A three-dimensional anionic framework built up from [ZnO4] tetrahedra and planar [BO3] groups, stabilized by H atoms, has been found for hydrogen zinc oxide borate, H[Zn6O2(BO3)3]. Boron and one of the borate O atoms are on 18e (2) positions. Triple units of [ZnO4] tetrahedra sharing a common oxygen vertex on a 12c (3) site and strong asymmetrical linear hydrogen bonds with the H atom [on a 12c (3) position] disordered over a twofold axis are specific structural features of this zincoborate. There is evidence that the reported Zn4O(BO3)2 [Harrison, Gier & Stuky (1993). Angew. Chem. Int. Ed. Engl. 32, 724-726] corresponds to this structure.
Supporting information
Colourless crystals of H[Zn6O2(BO3)3] with rhombohedral shape up to 1 mm large were formed by hydrothermal synthesis in the system ZnO–B2O3–NaBr–H2O (at a temperature of 553 K and pressure of 70 bar, for a period of 20 days, with a ZnO/B2O3/NaBr/H2O ratio of 2:2:1:30) in a PTFE-lined stainless steel autoclave. The presence of Zn in the samples was confirmed by qualitative X-ray spectral analysis.
For the disordered H atom, localized on a 12c position close to 6a, the z parameter and the isotropic displacement parameter were refined without any constraints. No significant correlations were observed for these parameters and the refinement converged well.
Data collection: Win-Xpose in X-AREA (Stoe & Cie, 2000); cell refinement: Win-Cell in X-AREA; data reduction: Win-Integrate in X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: DIAMOND (Brandenburg 2006).
zinc hydrogen borate oxide
top
Crystal data top
H[Zn6O2(BO3)3] | Dx = 3.976 Mg m−3 |
Mr = 601.66 | Mo Kα radiation, λ = 0.71073 Å |
Trigonal, R3c | Cell parameters from 4205 reflections |
a = 8.1558 (5) Å | θ = 2.3–32.0° |
c = 26.171 (4) Å | µ = 14.14 mm−1 |
V = 1507.6 (3) Å3 | T = 193 K |
Z = 6 | Rhombohedron, colourless |
F(000) = 1704 | 0.22 × 0.15 × 0.15 mm |
Data collection top
Stoe IPDS-II diffractometer | 541 independent reflections |
Radiation source: fine-focus sealed tube | 516 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
Detector resolution: 6.7 pixels mm-1 | θmax = 31.0°, θmin = 3.3° |
ω scans | h = −11→11 |
Absorption correction: multi-scan (Blessing 1995) | k = −11→11 |
Tmin = 0.047, Tmax = 0.104 | l = −37→31 |
3364 measured reflections | |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.019 | All H-atom parameters refined |
wR(F2) = 0.044 | w = 1/[σ2(Fo2) + (0.020P)2 + 4.P] where P = (Fo2 + 2Fc2)/3 |
S = 1.25 | (Δ/σ)max < 0.001 |
541 reflections | Δρmax = 0.56 e Å−3 |
35 parameters | Δρmin = −0.72 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.00133 (9) |
Crystal data top
H[Zn6O2(BO3)3] | Z = 6 |
Mr = 601.66 | Mo Kα radiation |
Trigonal, R3c | µ = 14.14 mm−1 |
a = 8.1558 (5) Å | T = 193 K |
c = 26.171 (4) Å | 0.22 × 0.15 × 0.15 mm |
V = 1507.6 (3) Å3 | |
Data collection top
Stoe IPDS-II diffractometer | 541 independent reflections |
Absorption correction: multi-scan (Blessing 1995) | 516 reflections with I > 2σ(I) |
Tmin = 0.047, Tmax = 0.104 | Rint = 0.026 |
3364 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.019 | 0 restraints |
wR(F2) = 0.044 | All H-atom parameters refined |
S = 1.25 | Δρmax = 0.56 e Å−3 |
541 reflections | Δρmin = −0.72 e Å−3 |
35 parameters | |
Special details top
Experimental. X-ray spectral analysis: CamScan 4DV + EDA Link AN 1000 |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
Zn1 | 0.39230 (3) | 0.22346 (3) | 0.028616 (9) | 0.01285 (11) | |
O1 | 0.6667 | 0.3333 | 0.03652 (11) | 0.0138 (5) | |
O2 | 0.3129 (3) | 0.3333 | 0.0833 | 0.0155 (4) | |
O3 | 0.3163 (2) | 0.2652 (2) | −0.03807 (6) | 0.0158 (3) | |
B1 | 0.1447 (4) | 0.3333 | 0.0833 | 0.0141 (6) | |
H1 | 0.6667 | 0.3333 | 0.068 (6) | 0.06 (5)* | 0.50 |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Zn1 | 0.01286 (14) | 0.01287 (15) | 0.01293 (14) | 0.00651 (10) | −0.00054 (8) | −0.00053 (7) |
O1 | 0.0126 (7) | 0.0126 (7) | 0.0163 (11) | 0.0063 (3) | 0.000 | 0.000 |
O2 | 0.0143 (7) | 0.0184 (10) | 0.0150 (9) | 0.0092 (5) | −0.0023 (4) | −0.0045 (8) |
O3 | 0.0211 (7) | 0.0193 (7) | 0.0120 (6) | 0.0139 (6) | −0.0007 (5) | −0.0001 (5) |
B1 | 0.0136 (10) | 0.0126 (13) | 0.0158 (13) | 0.0063 (7) | −0.0003 (5) | −0.0006 (10) |
Geometric parameters (Å, º) top
Zn1—O3 | 1.9383 (15) | O1—H1 | 0.82 (16) |
Zn1—O3i | 1.9565 (16) | O2—B1 | 1.372 (4) |
Zn1—O1 | 1.9616 (4) | O2—Zn1v | 1.9630 (13) |
Zn1—O2 | 1.9630 (13) | O3—B1i | 1.378 (2) |
Zn1—Zn1i | 3.1576 (4) | O3—Zn1ii | 1.9565 (16) |
Zn1—Zn1ii | 3.1576 (4) | B1—O3vi | 1.378 (2) |
O1—Zn1iii | 1.9616 (4) | B1—O3ii | 1.378 (2) |
O1—Zn1iv | 1.9616 (4) | | |
| | | |
O3—Zn1—O3i | 106.38 (8) | Zn1iii—O1—Zn1iv | 118.90 (3) |
O3—Zn1—O1 | 113.99 (9) | Zn1iii—O1—Zn1 | 118.90 (3) |
O3i—Zn1—O1 | 109.88 (5) | Zn1iv—O1—Zn1 | 118.90 (3) |
O3—Zn1—O2 | 111.66 (7) | Zn1iii—O1—H1 | 96.05 (8) |
O3i—Zn1—O2 | 108.86 (5) | Zn1iv—O1—H1 | 96.05 (9) |
O1—Zn1—O2 | 106.02 (9) | Zn1—O1—H1 | 96.05 (9) |
O3—Zn1—Zn1i | 74.65 (5) | B1—O2—Zn1v | 123.93 (5) |
O3i—Zn1—Zn1i | 35.64 (4) | B1—O2—Zn1 | 123.93 (5) |
O1—Zn1—Zn1i | 109.44 (4) | Zn1v—O2—Zn1 | 112.14 (11) |
O2—Zn1—Zn1i | 137.08 (3) | B1i—O3—Zn1 | 125.50 (15) |
O3—Zn1—Zn1ii | 36.03 (5) | B1i—O3—Zn1ii | 125.21 (14) |
O3i—Zn1—Zn1ii | 117.91 (5) | Zn1—O3—Zn1ii | 108.33 (7) |
O1—Zn1—Zn1ii | 128.76 (5) | O2—B1—O3vi | 120.23 (14) |
O2—Zn1—Zn1ii | 75.69 (5) | O2—B1—O3ii | 120.23 (14) |
Zn1i—Zn1—Zn1ii | 99.351 (11) | O3vi—B1—O3ii | 119.5 (3) |
Symmetry codes: (i) y, −x+y, −z; (ii) x−y, x, −z; (iii) −y+1, x−y, z; (iv) −x+y+1, −x+1, z; (v) x−y+1/3, −y+2/3, −z+1/6; (vi) −y+1/3, −x+2/3, z+1/6. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O1vii | 0.82 (16) | 1.63 (17) | 2.450 (6) | 180 |
Symmetry code: (vii) y+1/3, x−1/3, −z+1/6. |
Experimental details
Crystal data |
Chemical formula | H[Zn6O2(BO3)3] |
Mr | 601.66 |
Crystal system, space group | Trigonal, R3c |
Temperature (K) | 193 |
a, c (Å) | 8.1558 (5), 26.171 (4) |
V (Å3) | 1507.6 (3) |
Z | 6 |
Radiation type | Mo Kα |
µ (mm−1) | 14.14 |
Crystal size (mm) | 0.22 × 0.15 × 0.15 |
|
Data collection |
Diffractometer | Stoe IPDS-II diffractometer |
Absorption correction | Multi-scan (Blessing 1995) |
Tmin, Tmax | 0.047, 0.104 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3364, 541, 516 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.724 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.019, 0.044, 1.25 |
No. of reflections | 541 |
No. of parameters | 35 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.56, −0.72 |
Selected geometric parameters (Å, º) topZn1—O3 | 1.9383 (15) | Zn1—O2 | 1.9630 (13) |
Zn1—O3i | 1.9565 (16) | O2—B1 | 1.372 (4) |
Zn1—O1 | 1.9616 (4) | B1—O3ii | 1.378 (2) |
| | | |
O3—Zn1—O3i | 106.38 (8) | B1—O2—Zn1 | 123.93 (5) |
O3—Zn1—O1 | 113.99 (9) | Zn1v—O2—Zn1 | 112.14 (11) |
O3i—Zn1—O1 | 109.88 (5) | B1i—O3—Zn1 | 125.50 (15) |
O3—Zn1—O2 | 111.66 (7) | B1i—O3—Zn1vi | 125.21 (14) |
O3i—Zn1—O2 | 108.86 (5) | Zn1—O3—Zn1vi | 108.33 (7) |
O1—Zn1—O2 | 106.02 (9) | O2—B1—O3ii | 120.23 (14) |
Zn1iii—O1—Zn1iv | 118.90 (3) | O3ii—B1—O3vi | 119.5 (3) |
Zn1—O1—H1 | 96.05 (9) | | |
Symmetry codes: (i) y, −x+y, −z; (ii) −y+1/3, −x+2/3, z+1/6; (iii) −y+1, x−y, z; (iv) −x+y+1, −x+1, z; (v) x−y+1/3, −y+2/3, −z+1/6; (vi) x−y, x, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O1vii | 0.82 (16) | 1.63 (17) | 2.450 (6) | 180.0 |
Symmetry code: (vii) y+1/3, x−1/3, −z+1/6. |
Borates show a large structural diversity from isolated anions to three-dimensional frameworks containing [BO3]3− and/or [BO4]5− moieties. Many of the framework structures are built in combination with mono- or bivalent metals. In the course of investigations on borate frameworks, such as Na3(NO3)(B6O10) (Yakubovich et al., 2002), we became interested in mixed anionic systems containing zinc. Interestingly, among more than 200 known borate minerals no Zn compound is reported, but several synthetic Zn borates have been structurally characterized so far, namely ZnB4O7 (Martinez-Ripoll et al. 1971), Zn3(BO3)2 (Baur & Tillmanns 1970), Zn(B3O3(OH)5·H2O (Ozols et al. 1971), Zn2(BO3)[(OH)0.75F0.25] (Corbel et al., 2001), Zn(H2O)(B2O4)(H2O)0.12 (Choudhury et al. 2002), Zn4O(BO3)2 (Harrison et al. 1993) and Zn4O(BO2)6 (Bondareva et al., 1978; Smith-Verdier & Garcia-Blanco, 1980). The last one is a borate analogue of the microporous aluminosilicate sodalite Na4Cl(AlSiO4)3. Zn[B3O4(OH)3] is the most important commercial Zn borate today, used primarily as a polymer additive and preservative in wood composites with a worldwide annual production exceeding 10 000 metric tons (Schubert et al., 2003).
In the course of investigating the products of soft hydrothermal syntheses in the system ZnO–B2O3–NaBr–H2O, we found crystals with the previously unreported composition H[Zn6O2(BO3)3].
In the structure (Fig. 1), the Zn2+ ions are surrounded by O atoms in tetrahedral coordination at distances from 1.938 (2) to 1.963 (1) Å. Boron forms only triangular oxo-complexes with B—O bonds between 1.372 (4) and 1.378 (2) Å. Each O atom is surrounded by three cations, viz. three Zn atoms for atom O1, and two Zn and one B atoms for atoms O2 and O3. Thus, a three-dimensional framework is formed. The main feature is triple units of [ZnO4] tetrahedra sharing one common O1 vertex that are connected by an equivalent unit over three corners (O2) and three [BO3] units to form a cage, in the center of which a disordered H atom is localized (Fig. 2). This H atom was found in a difference Fourier map close to the 6a position (site symmetry 32) and was refined with a free isotropic displacement parameter. It forms a strong asymmetric linear hydrogen bond between two µ3-bridging O1 atoms with an O···O distance of 2.450 (6) Å. The O—H···O axis is on the threefold axis, and the H atom is disordered by operation of the twofold axis over both alternative positions of a double-minimum potential. An electron density map calculated by a difference Fourier synthesis after removing the H atom from the model (Fig. 3) clearly shows a double maximum. The crystal chemical function of the H atoms seems to be the stabilization of the unusual cage unit shown in Fig. 2. Hydrogen bonds of similar strength [O···O = 2.4853 (5) Å] have been reported for γ-metaboric acid (Freyhardt et al. 2000) and are well known from structures of hydrogen sulfates, hydrogen phosphates and hydrogen arsenates. In a recent paper (Schwendtner & Kolitsch 2005), a similar example with split H positions and an O···O distance of 2.508 (4) Å was found for CsCr(H1.5AsO4)2(H2AsO4).
The three-dimensional structure can be described as formed by layers of the aforementioned B6 cages (Fig. 2) interconnected by [BO3] units to form a porous net (Fig. 4a). Along the c axis, equivalent layers are stacked according to the space-group symmetry in six orientations (`6L structure') and interconnected by sharing common vertices of [ZnO4] tetrahedra and via [BO3] units (Fig. 4b).
Our compound has similar unit-cell parameters and the same space-group type as the Zn borate Zn4O(BO3)2 published by Harrison et al. (1993). Its crystal structure was solved from powder data and corresponds roughly to our model, but the authors could achieve a charg- balanced formula for the compound only by assumption of vacancies in the position of one O atom, the occupancy of which was fixed to 0.833 (giving a formula comparable to our setting [Zn6O1.5(BO3)3]). Probably, these authors had the same compound H[Zn6O2(BO3)3] in hand but, of course, were unable to detect the H atom by powder methods.