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The title compound, C17H27N3O2+·2I·H2O, was synthesized from 1-(2-morpholinoethyl)benzimidazole and ethyl iodide in dimethyl­formamide. In the molecule, the benzimidazole ring is connected to the morpholine ring by an ethyl­ene group. The crystal structure is stabilized by inter- and intramolecular O—H...I, C—H...O and C—H...I interactions.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S160053680403301X/su6148sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S160053680403301X/su6148Isup2.hkl
Contains datablock I

CCDC reference: 263685

Key indicators

  • Single-crystal X-ray study
  • T = 100 K
  • Mean [sigma](C-C) = 0.004 Å
  • R factor = 0.025
  • wR factor = 0.056
  • Data-to-parameter ratio = 18.0

checkCIF/PLATON results

No syntax errors found



Alert level C PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.96 PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT432_ALERT_2_C Short Inter X...Y Contact C5 .. C5 .. 3.15 Ang.
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion

Computing details top

Data collection: X-AREA (Stoe & Cie, 2002); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).

3-Ethyl-1-[2-(1-ethylmorpholinium-1-yl)ethyl]benzimidazolium diiodide monohydrate top
Crystal data top
C17H27N3O2+·2I·H2OF(000) = 1096
Mr = 561.23Dx = 1.761 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 22695 reflections
a = 7.527 (5) Åθ = 1.6–26.0°
b = 24.889 (5) ŵ = 2.99 mm1
c = 11.757 (5) ÅT = 100 K
β = 106.007 (5)°Prism, colorless
V = 2117.2 (17) Å30.45 × 0.32 × 0.17 mm
Z = 4
Data collection top
Stoe IPDS-II
diffractometer
4039 independent reflections
Radiation source: sealed X-ray tube, 12 x 0.4 mm long-fine focus3870 reflections with I > 2σ(I)
Plane graphite monochromatorRint = 0.096
Detector resolution: 6.67 pixels mm-1θmax = 26.0°, θmin = 1.6°
ω scansh = 99
Absorption correction: integration
STOE X-RED32 (Stoe & Cie, 2002)
k = 3030
Tmin = 0.347, Tmax = 0.631l = 1414
23081 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.025Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.057H atoms treated by a mixture of independent and constrained refinement
S = 1.09 w = 1/[σ2(Fo2) + (0.0084P)2 + 1.9938P]
where P = (Fo2 + 2Fc2)/3
4039 reflections(Δ/σ)max = 0.001
225 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = 0.82 e Å3
Special details top

Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles

Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.1811 (3)0.23516 (7)0.35297 (19)0.0242 (6)
N10.4164 (3)0.41372 (7)0.1550 (2)0.0156 (6)
N20.1894 (3)0.39741 (8)0.0024 (2)0.0158 (6)
N30.0272 (3)0.32464 (8)0.2926 (2)0.0159 (6)
C10.3618 (3)0.46299 (9)0.0991 (2)0.0157 (7)
C20.4291 (4)0.51467 (9)0.1320 (3)0.0176 (7)
C30.3465 (4)0.55517 (9)0.0553 (3)0.0195 (7)
C40.2039 (4)0.54525 (9)0.0481 (2)0.0182 (7)
C50.1364 (4)0.49350 (9)0.0795 (2)0.0171 (7)
C60.2198 (3)0.45306 (9)0.0012 (2)0.0153 (7)
C70.3093 (3)0.37603 (9)0.0919 (2)0.0160 (7)
C80.5647 (4)0.40734 (9)0.2648 (3)0.0188 (7)
C90.5949 (4)0.34927 (10)0.3022 (3)0.0294 (9)
C100.0457 (4)0.36712 (9)0.0880 (2)0.0175 (7)
C110.1078 (3)0.35798 (9)0.1994 (2)0.0157 (7)
C120.0420 (4)0.26669 (9)0.2536 (2)0.0185 (7)
C130.1336 (4)0.23501 (9)0.2433 (3)0.0211 (7)
C140.2142 (4)0.28894 (9)0.3849 (3)0.0211 (8)
C150.0397 (4)0.32216 (10)0.4031 (2)0.0194 (7)
C160.2235 (3)0.34734 (10)0.3248 (3)0.0207 (8)
C170.2392 (4)0.40547 (10)0.3656 (3)0.0261 (8)
O20.1875 (3)0.46689 (8)0.6522 (2)0.0285 (6)
I10.60840 (2)0.21087 (1)0.46018 (2)0.0185 (1)
I20.12463 (2)0.42060 (1)0.36116 (2)0.0221 (1)
H20.522900.521300.200800.0210*
H30.386900.590300.072800.0230*
H40.153000.573900.097000.0220*
H50.042200.486600.147900.0210*
H70.316700.339700.110700.0190*
H8A0.534200.427700.327200.0230*
H8B0.678300.421900.253800.0230*
H9A0.692800.346900.374400.0440*
H9B0.627800.329100.241500.0440*
H9C0.483400.334900.314600.0440*
H10A0.069500.387100.107300.0210*
H10B0.025400.332900.054200.0210*
H11A0.124100.392600.233300.0190*
H11B0.226800.340000.177800.0190*
H12A0.069200.266700.177600.0220*
H12B0.143800.249200.310400.0220*
H13A0.233900.250600.181900.0250*
H13B0.116500.198300.220800.0250*
H14A0.252500.288600.457200.0250*
H14B0.312900.304800.322900.0250*
H15A0.056800.306800.467200.0230*
H15B0.063300.358400.425900.0230*
H16A0.301200.325400.387100.0250*
H16B0.271000.344400.256200.0250*
H17A0.366000.416600.384100.0390*
H17B0.195800.408700.434800.0390*
H17C0.165700.427800.303700.0390*
H2A0.173 (6)0.4568 (15)0.573 (4)0.042 (11)*
H2B0.108 (8)0.491 (2)0.632 (6)0.087 (19)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0326 (11)0.0129 (8)0.0285 (12)0.0035 (7)0.0110 (9)0.0032 (8)
N10.0189 (10)0.0116 (8)0.0164 (12)0.0003 (7)0.0049 (9)0.0002 (8)
N20.0189 (10)0.0113 (9)0.0174 (11)0.0026 (8)0.0056 (9)0.0029 (8)
N30.0188 (10)0.0126 (9)0.0159 (11)0.0014 (7)0.0041 (9)0.0003 (8)
C10.0175 (12)0.0136 (10)0.0184 (13)0.0002 (9)0.0088 (10)0.0008 (9)
C20.0186 (12)0.0150 (10)0.0208 (14)0.0012 (9)0.0081 (11)0.0019 (10)
C30.0246 (13)0.0129 (10)0.0253 (15)0.0003 (9)0.0139 (12)0.0010 (10)
C40.0215 (12)0.0156 (11)0.0209 (14)0.0043 (9)0.0117 (11)0.0014 (10)
C50.0168 (11)0.0191 (11)0.0172 (13)0.0010 (9)0.0078 (10)0.0000 (10)
C60.0173 (11)0.0131 (10)0.0181 (13)0.0013 (9)0.0095 (10)0.0011 (9)
C70.0183 (12)0.0120 (10)0.0200 (14)0.0007 (9)0.0090 (10)0.0004 (9)
C80.0192 (12)0.0178 (11)0.0180 (14)0.0015 (9)0.0026 (11)0.0004 (10)
C90.0364 (16)0.0202 (12)0.0241 (16)0.0029 (11)0.0042 (13)0.0042 (11)
C100.0172 (12)0.0174 (10)0.0185 (14)0.0040 (9)0.0060 (10)0.0044 (10)
C110.0176 (12)0.0125 (10)0.0178 (13)0.0006 (8)0.0062 (10)0.0003 (9)
C120.0243 (13)0.0115 (10)0.0188 (14)0.0040 (9)0.0047 (11)0.0001 (9)
C130.0235 (13)0.0124 (10)0.0257 (15)0.0011 (9)0.0041 (11)0.0010 (10)
C140.0233 (13)0.0167 (11)0.0250 (15)0.0012 (9)0.0097 (12)0.0023 (10)
C150.0267 (13)0.0177 (11)0.0143 (13)0.0006 (10)0.0065 (11)0.0007 (10)
C160.0153 (12)0.0209 (12)0.0241 (15)0.0017 (9)0.0022 (10)0.0028 (11)
C170.0246 (14)0.0222 (12)0.0286 (17)0.0048 (10)0.0023 (12)0.0018 (11)
O20.0370 (12)0.0245 (9)0.0221 (12)0.0004 (9)0.0052 (10)0.0004 (8)
I10.0195 (1)0.0135 (1)0.0219 (1)0.0004 (1)0.0046 (1)0.0012 (1)
I20.0263 (1)0.0202 (1)0.0217 (1)0.0017 (1)0.0099 (1)0.0008 (1)
Geometric parameters (Å, º) top
O1—C131.430 (4)C3—H30.9300
O1—C141.431 (3)C4—H40.9300
O2—H2B0.83 (6)C5—H50.9300
O2—H2A0.94 (4)C7—H70.9300
N1—C71.323 (3)C8—H8B0.9700
N1—C11.398 (3)C8—H8A0.9700
N1—C81.464 (4)C9—H9B0.9600
N2—C101.467 (4)C9—H9A0.9600
N2—C71.332 (3)C9—H9C0.9600
N2—C61.403 (3)C10—H10B0.9700
N3—C111.519 (3)C10—H10A0.9700
N3—C161.529 (4)C11—H11B0.9700
N3—C121.527 (3)C11—H11A0.9700
N3—C151.519 (4)C12—H12B0.9700
C1—C61.378 (3)C12—H12A0.9700
C1—C21.397 (3)C13—H13A0.9700
C2—C31.381 (4)C13—H13B0.9700
C3—C41.404 (4)C14—H14B0.9700
C4—C51.396 (3)C14—H14A0.9700
C5—C61.391 (3)C15—H15B0.9700
C8—C91.510 (4)C15—H15A0.9700
C10—C111.524 (4)C16—H16B0.9700
C12—C131.515 (4)C16—H16A0.9700
C14—C151.516 (4)C17—H17C0.9600
C16—C171.519 (4)C17—H17A0.9600
C2—H20.9300C17—H17B0.9600
I1···C7i3.751 (3)C17···H10A2.9900
I2···C83.799 (4)C17···H11A2.7700
I2···O23.517 (3)C17···H15B2.8200
I2···N13.696 (3)H2···C82.9300
I2···O2ii3.631 (3)H2···O2x2.4000
I1···H11Bi3.1500H2A···I22.58 (4)
I1···H12Aiii3.3200H2A···H15Bvii2.5900
I1···H16Biii3.2300H2B···I2ii2.83 (6)
I1···H12Biv2.9800H3···I1xiii3.0300
I1···H13Ai3.0100H3···H10Aviii2.5900
I1···H3v3.0300H4···I2viii3.2300
I1···H10Biii3.3700H4···H8Bxi2.5100
I1···H16Aiv3.3400H5···O2xii2.8900
I2···H8A3.2200H5···C103.0500
I2···H8Bvi3.2500H5···H17C2.5200
I2···H13Bi3.1100H7···C92.6300
I2···H15Bvii3.0800H7···H9B2.4400
I2···H2A2.58 (4)H7···H9C2.3800
I2···H2Bii2.83 (6)H7···H10B2.5000
I2···H4viii3.2300H7···O1i2.2200
O1···N32.922 (4)H7···C13i3.1000
O1···C7ix3.059 (4)H8A···I23.2200
O2···C5vii3.348 (4)H8A···C23.0900
O2···C11vii3.366 (4)H8B···I2xiv3.2500
O2···I23.517 (3)H8B···C23.0700
O2···C2x3.307 (5)H8B···C4xi2.9100
O2···I2ii3.631 (3)H8B···H4xi2.5100
O1···H7ix2.2200H9A···H15Aiv2.4700
O1···H10Bix2.8800H9B···C72.8100
O2···H2x2.4000H9B···H72.4400
O2···H11Avii2.4100H9C···C72.7800
O2···H5vii2.8900H9C···H72.3800
N1···I23.696 (3)H9C···C13i3.0700
N1···N22.183 (4)H10A···H17C2.4400
N2···N12.183 (4)H10A···C53.0400
N3···O12.922 (4)H10A···C162.6900
C1···C4xi3.488 (4)H10A···C172.9900
C1···C3xi3.243 (5)H10A···H16B2.2400
C1···C2xi3.539 (5)H10A···H3viii2.5900
C2···C3xi3.574 (5)H10A···C3viii2.7400
C2···C4xi3.512 (5)H10A···C4viii2.8700
C2···C5xi3.497 (5)H10B···O1i2.8800
C2···C6xi3.498 (5)H10B···C122.8000
C2···O2x3.307 (5)H10B···H72.5000
C2···C1xi3.539 (5)H10B···H12A2.1800
C3···C1xi3.243 (5)H10B···I1xv3.3700
C3···C6xi3.500 (5)H11A···C63.0200
C3···C2xi3.574 (5)H11A···O2xii2.4100
C4···C2xi3.512 (5)H11A···C53.0800
C4···C1xi3.488 (4)H11A···H17C2.2800
C4···C10viii3.536 (4)H11A···C172.7700
C4···C5viii3.444 (5)H11A···H15B2.3400
C4···C6viii3.395 (4)H11B···C132.7600
C5···C5viii3.152 (5)H11B···H14B2.1700
C5···C6viii3.356 (4)H11B···C142.7200
C5···O2xii3.348 (4)H11B···H13A2.2300
C5···C2xi3.497 (5)H11B···I1ix3.1500
C5···C4viii3.444 (5)H12A···I1xv3.3200
C6···C4viii3.395 (4)H12A···C102.7600
C6···C5viii3.356 (4)H12A···H10B2.1800
C6···C2xi3.498 (5)H12A···H16B2.4800
C6···C3xi3.500 (5)H12B···H15A2.5600
C7···O1i3.059 (4)H12B···I1xvi2.9800
C7···I1ix3.751 (3)H12B···H16A2.2900
C8···I23.799 (4)H13A···C112.8200
C10···C173.507 (5)H13A···H11B2.2300
C10···C4viii3.536 (4)H13A···H14B2.3400
C11···O2xii3.366 (4)H13A···I1ix3.0100
C17···C103.507 (5)H13B···I2ix3.1100
C2···H8B3.0700H14B···C112.7300
C2···H8A3.0900H14B···H11B2.1700
C3···H10Aviii2.7400H14B···H13A2.3400
C4···H10Aviii2.8700H15A···H9Axvi2.4700
C4···H8Bxi2.9100H15A···H12B2.5600
C5···H11A3.0800H15A···H16A2.3300
C5···H10A3.0400H15B···I2xii3.0800
C6···H11A3.0200H15B···C172.8200
C7···H9C2.7800H15B···H2Axii2.5900
C7···H9B2.8100H15B···H11A2.3400
C8···H22.9300H15B···H17B2.3000
C9···H72.6300H16A···I1xvi3.3400
C10···H16B2.7000H16A···H12B2.2900
C10···H53.0500H16A···H15A2.3300
C10···H12A2.7600H16B···C102.7000
C10···H17C3.0000H16B···H10A2.2400
C11···H13A2.8200H16B···H12A2.4800
C11···H14B2.7300H16B···I1xv3.2300
C11···H17C2.7100H17B···C152.7500
C12···H10B2.8000H17B···H15B2.3000
C13···H9Cix3.0700H17C···C103.0000
C13···H11B2.7600H17C···C112.7100
C13···H7ix3.1000H17C···H52.5200
C14···H11B2.7200H17C···H10A2.4400
C15···H17B2.7500H17C···H11A2.2800
C16···H10A2.6900
C13—O1—C14110.1 (2)C8—C9—H9A109.00
H2A—O2—H2B92 (5)C8—C9—H9C109.00
C1—N1—C8124.29 (19)H9A—C9—H9B109.00
C7—N1—C8128.03 (19)H9A—C9—H9C109.00
C1—N1—C7107.7 (2)H9B—C9—H9C110.00
C6—N2—C7108.3 (2)C8—C9—H9B109.00
C6—N2—C10127.0 (2)N2—C10—H10B110.00
C7—N2—C10124.6 (2)C11—C10—H10A110.00
C11—N3—C12112.90 (19)N2—C10—H10A110.00
C11—N3—C15109.0 (2)H10A—C10—H10B108.00
C12—N3—C15106.70 (18)C11—C10—H10B110.00
C12—N3—C16106.1 (2)N3—C11—H11A109.00
C15—N3—C16109.2 (2)N3—C11—H11B109.00
C11—N3—C16112.66 (19)C10—C11—H11B109.00
N1—C1—C6107.6 (2)H11A—C11—H11B108.00
C2—C1—C6122.6 (2)C10—C11—H11A109.00
N1—C1—C2129.8 (2)N3—C12—H12B109.00
C1—C2—C3115.3 (3)C13—C12—H12A109.00
C2—C3—C4122.4 (2)C13—C12—H12B109.00
C3—C4—C5121.8 (2)H12A—C12—H12B108.00
C4—C5—C6115.3 (2)N3—C12—H12A109.00
N2—C6—C1105.8 (2)O1—C13—H13A109.00
C1—C6—C5122.6 (2)C12—C13—H13A110.00
N2—C6—C5131.7 (2)C12—C13—H13B109.00
N1—C7—N2110.6 (2)O1—C13—H13B109.00
N1—C8—C9112.2 (2)H13A—C13—H13B108.00
N2—C10—C11108.9 (2)O1—C14—H14B110.00
N3—C11—C10113.5 (2)C15—C14—H14A110.00
N3—C12—C13112.4 (2)O1—C14—H14A110.00
O1—C13—C12110.9 (2)H14A—C14—H14B108.00
O1—C14—C15109.9 (2)C15—C14—H14B110.00
N3—C15—C14112.3 (2)N3—C15—H15A109.00
N3—C16—C17114.6 (2)C14—C15—H15A109.00
C3—C2—H2122.00C14—C15—H15B109.00
C1—C2—H2122.00H15A—C15—H15B108.00
C4—C3—H3119.00N3—C15—H15B109.00
C2—C3—H3119.00N3—C16—H16A109.00
C3—C4—H4119.00C17—C16—H16A109.00
C5—C4—H4119.00C17—C16—H16B109.00
C6—C5—H5122.00N3—C16—H16B109.00
C4—C5—H5122.00H16A—C16—H16B108.00
N1—C7—H7125.00C16—C17—H17B109.00
N2—C7—H7125.00C16—C17—H17C109.00
N1—C8—H8B109.00C16—C17—H17A109.00
C9—C8—H8A109.00H17A—C17—H17C110.00
N1—C8—H8A109.00H17B—C17—H17C110.00
H8A—C8—H8B108.00H17A—C17—H17B109.00
C9—C8—H8B109.00
C14—O1—C13—C1261.5 (3)C12—N3—C16—C17179.6 (2)
C13—O1—C14—C1562.3 (3)C16—N3—C11—C1053.8 (3)
C7—N1—C1—C61.1 (3)C16—N3—C15—C14167.2 (2)
C8—N1—C1—C20.5 (4)C15—N3—C11—C10175.14 (19)
C1—N1—C8—C9178.7 (2)C16—N3—C12—C13168.0 (2)
C8—N1—C1—C6179.8 (2)C15—N3—C16—C1765.7 (3)
C8—N1—C7—N2179.7 (3)C15—N3—C12—C1351.6 (3)
C7—N1—C8—C92.4 (4)C11—N3—C12—C1368.1 (3)
C1—N1—C7—N20.7 (3)C2—C1—C6—N2178.7 (2)
C7—N1—C1—C2178.6 (3)N1—C1—C2—C3178.8 (3)
C7—N2—C10—C11102.9 (3)N1—C1—C6—C5178.2 (2)
C10—N2—C7—N1177.3 (2)C6—C1—C2—C31.6 (4)
C6—N2—C10—C1180.4 (3)C2—C1—C6—C52.1 (4)
C7—N2—C6—C5178.5 (3)N1—C1—C6—N21.0 (3)
C10—N2—C6—C54.4 (4)C1—C2—C3—C40.5 (5)
C10—N2—C6—C1176.5 (2)C2—C3—C4—C50.2 (5)
C6—N2—C7—N10.0 (3)C3—C4—C5—C60.2 (4)
C7—N2—C6—C10.7 (3)C4—C5—C6—N2179.7 (3)
C11—N3—C15—C1469.3 (2)C4—C5—C6—C11.3 (4)
C12—N3—C15—C1452.9 (3)N2—C10—C11—N3177.39 (18)
C12—N3—C11—C1066.5 (3)N3—C12—C13—O157.3 (3)
C11—N3—C16—C1755.6 (3)O1—C14—C15—N359.7 (3)
Symmetry codes: (i) x, y+1/2, z+1/2; (ii) x, y+1, z+1; (iii) x+1, y+1/2, z+1/2; (iv) x+1, y, z+1; (v) x+1, y1/2, z+1/2; (vi) x1, y, z; (vii) x, y, z+1; (viii) x, y+1, z; (ix) x, y+1/2, z1/2; (x) x+1, y+1, z+1; (xi) x+1, y+1, z; (xii) x, y, z1; (xiii) x+1, y+1/2, z+1/2; (xiv) x+1, y, z; (xv) x1, y+1/2, z1/2; (xvi) x1, y, z1.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O2—H2A···I20.94 (4)2.58 (4)3.517 (3)175 (4)
O2—H2B···I2ii0.83 (6)2.83 (6)3.631 (3)162 (6)
C2—H2···O2x0.932.403.307 (5)166
C3—H3···I1xiii0.933.033.899 (3)157
C7—H7···O1i0.932.223.059 (4)149
C11—H11A···O2xii0.972.413.366 (4)168
C12—H12B···I1xvi0.972.983.911 (4)161
C13—H13A···I1ix0.973.013.949 (4)163
Symmetry codes: (i) x, y+1/2, z+1/2; (ii) x, y+1, z+1; (ix) x, y+1/2, z1/2; (x) x+1, y+1, z+1; (xii) x, y, z1; (xiii) x+1, y+1/2, z+1/2; (xvi) x1, y, z1.
 

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