The compound studied is 1,2-dimethyl-4-nitro-5-morpholinoimidazole (1) in its anhydrous (1) and hydrated [(1)·H
2O] crystal forms. In spite of the strong electron-withdrawing effect of the nitro group, the unsubstituted N atom of the imidazole moiety retains its basic character and acts as an acceptor for intermolecular hydrogen bonds: either weak C—H
N bonds in (1) or strong O—H
N bonds, with the water molecules, in (1)·H
2O. The packing in (1) is determined by weak C—H
N and C—H
O hydrogen bonds, van der Waals interactions and the stacking of imidazole fragments. The crystal structure of (1)·H
2O is determined by strong O—H(water)
N3(imidazole) and O—H(water)
O(water) hydrogen bonds. This structure consists of a centrosymmetric `matrix' of imidazole derivative molecules and locally noncentrosymmetric arrays of hydrogen-bonded water molecules. Each of these arrays is strictly homodromic,
i.e. it runs only in one direction:
H—O
H—O
H—O
or
O—H
O—H
O—H
. These homodromic domains are statistically distributed within the crystal.
Supporting information
CCDC references: 219300; 219301; 219302
Data collection: KUMA KM4 software (Kuma Diffraction, 1991) for (1); CrysAlis CCD v.158 for (2), (3). Cell refinement: KUMA KM4 software (Kuma Diffraction, 1991) for (1); CrysAlis CCD v.158 for (2), (3). Data reduction: KUMA KM4 software (Kuma Diffraction, 1991) for (1); CrysAlis RED v.158 for (2), (3). For all compounds, program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997).
(1) 1,2-Dimethyl-4-nitro-5-morpholine-imidazole
top
Crystal data top
C9H14N4O3 | F(000) = 240 |
Mr = 226.24 | Dx = 1.329 Mg m−3 |
Monoclinic, P21/m | Mo Kα radiation, λ = 0.71073 Å |
a = 8.589 (2) Å | Cell parameters from 25 reflections |
b = 6.675 (1) Å | θ = 8–15° |
c = 10.657 (2) Å | µ = 0.10 mm−1 |
β = 112.23 (3)° | T = 293 K |
V = 565.57 (19) Å3 | Block, colourless |
Z = 2 | 0.3 × 0.2 × 0.15 mm |
Data collection top
KM4 four-circle diffractometer | Rint = 0.033 |
Radiation source: fine-focus sealed tube | θmax = 25.0°, θmin = 3.7° |
Graphite monochromator | h = 0→10 |
ω/2Θ scans | k = 0→7 |
1140 measured reflections | l = −12→11 |
1068 independent reflections | 3 standard reflections every 100 reflections |
908 reflections with I > 2σ(I) | intensity decay: 2% |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.045 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.091 | w = 1/[σ2(Fo2) + (0.012P)2 + 0.250P] where P = (Fo2 + 2Fc2)/3 |
S = 1.09 | (Δ/σ)max < 0.001 |
1068 reflections | Δρmax = 0.19 e Å−3 |
94 parameters | Δρmin = −0.16 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.68 (2) |
Crystal data top
C9H14N4O3 | V = 565.57 (19) Å3 |
Mr = 226.24 | Z = 2 |
Monoclinic, P21/m | Mo Kα radiation |
a = 8.589 (2) Å | µ = 0.10 mm−1 |
b = 6.675 (1) Å | T = 293 K |
c = 10.657 (2) Å | 0.3 × 0.2 × 0.15 mm |
β = 112.23 (3)° | |
Data collection top
KM4 four-circle diffractometer | Rint = 0.033 |
1140 measured reflections | 3 standard reflections every 100 reflections |
1068 independent reflections | intensity decay: 2% |
908 reflections with I > 2σ(I) | |
Refinement top
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.091 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.19 e Å−3 |
1068 reflections | Δρmin = −0.16 e Å−3 |
94 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
N1 | 0.1556 (2) | 0.2500 | −0.11610 (19) | 0.0537 (6) | |
C11 | 0.2450 (4) | 0.2500 | −0.2081 (3) | 0.0860 (11) | |
H11A | 0.1652 | 0.2500 | −0.3000 | 0.112* | 0.50 |
H11B | 0.3143 | 0.1326 | −0.1925 | 0.112* | 0.50 |
H11D | 0.3640 | 0.2500 | −0.1566 | 0.112* | 0.50 |
H11E | 0.2149 | 0.3674 | −0.2642 | 0.112* | 0.50 |
C2 | 0.2256 (3) | 0.2500 | 0.0218 (2) | 0.0511 (6) | |
C21 | 0.4092 (3) | 0.2500 | 0.1001 (3) | 0.0708 (8) | |
H21A | 0.4674 | 0.2500 | 0.0389 | 0.092* | 0.50 |
H21B | 0.4397 | 0.1326 | 0.1562 | 0.092* | 0.50 |
H21D | 0.4305 | 0.2500 | 0.1953 | 0.092* | 0.50 |
H21E | 0.4582 | 0.3674 | 0.0780 | 0.092* | 0.50 |
N3 | 0.1108 (2) | 0.2500 | 0.07445 (19) | 0.0515 (6) | |
C4 | −0.0374 (3) | 0.2500 | −0.0341 (2) | 0.0472 (6) | |
N4 | −0.1904 (3) | 0.2500 | −0.0126 (3) | 0.0627 (6) | |
O41 | −0.3226 (2) | 0.2500 | −0.1123 (2) | 0.0810 (7) | |
O42 | −0.1848 (3) | 0.2500 | 0.1038 (2) | 0.0970 (8) | |
C5 | −0.0162 (3) | 0.2500 | −0.1553 (2) | 0.0487 (6) | |
N51 | −0.1166 (3) | 0.2500 | −0.2927 (2) | 0.0592 (6) | |
C52 | −0.2144 (3) | 0.0691 (4) | −0.3464 (2) | 0.0842 (7) | |
H52A | −0.3076 | 0.0609 | −0.3163 | 0.101* | |
H52B | −0.1442 | −0.0485 | −0.3139 | 0.101* | |
C53 | −0.2796 (3) | 0.0767 (5) | −0.4980 (2) | 0.1037 (9) | |
H53A | −0.1854 | 0.0732 | −0.5272 | 0.124* | |
H53B | −0.3484 | −0.0407 | −0.5346 | 0.124* | |
O54 | −0.3755 (3) | 0.2500 | −0.5500 (2) | 0.1033 (9) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0429 (11) | 0.0695 (15) | 0.0462 (11) | 0.000 | 0.0139 (9) | 0.000 |
C11 | 0.0579 (17) | 0.143 (3) | 0.0606 (17) | 0.000 | 0.0269 (14) | 0.000 |
C2 | 0.0447 (13) | 0.0538 (15) | 0.0479 (14) | 0.000 | 0.0099 (11) | 0.000 |
C21 | 0.0491 (15) | 0.087 (2) | 0.0630 (17) | 0.000 | 0.0059 (12) | 0.000 |
N3 | 0.0516 (11) | 0.0516 (13) | 0.0461 (11) | 0.000 | 0.0125 (9) | 0.000 |
C4 | 0.0416 (12) | 0.0459 (14) | 0.0522 (14) | 0.000 | 0.0156 (10) | 0.000 |
N4 | 0.0524 (13) | 0.0628 (15) | 0.0746 (16) | 0.000 | 0.0259 (12) | 0.000 |
O41 | 0.0442 (10) | 0.0976 (17) | 0.0963 (15) | 0.000 | 0.0209 (10) | 0.000 |
O42 | 0.0847 (16) | 0.141 (2) | 0.0825 (16) | 0.000 | 0.0515 (13) | 0.000 |
C5 | 0.0427 (12) | 0.0488 (14) | 0.0474 (13) | 0.000 | 0.0089 (10) | 0.000 |
N51 | 0.0525 (12) | 0.0655 (15) | 0.0453 (11) | 0.000 | 0.0023 (9) | 0.000 |
C52 | 0.0902 (15) | 0.0723 (15) | 0.0619 (12) | −0.0086 (12) | −0.0030 (10) | −0.0079 (11) |
C53 | 0.1044 (18) | 0.110 (2) | 0.0677 (14) | −0.0025 (17) | 0.0001 (12) | −0.0247 (15) |
O54 | 0.0957 (17) | 0.124 (2) | 0.0541 (13) | 0.000 | −0.0122 (11) | 0.000 |
Geometric parameters (Å, º) top
N1—C2 | 1.361 (3) | C4—C5 | 1.371 (3) |
N1—C5 | 1.373 (3) | C4—N4 | 1.417 (3) |
N1—C11 | 1.456 (3) | N4—O42 | 1.222 (3) |
C11—H11A | 0.9600 | N4—O41 | 1.227 (3) |
C11—H11B | 0.9600 | C5—N51 | 1.390 (3) |
C11—H11D | 0.9600 | N51—C52 | 1.459 (2) |
C11—H11E | 0.9600 | N51—C52i | 1.459 (2) |
C2—N3 | 1.306 (3) | C52—C53 | 1.497 (3) |
C2—C21 | 1.479 (3) | C52—H52A | 0.9700 |
C21—H21A | 0.9600 | C52—H52B | 0.9700 |
C21—H21B | 0.9600 | C53—O54 | 1.407 (3) |
C21—H21D | 0.9600 | C53—H53A | 0.9700 |
C21—H21E | 0.9600 | C53—H53B | 0.9700 |
N3—C4 | 1.358 (3) | O54—C53i | 1.407 (3) |
| | | |
C2—N1—C5 | 108.3 (2) | C2—N3—C4 | 104.52 (19) |
C2—N1—C11 | 126.6 (2) | N3—C4—C5 | 112.8 (2) |
C5—N1—C11 | 125.1 (2) | N3—C4—N4 | 119.3 (2) |
N1—C11—H11A | 109.4 | C5—C4—N4 | 127.9 (2) |
N1—C11—H11B | 109.5 | O42—N4—O41 | 123.2 (2) |
H11A—C11—H11B | 109.5 | O42—N4—C4 | 118.8 (2) |
N1—C11—H11D | 109.5 | O41—N4—C4 | 118.1 (2) |
H11A—C11—H11D | 141.1 | C4—C5—N1 | 102.92 (19) |
H11B—C11—H11D | 56.3 | C4—C5—N51 | 137.9 (2) |
N1—C11—H11E | 109.5 | N1—C5—N51 | 119.2 (2) |
H11A—C11—H11E | 56.3 | C5—N51—C52 | 116.69 (13) |
H11B—C11—H11E | 141.1 | C5—N51—C52i | 116.69 (13) |
H11D—C11—H11E | 109.5 | C52—N51—C52i | 111.7 (2) |
N3—C2—N1 | 111.5 (2) | N51—C52—C53 | 108.7 (2) |
N3—C2—C21 | 125.1 (2) | N51—C52—H52A | 110.0 |
N1—C2—C21 | 123.4 (2) | C53—C52—H52A | 110.0 |
C2—C21—H21A | 109.5 | N51—C52—H52B | 110.0 |
C2—C21—H21B | 109.4 | C53—C52—H52B | 110.0 |
H21A—C21—H21B | 109.5 | H52A—C52—H52B | 108.3 |
C2—C21—H21D | 109.4 | O54—C53—C52 | 112.1 (2) |
H21A—C21—H21D | 141.1 | O54—C53—H53A | 109.2 |
H21B—C21—H21D | 56.3 | C52—C53—H53A | 109.2 |
C2—C21—H21E | 109.5 | O54—C53—H53B | 109.2 |
H21A—C21—H21E | 56.3 | C52—C53—H53B | 109.2 |
H21B—C21—H21E | 141.1 | H53A—C53—H53B | 107.9 |
H21D—C21—H21E | 109.5 | C53i—O54—C53 | 110.6 (3) |
| | | |
C5—N1—C2—N3 | 0.0 | N3—C4—C5—N51 | 180.0 |
C11—N1—C2—N3 | 180.0 | N4—C4—C5—N51 | 0.0 |
C5—N1—C2—C21 | 180.0 | C2—N1—C5—C4 | 0.0 |
C11—N1—C2—C21 | 0.0 | C11—N1—C5—C4 | 180.0 |
N1—C2—N3—C4 | 0.0 | C2—N1—C5—N51 | 180.0 |
C21—C2—N3—C4 | 180.0 | C11—N1—C5—N51 | 0.0 |
C2—N3—C4—C5 | 0.0 | C4—C5—N51—C52 | −67.89 (18) |
C2—N3—C4—N4 | 180.0 | N1—C5—N51—C52 | 112.11 (18) |
N3—C4—N4—O42 | 0.0 | C4—C5—N51—C52i | 67.89 (18) |
C5—C4—N4—O42 | 180.0 | N1—C5—N51—C52i | −112.11 (18) |
N3—C4—N4—O41 | 180.0 | C5—N51—C52—C53 | −166.3 (2) |
C5—C4—N4—O41 | 0.0 | C52i—N51—C52—C53 | 55.8 (3) |
N3—C4—C5—N1 | 0.0 | N51—C52—C53—O54 | −56.7 (3) |
N4—C4—C5—N1 | 180.0 | C52—C53—O54—C53i | 58.4 (4) |
Symmetry code: (i) x, −y+1/2, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C21—H21D···O54ii | 0.96 | 2.59 | 3.480 (4) | 154 |
C52—H52B···N3iii | 0.97 | 2.80 | 3.432 (3) | 123 |
C11—H11D···O41iv | 0.96 | 2.55 | 3.460 (3) | 158 |
C21—H21A···O41iv | 0.96 | 2.84 | 3.791 (4) | 173 |
C21—H21A···O42iv | 0.96 | 2.80 | 3.473 (4) | 128 |
Symmetry codes: (ii) x+1, y, z+1; (iii) −x, −y, −z; (iv) x+1, y, z. |
(2) 1,2-Dimethyl-4-nitro-5-morpholine-imidazole hydrate
top
Crystal data top
C9H14N4O3·H2O | Z = 4 |
Mr = 244.26 | F(000) = 520 |
Triclinic, P1 | Dx = 1.437 Mg m−3 |
a = 10.1972 (11) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.2908 (9) Å | Cell parameters from 2644 reflections |
c = 11.1812 (12) Å | θ = 5–20° |
α = 95.319 (8)° | µ = 0.11 mm−1 |
β = 92.235 (9)° | T = 293 K |
γ = 90.777 (8)° | Prism, colourless |
V = 1167.2 (2) Å3 | 0.3 × 0.15 × 0.1 mm |
Data collection top
KUMA KM4CCD κ-craddle diffractometer | 4180 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.011 |
Graphite monochromator | θmax = 27.0°, θmin = 3.5° |
ω–scan | h = −12→12 |
6520 measured reflections | k = −13→13 |
4860 independent reflections | l = 0→13 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.040 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.113 | w = 1/[σ2(Fo2) + (0.0601P)2 + 0.1765P] where P = (Fo2 + 2Fc2)/3 |
S = 1.09 | (Δ/σ)max = 0.014 |
4860 reflections | Δρmax = 0.18 e Å−3 |
444 parameters | Δρmin = −0.23 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.150 (7) |
Crystal data top
C9H14N4O3·H2O | γ = 90.777 (8)° |
Mr = 244.26 | V = 1167.2 (2) Å3 |
Triclinic, P1 | Z = 4 |
a = 10.1972 (11) Å | Mo Kα radiation |
b = 10.2908 (9) Å | µ = 0.11 mm−1 |
c = 11.1812 (12) Å | T = 293 K |
α = 95.319 (8)° | 0.3 × 0.15 × 0.1 mm |
β = 92.235 (9)° | |
Data collection top
KUMA KM4CCD κ-craddle diffractometer | 4180 reflections with I > 2σ(I) |
6520 measured reflections | Rint = 0.011 |
4860 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.113 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.09 | Δρmax = 0.18 e Å−3 |
4860 reflections | Δρmin = −0.23 e Å−3 |
444 parameters | |
Special details top
Experimental. 2 standard frames collected every 50 frames, no decay in intensity observed. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
N1A | 0.55911 (11) | 0.79282 (10) | 1.02008 (9) | 0.0386 (2) | |
C11A | 0.53571 (19) | 0.69762 (15) | 1.10609 (15) | 0.0534 (4) | |
H11A | 0.622 (2) | 0.6781 (19) | 1.1412 (18) | 0.070 (5)* | |
H11B | 0.497 (2) | 0.624 (2) | 1.0637 (19) | 0.075 (6)* | |
H11C | 0.477 (2) | 0.727 (2) | 1.169 (2) | 0.075 (6)* | |
C2A | 0.50083 (13) | 0.78885 (12) | 0.90597 (12) | 0.0415 (3) | |
C21A | 0.39048 (18) | 0.69759 (17) | 0.86410 (18) | 0.0584 (4) | |
H21A | 0.316 (3) | 0.719 (3) | 0.905 (2) | 0.097 (8)* | |
H21B | 0.378 (2) | 0.705 (2) | 0.774 (2) | 0.100 (8)* | |
H21C | 0.412 (2) | 0.609 (2) | 0.8796 (18) | 0.075 (6)* | |
N3A | 0.55427 (12) | 0.87336 (11) | 0.84208 (10) | 0.0440 (3) | |
C4A | 0.65022 (13) | 0.93583 (12) | 0.91746 (11) | 0.0395 (3) | |
N4A | 0.71806 (13) | 1.04363 (12) | 0.88120 (11) | 0.0491 (3) | |
O41A | 0.69052 (15) | 1.07925 (16) | 0.78057 (12) | 0.0831 (4) | |
O42A | 0.80200 (12) | 1.10086 (11) | 0.95088 (11) | 0.0616 (3) | |
C5A | 0.65669 (12) | 0.88711 (11) | 1.02962 (10) | 0.0344 (3) | |
N51A | 0.73443 (10) | 0.91833 (11) | 1.13024 (9) | 0.0404 (3) | |
C52A | 0.68560 (13) | 0.91842 (14) | 1.25208 (11) | 0.0407 (3) | |
H52A | 0.7077 (17) | 0.8365 (17) | 1.2855 (15) | 0.054 (4)* | |
H52B | 0.5908 (17) | 0.9323 (16) | 1.2479 (14) | 0.049 (4)* | |
C53A | 0.75180 (14) | 1.02905 (15) | 1.33071 (13) | 0.0447 (3) | |
H53A | 0.7279 (17) | 1.1108 (18) | 1.3001 (16) | 0.057 (5)* | |
H53B | 0.7279 (17) | 1.0256 (16) | 1.4147 (16) | 0.054 (4)* | |
O54A | 0.89125 (10) | 1.02003 (10) | 1.33088 (9) | 0.0490 (3) | |
C55A | 0.93616 (16) | 1.02495 (17) | 1.21218 (14) | 0.0516 (4) | |
H55A | 0.9163 (17) | 1.1073 (18) | 1.1792 (16) | 0.056 (5)* | |
H55B | 1.0317 (19) | 1.0159 (17) | 1.2196 (15) | 0.057 (5)* | |
C56A | 0.87740 (13) | 0.91522 (14) | 1.12684 (13) | 0.0436 (3) | |
H56A | 0.9059 (16) | 0.9207 (16) | 1.0443 (16) | 0.050 (4)* | |
H56B | 0.9090 (17) | 0.8298 (18) | 1.1521 (16) | 0.056 (5)* | |
N1B | −0.03131 (10) | 0.70881 (9) | 0.56171 (9) | 0.0341 (2) | |
C11B | −0.13654 (14) | 0.80020 (14) | 0.54053 (14) | 0.0455 (3) | |
H11D | −0.2092 (19) | 0.7553 (19) | 0.4941 (17) | 0.065 (5)* | |
H11E | −0.100 (2) | 0.866 (2) | 0.4930 (19) | 0.076 (6)* | |
H11F | −0.168 (2) | 0.837 (2) | 0.6192 (19) | 0.073 (6)* | |
C2B | 0.08689 (12) | 0.70602 (12) | 0.50615 (11) | 0.0366 (3) | |
C21B | 0.11580 (17) | 0.78342 (16) | 0.40435 (14) | 0.0496 (3) | |
H21D | 0.208 (2) | 0.775 (2) | 0.3896 (19) | 0.079 (6)* | |
H21E | 0.098 (2) | 0.872 (2) | 0.4239 (18) | 0.078 (6)* | |
H21F | 0.062 (2) | 0.751 (2) | 0.336 (2) | 0.084 (6)* | |
N3B | 0.16923 (10) | 0.62771 (10) | 0.55401 (10) | 0.0391 (2) | |
C4B | 0.10197 (12) | 0.57708 (11) | 0.64345 (11) | 0.0367 (3) | |
N4B | 0.15675 (12) | 0.47571 (11) | 0.70379 (11) | 0.0451 (3) | |
O41B | 0.26485 (12) | 0.43397 (12) | 0.67332 (12) | 0.0669 (3) | |
O42B | 0.09418 (13) | 0.43057 (11) | 0.78366 (11) | 0.0635 (3) | |
C5B | −0.02392 (12) | 0.62639 (11) | 0.65200 (10) | 0.0335 (3) | |
N51B | −0.12245 (11) | 0.60482 (12) | 0.72637 (9) | 0.0420 (3) | |
C52B | −0.10251 (17) | 0.62879 (17) | 0.85694 (12) | 0.0509 (3) | |
H52C | −0.0092 (19) | 0.6249 (17) | 0.8783 (16) | 0.058 (5)* | |
H52D | −0.1319 (18) | 0.7204 (19) | 0.8828 (17) | 0.063 (5)* | |
C53B | −0.18166 (19) | 0.5307 (2) | 0.91691 (15) | 0.0632 (4) | |
H53C | −0.147 (2) | 0.441 (2) | 0.8951 (18) | 0.069 (5)* | |
H53D | −0.1779 (19) | 0.5526 (19) | 1.0010 (18) | 0.069 (5)* | |
O54B | −0.31690 (12) | 0.53279 (12) | 0.87956 (10) | 0.0607 (3) | |
C55B | −0.33145 (16) | 0.49961 (17) | 0.75223 (14) | 0.0531 (4) | |
H55C | −0.2966 (18) | 0.4083 (19) | 0.7300 (16) | 0.059 (5)* | |
H55D | −0.4280 (19) | 0.5023 (17) | 0.7321 (16) | 0.059 (5)* | |
C56B | −0.26126 (13) | 0.59865 (15) | 0.68533 (12) | 0.0439 (3) | |
H56C | −0.3030 (17) | 0.6883 (18) | 0.7046 (15) | 0.055 (4)* | |
H56D | −0.2655 (17) | 0.5746 (17) | 0.5992 (17) | 0.057 (5)* | |
O1W | 0.54998 (15) | 0.89126 (18) | 0.55858 (16) | 0.0699 (4) | |
H1WA | 0.555 (3) | 0.905 (3) | 0.634 (3) | 0.127 (11)* | |
H1WB | 0.509 (6) | 0.825 (7) | 0.525 (5) | 0.11 (2)* | 0.50 |
H1WC | 0.507 (7) | 0.936 (6) | 0.518 (6) | 0.12 (2)* | 0.50 |
O2W | 0.45280 (17) | 0.6293 (2) | 0.52183 (18) | 0.0854 (5) | |
H2WA | 0.375 (3) | 0.626 (2) | 0.532 (2) | 0.088 (7)* | |
H2WB | 0.489 (7) | 0.697 (8) | 0.528 (6) | 0.11 (2)* | 0.50 |
H2WC | 0.496 (9) | 0.572 (7) | 0.499 (8) | 0.15 (3)* | 0.50 |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1A | 0.0430 (6) | 0.0319 (5) | 0.0409 (5) | 0.0001 (4) | −0.0035 (4) | 0.0056 (4) |
C11A | 0.0658 (10) | 0.0409 (7) | 0.0547 (9) | −0.0101 (7) | −0.0033 (8) | 0.0150 (6) |
C2A | 0.0441 (7) | 0.0369 (6) | 0.0422 (7) | 0.0078 (5) | −0.0059 (5) | −0.0003 (5) |
C21A | 0.0549 (10) | 0.0488 (9) | 0.0681 (11) | −0.0007 (7) | −0.0167 (8) | −0.0037 (7) |
N3A | 0.0497 (6) | 0.0455 (6) | 0.0364 (5) | 0.0105 (5) | −0.0036 (5) | 0.0024 (4) |
C4A | 0.0435 (7) | 0.0407 (6) | 0.0351 (6) | 0.0061 (5) | 0.0038 (5) | 0.0063 (5) |
N4A | 0.0526 (7) | 0.0531 (7) | 0.0441 (6) | 0.0033 (5) | 0.0114 (5) | 0.0144 (5) |
O41A | 0.0952 (10) | 0.1023 (10) | 0.0586 (7) | −0.0136 (8) | 0.0032 (7) | 0.0466 (7) |
O42A | 0.0643 (7) | 0.0578 (6) | 0.0641 (7) | −0.0130 (5) | 0.0088 (5) | 0.0122 (5) |
C5A | 0.0362 (6) | 0.0327 (5) | 0.0344 (6) | 0.0051 (5) | 0.0013 (5) | 0.0033 (4) |
N51A | 0.0355 (5) | 0.0536 (6) | 0.0321 (5) | −0.0003 (5) | 0.0004 (4) | 0.0035 (4) |
C52A | 0.0377 (7) | 0.0516 (7) | 0.0334 (6) | 0.0012 (5) | 0.0007 (5) | 0.0083 (5) |
C53A | 0.0438 (7) | 0.0508 (8) | 0.0391 (7) | 0.0075 (6) | 0.0004 (5) | 0.0012 (6) |
O54A | 0.0421 (5) | 0.0602 (6) | 0.0428 (5) | −0.0010 (4) | −0.0044 (4) | −0.0023 (4) |
C55A | 0.0416 (8) | 0.0618 (9) | 0.0502 (8) | −0.0084 (7) | 0.0019 (6) | −0.0002 (7) |
C56A | 0.0363 (7) | 0.0508 (7) | 0.0433 (7) | 0.0020 (5) | 0.0037 (5) | 0.0004 (6) |
N1B | 0.0329 (5) | 0.0336 (5) | 0.0359 (5) | 0.0039 (4) | −0.0008 (4) | 0.0046 (4) |
C11B | 0.0404 (7) | 0.0452 (7) | 0.0523 (8) | 0.0117 (6) | −0.0019 (6) | 0.0120 (6) |
C2B | 0.0366 (6) | 0.0351 (6) | 0.0375 (6) | 0.0007 (5) | 0.0011 (5) | 0.0003 (5) |
C21B | 0.0563 (9) | 0.0498 (8) | 0.0441 (7) | 0.0011 (7) | 0.0076 (7) | 0.0093 (6) |
N3B | 0.0350 (5) | 0.0365 (5) | 0.0455 (6) | 0.0033 (4) | 0.0016 (4) | 0.0020 (4) |
C4B | 0.0352 (6) | 0.0325 (6) | 0.0421 (6) | 0.0031 (5) | −0.0060 (5) | 0.0040 (5) |
N4B | 0.0469 (6) | 0.0362 (5) | 0.0516 (6) | 0.0034 (5) | −0.0122 (5) | 0.0060 (5) |
O41B | 0.0540 (7) | 0.0574 (6) | 0.0905 (9) | 0.0238 (5) | −0.0062 (6) | 0.0141 (6) |
O42B | 0.0746 (8) | 0.0575 (6) | 0.0616 (7) | 0.0059 (6) | −0.0064 (6) | 0.0251 (5) |
C5B | 0.0344 (6) | 0.0321 (5) | 0.0333 (5) | −0.0007 (4) | −0.0039 (4) | 0.0014 (4) |
N51B | 0.0374 (6) | 0.0562 (7) | 0.0323 (5) | −0.0022 (5) | −0.0009 (4) | 0.0055 (5) |
C52B | 0.0549 (9) | 0.0632 (9) | 0.0335 (7) | −0.0013 (7) | −0.0027 (6) | 0.0007 (6) |
C53B | 0.0697 (11) | 0.0830 (12) | 0.0385 (8) | −0.0002 (9) | 0.0034 (7) | 0.0142 (8) |
O54B | 0.0595 (7) | 0.0786 (8) | 0.0456 (6) | −0.0050 (6) | 0.0161 (5) | 0.0100 (5) |
C55B | 0.0475 (8) | 0.0638 (10) | 0.0481 (8) | −0.0071 (7) | 0.0091 (6) | 0.0040 (7) |
C56B | 0.0354 (7) | 0.0583 (8) | 0.0380 (7) | −0.0004 (6) | 0.0023 (5) | 0.0036 (6) |
O1W | 0.0681 (9) | 0.0772 (9) | 0.0643 (9) | 0.0135 (7) | 0.0025 (7) | 0.0043 (7) |
O2W | 0.0430 (8) | 0.0921 (12) | 0.1174 (13) | 0.0006 (8) | 0.0050 (8) | −0.0105 (10) |
Geometric parameters (Å, º) top
N1A—C5A | 1.3745 (16) | C11B—H11D | 0.97 (2) |
N1A—C2A | 1.3832 (16) | C11B—H11E | 0.98 (2) |
N1A—C11A | 1.4587 (17) | C11B—H11F | 0.99 (2) |
C11A—H11A | 0.98 (2) | C2B—N3B | 1.3054 (16) |
C11A—H11B | 0.93 (2) | C2B—C21B | 1.4848 (19) |
C11A—H11C | 0.97 (2) | C21B—H21D | 0.96 (2) |
C2A—N3A | 1.3024 (18) | C21B—H21E | 0.94 (2) |
C2A—C21A | 1.489 (2) | C21B—H21F | 0.96 (2) |
C21A—H21A | 0.92 (3) | N3B—C4B | 1.3720 (17) |
C21A—H21B | 1.02 (3) | C4B—C5B | 1.3902 (17) |
C21A—H21C | 0.97 (2) | C4B—N4B | 1.4044 (16) |
N3A—C4A | 1.3780 (17) | N4B—O41B | 1.2372 (17) |
C4A—C5A | 1.3927 (16) | N4B—O42B | 1.2384 (17) |
C4A—N4A | 1.3994 (18) | C5B—N51B | 1.3578 (16) |
N4A—O41A | 1.2385 (17) | N51B—C52B | 1.4636 (17) |
N4A—O42A | 1.2392 (17) | N51B—C56B | 1.4696 (17) |
C5A—N51A | 1.3615 (16) | C52B—C53B | 1.505 (2) |
N51A—C56A | 1.4605 (17) | C52B—H52C | 0.974 (19) |
N51A—C52A | 1.4686 (16) | C52B—H52D | 1.01 (2) |
C52A—C53A | 1.507 (2) | C53B—O54B | 1.426 (2) |
C52A—H52A | 0.979 (17) | C53B—H53C | 1.01 (2) |
C52A—H52B | 0.979 (17) | C53B—H53D | 0.95 (2) |
C53A—O54A | 1.4262 (17) | O54B—C55B | 1.4344 (19) |
C53A—H53A | 0.968 (19) | C55B—C56B | 1.508 (2) |
C53A—H53B | 0.983 (18) | C55B—H55C | 1.021 (19) |
O54A—C55A | 1.4258 (18) | C55B—H55D | 1.003 (19) |
C55A—C56A | 1.511 (2) | C56B—H56C | 1.029 (19) |
C55A—H55A | 0.976 (18) | C56B—H56D | 0.972 (18) |
C55A—H55B | 0.981 (19) | O1W—H1WA | 0.84 (4) |
C56A—H56A | 0.985 (17) | O1W—H1WB | 0.85 (7) |
C56A—H56B | 1.001 (18) | O1W—H1WC | 0.80 (6) |
N1B—C2B | 1.3767 (16) | O2W—H2WA | 0.80 (3) |
N1B—C5B | 1.3780 (15) | O2W—H2WB | 0.78 (8) |
N1B—C11B | 1.4631 (16) | O2W—H2WC | 0.77 (9) |
| | | |
C5A—N1A—C2A | 108.13 (10) | N1B—C11B—H11D | 110.2 (11) |
C5A—N1A—C11A | 126.13 (11) | N1B—C11B—H11E | 106.6 (12) |
C2A—N1A—C11A | 124.92 (12) | H11D—C11B—H11E | 108.7 (16) |
N1A—C11A—H11A | 106.3 (12) | N1B—C11B—H11F | 108.8 (11) |
N1A—C11A—H11B | 107.6 (13) | H11D—C11B—H11F | 109.4 (16) |
H11A—C11A—H11B | 111.4 (17) | H11E—C11B—H11F | 113.0 (17) |
N1A—C11A—H11C | 114.1 (12) | N3B—C2B—N1B | 111.77 (11) |
H11A—C11A—H11C | 110.4 (17) | N3B—C2B—C21B | 124.67 (12) |
H11B—C11A—H11C | 107.2 (18) | N1B—C2B—C21B | 123.56 (12) |
N3A—C2A—N1A | 111.84 (12) | C2B—C21B—H21D | 107.5 (13) |
N3A—C2A—C21A | 125.33 (13) | C2B—C21B—H21E | 110.8 (13) |
N1A—C2A—C21A | 122.84 (13) | H21D—C21B—H21E | 108.6 (18) |
C2A—C21A—H21A | 110.6 (16) | C2B—C21B—H21F | 108.8 (13) |
C2A—C21A—H21B | 105.5 (14) | H21D—C21B—H21F | 112.1 (18) |
H21A—C21A—H21B | 113 (2) | H21E—C21B—H21F | 109.1 (18) |
C2A—C21A—H21C | 110.6 (12) | C2B—N3B—C4B | 104.87 (10) |
H21A—C21A—H21C | 107 (2) | N3B—C4B—C5B | 112.10 (10) |
H21B—C21A—H21C | 110.8 (19) | N3B—C4B—N4B | 119.71 (12) |
C2A—N3A—C4A | 104.78 (11) | C5B—C4B—N4B | 127.73 (12) |
N3A—C4A—C5A | 112.03 (11) | O41B—N4B—O42B | 122.84 (12) |
N3A—C4A—N4A | 119.78 (11) | O41B—N4B—C4B | 118.35 (13) |
C5A—C4A—N4A | 127.85 (12) | O42B—N4B—C4B | 118.80 (12) |
O41A—N4A—O42A | 122.39 (13) | N51B—C5B—N1B | 124.66 (11) |
O41A—N4A—C4A | 118.41 (13) | N51B—C5B—C4B | 132.20 (11) |
O42A—N4A—C4A | 119.19 (12) | N1B—C5B—C4B | 103.14 (10) |
N51A—C5A—N1A | 124.30 (11) | C5B—N51B—C52B | 120.90 (11) |
N51A—C5A—C4A | 132.48 (12) | C5B—N51B—C56B | 122.53 (10) |
N1A—C5A—C4A | 103.22 (10) | C52B—N51B—C56B | 113.71 (11) |
C5A—N51A—C56A | 121.48 (11) | N51B—C52B—C53B | 109.44 (13) |
C5A—N51A—C52A | 122.68 (11) | N51B—C52B—H52C | 109.4 (11) |
C56A—N51A—C52A | 113.41 (10) | C53B—C52B—H52C | 111.9 (10) |
N51A—C52A—C53A | 108.64 (11) | N51B—C52B—H52D | 108.6 (10) |
N51A—C52A—H52A | 110.0 (10) | C53B—C52B—H52D | 110.1 (11) |
C53A—C52A—H52A | 108.3 (10) | H52C—C52B—H52D | 107.3 (15) |
N51A—C52A—H52B | 108.3 (10) | O54B—C53B—C52B | 111.18 (14) |
C53A—C52A—H52B | 109.4 (10) | O54B—C53B—H53C | 109.0 (11) |
H52A—C52A—H52B | 112.2 (14) | C52B—C53B—H53C | 109.1 (12) |
O54A—C53A—C52A | 111.66 (11) | O54B—C53B—H53D | 106.3 (12) |
O54A—C53A—H53A | 108.0 (11) | C52B—C53B—H53D | 109.6 (12) |
C52A—C53A—H53A | 108.9 (11) | H53C—C53B—H53D | 111.6 (16) |
O54A—C53A—H53B | 106.0 (10) | C53B—O54B—C55B | 109.89 (12) |
C52A—C53A—H53B | 110.2 (10) | O54B—C55B—C56B | 110.64 (13) |
H53A—C53A—H53B | 112.1 (15) | O54B—C55B—H55C | 110.3 (10) |
C55A—O54A—C53A | 110.30 (11) | C56B—C55B—H55C | 110.4 (10) |
O54A—C55A—C56A | 111.63 (12) | O54B—C55B—H55D | 105.9 (10) |
O54A—C55A—H55A | 112.7 (10) | C56B—C55B—H55D | 109.1 (10) |
C56A—C55A—H55A | 108.2 (10) | H55C—C55B—H55D | 110.4 (15) |
O54A—C55A—H55B | 105.3 (10) | N51B—C56B—C55B | 108.52 (12) |
C56A—C55A—H55B | 109.9 (10) | N51B—C56B—H56C | 109.6 (10) |
H55A—C55A—H55B | 109.1 (15) | C55B—C56B—H56C | 108.7 (9) |
N51A—C56A—C55A | 109.39 (12) | N51B—C56B—H56D | 108.1 (10) |
N51A—C56A—H56A | 110.6 (10) | C55B—C56B—H56D | 111.6 (10) |
C55A—C56A—H56A | 111.5 (10) | H56C—C56B—H56D | 110.2 (14) |
N51A—C56A—H56B | 109.4 (10) | H1WA—O1W—H1WB | 121 (4) |
C55A—C56A—H56B | 109.2 (10) | H1WA—O1W—H1WC | 122 (5) |
H56A—C56A—H56B | 106.6 (14) | H1WB—O1W—H1WC | 89 (5) |
C2B—N1B—C5B | 108.11 (10) | H2WA—O2W—H2WB | 119 (5) |
C2B—N1B—C11B | 124.83 (11) | H2WA—O2W—H2WC | 127 (6) |
C5B—N1B—C11B | 126.33 (11) | H2WB—O2W—H2WC | 114 (7) |
| | | |
C5A—N1A—C2A—N3A | 0.16 (15) | C5B—N1B—C2B—N3B | 0.14 (14) |
C11A—N1A—C2A—N3A | −169.98 (14) | C11B—N1B—C2B—N3B | 170.89 (12) |
C5A—N1A—C2A—C21A | −179.89 (13) | C5B—N1B—C2B—C21B | −179.76 (12) |
C11A—N1A—C2A—C21A | 10.0 (2) | C11B—N1B—C2B—C21B | −9.02 (19) |
N1A—C2A—N3A—C4A | −0.58 (15) | N1B—C2B—N3B—C4B | 0.38 (14) |
C21A—C2A—N3A—C4A | 179.48 (14) | C21B—C2B—N3B—C4B | −179.72 (13) |
C2A—N3A—C4A—C5A | 0.81 (15) | C2B—N3B—C4B—C5B | −0.78 (14) |
C2A—N3A—C4A—N4A | −173.02 (12) | C2B—N3B—C4B—N4B | 171.98 (11) |
N3A—C4A—N4A—O41A | −0.8 (2) | N3B—C4B—N4B—O41B | −0.61 (18) |
C5A—C4A—N4A—O41A | −173.56 (14) | C5B—C4B—N4B—O41B | 170.90 (13) |
N3A—C4A—N4A—O42A | 178.34 (13) | N3B—C4B—N4B—O42B | −179.47 (12) |
C5A—C4A—N4A—O42A | 5.6 (2) | C5B—C4B—N4B—O42B | −8.0 (2) |
C2A—N1A—C5A—N51A | 179.64 (12) | C2B—N1B—C5B—N51B | 179.74 (11) |
C11A—N1A—C5A—N51A | −10.4 (2) | C11B—N1B—C5B—N51B | 9.17 (19) |
C2A—N1A—C5A—C4A | 0.33 (13) | C2B—N1B—C5B—C4B | −0.58 (12) |
C11A—N1A—C5A—C4A | 170.31 (14) | C11B—N1B—C5B—C4B | −171.15 (12) |
N3A—C4A—C5A—N51A | −179.94 (13) | N3B—C4B—C5B—N51B | −179.51 (12) |
N4A—C4A—C5A—N51A | −6.7 (2) | N4B—C4B—C5B—N51B | 8.5 (2) |
N3A—C4A—C5A—N1A | −0.70 (14) | N3B—C4B—C5B—N1B | 0.85 (13) |
N4A—C4A—C5A—N1A | 172.51 (13) | N4B—C4B—C5B—N1B | −171.19 (12) |
N1A—C5A—N51A—C56A | 124.70 (14) | N1B—C5B—N51B—C52B | −122.86 (14) |
C4A—C5A—N51A—C56A | −56.2 (2) | C4B—C5B—N51B—C52B | 57.6 (2) |
N1A—C5A—N51A—C52A | −36.38 (18) | N1B—C5B—N51B—C56B | 36.80 (19) |
C4A—C5A—N51A—C52A | 142.72 (14) | C4B—C5B—N51B—C56B | −142.78 (14) |
C5A—N51A—C52A—C53A | −143.68 (12) | C5B—N51B—C52B—C53B | −146.02 (14) |
C56A—N51A—C52A—C53A | 53.85 (15) | C56B—N51B—C52B—C53B | 52.65 (18) |
N51A—C52A—C53A—O54A | −56.54 (15) | N51B—C52B—C53B—O54B | −55.38 (19) |
C52A—C53A—O54A—C55A | 60.32 (15) | C52B—C53B—O54B—C55B | 61.12 (19) |
C53A—O54A—C55A—C56A | −59.31 (16) | C53B—O54B—C55B—C56B | −62.30 (18) |
C5A—N51A—C56A—C55A | 143.97 (13) | C5B—N51B—C56B—C55B | 145.44 (13) |
C52A—N51A—C56A—C55A | −53.33 (16) | C52B—N51B—C56B—C55B | −53.57 (16) |
O54A—C55A—C56A—N51A | 55.17 (17) | O54B—C55B—C56B—N51B | 57.32 (17) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···N3A | 0.84 (4) | 2.38 (4) | 3.191 (2) | 162 (3) |
O2W—H2WA···N3B | 0.80 (3) | 2.12 (3) | 2.928 (2) | 177 (2) |
O1W—H1WC···O1Wi | 0.80 (6) | 2.12 (6) | 2.875 (3) | 157 (6) |
O2W—H2WC···O2Wii | 0.77 (9) | 2.14 (8) | 2.849 (5) | 153 (8) |
C11A—H11A···O41Biii | 0.98 (2) | 2.69 (2) | 3.515 (2) | 141.7 (15) |
C52A—H52A···O41Biii | 0.979 (17) | 2.879 (18) | 3.8314 (18) | 164.7 (13) |
C56A—H56B···O42Biii | 1.001 (18) | 2.838 (18) | 3.7965 (19) | 160.5 (13) |
C11A—H11B···O54Biv | 0.93 (2) | 2.56 (2) | 3.253 (2) | 131.2 (16) |
C53B—H53D···O42Biv | 0.95 (2) | 2.51 (2) | 3.417 (2) | 160.0 (16) |
C11A—H11C···O41Av | 0.97 (2) | 2.68 (2) | 3.469 (3) | 139.2 (16) |
C21A—H21A···O42Av | 0.92 (3) | 2.67 (3) | 3.474 (2) | 146 (2) |
C52A—H52B···N3Av | 0.979 (17) | 2.745 (16) | 3.4702 (18) | 131.3 (12) |
C52A—H52B···O41Av | 0.979 (17) | 2.874 (17) | 3.839 (2) | 169.0 (13) |
C55A—H55B···O42Avi | 0.981 (19) | 2.799 (18) | 3.488 (2) | 127.8 (13) |
C11B—H11D···O41Bvii | 0.97 (2) | 2.61 (2) | 3.441 (2) | 142.9 (15) |
C21B—H21F···O42Bvii | 0.96 (2) | 2.67 (2) | 3.538 (2) | 151.8 (17) |
C56B—H56D···N3Bvii | 0.972 (18) | 2.785 (18) | 3.5452 (19) | 135.6 (13) |
C56B—H56D···O41Bvii | 0.972 (18) | 3.040 (18) | 3.992 (2) | 166.7 (14) |
C11B—H11E···O54Aviii | 0.98 (2) | 2.51 (2) | 3.4220 (18) | 153.8 (16) |
C21B—H21E···O54Aviii | 0.94 (2) | 2.84 (2) | 3.496 (2) | 127.8 (16) |
C21B—H21D···O41Ai | 0.96 (2) | 2.75 (2) | 3.310 (2) | 117.4 (15) |
C56B—H56C···N3Aix | 1.029 (19) | 2.796 (19) | 3.7529 (19) | 154.8 (12) |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x+1, −y+1, −z+2; (iv) −x, −y+1, −z+2; (v) −x+1, −y+2, −z+2; (vi) −x+2, −y+2, −z+2; (vii) −x, −y+1, −z+1; (viii) x−1, y, z−1; (ix) x−1, y, z. |
(3) 1,2-Dimethyl-4-nitro-5-morpholine-imidazole hydrate
top
Crystal data top
C9H14N4O3·H2O | Z = 4 |
Mr = 244.26 | F(000) = 520 |
Triclinic, P1 | Dx = 1.437 Mg m−3 |
a = 10.1087 (7) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.2497 (8) Å | Cell parameters from 4474 reflections |
c = 10.9623 (8) Å | θ = 5–25° |
α = 95.888 (6)° | µ = 0.11 mm−1 |
β = 92.119 (6)° | T = 110 K |
γ = 90.188 (6)° | Prism, colourless |
V = 1129.02 (14) Å3 | 0.3 × 0.15 × 0.1 mm |
Data collection top
KUMA KM4CCD κ-craddle diffractometer | 4823 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.025 |
Graphite monochromator | θmax = 27.0°, θmin = 3.5° |
ω–scan | h = −12→12 |
17221 measured reflections | k = −13→13 |
4891 independent reflections | l = 0→13 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.080 | All H-atom parameters refined |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0376P)2 + 0.4207P] where P = (Fo2 + 2Fc2)/3 |
4891 reflections | (Δ/σ)max = 0.001 |
443 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
Crystal data top
C9H14N4O3·H2O | γ = 90.188 (6)° |
Mr = 244.26 | V = 1129.02 (14) Å3 |
Triclinic, P1 | Z = 4 |
a = 10.1087 (7) Å | Mo Kα radiation |
b = 10.2497 (8) Å | µ = 0.11 mm−1 |
c = 10.9623 (8) Å | T = 110 K |
α = 95.888 (6)° | 0.3 × 0.15 × 0.1 mm |
β = 92.119 (6)° | |
Data collection top
KUMA KM4CCD κ-craddle diffractometer | 4823 reflections with I > 2σ(I) |
17221 measured reflections | Rint = 0.025 |
4891 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.033 | 0 restraints |
wR(F2) = 0.080 | All H-atom parameters refined |
S = 1.05 | Δρmax = 0.29 e Å−3 |
4891 reflections | Δρmin = −0.25 e Å−3 |
443 parameters | |
Special details top
Experimental. 2 standard frames collected every 50 frames, no decay in intensity observed. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
N1A | 0.55519 (8) | 0.79240 (8) | 1.02238 (8) | 0.01597 (17) | |
C11A | 0.53236 (11) | 0.69921 (10) | 1.11181 (10) | 0.0216 (2) | |
H11A | 0.6165 (14) | 0.6760 (14) | 1.1482 (13) | 0.027 (3)* | |
H11B | 0.4895 (14) | 0.6230 (14) | 1.0696 (13) | 0.026 (3)* | |
H11C | 0.4747 (15) | 0.7354 (15) | 1.1756 (14) | 0.032 (4)* | |
C2A | 0.49632 (10) | 0.78621 (9) | 0.90581 (9) | 0.01705 (19) | |
C21A | 0.38525 (11) | 0.69469 (11) | 0.86485 (11) | 0.0225 (2) | |
H21A | 0.3056 (17) | 0.7194 (17) | 0.9055 (15) | 0.043 (4)* | |
H21B | 0.3719 (15) | 0.6956 (16) | 0.7761 (15) | 0.037 (4)* | |
H21C | 0.4072 (14) | 0.6050 (15) | 0.8802 (13) | 0.029 (4)* | |
N3A | 0.54991 (8) | 0.86896 (8) | 0.83891 (8) | 0.01781 (17) | |
C4A | 0.64719 (10) | 0.93213 (10) | 0.91452 (9) | 0.01668 (19) | |
N4A | 0.71501 (9) | 1.03920 (9) | 0.87632 (8) | 0.01955 (18) | |
O41A | 0.68691 (9) | 1.07270 (9) | 0.77256 (8) | 0.0328 (2) | |
O42A | 0.79948 (8) | 1.09822 (8) | 0.94732 (7) | 0.02421 (17) | |
C5A | 0.65380 (9) | 0.88567 (9) | 1.02992 (9) | 0.01466 (19) | |
N51A | 0.73274 (8) | 0.91829 (8) | 1.13167 (7) | 0.01695 (17) | |
C52A | 0.68481 (10) | 0.91889 (10) | 1.25651 (9) | 0.01673 (19) | |
H52A | 0.7084 (13) | 0.8358 (13) | 1.2912 (12) | 0.019 (3)* | |
H52B | 0.5898 (13) | 0.9303 (13) | 1.2541 (12) | 0.020 (3)* | |
C53A | 0.74987 (10) | 1.03294 (10) | 1.33568 (9) | 0.0179 (2) | |
H53A | 0.7226 (13) | 1.1161 (13) | 1.3069 (12) | 0.020 (3)* | |
H53B | 0.7265 (13) | 1.0310 (13) | 1.4205 (12) | 0.020 (3)* | |
O54A | 0.89116 (7) | 1.02469 (7) | 1.33414 (6) | 0.01920 (16) | |
C55A | 0.93525 (10) | 1.02871 (11) | 1.21231 (10) | 0.0208 (2) | |
H55A | 0.9114 (13) | 1.1139 (14) | 1.1821 (12) | 0.024 (3)* | |
H55B | 1.0309 (14) | 1.0197 (13) | 1.2180 (12) | 0.022 (3)* | |
C56A | 0.87705 (10) | 0.91619 (10) | 1.12616 (9) | 0.0181 (2) | |
H56A | 0.9024 (13) | 0.9229 (13) | 1.0434 (12) | 0.019 (3)* | |
H56B | 0.9105 (13) | 0.8308 (14) | 1.1503 (12) | 0.022 (3)* | |
N1B | −0.03358 (8) | 0.70964 (8) | 0.55890 (7) | 0.01422 (16) | |
C11B | −0.14026 (10) | 0.80241 (10) | 0.53932 (10) | 0.0179 (2) | |
H11D | −0.2132 (14) | 0.7590 (13) | 0.4952 (12) | 0.022 (3)* | |
H11E | −0.1050 (14) | 0.8684 (14) | 0.4918 (13) | 0.028 (3)* | |
H11F | −0.1692 (13) | 0.8417 (14) | 0.6184 (13) | 0.024 (3)* | |
C2B | 0.08687 (9) | 0.70744 (9) | 0.50304 (9) | 0.01509 (19) | |
C21B | 0.11580 (11) | 0.78562 (10) | 0.40040 (10) | 0.0194 (2) | |
H21D | 0.2089 (16) | 0.7795 (15) | 0.3850 (14) | 0.034 (4)* | |
H21E | 0.0943 (14) | 0.8765 (15) | 0.4188 (13) | 0.031 (4)* | |
H21F | 0.0650 (15) | 0.7525 (15) | 0.3264 (15) | 0.036 (4)* | |
N3B | 0.17024 (8) | 0.62824 (8) | 0.55141 (8) | 0.01610 (17) | |
C4B | 0.10220 (9) | 0.57635 (9) | 0.64155 (9) | 0.01566 (19) | |
N4B | 0.15743 (8) | 0.47352 (8) | 0.70125 (8) | 0.01801 (18) | |
O41B | 0.26760 (8) | 0.43151 (8) | 0.67048 (8) | 0.02572 (18) | |
O42B | 0.09302 (8) | 0.42651 (8) | 0.78124 (7) | 0.02442 (17) | |
C5B | −0.02583 (9) | 0.62620 (9) | 0.64964 (9) | 0.01443 (18) | |
N51B | −0.12545 (8) | 0.60380 (9) | 0.72474 (7) | 0.01724 (17) | |
C52B | −0.26532 (9) | 0.60195 (10) | 0.68302 (9) | 0.0173 (2) | |
H52C | −0.3055 (12) | 0.6900 (13) | 0.7022 (11) | 0.018 (3)* | |
H52D | −0.2696 (13) | 0.5770 (13) | 0.5943 (12) | 0.020 (3)* | |
C53B | −0.33780 (10) | 0.50305 (11) | 0.75019 (9) | 0.0202 (2) | |
H53C | −0.3041 (13) | 0.4147 (13) | 0.7284 (12) | 0.018 (3)* | |
H53D | −0.4327 (13) | 0.5055 (13) | 0.7283 (12) | 0.020 (3)* | |
O54B | −0.32284 (8) | 0.53485 (8) | 0.88041 (7) | 0.02333 (17) | |
C55B | −0.18642 (11) | 0.52805 (12) | 0.91827 (10) | 0.0244 (2) | |
H55C | −0.1535 (14) | 0.4381 (14) | 0.8954 (12) | 0.024 (3)* | |
H55D | −0.1821 (14) | 0.5485 (14) | 1.0070 (14) | 0.030 (4)* | |
C56B | −0.10485 (11) | 0.62598 (11) | 0.85819 (9) | 0.0204 (2) | |
H56C | −0.0111 (14) | 0.6180 (13) | 0.8793 (12) | 0.024 (3)* | |
H56D | −0.1349 (14) | 0.7146 (15) | 0.8847 (13) | 0.026 (3)* | |
O1W | 0.54842 (9) | 0.88890 (11) | 0.55380 (9) | 0.02853 (19) | |
H1WA | 0.5601 (19) | 0.9034 (19) | 0.631 (2) | 0.056 (5)* | |
H1WB | 0.513 (3) | 0.816 (4) | 0.536 (3) | 0.041 (9)* | 0.50 |
H1WC | 0.513 (4) | 0.948 (4) | 0.524 (3) | 0.050 (10)* | 0.50 |
O2W | 0.45302 (10) | 0.62954 (13) | 0.52133 (10) | 0.0369 (2) | |
H2WA | 0.3734 (19) | 0.6266 (17) | 0.5321 (15) | 0.041 (4)* | |
H2WB | 0.487 (4) | 0.701 (5) | 0.521 (4) | 0.054 (11)* | 0.50 |
H2WC | 0.488 (5) | 0.562 (4) | 0.502 (4) | 0.064 (13)* | 0.50 |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1A | 0.0177 (4) | 0.0137 (4) | 0.0164 (4) | 0.0002 (3) | −0.0016 (3) | 0.0021 (3) |
C11A | 0.0273 (5) | 0.0176 (5) | 0.0205 (5) | −0.0041 (4) | −0.0018 (4) | 0.0065 (4) |
C2A | 0.0184 (5) | 0.0157 (4) | 0.0164 (5) | 0.0044 (4) | −0.0016 (4) | −0.0005 (4) |
C21A | 0.0213 (5) | 0.0196 (5) | 0.0254 (5) | 0.0000 (4) | −0.0052 (4) | −0.0012 (4) |
N3A | 0.0193 (4) | 0.0181 (4) | 0.0157 (4) | 0.0038 (3) | −0.0006 (3) | 0.0004 (3) |
C4A | 0.0177 (5) | 0.0170 (4) | 0.0155 (4) | 0.0025 (4) | 0.0016 (4) | 0.0018 (4) |
N4A | 0.0202 (4) | 0.0218 (4) | 0.0175 (4) | 0.0022 (3) | 0.0051 (3) | 0.0046 (3) |
O41A | 0.0373 (5) | 0.0421 (5) | 0.0219 (4) | −0.0060 (4) | 0.0011 (3) | 0.0172 (4) |
O42A | 0.0240 (4) | 0.0236 (4) | 0.0251 (4) | −0.0050 (3) | 0.0029 (3) | 0.0024 (3) |
C5A | 0.0149 (4) | 0.0135 (4) | 0.0155 (4) | 0.0027 (3) | 0.0012 (3) | 0.0005 (3) |
N51A | 0.0141 (4) | 0.0231 (4) | 0.0135 (4) | −0.0007 (3) | 0.0004 (3) | 0.0012 (3) |
C52A | 0.0156 (5) | 0.0206 (5) | 0.0142 (4) | 0.0003 (4) | 0.0008 (3) | 0.0030 (4) |
C53A | 0.0155 (5) | 0.0208 (5) | 0.0170 (5) | 0.0026 (4) | 0.0002 (4) | 0.0005 (4) |
O54A | 0.0153 (3) | 0.0250 (4) | 0.0166 (3) | −0.0002 (3) | −0.0008 (3) | −0.0005 (3) |
C55A | 0.0166 (5) | 0.0255 (5) | 0.0198 (5) | −0.0031 (4) | 0.0016 (4) | −0.0005 (4) |
C56A | 0.0142 (5) | 0.0217 (5) | 0.0180 (5) | 0.0010 (4) | 0.0016 (4) | −0.0002 (4) |
N1B | 0.0131 (4) | 0.0144 (4) | 0.0153 (4) | 0.0014 (3) | −0.0002 (3) | 0.0022 (3) |
C11B | 0.0154 (5) | 0.0176 (5) | 0.0213 (5) | 0.0042 (4) | −0.0005 (4) | 0.0047 (4) |
C2B | 0.0139 (4) | 0.0147 (4) | 0.0162 (4) | −0.0005 (3) | 0.0006 (3) | −0.0009 (3) |
C21B | 0.0212 (5) | 0.0195 (5) | 0.0180 (5) | 0.0002 (4) | 0.0026 (4) | 0.0040 (4) |
N3B | 0.0153 (4) | 0.0148 (4) | 0.0181 (4) | 0.0003 (3) | 0.0007 (3) | 0.0009 (3) |
C4B | 0.0148 (4) | 0.0148 (4) | 0.0172 (4) | 0.0011 (3) | −0.0020 (3) | 0.0016 (3) |
N4B | 0.0187 (4) | 0.0152 (4) | 0.0195 (4) | 0.0007 (3) | −0.0050 (3) | 0.0010 (3) |
O41B | 0.0197 (4) | 0.0234 (4) | 0.0340 (4) | 0.0084 (3) | −0.0030 (3) | 0.0035 (3) |
O42B | 0.0288 (4) | 0.0233 (4) | 0.0222 (4) | 0.0002 (3) | −0.0024 (3) | 0.0089 (3) |
C5B | 0.0153 (4) | 0.0131 (4) | 0.0143 (4) | −0.0006 (3) | −0.0022 (3) | 0.0001 (3) |
N51B | 0.0144 (4) | 0.0245 (4) | 0.0130 (4) | −0.0007 (3) | 0.0000 (3) | 0.0026 (3) |
C52B | 0.0136 (4) | 0.0223 (5) | 0.0159 (5) | 0.0010 (4) | 0.0006 (3) | 0.0017 (4) |
C53B | 0.0187 (5) | 0.0242 (5) | 0.0176 (5) | −0.0022 (4) | 0.0029 (4) | 0.0012 (4) |
O54B | 0.0220 (4) | 0.0313 (4) | 0.0171 (4) | −0.0017 (3) | 0.0051 (3) | 0.0030 (3) |
C55B | 0.0253 (5) | 0.0324 (6) | 0.0161 (5) | 0.0002 (4) | 0.0010 (4) | 0.0056 (4) |
C56B | 0.0217 (5) | 0.0254 (5) | 0.0135 (5) | −0.0004 (4) | −0.0012 (4) | 0.0002 (4) |
O1W | 0.0254 (4) | 0.0347 (5) | 0.0251 (5) | 0.0048 (4) | 0.0006 (3) | 0.0010 (4) |
O2W | 0.0156 (4) | 0.0468 (6) | 0.0465 (6) | −0.0017 (4) | 0.0026 (4) | −0.0043 (5) |
Geometric parameters (Å, º) top
N1A—C5A | 1.3732 (13) | C11B—H11D | 0.950 (14) |
N1A—C2A | 1.3849 (13) | C11B—H11E | 0.970 (15) |
N1A—C11A | 1.4609 (13) | C11B—H11F | 0.973 (14) |
C11A—H11A | 0.967 (15) | C2B—N3B | 1.3077 (13) |
C11A—H11B | 0.960 (15) | C2B—C21B | 1.4838 (14) |
C11A—H11C | 0.972 (16) | C21B—H21D | 0.963 (16) |
C2A—N3A | 1.3057 (14) | C21B—H21E | 0.960 (15) |
C2A—C21A | 1.4871 (15) | C21B—H21F | 0.974 (16) |
C21A—H21A | 0.957 (18) | N3B—C4B | 1.3741 (13) |
C21A—H21B | 0.978 (16) | C4B—C5B | 1.3956 (14) |
C21A—H21C | 0.976 (15) | C4B—N4B | 1.4034 (13) |
N3A—C4A | 1.3780 (14) | N4B—O41B | 1.2412 (12) |
C4A—C5A | 1.3961 (14) | N4B—O42B | 1.2458 (12) |
C4A—N4A | 1.4001 (14) | C5B—N51B | 1.3576 (13) |
N4A—O41A | 1.2447 (12) | N51B—C56B | 1.4642 (13) |
N4A—O42A | 1.2457 (13) | N51B—C52B | 1.4693 (13) |
C5A—N51A | 1.3596 (13) | C52B—C53B | 1.5149 (15) |
N51A—C56A | 1.4624 (13) | C52B—H52C | 0.997 (13) |
N51A—C52A | 1.4680 (13) | C52B—H52D | 0.979 (13) |
C52A—C53A | 1.5155 (15) | C53B—O54B | 1.4334 (13) |
C52A—H52A | 0.994 (13) | C53B—H53C | 0.979 (13) |
C52A—H52B | 0.968 (13) | C53B—H53D | 0.981 (13) |
C53A—O54A | 1.4318 (12) | O54B—C55B | 1.4294 (14) |
C53A—H53A | 0.976 (14) | C55B—C56B | 1.5139 (16) |
C53A—H53B | 0.969 (13) | C55B—H55C | 0.992 (14) |
O54A—C55A | 1.4280 (13) | C55B—H55D | 0.973 (15) |
C55A—C56A | 1.5162 (15) | C56B—H56C | 0.973 (14) |
C55A—H55A | 0.993 (14) | C56B—H56D | 0.978 (15) |
C55A—H55B | 0.972 (14) | O1W—H1WA | 0.84 (2) |
C56A—H56A | 0.961 (13) | O1W—H1WB | 0.83 (4) |
C56A—H56B | 0.997 (14) | O1W—H1WC | 0.80 (4) |
N1B—C5B | 1.3771 (13) | O2W—H2WA | 0.819 (19) |
N1B—C2B | 1.3823 (13) | O2W—H2WB | 0.81 (5) |
N1B—C11B | 1.4646 (13) | O2W—H2WC | 0.79 (4) |
| | | |
C5A—N1A—C2A | 107.84 (9) | N1B—C11B—H11D | 110.6 (8) |
C5A—N1A—C11A | 126.09 (9) | N1B—C11B—H11E | 107.2 (8) |
C2A—N1A—C11A | 125.15 (9) | H11D—C11B—H11E | 109.5 (12) |
N1A—C11A—H11A | 109.0 (9) | N1B—C11B—H11F | 109.3 (8) |
N1A—C11A—H11B | 108.1 (8) | H11D—C11B—H11F | 109.2 (11) |
H11A—C11A—H11B | 110.4 (12) | H11E—C11B—H11F | 111.0 (12) |
N1A—C11A—H11C | 111.6 (9) | N3B—C2B—N1B | 111.71 (9) |
H11A—C11A—H11C | 109.8 (12) | N3B—C2B—C21B | 124.90 (9) |
H11B—C11A—H11C | 107.9 (12) | N1B—C2B—C21B | 123.39 (9) |
N3A—C2A—N1A | 112.04 (9) | C2B—C21B—H21D | 108.8 (9) |
N3A—C2A—C21A | 125.33 (9) | C2B—C21B—H21E | 112.1 (9) |
N1A—C2A—C21A | 122.63 (10) | H21D—C21B—H21E | 108.3 (12) |
C2A—C21A—H21A | 111.6 (10) | C2B—C21B—H21F | 110.6 (9) |
C2A—C21A—H21B | 107.7 (9) | H21D—C21B—H21F | 109.3 (13) |
H21A—C21A—H21B | 110.3 (13) | H21E—C21B—H21F | 107.7 (12) |
C2A—C21A—H21C | 111.0 (9) | C2B—N3B—C4B | 105.15 (8) |
H21A—C21A—H21C | 108.8 (13) | N3B—C4B—C5B | 111.65 (9) |
H21B—C21A—H21C | 107.4 (13) | N3B—C4B—N4B | 119.88 (9) |
C2A—N3A—C4A | 104.71 (8) | C5B—C4B—N4B | 127.93 (9) |
N3A—C4A—C5A | 111.84 (9) | O41B—N4B—O42B | 122.68 (9) |
N3A—C4A—N4A | 119.89 (9) | O41B—N4B—C4B | 118.54 (9) |
C5A—C4A—N4A | 127.86 (10) | O42B—N4B—C4B | 118.77 (9) |
O41A—N4A—O42A | 122.51 (9) | N51B—C5B—N1B | 124.69 (9) |
O41A—N4A—C4A | 118.29 (9) | N51B—C5B—C4B | 131.74 (9) |
O42A—N4A—C4A | 119.19 (9) | N1B—C5B—C4B | 103.57 (9) |
N51A—C5A—N1A | 124.14 (9) | C5B—N51B—C56B | 120.42 (9) |
N51A—C5A—C4A | 132.29 (9) | C5B—N51B—C52B | 122.35 (8) |
N1A—C5A—C4A | 103.57 (9) | C56B—N51B—C52B | 113.95 (8) |
C5A—N51A—C56A | 121.34 (8) | N51B—C52B—C53B | 108.15 (8) |
C5A—N51A—C52A | 122.56 (8) | N51B—C52B—H52C | 110.5 (7) |
C56A—N51A—C52A | 113.66 (8) | C53B—C52B—H52C | 109.0 (7) |
N51A—C52A—C53A | 108.22 (8) | N51B—C52B—H52D | 108.0 (8) |
N51A—C52A—H52A | 110.5 (7) | C53B—C52B—H52D | 111.0 (8) |
C53A—C52A—H52A | 109.2 (8) | H52C—C52B—H52D | 110.2 (10) |
N51A—C52A—H52B | 109.0 (8) | O54B—C53B—C52B | 110.76 (9) |
C53A—C52A—H52B | 109.5 (8) | O54B—C53B—H53C | 109.2 (7) |
H52A—C52A—H52B | 110.4 (11) | C52B—C53B—H53C | 110.5 (8) |
O54A—C53A—C52A | 111.20 (8) | O54B—C53B—H53D | 107.5 (8) |
O54A—C53A—H53A | 108.8 (8) | C52B—C53B—H53D | 109.2 (8) |
C52A—C53A—H53A | 110.5 (8) | H53C—C53B—H53D | 109.6 (11) |
O54A—C53A—H53B | 106.4 (8) | C55B—O54B—C53B | 109.92 (8) |
C52A—C53A—H53B | 110.1 (8) | O54B—C55B—C56B | 110.65 (9) |
H53A—C53A—H53B | 109.8 (11) | O54B—C55B—H55C | 109.3 (8) |
C55A—O54A—C53A | 110.46 (8) | C56B—C55B—H55C | 109.7 (8) |
O54A—C55A—C56A | 111.28 (9) | O54B—C55B—H55D | 106.6 (9) |
O54A—C55A—H55A | 110.0 (8) | C56B—C55B—H55D | 110.2 (9) |
C56A—C55A—H55A | 110.3 (8) | H55C—C55B—H55D | 110.4 (12) |
O54A—C55A—H55B | 105.8 (8) | N51B—C56B—C55B | 109.49 (9) |
C56A—C55A—H55B | 109.2 (8) | N51B—C56B—H56C | 109.3 (8) |
H55A—C55A—H55B | 110.2 (11) | C55B—C56B—H56C | 111.1 (8) |
N51A—C56A—C55A | 109.23 (9) | N51B—C56B—H56D | 107.9 (8) |
N51A—C56A—H56A | 109.8 (8) | C55B—C56B—H56D | 109.1 (8) |
C55A—C56A—H56A | 110.8 (8) | H56C—C56B—H56D | 110.0 (11) |
N51A—C56A—H56B | 109.3 (8) | H1WA—O1W—H1WB | 110 (3) |
C55A—C56A—H56B | 110.3 (8) | H1WA—O1W—H1WC | 113 (3) |
H56A—C56A—H56B | 107.4 (11) | H1WB—O1W—H1WC | 115 (4) |
C5B—N1B—C2B | 107.91 (8) | H2WA—O2W—H2WB | 118 (3) |
C5B—N1B—C11B | 126.17 (8) | H2WA—O2W—H2WC | 117 (3) |
C2B—N1B—C11B | 125.05 (8) | H2WB—O2W—H2WC | 125 (4) |
| | | |
C5A—N1A—C2A—N3A | −0.23 (11) | C5B—N1B—C2B—N3B | 0.28 (11) |
C11A—N1A—C2A—N3A | −169.82 (9) | C11B—N1B—C2B—N3B | 170.12 (9) |
C5A—N1A—C2A—C21A | 179.75 (9) | C5B—N1B—C2B—C21B | 179.98 (9) |
C11A—N1A—C2A—C21A | 10.16 (15) | C11B—N1B—C2B—C21B | −10.18 (15) |
N1A—C2A—N3A—C4A | −0.23 (11) | N1B—C2B—N3B—C4B | 0.25 (11) |
C21A—C2A—N3A—C4A | 179.79 (9) | C21B—C2B—N3B—C4B | −179.44 (9) |
C2A—N3A—C4A—C5A | 0.61 (11) | C2B—N3B—C4B—C5B | −0.70 (11) |
C2A—N3A—C4A—N4A | −172.58 (9) | C2B—N3B—C4B—N4B | 171.52 (8) |
N3A—C4A—N4A—O41A | −1.58 (14) | N3B—C4B—N4B—O41B | −0.11 (14) |
C5A—C4A—N4A—O41A | −173.57 (10) | C5B—C4B—N4B—O41B | 170.71 (9) |
N3A—C4A—N4A—O42A | 177.52 (9) | N3B—C4B—N4B—O42B | −178.81 (8) |
C5A—C4A—N4A—O42A | 5.52 (15) | C5B—C4B—N4B—O42B | −7.99 (15) |
C2A—N1A—C5A—N51A | 179.92 (9) | C2B—N1B—C5B—N51B | 179.53 (9) |
C11A—N1A—C5A—N51A | −10.62 (15) | C11B—N1B—C5B—N51B | 9.83 (15) |
C2A—N1A—C5A—C4A | 0.57 (10) | C2B—N1B—C5B—C4B | −0.66 (10) |
C11A—N1A—C5A—C4A | 170.03 (9) | C11B—N1B—C5B—C4B | −170.37 (9) |
N3A—C4A—C5A—N51A | 179.98 (10) | N3B—C4B—C5B—N51B | −179.36 (10) |
N4A—C4A—C5A—N51A | −7.49 (17) | N4B—C4B—C5B—N51B | 9.20 (17) |
N3A—C4A—C5A—N1A | −0.74 (11) | N3B—C4B—C5B—N1B | 0.85 (11) |
N4A—C4A—C5A—N1A | 171.78 (9) | N4B—C4B—C5B—N1B | −170.59 (9) |
N1A—C5A—N51A—C56A | 126.36 (10) | N1B—C5B—N51B—C56B | −123.53 (11) |
C4A—C5A—N51A—C56A | −54.50 (15) | C4B—C5B—N51B—C56B | 56.72 (15) |
N1A—C5A—N51A—C52A | −34.79 (14) | N1B—C5B—N51B—C52B | 34.77 (14) |
C4A—C5A—N51A—C52A | 144.35 (11) | C4B—C5B—N51B—C52B | −144.98 (11) |
C5A—N51A—C52A—C53A | −142.97 (9) | C5B—N51B—C52B—C53B | 146.88 (9) |
C56A—N51A—C52A—C53A | 54.56 (11) | C56B—N51B—C52B—C53B | −53.54 (11) |
N51A—C52A—C53A—O54A | −56.98 (11) | N51B—C52B—C53B—O54B | 57.39 (11) |
C52A—C53A—O54A—C55A | 60.93 (11) | C52B—C53B—O54B—C55B | −62.84 (11) |
C53A—O54A—C55A—C56A | −59.65 (11) | C53B—O54B—C55B—C56B | 61.36 (11) |
C5A—N51A—C56A—C55A | 143.42 (9) | C5B—N51B—C56B—C55B | −147.04 (9) |
C52A—N51A—C56A—C55A | −53.87 (11) | C52B—N51B—C56B—C55B | 52.94 (12) |
O54A—C55A—C56A—N51A | 55.16 (11) | O54B—C55B—C56B—N51B | −55.46 (12) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···N3A | 0.84 (2) | 2.35 (2) | 3.1523 (14) | 158.6 (18) |
O2W—H2WA···N3B | 0.819 (19) | 2.07 (2) | 2.8899 (14) | 176.2 (17) |
O1W—H1WC···O1Wi | 0.80 (4) | 2.04 (4) | 2.832 (2) | 170 (4) |
O2W—H2WC···O2Wii | 0.79 (4) | 2.04 (4) | 2.823 (3) | 166 (5) |
C11A—H11A···O41Biii | 0.967 (15) | 2.612 (15) | 3.4491 (17) | 145.1 (11) |
C52A—H52A···O41Biii | 0.994 (13) | 2.824 (13) | 3.7874 (15) | 163.5 (10) |
C56A—H56B···O42Biii | 0.997 (14) | 2.815 (14) | 3.7653 (15) | 159.5 (10) |
C11A—H11B···O54Biv | 0.960 (15) | 2.447 (14) | 3.2047 (16) | 135.7 (11) |
C55B—H55D···O42Biv | 0.973 (15) | 2.447 (15) | 3.3780 (16) | 160.1 (12) |
C11A—H11C···O41Av | 0.972 (16) | 2.592 (15) | 3.4088 (19) | 141.7 (11) |
C21A—H21A···O42Av | 0.957 (18) | 2.597 (17) | 3.4126 (18) | 143.3 (13) |
C52A—H52B···N3Av | 0.968 (13) | 2.759 (13) | 3.4307 (17) | 127.1 (10) |
C52A—H52B···O41Av | 0.968 (13) | 2.801 (14) | 3.7614 (15) | 171.6 (10) |
C55A—H55B···O42Avi | 0.972 (14) | 2.735 (13) | 3.4423 (17) | 130.1 (10) |
C11B—H11D···O41Bvii | 0.950 (14) | 2.570 (14) | 3.3651 (18) | 141.4 (11) |
C21B—H21F···O42Bvii | 0.974 (16) | 2.590 (16) | 3.4524 (18) | 147.7 (12) |
C52B—H52D···N3Bvii | 0.979 (13) | 2.726 (13) | 3.4710 (17) | 133.3 (10) |
C52B—H52D···O41Bvii | 0.979 (13) | 2.896 (14) | 3.8542 (15) | 166.3 (10) |
C11B—H11E···O54Aviii | 0.970 (15) | 2.473 (15) | 3.3838 (16) | 156.3 (12) |
C21B—H21E···O54Aviii | 0.960 (15) | 2.749 (15) | 3.4597 (16) | 131.4 (11) |
C21B—H21D···O41Ai | 0.963 (16) | 2.655 (15) | 3.2414 (16) | 119.6 (11) |
C52B—H52C···N3Aix | 0.997 (13) | 2.713 (13) | 3.6346 (18) | 153.8 (10) |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x+1, −y+1, −z+2; (iv) −x, −y+1, −z+2; (v) −x+1, −y+2, −z+2; (vi) −x+2, −y+2, −z+2; (vii) −x, −y+1, −z+1; (viii) x−1, y, z−1; (ix) x−1, y, z. |
Experimental details
| (1) | (2) | (3) |
Crystal data |
Chemical formula | C9H14N4O3 | C9H14N4O3·H2O | C9H14N4O3·H2O |
Mr | 226.24 | 244.26 | 244.26 |
Crystal system, space group | Monoclinic, P21/m | Triclinic, P1 | Triclinic, P1 |
Temperature (K) | 293 | 293 | 110 |
a, b, c (Å) | 8.589 (2), 6.675 (1), 10.657 (2) | 10.1972 (11), 10.2908 (9), 11.1812 (12) | 10.1087 (7), 10.2497 (8), 10.9623 (8) |
α, β, γ (°) | 90, 112.23 (3), 90 | 95.319 (8), 92.235 (9), 90.777 (8) | 95.888 (6), 92.119 (6), 90.188 (6) |
V (Å3) | 565.57 (19) | 1167.2 (2) | 1129.02 (14) |
Z | 2 | 4 | 4 |
Radiation type | Mo Kα | Mo Kα | Mo Kα |
µ (mm−1) | 0.10 | 0.11 | 0.11 |
Crystal size (mm) | 0.3 × 0.2 × 0.15 | 0.3 × 0.15 × 0.1 | 0.3 × 0.15 × 0.1 |
|
Data collection |
Diffractometer | KM4 four-circle diffractometer | KUMA KM4CCD κ-craddle diffractometer | KUMA KM4CCD κ-craddle diffractometer |
Absorption correction | – | – | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 1140, 1068, 908 | 6520, 4860, 4180 | 17221, 4891, 4823 |
Rint | 0.033 | 0.011 | 0.025 |
(sin θ/λ)max (Å−1) | 0.595 | 0.639 | 0.639 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.091, 1.09 | 0.040, 0.113, 1.09 | 0.033, 0.080, 1.05 |
No. of reflections | 1068 | 4860 | 4891 |
No. of parameters | 94 | 444 | 443 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.19, −0.16 | 0.18, −0.23 | 0.29, −0.25 |
Hydrogen-bond geometry (Å, º) for (1) top
D—H···A | D—H | H···A | D···A | D—H···A |
C21—H21D···O54i | 0.96 | 2.59 | 3.480 (4) | 153.6 |
C52—H52B···N3ii | 0.97 | 2.80 | 3.432 (3) | 123.4 |
C11—H11D···O41iii | 0.96 | 2.55 | 3.460 (3) | 157.9 |
C21—H21A···O41iii | 0.96 | 2.84 | 3.791 (4) | 172.7 |
C21—H21A···O42iii | 0.96 | 2.80 | 3.473 (4) | 127.8 |
Symmetry codes: (i) x+1, y, z+1; (ii) −x, −y, −z; (iii) x+1, y, z. |
Hydrogen-bond geometry (Å, º) for (2) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···N3A | 0.84 (4) | 2.38 (4) | 3.191 (2) | 162 (3) |
O2W—H2WA···N3B | 0.80 (3) | 2.12 (3) | 2.928 (2) | 177 (2) |
O1W—H1WC···O1Wi | 0.80 (6) | 2.12 (6) | 2.875 (3) | 157 (6) |
O2W—H2WC···O2Wii | 0.77 (9) | 2.14 (8) | 2.849 (5) | 153 (8) |
C11A—H11A···O41Biii | 0.98 (2) | 2.69 (2) | 3.515 (2) | 141.7 (15) |
C52A—H52A···O41Biii | 0.979 (17) | 2.879 (18) | 3.8314 (18) | 164.7 (13) |
C56A—H56B···O42Biii | 1.001 (18) | 2.838 (18) | 3.7965 (19) | 160.5 (13) |
C11A—H11B···O54Biv | 0.93 (2) | 2.56 (2) | 3.253 (2) | 131.2 (16) |
C53B—H53D···O42Biv | 0.95 (2) | 2.51 (2) | 3.417 (2) | 160.0 (16) |
C11A—H11C···O41Av | 0.97 (2) | 2.68 (2) | 3.469 (3) | 139.2 (16) |
C21A—H21A···O42Av | 0.92 (3) | 2.67 (3) | 3.474 (2) | 146 (2) |
C52A—H52B···N3Av | 0.979 (17) | 2.745 (16) | 3.4702 (18) | 131.3 (12) |
C52A—H52B···O41Av | 0.979 (17) | 2.874 (17) | 3.839 (2) | 169.0 (13) |
C55A—H55B···O42Avi | 0.981 (19) | 2.799 (18) | 3.488 (2) | 127.8 (13) |
C11B—H11D···O41Bvii | 0.97 (2) | 2.61 (2) | 3.441 (2) | 142.9 (15) |
C21B—H21F···O42Bvii | 0.96 (2) | 2.67 (2) | 3.538 (2) | 151.8 (17) |
C56B—H56D···N3Bvii | 0.972 (18) | 2.785 (18) | 3.5452 (19) | 135.6 (13) |
C56B—H56D···O41Bvii | 0.972 (18) | 3.040 (18) | 3.992 (2) | 166.7 (14) |
C11B—H11E···O54Aviii | 0.98 (2) | 2.51 (2) | 3.4220 (18) | 153.8 (16) |
C21B—H21E···O54Aviii | 0.94 (2) | 2.84 (2) | 3.496 (2) | 127.8 (16) |
C21B—H21D···O41Ai | 0.96 (2) | 2.75 (2) | 3.310 (2) | 117.4 (15) |
C56B—H56C···N3Aix | 1.029 (19) | 2.796 (19) | 3.7529 (19) | 154.8 (12) |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x+1, −y+1, −z+2; (iv) −x, −y+1, −z+2; (v) −x+1, −y+2, −z+2; (vi) −x+2, −y+2, −z+2; (vii) −x, −y+1, −z+1; (viii) x−1, y, z−1; (ix) x−1, y, z. |
Hydrogen-bond geometry (Å, º) for (3) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···N3A | 0.84 (2) | 2.35 (2) | 3.1523 (14) | 158.6 (18) |
O2W—H2WA···N3B | 0.819 (19) | 2.07 (2) | 2.8899 (14) | 176.2 (17) |
O1W—H1WC···O1Wi | 0.80 (4) | 2.04 (4) | 2.832 (2) | 170 (4) |
O2W—H2WC···O2Wii | 0.79 (4) | 2.04 (4) | 2.823 (3) | 166 (5) |
C11A—H11A···O41Biii | 0.967 (15) | 2.612 (15) | 3.4491 (17) | 145.1 (11) |
C52A—H52A···O41Biii | 0.994 (13) | 2.824 (13) | 3.7874 (15) | 163.5 (10) |
C56A—H56B···O42Biii | 0.997 (14) | 2.815 (14) | 3.7653 (15) | 159.5 (10) |
C11A—H11B···O54Biv | 0.960 (15) | 2.447 (14) | 3.2047 (16) | 135.7 (11) |
C55B—H55D···O42Biv | 0.973 (15) | 2.447 (15) | 3.3780 (16) | 160.1 (12) |
C11A—H11C···O41Av | 0.972 (16) | 2.592 (15) | 3.4088 (19) | 141.7 (11) |
C21A—H21A···O42Av | 0.957 (18) | 2.597 (17) | 3.4126 (18) | 143.3 (13) |
C52A—H52B···N3Av | 0.968 (13) | 2.759 (13) | 3.4307 (17) | 127.1 (10) |
C52A—H52B···O41Av | 0.968 (13) | 2.801 (14) | 3.7614 (15) | 171.6 (10) |
C55A—H55B···O42Avi | 0.972 (14) | 2.735 (13) | 3.4423 (17) | 130.1 (10) |
C11B—H11D···O41Bvii | 0.950 (14) | 2.570 (14) | 3.3651 (18) | 141.4 (11) |
C21B—H21F···O42Bvii | 0.974 (16) | 2.590 (16) | 3.4524 (18) | 147.7 (12) |
C52B—H52D···N3Bvii | 0.979 (13) | 2.726 (13) | 3.4710 (17) | 133.3 (10) |
C52B—H52D···O41Bvii | 0.979 (13) | 2.896 (14) | 3.8542 (15) | 166.3 (10) |
C11B—H11E···O54Aviii | 0.970 (15) | 2.473 (15) | 3.3838 (16) | 156.3 (12) |
C21B—H21E···O54Aviii | 0.960 (15) | 2.749 (15) | 3.4597 (16) | 131.4 (11) |
C21B—H21D···O41Ai | 0.963 (16) | 2.655 (15) | 3.2414 (16) | 119.6 (11) |
C52B—H52C···N3Aix | 0.997 (13) | 2.713 (13) | 3.6346 (18) | 153.8 (10) |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x+1, −y+1, −z+2; (iv) −x, −y+1, −z+2; (v) −x+1, −y+2, −z+2; (vi) −x+2, −y+2, −z+2; (vii) −x, −y+1, −z+1; (viii) x−1, y, z−1; (ix) x−1, y, z. |