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Valdecoxib, C
16H
14N
2O
3S, is a non-steroidal anti-inflammatory drug containing a planar isoxazole heterocycle which is substituted at the C atoms with two aromatic rings and a methyl group. In addition to one molecule of valdecoxib, there is half a molecule of ethyl methyl ketone in the asymmetric unit of the title compound [systematic name: 4-(5-methyl-3-phenylisoxazol-4-yl)benzenesulfonamide ethyl methyl ketone hemisolvate],
viz. C
16H
14N
2O
3S·0.5C
4H
8O. The crystal packing is stabilized by N—H
O hydrogen bonds. Apart from the orientation of the sulfonamide group, the conformation of the title compound agrees well with that of the recently published orthorhombic polymorph which does not contain any solvent.
Supporting information
CCDC reference: 262490
Key indicators
- Single-crystal X-ray study
- T = 173 K
- Mean (C-C) = 0.003 Å
- Disorder in solvent or counterion
- R factor = 0.044
- wR factor = 0.131
- Data-to-parameter ratio = 14.6
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT305_ALERT_2_A Isolated Hydrogen Atom (Outside Bond Range ??) H2LA
| Author Response: There is a molecule disordered about a centre of inversion.
|
PLAT305_ALERT_2_A Isolated Hydrogen Atom (Outside Bond Range ??) H2LB
| Author Response: There is a molecule disordered about a centre of inversion.
|
PLAT305_ALERT_2_A Isolated Hydrogen Atom (Outside Bond Range ??) H2LC
| Author Response: There is a molecule disordered about a centre of inversion.
|
PLAT410_ALERT_2_A Short Intra H...H Contact H2LA .. H2LB .. 1.57 Ang.
PLAT410_ALERT_2_A Short Intra H...H Contact H2LA .. H2LC .. 1.57 Ang.
PLAT410_ALERT_2_A Short Intra H...H Contact H2LB .. H2LC .. 1.57 Ang.
PLAT773_ALERT_2_A Suspect C-C Bond in CIF: C1L -C2L .. 1.73 Ang.
| Author Response: There is a molecule disordered about a centre of inversion.
|
PLAT773_ALERT_2_A Suspect C-C Bond in CIF: C2L -C1L .. 1.73 Ang.
| Author Response: There is a molecule disordered about a centre of inversion.
|
PLAT780_ALERT_1_A Coordinates do not Form a Properly Connected Set ?
Alert level B
PLAT367_ALERT_2_B Long? C(sp?)-C(sp?) Bond C1L - C2L_d ... 1.73 Ang.
Alert level C
PLAT041_ALERT_1_C Calc. and Rep. SumFormula Strings Differ .... ?
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT045_ALERT_1_C Calculated and Reported Z Differ by ............ 0.50 Ratio
PLAT165_ALERT_3_C Nr. of Status R Flagged Non-Hydrogen Atoms ..... 2
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.15 Ratio
PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C23
PLAT302_ALERT_4_C Anion/Solvent Disorder ......................... 17.00 Perc.
PLAT313_ALERT_2_C Oxygen with three covalent bonds (rare) ........ O1L
PLAT366_ALERT_2_C Short? C(sp?)-C(sp?) Bond C1L - C1L_c ... 1.31 Ang.
PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 5
PLAT751_ALERT_4_C Bond Calc 1.30508, Rep 1.305(4) ...... Senseless su
C1L -C1L 1.555 3.565
PLAT751_ALERT_4_C Bond Calc 1.72763, Rep 1.727(6) ...... Senseless su
C1L -C2L 1.555 4.565
PLAT751_ALERT_4_C Bond Calc 1.72763, Rep 1.727(6) ...... Senseless su
C2L -C1L 1.555 4.566
9 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
13 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
13 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
5 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: X-AREA (Stoe & Cie, 2001); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP in SHELXTL-Plus (Sheldrick, 1991); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 1990).
4-(5-methyl-3-phenylisoxazol-4-yl)benzenesulfonamide ethyl methyl ketone
hemisolvate
top
Crystal data top
C16H14N2O3S·0.5C4H8O | F(000) = 736 |
Mr = 350.40 | Dx = 1.327 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 24673 reflections |
a = 13.0201 (14) Å | θ = 3.5–25.7° |
b = 7.7930 (5) Å | µ = 0.21 mm−1 |
c = 17.3305 (19) Å | T = 173 K |
β = 94.373 (9)° | Plate, colourless |
V = 1753.3 (3) Å3 | 0.40 × 0.37 × 0.14 mm |
Z = 4 | |
Data collection top
STOE IPDS-II two-circle diffractometer | 3345 independent reflections |
Radiation source: fine-focus sealed tube | 2768 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.057 |
ω scans | θmax = 25.8°, θmin = 3.5° |
Absorption correction: multi-scan (MULABS; Spek, 1990; Blessing, 1995) | h = −15→15 |
Tmin = 0.912, Tmax = 0.962 | k = −9→9 |
24057 measured reflections | l = −21→21 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.131 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0755P)2 + 0.4033P] where P = (Fo2 + 2Fc2)/3 |
3345 reflections | (Δ/σ)max = 0.001 |
229 parameters | Δρmax = 0.60 e Å−3 |
0 restraints | Δρmin = −0.56 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
S1 | 0.06511 (3) | 0.75708 (5) | 0.22545 (2) | 0.02823 (16) | |
N1 | −0.04516 (12) | 0.7592 (2) | 0.26081 (11) | 0.0339 (4) | |
H1A | −0.0598 (17) | 0.667 (3) | 0.2835 (13) | 0.037 (6)* | |
H1B | −0.053 (2) | 0.843 (4) | 0.2872 (15) | 0.052 (7)* | |
O11 | 0.07021 (10) | 0.60084 (16) | 0.18285 (7) | 0.0356 (3) | |
O12 | 0.07531 (10) | 0.91506 (16) | 0.18463 (7) | 0.0336 (3) | |
C1 | 0.40159 (14) | 0.7225 (2) | 0.48139 (10) | 0.0300 (4) | |
C2 | 0.50930 (14) | 0.7445 (2) | 0.47417 (11) | 0.0328 (4) | |
N3 | 0.56210 (14) | 0.7312 (2) | 0.54123 (10) | 0.0434 (4) | |
O4 | 0.48920 (12) | 0.7000 (2) | 0.59505 (8) | 0.0451 (4) | |
C5 | 0.39420 (15) | 0.6941 (3) | 0.55751 (11) | 0.0374 (4) | |
C51 | 0.30683 (19) | 0.6607 (3) | 0.60542 (12) | 0.0512 (5) | |
H51A | 0.2428 | 0.7019 | 0.5781 | 0.077* | |
H51B | 0.3184 | 0.7211 | 0.6549 | 0.077* | |
H51C | 0.3015 | 0.5372 | 0.6149 | 0.077* | |
C11 | 0.31684 (13) | 0.7340 (2) | 0.42022 (10) | 0.0292 (4) | |
C12 | 0.30512 (14) | 0.8795 (2) | 0.37443 (11) | 0.0339 (4) | |
H12 | 0.3504 | 0.9741 | 0.3840 | 0.041* | |
C13 | 0.22815 (13) | 0.8884 (2) | 0.31496 (10) | 0.0317 (4) | |
H13 | 0.2208 | 0.9878 | 0.2833 | 0.038* | |
C14 | 0.16212 (13) | 0.7510 (2) | 0.30212 (10) | 0.0278 (4) | |
C15 | 0.17113 (14) | 0.6062 (2) | 0.34832 (11) | 0.0349 (4) | |
H15 | 0.1243 | 0.5134 | 0.3398 | 0.042* | |
C16 | 0.24890 (14) | 0.5982 (2) | 0.40694 (11) | 0.0339 (4) | |
H16 | 0.2560 | 0.4987 | 0.4385 | 0.041* | |
C21 | 0.56250 (15) | 0.7697 (2) | 0.40305 (13) | 0.0381 (4) | |
C22 | 0.65232 (17) | 0.8662 (3) | 0.40405 (18) | 0.0588 (7) | |
H22 | 0.6798 | 0.9193 | 0.4505 | 0.071* | |
C23 | 0.7015 (2) | 0.8839 (4) | 0.3357 (3) | 0.0876 (12) | |
H23 | 0.7623 | 0.9513 | 0.3358 | 0.105* | |
C24 | 0.6641 (3) | 0.8065 (4) | 0.2689 (2) | 0.0806 (11) | |
H24 | 0.6989 | 0.8197 | 0.2230 | 0.097* | |
C25 | 0.5761 (2) | 0.7094 (4) | 0.26801 (15) | 0.0633 (7) | |
H25 | 0.5504 | 0.6547 | 0.2215 | 0.076* | |
C26 | 0.52496 (14) | 0.6907 (3) | 0.33418 (10) | 0.0439 (5) | |
H26 | 0.4639 | 0.6238 | 0.3330 | 0.053* | |
O1L | 0.11783 (14) | 0.9379 (3) | 0.49816 (10) | 0.1092 (18) | 0.50 |
C1L | 0.04893 (14) | 0.4843 (3) | −0.00214 (10) | 0.253 (6) | |
H1LA | 0.0904 | 0.9672 | 0.5397 | 0.303* | 0.50 |
H1LB | 0.0731 | 0.9823 | 0.4496 | 0.303* | 0.50 |
C2L | 0.0467 (5) | 0.2365 (7) | 0.5065 (3) | 0.138 (2) | |
H2LA | 0.1155 | 1.2793 | 0.5044 | 0.207* | |
H2LB | 0.0034 | 1.2840 | 0.4645 | 0.207* | |
H2LC | 0.0207 | 1.2689 | 0.5547 | 0.207* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0256 (3) | 0.0257 (3) | 0.0325 (3) | 0.00253 (15) | −0.00352 (17) | 0.00003 (15) |
N1 | 0.0251 (8) | 0.0273 (9) | 0.0489 (10) | 0.0009 (6) | −0.0009 (7) | 0.0009 (7) |
O11 | 0.0388 (7) | 0.0303 (7) | 0.0366 (7) | 0.0036 (5) | −0.0046 (5) | −0.0032 (5) |
O12 | 0.0339 (7) | 0.0300 (7) | 0.0363 (7) | 0.0028 (5) | −0.0016 (5) | 0.0044 (5) |
C1 | 0.0272 (9) | 0.0306 (9) | 0.0317 (8) | −0.0018 (7) | −0.0010 (7) | −0.0009 (7) |
C2 | 0.0267 (9) | 0.0330 (10) | 0.0377 (9) | −0.0020 (7) | −0.0040 (7) | 0.0005 (7) |
N3 | 0.0365 (9) | 0.0482 (10) | 0.0437 (9) | −0.0049 (7) | −0.0093 (7) | 0.0009 (7) |
O4 | 0.0463 (8) | 0.0535 (9) | 0.0335 (7) | −0.0018 (7) | −0.0096 (6) | 0.0018 (6) |
C5 | 0.0367 (10) | 0.0405 (10) | 0.0344 (9) | 0.0005 (8) | −0.0016 (7) | 0.0001 (8) |
C51 | 0.0541 (13) | 0.0597 (14) | 0.0411 (11) | 0.0054 (11) | 0.0132 (9) | 0.0077 (10) |
C11 | 0.0232 (8) | 0.0343 (9) | 0.0301 (8) | 0.0002 (7) | 0.0013 (7) | −0.0009 (7) |
C12 | 0.0287 (9) | 0.0325 (9) | 0.0398 (9) | −0.0062 (7) | −0.0016 (7) | 0.0020 (7) |
C13 | 0.0288 (9) | 0.0297 (9) | 0.0361 (9) | −0.0016 (7) | −0.0008 (7) | 0.0041 (7) |
C14 | 0.0221 (8) | 0.0295 (9) | 0.0313 (8) | 0.0019 (6) | −0.0005 (6) | −0.0010 (6) |
C15 | 0.0302 (9) | 0.0299 (9) | 0.0432 (10) | −0.0055 (7) | −0.0061 (8) | 0.0036 (7) |
C16 | 0.0314 (9) | 0.0315 (9) | 0.0375 (9) | −0.0029 (7) | −0.0053 (7) | 0.0065 (7) |
C21 | 0.0275 (9) | 0.0358 (10) | 0.0513 (11) | 0.0046 (7) | 0.0056 (8) | 0.0097 (8) |
C22 | 0.0351 (11) | 0.0439 (12) | 0.0995 (19) | −0.0040 (9) | 0.0189 (12) | −0.0026 (12) |
C23 | 0.0591 (17) | 0.0496 (15) | 0.163 (4) | 0.0019 (13) | 0.066 (2) | 0.0164 (19) |
C24 | 0.081 (2) | 0.0673 (18) | 0.101 (2) | 0.0298 (17) | 0.059 (2) | 0.0371 (18) |
C25 | 0.0616 (16) | 0.0811 (17) | 0.0497 (13) | 0.0335 (14) | 0.0197 (11) | 0.0238 (12) |
C26 | 0.0349 (10) | 0.0580 (13) | 0.0389 (10) | 0.0104 (9) | 0.0033 (8) | 0.0099 (9) |
O1L | 0.080 (3) | 0.128 (4) | 0.125 (4) | 0.030 (3) | 0.038 (3) | −0.007 (4) |
C1L | 0.139 (5) | 0.565 (18) | 0.054 (2) | −0.186 (9) | 0.003 (3) | −0.036 (5) |
C2L | 0.141 (5) | 0.159 (5) | 0.110 (4) | 0.033 (4) | −0.026 (3) | 0.014 (3) |
Geometric parameters (Å, º) top
S1—O11 | 1.4280 (13) | C14—C15 | 1.383 (2) |
S1—O12 | 1.4311 (13) | C15—C16 | 1.380 (2) |
S1—N1 | 1.6036 (18) | C15—H15 | 0.9500 |
S1—C14 | 1.7628 (18) | C16—H16 | 0.9500 |
N1—H1A | 0.85 (3) | C21—C22 | 1.389 (3) |
N1—H1B | 0.81 (3) | C21—C26 | 1.398 (3) |
C1—C5 | 1.348 (3) | C22—C23 | 1.395 (5) |
C1—C2 | 1.428 (3) | C22—H22 | 0.9500 |
C1—C11 | 1.473 (2) | C23—C24 | 1.363 (6) |
C2—N3 | 1.309 (3) | C23—H23 | 0.9500 |
C2—C21 | 1.472 (3) | C24—C25 | 1.372 (5) |
N3—O4 | 1.402 (2) | C24—H24 | 0.9500 |
O4—C5 | 1.354 (2) | C25—C26 | 1.377 (3) |
C5—C51 | 1.482 (3) | C25—H25 | 0.9500 |
C51—H51A | 0.9800 | C26—H26 | 0.9500 |
C51—H51B | 0.9800 | O1L—C1Li | 1.083 (2) |
C51—H51C | 0.9800 | O1L—H1LA | 0.8593 |
C11—C16 | 1.387 (3) | O1L—H1LB | 1.0461 |
C11—C12 | 1.386 (3) | C1L—O1Lii | 1.083 (2) |
C12—C13 | 1.383 (3) | C1L—C1Liii | 1.305 (4) |
C12—H12 | 0.9500 | C1L—C2Liv | 1.727 (6) |
C13—C14 | 1.380 (2) | C2L—C1Lv | 1.727 (6) |
C13—H13 | 0.9500 | | |
| | | |
O11—S1—O12 | 117.92 (8) | C12—C13—H13 | 120.4 |
O11—S1—N1 | 106.54 (9) | C13—C14—C15 | 121.00 (16) |
O12—S1—N1 | 107.43 (8) | C13—C14—S1 | 120.14 (13) |
O11—S1—C14 | 107.93 (8) | C15—C14—S1 | 118.85 (13) |
O12—S1—C14 | 107.92 (8) | C16—C15—C14 | 119.20 (17) |
N1—S1—C14 | 108.85 (9) | C16—C15—H15 | 120.4 |
S1—N1—H1A | 114.0 (15) | C14—C15—H15 | 120.4 |
S1—N1—H1B | 111.9 (19) | C15—C16—C11 | 120.71 (17) |
H1A—N1—H1B | 113 (2) | C15—C16—H16 | 119.6 |
C5—C1—C2 | 104.43 (16) | C11—C16—H16 | 119.6 |
C5—C1—C11 | 127.49 (17) | C22—C21—C26 | 119.2 (2) |
C2—C1—C11 | 128.05 (16) | C22—C21—C2 | 120.7 (2) |
N3—C2—C1 | 111.46 (17) | C26—C21—C2 | 119.98 (17) |
N3—C2—C21 | 120.34 (18) | C21—C22—C23 | 118.9 (3) |
C1—C2—C21 | 128.12 (17) | C21—C22—H22 | 120.6 |
C2—N3—O4 | 105.55 (16) | C23—C22—H22 | 120.6 |
C5—O4—N3 | 109.05 (14) | C24—C23—C22 | 121.4 (3) |
C1—C5—O4 | 109.51 (17) | C24—C23—H23 | 119.3 |
C1—C5—C51 | 133.80 (19) | C22—C23—H23 | 119.3 |
O4—C5—C51 | 116.69 (17) | C23—C24—C25 | 119.8 (3) |
C5—C51—H51A | 109.5 | C23—C24—H24 | 120.1 |
C5—C51—H51B | 109.5 | C25—C24—H24 | 120.1 |
H51A—C51—H51B | 109.5 | C24—C25—C26 | 120.4 (3) |
C5—C51—H51C | 109.5 | C24—C25—H25 | 119.8 |
H51A—C51—H51C | 109.5 | C26—C25—H25 | 119.8 |
H51B—C51—H51C | 109.5 | C25—C26—C21 | 120.3 (2) |
C16—C11—C12 | 119.22 (16) | C25—C26—H26 | 119.8 |
C16—C11—C1 | 120.39 (16) | C21—C26—H26 | 119.8 |
C12—C11—C1 | 120.38 (16) | C1Li—O1L—H1LA | 57.2 |
C13—C12—C11 | 120.61 (17) | C1Li—O1L—H1LB | 53.1 |
C13—C12—H12 | 119.7 | H1LA—O1L—H1LB | 110.2 |
C11—C12—H12 | 119.7 | O1Lii—C1L—C1Liii | 134.9 (4) |
C14—C13—C12 | 119.24 (16) | O1Lii—C1L—C2Liv | 125.3 (3) |
C14—C13—H13 | 120.4 | C1Liii—C1L—C2Liv | 99.2 (3) |
| | | |
C5—C1—C2—N3 | −0.4 (2) | O12—S1—C14—C13 | 2.30 (17) |
C11—C1—C2—N3 | 177.69 (18) | N1—S1—C14—C13 | −114.00 (15) |
C5—C1—C2—C21 | 176.34 (18) | O11—S1—C14—C15 | −48.70 (16) |
C11—C1—C2—C21 | −5.6 (3) | O12—S1—C14—C15 | −177.15 (14) |
C1—C2—N3—O4 | −0.1 (2) | N1—S1—C14—C15 | 66.55 (16) |
C21—C2—N3—O4 | −177.13 (16) | C13—C14—C15—C16 | −1.5 (3) |
C2—N3—O4—C5 | 0.6 (2) | S1—C14—C15—C16 | 177.99 (15) |
C2—C1—C5—O4 | 0.8 (2) | C14—C15—C16—C11 | 0.7 (3) |
C11—C1—C5—O4 | −177.35 (17) | C12—C11—C16—C15 | 0.8 (3) |
C2—C1—C5—C51 | −179.8 (2) | C1—C11—C16—C15 | −178.15 (17) |
C11—C1—C5—C51 | 2.1 (4) | N3—C2—C21—C22 | −34.5 (3) |
N3—O4—C5—C1 | −0.9 (2) | C1—C2—C21—C22 | 149.0 (2) |
N3—O4—C5—C51 | 179.58 (18) | N3—C2—C21—C26 | 143.0 (2) |
C5—C1—C11—C16 | −58.0 (3) | C1—C2—C21—C26 | −33.5 (3) |
C2—C1—C11—C16 | 124.4 (2) | C26—C21—C22—C23 | 1.1 (3) |
C5—C1—C11—C12 | 123.1 (2) | C2—C21—C22—C23 | 178.6 (2) |
C2—C1—C11—C12 | −54.5 (3) | C21—C22—C23—C24 | −1.1 (4) |
C16—C11—C12—C13 | −1.5 (3) | C22—C23—C24—C25 | 0.3 (5) |
C1—C11—C12—C13 | 177.46 (17) | C23—C24—C25—C26 | 0.5 (4) |
C11—C12—C13—C14 | 0.7 (3) | C24—C25—C26—C21 | −0.4 (4) |
C12—C13—C14—C15 | 0.8 (3) | C22—C21—C26—C25 | −0.4 (3) |
C12—C13—C14—S1 | −178.65 (14) | C2—C21—C26—C25 | −177.97 (19) |
O11—S1—C14—C13 | 130.75 (15) | | |
Symmetry codes: (i) x, −y+3/2, z+1/2; (ii) x, −y+3/2, z−1/2; (iii) −x, −y+1, −z; (iv) x, −y+1/2, z−1/2; (v) x, −y+1/2, z+1/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O12vi | 0.85 (3) | 2.05 (3) | 2.881 (2) | 165 (2) |
N1—H1B···O11vii | 0.81 (3) | 2.09 (3) | 2.863 (2) | 160 (3) |
Symmetry codes: (vi) −x, y−1/2, −z+1/2; (vii) −x, y+1/2, −z+1/2. |
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