.39 e Å−3 |
5907 reflections | Δρmin = −0.44 e Å−3 |
307 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.31965 (13) | 0.38786 (16) | −0.03968 (5) | 0.0531 (5) | |
S3 | 0.43655 (11) | 0.15845 (15) | −0.04541 (5) | 0.0470 (5) | |
S6 | 0.62503 (11) | 0.3163 (2) | −0.12416 (5) | 0.0623 (5) | |
S9 | 0.43528 (12) | 0.48220 (15) | −0.20082 (5) | 0.0481 (5) | |
S11 | 0.32232 (13) | 0.25192 (17) | −0.21217 (6) | 0.0594 (5) | |
S14 | 0.12906 (13) | 0.3036 (3) | −0.12567 (6) | 0.1140 (11) | |
C2 | 0.3780 (4) | 0.2633 (5) | −0.01374 (16) | 0.0372 (15) | |
C4 | 0.5115 (5) | 0.2665 (6) | −0.0676 (2) | 0.058 (2) | |
H4A | 0.4802 | 0.3439 | −0.0740 | 0.069* | |
H4B | 0.5585 | 0.2890 | −0.0509 | 0.069* | |
C5 | 0.5507 (5) | 0.2096 (7) | −0.10122 (18) | 0.061 (2) | |
H5A | 0.5035 | 0.1861 | −0.1178 | 0.073* | |
H5B | 0.5823 | 0.1325 | −0.0947 | 0.073* | |
C7 | 0.5501 (4) | 0.4251 (6) | −0.14628 (17) | 0.0546 (19) | |
H7A | 0.5027 | 0.4464 | −0.1296 | 0.065* | |
H7B | 0.5813 | 0.5031 | −0.1521 | 0.065* | |
C8 | 0.5114 (4) | 0.3703 (6) | −0.18051 (18) | 0.0537 (19) | |
H8A | 0.4808 | 0.2916 | −0.1749 | 0.064* | |
H8B | 0.5583 | 0.3510 | −0.1976 | 0.064* | |
C10 | 0.3796 (4) | 0.3828 (5) | −0.23524 (16) | 0.0365 (15) | |
C12 | 0.2462 (5) | 0.3343 (8) | −0.1822 (2) | 0.075 (2) | |
H12A | 0.2772 | 0.3997 | −0.1687 | 0.090* | |
H12B | 0.2001 | 0.3749 | −0.1964 | 0.090* | |
C13 | 0.2067 (5) | 0.2392 (8) | −0.1566 (2) | 0.087 (3) | |
H13A | 0.2539 | 0.1994 | −0.1429 | 0.104* | |
H13B | 0.1780 | 0.1731 | −0.1708 | 0.104* | |
C15 | 0.1999 (5) | 0.3836 (8) | −0.09413 (19) | 0.083 (3) | |
H15A | 0.2439 | 0.4312 | −0.1076 | 0.099* | |
H15B | 0.1652 | 0.4440 | −0.0802 | 0.099* | |
C16 | 0.2461 (5) | 0.2943 (8) | −0.0681 (2) | 0.071 (2) | |
H16A | 0.2796 | 0.2312 | −0.0816 | 0.086* | |
H16B | 0.2031 | 0.2503 | −0.0531 | 0.086* | |
C17 | 0.4396 (4) | 0.3352 (5) | 0.01240 (16) | 0.0390 (15) | |
H17 | 0.4796 | 0.3899 | −0.0016 | 0.047* | |
C18 | 0.4937 (4) | 0.2398 (6) | 0.03509 (19) | 0.0517 (19) | |
H18A | 0.5287 | 0.1866 | 0.0191 | 0.062* | |
H18B | 0.5335 | 0.2855 | 0.0511 | 0.062* | |
C19 | 0.4316 (5) | 0.1565 (6) | 0.05764 (17) | 0.0499 (17) | |
H19 | 0.4662 | 0.0954 | 0.0719 | 0.060* | |
C20 | 0.3772 (4) | 0.2407 (7) | 0.08343 (19) | 0.057 (2) | |
H20A | 0.3384 | 0.1883 | 0.0981 | 0.068* | |
H20B | 0.4162 | 0.2871 | 0.0996 | 0.068* | |
C21 | 0.3228 (5) | 0.3345 (6) | 0.06058 (17) | 0.0538 (18) | |
H21 | 0.2877 | 0.3887 | 0.0768 | 0.065* | |
C22 | 0.2622 (4) | 0.2631 (6) | 0.0354 (2) | 0.056 (2) | |
H22A | 0.2270 | 0.3231 | 0.0215 | 0.068* | |
H22B | 0.2225 | 0.2101 | 0.0495 | 0.068* | |
C23 | 0.3160 (4) | 0.1799 (6) | 0.00935 (16) | 0.0413 (15) | |
H23 | 0.2760 | 0.1326 | −0.0067 | 0.050* | |
C24 | 0.3700 (4) | 0.0856 (6) | 0.03250 (17) | 0.0478 (17) | |
H24A | 0.3303 | 0.0329 | 0.0467 | 0.057* | |
H24B | 0.4040 | 0.0303 | 0.0166 | 0.057* | |
C25 | 0.3866 (4) | 0.4163 (6) | 0.03924 (17) | 0.0485 (17) | |
H25A | 0.4266 | 0.4588 | 0.0559 | 0.058* | |
H25B | 0.3542 | 0.4812 | 0.0260 | 0.058* | |
C26 | 0.4432 (4) | 0.3233 (6) | −0.26240 (16) | 0.0434 (16) | |
H26 | 0.4839 | 0.2663 | −0.2496 | 0.052* | |
C27 | 0.4959 (4) | 0.4285 (7) | −0.28194 (18) | 0.0567 (19) | |
H27A | 0.5288 | 0.4778 | −0.2642 | 0.068* | |
H27B | 0.5377 | 0.3902 | −0.2987 | 0.068* | |
C28 | 0.4341 (5) | 0.5153 (7) | −0.30265 (19) | 0.062 (2) | |
H28 | 0.4683 | 0.5822 | −0.3147 | 0.075* | |
C29 | 0.3832 (5) | 0.4410 (7) | −0.33084 (19) | 0.066 (2) | |
H29A | 0.4237 | 0.4022 | −0.3480 | 0.080* | |
H29B | 0.3444 | 0.4978 | −0.3442 | 0.080* | |
C30 | 0.3285 (5) | 0.3373 (7) | −0.31188 (19) | 0.0557 (19) | |
H30 | 0.2952 | 0.2887 | −0.3300 | 0.067* | |
C31 | 0.2654 (4) | 0.3969 (7) | −0.28460 (19) | 0.0561 (19) | |
H31A | 0.2316 | 0.3306 | −0.2726 | 0.067* | |
H31B | 0.2245 | 0.4527 | −0.2972 | 0.067* | |
C32 | 0.3172 (4) | 0.4729 (5) | −0.25630 (18) | 0.0436 (16) | |
H32 | 0.2760 | 0.5132 | −0.2393 | 0.052* | |
C33 | 0.3706 (5) | 0.5753 (6) | −0.2759 (2) | 0.0607 (19) | |
H33A | 0.3310 | 0.6323 | −0.2887 | 0.073* | |
H33B | 0.4034 | 0.6250 | −0.2582 | 0.073* | |
C34 | 0.3914 (5) | 0.2475 (6) | −0.2910 (2) | 0.057 (2) | |
H34A | 0.3575 | 0.1809 | −0.2791 | 0.069* | |
H34B | 0.4320 | 0.2075 | −0.3079 | 0.069* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0652 (12) | 0.0451 (10) | 0.0491 (10) | 0.0137 (9) | −0.0053 (10) | 0.0006 (9) |
S3 | 0.0440 (9) | 0.0398 (9) | 0.0572 (11) | −0.0002 (8) | 0.0094 (9) | −0.0127 (8) |
S6 | 0.0393 (9) | 0.0970 (14) | 0.0506 (10) | −0.0012 (12) | 0.0022 (10) | 0.0119 (11) |
S9 | 0.0499 (10) | 0.0394 (9) | 0.0549 (10) | −0.0006 (9) | −0.0090 (9) | −0.0120 (8) |
S11 | 0.0614 (13) | 0.0489 (11) | 0.0679 (12) | −0.0168 (10) | 0.0037 (11) | 0.0005 (9) |
S14 | 0.0434 (11) | 0.245 (3) | 0.0538 (12) | −0.0162 (19) | −0.0043 (12) | 0.0184 (18) |
C2 | 0.036 (4) | 0.035 (3) | 0.040 (4) | 0.000 (3) | 0.007 (3) | 0.001 (3) |
C4 | 0.051 (5) | 0.056 (5) | 0.066 (5) | −0.015 (4) | 0.009 (4) | −0.012 (4) |
C5 | 0.073 (5) | 0.060 (4) | 0.049 (4) | 0.001 (4) | 0.015 (4) | −0.013 (4) |
C7 | 0.053 (4) | 0.060 (4) | 0.051 (4) | −0.020 (4) | −0.008 (4) | 0.000 (4) |
C8 | 0.044 (4) | 0.060 (4) | 0.057 (4) | −0.001 (4) | −0.009 (4) | −0.021 (4) |
C10 | 0.031 (3) | 0.037 (3) | 0.041 (4) | −0.006 (3) | 0.002 (3) | −0.002 (3) |
C12 | 0.052 (5) | 0.089 (6) | 0.084 (5) | −0.012 (4) | 0.011 (4) | 0.014 (5) |
C13 | 0.080 (6) | 0.121 (8) | 0.059 (5) | −0.052 (6) | 0.002 (5) | −0.003 (5) |
C15 | 0.078 (6) | 0.122 (7) | 0.048 (4) | 0.056 (5) | 0.004 (4) | −0.001 (5) |
C16 | 0.069 (5) | 0.086 (6) | 0.060 (5) | 0.008 (5) | −0.015 (4) | −0.004 (5) |
C17 | 0.039 (3) | 0.033 (3) | 0.045 (4) | −0.005 (3) | −0.006 (3) | 0.001 (3) |
C18 | 0.043 (4) | 0.050 (4) | 0.063 (5) | 0.003 (3) | −0.007 (4) | −0.010 (4) |
C19 | 0.053 (4) | 0.046 (4) | 0.051 (4) | 0.008 (4) | −0.001 (4) | 0.011 (4) |
C20 | 0.049 (4) | 0.069 (5) | 0.052 (4) | −0.004 (4) | −0.010 (4) | 0.013 (4) |
C21 | 0.054 (4) | 0.060 (5) | 0.047 (4) | 0.004 (4) | −0.002 (4) | −0.006 (4) |
C22 | 0.036 (4) | 0.056 (5) | 0.077 (5) | 0.000 (3) | 0.015 (4) | 0.000 (4) |
C23 | 0.030 (3) | 0.049 (4) | 0.045 (4) | −0.004 (3) | 0.005 (3) | −0.002 (3) |
C24 | 0.058 (4) | 0.034 (4) | 0.052 (4) | 0.002 (3) | −0.002 (4) | 0.009 (3) |
C25 | 0.063 (5) | 0.036 (4) | 0.046 (4) | 0.007 (3) | −0.001 (4) | −0.013 (3) |
C26 | 0.040 (3) | 0.037 (4) | 0.053 (4) | 0.017 (3) | −0.008 (3) | −0.006 (3) |
C27 | 0.043 (4) | 0.070 (5) | 0.056 (4) | −0.007 (4) | 0.006 (4) | −0.010 (4) |
C28 | 0.057 (5) | 0.066 (5) | 0.065 (5) | −0.015 (4) | −0.004 (5) | 0.002 (4) |
C29 | 0.082 (6) | 0.065 (5) | 0.052 (4) | −0.001 (5) | −0.002 (4) | 0.006 (4) |
C30 | 0.056 (4) | 0.056 (5) | 0.055 (4) | 0.000 (4) | −0.013 (4) | −0.013 (4) |
C31 | 0.040 (4) | 0.056 (5) | 0.072 (5) | 0.006 (4) | −0.011 (4) | −0.001 (4) |
C32 | 0.032 (3) | 0.032 (3) | 0.067 (5) | 0.005 (3) | −0.008 (3) | −0.012 (3) |
C33 | 0.063 (5) | 0.042 (4) | 0.078 (5) | 0.004 (4) | −0.009 (4) | 0.003 (4) |
C34 | 0.067 (5) | 0.045 (4) | 0.060 (5) | 0.009 (4) | −0.010 (4) | −0.020 (3) |
S1—C16 | 1.816 (8) | C19—C24 | 1.509 (8) |
S1—C2 | 1.844 (6) | C19—C20 | 1.535 (9) |
S3—C4 | 1.801 (6) | C19—H19 | 0.9800 |
S3—C2 | 1.831 (6) | C20—C21 | 1.535 (9) |
S6—C5 | 1.798 (7) | C20—H20A | 0.9700 |
S6—C7 | 1.805 (7) | C20—H20B | 0.9700 |
S9—C8 | 1.808 (7) | C21—C22 | 1.504 (9) |
S9—C10 | 1.844 (6) | C21—C25 | 1.513 (9) |
S11—C12 | 1.813 (8) | C21—H21 | 0.9800 |
S11—C10 | 1.833 (6) | C22—C23 | 1.531 (8) |
S14—C13 | 1.771 (8) | C22—H22A | 0.9700 |
S14—C15 | 1.789 (8) | C22—H22B | 0.9700 |
C2—C17 | 1.538 (8) | C23—C24 | 1.540 (8) |
C2—C23 | 1.540 (8) | C23—H23 | 0.9800 |
C4—C5 | 1.495 (9) | C24—H24A | 0.9700 |
C4—H4A | 0.9700 | C24—H24B | 0.9700 |
C4—H4B | 0.9700 | C25—H25A | 0.9700 |
C5—H5A | 0.9700 | C25—H25B | 0.9700 |
C5—H5B | 0.9700 | C26—C34 | 1.534 (8) |
C7—C8 | 1.502 (8) | C26—C27 | 1.541 (8) |
C7—H7A | 0.9700 | C26—H26 | 0.9800 |
C7—H7B | 0.9700 | C27—C28 | 1.512 (9) |
C8—H8A | 0.9700 | C27—H27A | 0.9700 |
C8—H8B | 0.9700 | C27—H27B | 0.9700 |
C10—C26 | 1.521 (8) | C28—C29 | 1.509 (9) |
C10—C32 | 1.546 (8) | C28—C33 | 1.513 (9) |
C12—C13 | 1.498 (9) | C28—H28 | 0.9800 |
C12—H12A | 0.9700 | C29—C30 | 1.535 (9) |
C12—H12B | 0.9700 | C29—H29A | 0.9700 |
C13—H13A | 0.9700 | C29—H29B | 0.9700 |
C13—H13B | 0.9700 | C30—C31 | 1.520 (9) |
C15—C16 | 1.511 (10) | C30—C34 | 1.545 (9) |
C15—H15A | 0.9700 | C30—H30 | 0.9800 |
C15—H15B | 0.9700 | C31—C32 | 1.527 (8) |
C16—H16A | 0.9700 | C31—H31A | 0.9700 |
C16—H16B | 0.9700 | C31—H31B | 0.9700 |
C17—C25 | 1.531 (8) | C32—C33 | 1.527 (8) |
C17—C18 | 1.539 (8) | C32—H32 | 0.9800 |
C17—H17 | 0.9800 | C33—H33A | 0.9700 |
C18—C19 | 1.528 (8) | C33—H33B | 0.9700 |
C18—H18A | 0.9700 | C34—H34A | 0.9700 |
C18—H18B | 0.9700 | C34—H34B | 0.9700 |
C16—S1—C2 | 102.0 (3) | C21—C20—H20B | 110.0 |
C4—S3—C2 | 102.4 (3) | C19—C20—H20B | 110.0 |
C5—S6—C7 | 102.2 (3) | H20A—C20—H20B | 108.3 |
C8—S9—C10 | 101.9 (3) | C22—C21—C25 | 110.7 (6) |
C12—S11—C10 | 102.9 (3) | C22—C21—C20 | 110.2 (6) |
C13—S14—C15 | 101.4 (3) | C25—C21—C20 | 107.7 (6) |
C17—C2—C23 | 107.8 (5) | C22—C21—H21 | 109.4 |
C17—C2—S3 | 113.4 (4) | C25—C21—H21 | 109.4 |
C23—C2—S3 | 107.7 (4) | C20—C21—H21 | 109.4 |
C17—C2—S1 | 105.4 (4) | C21—C22—C23 | 110.1 (5) |
C23—C2—S1 | 113.3 (4) | C21—C22—H22A | 109.6 |
S3—C2—S1 | 109.3 (3) | C23—C22—H22A | 109.6 |
C5—C4—S3 | 111.9 (5) | C21—C22—H22B | 109.6 |
C5—C4—H4A | 109.2 | C23—C22—H22B | 109.6 |
S3—C4—H4A | 109.2 | H22A—C22—H22B | 108.2 |
C5—C4—H4B | 109.2 | C22—C23—C2 | 110.1 (5) |
S3—C4—H4B | 109.2 | C22—C23—C24 | 107.8 (5) |
H4A—C4—H4B | 107.9 | C2—C23—C24 | 110.2 (5) |
C4—C5—S6 | 112.8 (5) | C22—C23—H23 | 109.6 |
C4—C5—H5A | 109.0 | C2—C23—H23 | 109.6 |
S6—C5—H5A | 109.0 | C24—C23—H23 | 109.6 |
C4—C5—H5B | 109.0 | C19—C24—C23 | 110.5 (5) |
S6—C5—H5B | 109.0 | C19—C24—H24A | 109.6 |
H5A—C5—H5B | 107.8 | C23—C24—H24A | 109.6 |
C8—C7—S6 | 112.3 (5) | C19—C24—H24B | 109.6 |
C8—C7—H7A | 109.1 | C23—C24—H24B | 109.6 |
S6—C7—H7A | 109.1 | H24A—C24—H24B | 108.1 |
C8—C7—H7B | 109.1 | C21—C25—C17 | 110.7 (5) |
S6—C7—H7B | 109.1 | C21—C25—H25A | 109.5 |
H7A—C7—H7B | 107.9 | C17—C25—H25A | 109.5 |
C7—C8—S9 | 110.2 (5) | C21—C25—H25B | 109.5 |
C7—C8—H8A | 109.6 | C17—C25—H25B | 109.5 |
S9—C8—H8A | 109.6 | H25A—C25—H25B | 108.1 |
C7—C8—H8B | 109.6 | C10—C26—C34 | 109.7 (5) |
S9—C8—H8B | 109.6 | C10—C26—C27 | 109.8 (5) |
H8A—C8—H8B | 108.1 | C34—C26—C27 | 108.6 (5) |
C26—C10—C32 | 108.1 (5) | C10—C26—H26 | 109.6 |
C26—C10—S11 | 107.2 (4) | C34—C26—H26 | 109.6 |
C32—C10—S11 | 113.6 (4) | C27—C26—H26 | 109.6 |
C26—C10—S9 | 113.1 (4) | C28—C27—C26 | 110.2 (5) |
C32—C10—S9 | 106.1 (4) | C28—C27—H27A | 109.6 |
S11—C10—S9 | 108.9 (3) | C26—C27—H27A | 109.6 |
C13—C12—S11 | 108.5 (6) | C28—C27—H27B | 109.6 |
C13—C12—H12A | 110.0 | C26—C27—H27B | 109.6 |
S11—C12—H12A | 110.0 | H27A—C27—H27B | 108.1 |
C13—C12—H12B | 110.0 | C29—C28—C27 | 110.6 (6) |
S11—C12—H12B | 110.0 | C29—C28—C33 | 109.7 (6) |
H12A—C12—H12B | 108.4 | C27—C28—C33 | 108.5 (6) |
C12—C13—S14 | 114.5 (6) | C29—C28—H28 | 109.3 |
C12—C13—H13A | 108.6 | C27—C28—H28 | 109.3 |
S14—C13—H13A | 108.6 | C33—C28—H28 | 109.3 |
C12—C13—H13B | 108.6 | C28—C29—C30 | 109.3 (6) |
S14—C13—H13B | 108.6 | C28—C29—H29A | 109.8 |
H13A—C13—H13B | 107.6 | C30—C29—H29A | 109.8 |
C16—C15—S14 | 113.4 (6) | C28—C29—H29B | 109.8 |
C16—C15—H15A | 108.9 | C30—C29—H29B | 109.8 |
S14—C15—H15A | 108.9 | H29A—C29—H29B | 108.3 |
C16—C15—H15B | 108.9 | C31—C30—C29 | 110.3 (6) |
S14—C15—H15B | 108.9 | C31—C30—C34 | 108.1 (6) |
H15A—C15—H15B | 107.7 | C29—C30—C34 | 109.0 (6) |
C15—C16—S1 | 108.2 (6) | C31—C30—H30 | 109.8 |
C15—C16—H16A | 110.1 | C29—C30—H30 | 109.8 |
S1—C16—H16A | 110.1 | C34—C30—H30 | 109.8 |
C15—C16—H16B | 110.1 | C30—C31—C32 | 109.9 (5) |
S1—C16—H16B | 110.1 | C30—C31—H31A | 109.7 |
H16A—C16—H16B | 108.4 | C32—C31—H31A | 109.7 |
C25—C17—C2 | 110.9 (5) | C30—C31—H31B | 109.7 |
C25—C17—C18 | 107.0 (5) | C32—C31—H31B | 109.7 |
C2—C17—C18 | 110.0 (5) | H31A—C31—H31B | 108.2 |
C25—C17—H17 | 109.6 | C33—C32—C31 | 108.7 (6) |
C2—C17—H17 | 109.6 | C33—C32—C10 | 110.0 (5) |
C18—C17—H17 | 109.6 | C31—C32—C10 | 109.6 (5) |
C19—C18—C17 | 109.7 (5) | C33—C32—H32 | 109.5 |
C19—C18—H18A | 109.7 | C31—C32—H32 | 109.5 |
C17—C18—H18A | 109.7 | C10—C32—H32 | 109.5 |
C19—C18—H18B | 109.7 | C28—C33—C32 | 110.5 (6) |
C17—C18—H18B | 109.7 | C28—C33—H33A | 109.6 |
H18A—C18—H18B | 108.2 | C32—C33—H33A | 109.6 |
C24—C19—C18 | 109.3 (5) | C28—C33—H33B | 109.6 |
C24—C19—C20 | 109.3 (6) | C32—C33—H33B | 109.6 |
C18—C19—C20 | 109.6 (5) | H33A—C33—H33B | 108.1 |
C24—C19—H19 | 109.5 | C26—C34—C30 | 109.8 (5) |
C18—C19—H19 | 109.5 | C26—C34—H34A | 109.7 |
C20—C19—H19 | 109.5 | C30—C34—H34A | 109.7 |
C21—C20—C19 | 108.6 (6) | C26—C34—H34B | 109.7 |
C21—C20—H20A | 110.0 | C30—C34—H34B | 109.7 |
C19—C20—H20A | 110.0 | H34A—C34—H34B | 108.2 |
C4—S3—C2—C17 | −56.5 (5) | S1—C2—C23—C22 | −56.6 (6) |
C4—S3—C2—C23 | −175.7 (4) | C17—C2—C23—C24 | −59.1 (6) |
C4—S3—C2—S1 | 60.8 (4) | S3—C2—C23—C24 | 63.6 (5) |
C16—S1—C2—C17 | −177.8 (4) | S1—C2—C23—C24 | −175.4 (4) |
C16—S1—C2—C23 | −60.1 (5) | C18—C19—C24—C23 | −59.0 (7) |
C16—S1—C2—S3 | 60.0 (4) | C20—C19—C24—C23 | 60.9 (7) |
C2—S3—C4—C5 | −165.6 (5) | C22—C23—C24—C19 | −60.4 (7) |
S3—C4—C5—S6 | 179.4 (4) | C2—C23—C24—C19 | 59.9 (7) |
C7—S6—C5—C4 | −76.3 (6) | C22—C21—C25—C17 | −56.8 (7) |
C5—S6—C7—C8 | −79.1 (5) | C20—C21—C25—C17 | 63.8 (7) |
S6—C7—C8—S9 | 178.8 (3) | C2—C17—C25—C21 | 57.5 (7) |
C10—S9—C8—C7 | −168.0 (5) | C18—C17—C25—C21 | −62.5 (7) |
C12—S11—C10—C26 | −177.8 (4) | C32—C10—C26—C34 | −60.3 (6) |
C12—S11—C10—C32 | −58.4 (5) | S11—C10—C26—C34 | 62.5 (5) |
C12—S11—C10—S9 | 59.5 (4) | S9—C10—C26—C34 | −177.4 (4) |
C8—S9—C10—C26 | −57.6 (5) | C32—C10—C26—C27 | 59.1 (6) |
C8—S9—C10—C32 | −176.0 (4) | S11—C10—C26—C27 | −178.2 (4) |
C8—S9—C10—S11 | 61.4 (4) | S9—C10—C26—C27 | −58.1 (6) |
C10—S11—C12—C13 | −169.6 (5) | C10—C26—C27—C28 | −61.1 (7) |
S11—C12—C13—S14 | −179.2 (4) | C34—C26—C27—C28 | 58.9 (7) |
C15—S14—C13—C12 | −75.2 (7) | C26—C27—C28—C29 | −60.2 (7) |
C13—S14—C15—C16 | −76.0 (7) | C26—C27—C28—C33 | 60.2 (7) |
S14—C15—C16—S1 | 176.9 (4) | C27—C28—C29—C30 | 60.4 (8) |
C2—S1—C16—C15 | −174.2 (5) | C33—C28—C29—C30 | −59.3 (8) |
C23—C2—C17—C25 | −58.3 (6) | C28—C29—C30—C31 | 58.8 (8) |
S3—C2—C17—C25 | −177.4 (4) | C28—C29—C30—C34 | −59.8 (7) |
S1—C2—C17—C25 | 63.0 (5) | C29—C30—C31—C32 | −58.8 (7) |
C23—C2—C17—C18 | 59.9 (6) | C34—C30—C31—C32 | 60.3 (7) |
S3—C2—C17—C18 | −59.2 (6) | C30—C31—C32—C33 | 58.7 (7) |
S1—C2—C17—C18 | −178.8 (4) | C30—C31—C32—C10 | −61.6 (7) |
C25—C17—C18—C19 | 59.8 (6) | C26—C10—C32—C33 | −58.9 (6) |
C2—C17—C18—C19 | −60.8 (7) | S11—C10—C32—C33 | −177.7 (4) |
C17—C18—C19—C24 | 59.5 (6) | S9—C10—C32—C33 | 62.8 (6) |
C17—C18—C19—C20 | −60.3 (7) | C26—C10—C32—C31 | 60.5 (6) |
C24—C19—C20—C21 | −59.3 (7) | S11—C10—C32—C31 | −58.3 (6) |
C18—C19—C20—C21 | 60.5 (7) | S9—C10—C32—C31 | −177.8 (4) |
C19—C20—C21—C22 | 59.6 (7) | C29—C28—C33—C32 | 60.8 (7) |
C19—C20—C21—C25 | −61.3 (7) | C27—C28—C33—C32 | −60.1 (8) |
C25—C21—C22—C23 | 58.3 (7) | C31—C32—C33—C28 | −59.9 (7) |
C20—C21—C22—C23 | −60.8 (7) | C10—C32—C33—C28 | 60.1 (7) |
C21—C22—C23—C2 | −60.5 (7) | C10—C26—C34—C30 | 61.0 (7) |
C21—C22—C23—C24 | 59.8 (7) | C27—C26—C34—C30 | −59.1 (7) |
C17—C2—C23—C22 | 59.6 (6) | C31—C30—C34—C26 | −59.9 (7) |
S3—C2—C23—C22 | −177.6 (4) | C29—C30—C34—C26 | 60.0 (7) |
Experimental details
Crystal data | |
Chemical formula | C28H44S6 |
Mr | 572.99 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 293 |
a, b, c (Å) | 15.154 (4), 10.499 (3), 36.743 (8) |
V (Å3) | 5846 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.49 |
Crystal size (mm) | 0.36 × 0.25 × 0.18 |
Data collection | |
Diffractometer | Enraf Nonius CAD4 diffractometer |
Absorption correction | ψ scan (North et al., 1968) |
Tmin, Tmax | 0.765, 0.915 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5907, 5907, 1913 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.623 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.063, 0.204, 0.92 |
No. of reflections | 5907 |
No. of parameters | 307 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.39, −0.44 |
Computer programs: CAD-4 EXPRESS (Enraf Nonius, 1994), CAD-4 EXPRESS, HELENA (Spek, 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
Refcode | S6-S14 | S1-S9 | S3-S11 |
(I) | 7.51 | 6.45 | 6.26 |
KAVYIP | 8.07 | 4.47 | 8.85 |
KAVYIP | 6.75 | 4.85 | 8.20 |
KAVYOV | 3.99 | 3.86 | 6.56 |
SOLHIK | 4.26 | 4.39 | 6.69 |
WEKWUE | 7.20 | 8.71 | 7.09 |
WEKXIT | 7.17 | 6.72 | 6.76 |
Subscribe to Acta Crystallographica Section C: Structural Chemistry
The full text of this article is available to subscribers to the journal.
- Information on subscribing
- Sample issue
- Purchase subscription
- Reduced-price subscriptions
- If you have already subscribed, you may need to register
Macrocyclic thiaethers have been a topic of interest because of their moderately low σ-donating and π-accepting properties. They also reveal increased thermodynamic stability over open-chain analogues as a result of the macrocyclic effect (Blake & Schroeder, 1990). These crown-like molecules have been extensively used as chelators for specific metal ions and phase-transfer catalysts. Recently, a series of cage-annulated sulfur-containing crown-ethers and cryptands were synthesized and their complexation properties evaluated (Williams et al., 2002). As a possible specific metal host system we have designed and prepared an adamantylidene-derived thiaether, (I) (Mlinarić-Majerski et al., 2002). The C—C bonds inside the 16-membered macrocycle [in the range 1.490 (13)–1.520 (15) Å] are considerably shorter than expected for Csp3—Csp3 linkages (Allen et al., 1987; Allen, 2002). This phenomenon has already been observed in numerous macrocyclic structures (Hill & Feller, 2000; Maverick et al., 1980; Dunitz & Seiler, 1974).
Generally, the conformation of a macrocyclic thiaether is determined by the torsional angles along the [–S—CH2—CH2]-S-[CH2—CH2—S–] moieties designated as brackets according to De Groot and Loeb (1989). These brackets are formed because S—C bonds tend to adopt a gauche conformation, and C—C bonds tend to favor an anti conformation inside the bracket. The molecule of (I) consists of two brackets (S11—C12—C13—S14—C15—C16—S1 and S3—C4—C5—S6—C7—C8—S9) joined by two methylene bridges at atoms C2 and C10 in a spiro junction to the two adamantyl moieties. According to DeSimone & Glick (1976) the orientations of the S atoms in macrocyclic thiaethers can be described as endo- or exodentate. In the structure of (I), atoms S6 and S14 are exodentate, whereas the remaining four S atoms (S1, S3, S9 and S11) are endodentate. Four endocyclic C—C bonds (C4—C5, C7—C8, C12—C13 and C15—C16) strictly obey the above-quoted rule with an anti conformation about four S—C—C—S units. Consequently, the exodentate orientation of atoms S6 and S14 occurred. Four out of eight S—C bonds inside the brackets (involving bonds with two central sulfur atoms, viz. S6—C5, S6—C7, S14—C13 and S14—C15) adopt the gauche conformation. The remaining four S—C bonds (involving bonds with the side S atoms, viz. S1—C16, S3—C4, S9—C8 and S11—C12) adopt an anti conformation; these S atoms are endodentate. The conformations about the four S—C bonds involving two bridging methylene groups (C2—S1, C2—S3, C10—S11 and C10—S9) are all gauche. This arrangement generates a rectangular projection of the 16-macrocyclic ring of an approximate D2 symmetry (with S6, S14, C2 and C10 at the corners). The approximate D2 symmetry is valid for the complete molecule as well. The average length? of the 'square' edge is 5.570 (15) Å and the diagonals are 8.240 (12) Å (C2—C10) and 7.514 (11) Å (S6—S14). The opposite endodentate S atoms are separated by 6.449 (10) (S1—S9) and 6.257 (13) Å (S3—S11). Thus, the cavity of (I) might be suitable for complexation of Ag+ or Cu+.
The presence of the adamantane cages at positions 2 and 10 greatly affects the conformation of the [16]ane-S6 macrocycle. In order to evaluate its structural characteristics and to analyze its conformation and complexation properties, an inspection of the Cambridge Structural Database (CSD; Version 5.23 of April 2002; Allen, 2002) was performed. It revealed four structures of 1,3,6,9,11,14-hexathiacyclohexadecane derivatives and two structures of their metal complexes with Cu+ and Ag+. The structure of 7,10,13,20,23,26-hexathiadispiro[5.7.5.7]hexacosane (CSD refcode WEKXIT; Xianming et al., 1994) is the only spiro-derivative of 1,3,6,9,11,14-hexathiacyclohexadecane reported so far. The overall conformation of this compound shows remarkable similarity with (I). It also possesses two exodentate S atoms at the 'square' corners, and the gauche–anti arrangements are similar to (I). The C—C endocyclic linkages show even larger discrepancies from the values expected for Csp3—Csp3 bond lengths than those in (I). In contrast to these two spiro-derivatives, the structure of the unsubstituted 1,3,6,9,11,14-hexathiacyclohexadecane (CSD refcode KAVYIP) (De Groot & Loeb, 1989) has two crystallographically independent half molecules in the asymmetric unit, located around crystallographic inversion centres. Thus, their molecular symmetry is Ci in contrast to (I) and WEKXIT, where C1 symmetry was observed. The conformational features of trans-2,10-diphenyl-1,3,6,9,11,14-hexathiacyclohexadecane (CSD refcode WEKWUE; Xianming et al., 1994) are similar to the features of the unsubstituted KAVYIP but differ from the spiro derivatives WEKXIT and (I). The interatomic distances between the opposite endocyclic S atoms for the set of six 1,3,6,9,11,14-hexathiacyclohexadecane derivatives from the CSD and (I) are given in Table 1. (Refcode KAVYIP has two independent halves in the assymetric unit and hence two entries in Table 1.) The refcodes KAVYOV (De Groot & Loeb, 1989) and SOLHIK (De Groot & Loeb, 1991) correspond to the Cu+ and Ag+ complexes of KAVYIP, respectively. Four out of six S atoms are involved in the metal complexation in these structures, with a reduction of S···S distances compared with the ligand.
Complexation of a ligand with a metal ion causes 1H NMR shifts (Ishikawa et al., 1999). In order to prove the complexation of (I) with Ag+, an NMR titration experiment was performed. Ligand (I) was dissolved in CDCl3 and a solution of AgBF4 in CD3CN was added in molar amounts of 10%, 25%, 50%, 75%, 100%, 150% and 200%, respectively. As depicted in Fig. 2, the NMR chemical shifts gradually changed until 100% of the molar amount of AgBF4 was added, indicating the formation of the 1:1 complex. However, attempts to isolate and crystallize the complex were unsuccesful. In the 1H NMR spectra of complex Ag+[(I)], downfield shifts were observed for all H atoms except for the anti H3 atom (Fig. 2).