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The crystal structures of 6-amino­thio­cytosine (systematic name: 4,6-di­amino-1,2-di­hydro­pyrimidine-2-thione, DAPMT, C4H6N4S), its hemihydrate (0.5H2O) and its di­methyl­formamide (DMF, C3H7NO) monosolvate were com­pared, and the influence of the type of solvent on the supra­molecular motifs was analysed. In all three crystal structures, there are two symmetry-independent mol­ecules (A and B), and these mol­ecules are connected by three relatively short and directional hydrogen bonds to form chains of alternating A and B mol­ecules. A further organization of these chains is dependent on the nature of the solvent mol­ecule. In the unsolvated form, two orientations of the neighbouring chains are observed, and similar motifs – but only one per structure – can be observed in the solvated structures. These two different motifs can be connected by two different kinds of contacts, i.e. either π–π (hemihydrate) or staple-supported S...S (DMF). In the crystal structures, the O atoms of the solvent mol­ecules are double acceptors of the same type of hydrogen bonds and bind the chains of DAPMT mol­ecules into different motifs (dimeric or infinite chains). A Hirshfeld fingerprint analysis was used for visualization and additional inter­pretation of these results.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S2053229620001692/sk3742sup1.cif
Contains datablocks 1, 1DMF, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229620001692/sk37421sup2.hkl
Contains datablock 1

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2053229620001692/sk37421DMFsup3.hkl
Contains datablock 1DMF

CCDC references: 1982224; 1982223

Computing details top

For both structures, data collection: CrysAlis PRO (Rigaku OD, 2019); cell refinement: CrysAlis PRO (Rigaku OD, 2019); data reduction: CrysAlis PRO (Rigaku OD, 2019); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2015b); molecular graphics: Mercury (Macrae et al., 2020) and ORTEP-3 (Farrugia, 2012); software used to prepare material for publication: SHELXL2013 (Sheldrick, 2015b).

4,6-Diamino-1,2-dihydropyrimidine-2-thione (1) top
Crystal data top
C4H6N4SF(000) = 592
Mr = 142.19Dx = 1.549 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
a = 9.7038 (3) ÅCell parameters from 6420 reflections
b = 10.5386 (1) Åθ = 5.6–75.3°
c = 15.3898 (4) ŵ = 3.95 mm1
β = 129.196 (4)°T = 130 K
V = 1219.70 (9) Å3Block, colourless
Z = 80.02 × 0.01 × 0.01 mm
Data collection top
Rigaku OD SuperNova Single source
diffractometer with an Atlas detector
2498 independent reflections
Radiation source: SuperNova (Cu) X-ray Source2411 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.027
Detector resolution: 10.5357 pixels mm-1θmax = 75.6°, θmin = 5.6°
ω scansh = 1012
Absorption correction: multi-scan
(CrysAlis PRO; Rigaku OD, 2019)
k = 1213
Tmin = 0.586, Tmax = 1.000l = 1917
8624 measured reflections
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036All H-atom parameters refined
wR(F2) = 0.104 w = 1/[σ2(Fo2) + (0.0546P)2 + 0.5044P]
where P = (Fo2 + 2Fc2)/3
S = 1.13(Δ/σ)max < 0.001
2498 reflectionsΔρmax = 0.21 e Å3
211 parametersΔρmin = 0.30 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Refinement. X-ray diffraction data were collected on a Rigaku OD four-circle Supernova diffractometer using monochromatic CuKα radiation (λ = 1.54178 Å). The temperature was controlled with an Oxford Instruments Cryosystem device. The data were corrected for absorption (multi-scan) (Rigaku OD, 2018). Accurate unit-cell parameters were determined by a least-squares fit of the reflections of the highest intensity, which were chosen from the whole experiment. The calculations were mainly performed within the WinGX program system (Farrugia, 2012) and OLEX2 (Dolomanov et al., 2009). The structures were solved with SHELXT (Sheldrick, 2015a)/SIR92 (Altomare et al., 1993).

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N1A0.3943 (2)0.38250 (16)0.28201 (13)0.0331 (3)
H1A0.499 (4)0.361 (3)0.314 (2)0.045 (7)*
C2A0.3083 (2)0.33101 (17)0.31767 (15)0.0301 (4)
S2A0.41562 (6)0.21611 (5)0.41853 (4)0.03527 (15)
N3A0.1460 (2)0.37011 (16)0.27509 (13)0.0349 (3)
C4A0.0669 (2)0.46044 (18)0.19339 (16)0.0359 (4)
N4A0.0939 (3)0.4988 (2)0.1556 (2)0.0580 (6)
H4A10.146 (4)0.558 (3)0.109 (3)0.070 (9)*
H4A20.143 (4)0.458 (3)0.175 (2)0.053 (7)*
C5A0.1479 (2)0.51154 (19)0.15197 (16)0.0372 (4)
H5A0.089 (3)0.577 (3)0.093 (2)0.049 (7)*
C6A0.3187 (2)0.47335 (18)0.20079 (15)0.0343 (4)
N6A0.4195 (3)0.5231 (2)0.17719 (18)0.0496 (5)
H6A10.510 (4)0.480 (3)0.190 (2)0.054 (7)*
H6A20.375 (4)0.580 (3)0.129 (3)0.064 (9)*
N1B0.0216 (2)0.33392 (15)0.41027 (13)0.0316 (3)
H1B0.055 (3)0.336 (2)0.373 (2)0.044 (6)*
C2B0.1562 (2)0.32697 (17)0.35684 (15)0.0309 (4)
S2B0.29893 (6)0.31236 (5)0.21430 (4)0.03871 (16)
N3B0.2159 (2)0.32809 (15)0.41436 (13)0.0321 (3)
C4B0.0950 (2)0.34083 (17)0.52799 (15)0.0317 (4)
N4B0.1626 (3)0.3427 (2)0.58142 (17)0.0441 (4)
H4B10.268 (4)0.322 (3)0.543 (2)0.054 (8)*
H4B20.099 (4)0.341 (3)0.649 (2)0.049 (7)*
C5B0.0868 (2)0.35283 (19)0.58554 (15)0.0331 (4)
H5B0.170 (3)0.364 (2)0.663 (2)0.041 (6)*
C6B0.1461 (2)0.34743 (17)0.52414 (14)0.0309 (4)
N6B0.3156 (2)0.3559 (2)0.56732 (16)0.0433 (4)
H6B10.343 (4)0.332 (3)0.529 (2)0.047 (7)*
H6B20.394 (4)0.350 (3)0.637 (3)0.054 (7)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N1A0.0254 (7)0.0419 (8)0.0340 (8)0.0001 (6)0.0197 (6)0.0023 (6)
C2A0.0263 (8)0.0362 (9)0.0300 (8)0.0033 (6)0.0188 (7)0.0046 (7)
S2A0.0301 (2)0.0421 (3)0.0359 (3)0.00286 (17)0.0220 (2)0.00540 (17)
N3A0.0283 (7)0.0419 (8)0.0369 (8)0.0015 (6)0.0218 (6)0.0009 (6)
C4A0.0298 (9)0.0376 (9)0.0384 (9)0.0007 (7)0.0207 (8)0.0002 (7)
N4A0.0382 (10)0.0642 (13)0.0754 (14)0.0178 (9)0.0377 (10)0.0284 (11)
C5A0.0333 (9)0.0373 (9)0.0393 (10)0.0010 (7)0.0222 (8)0.0035 (8)
C6A0.0332 (9)0.0382 (9)0.0343 (9)0.0037 (7)0.0226 (8)0.0012 (7)
N6A0.0455 (10)0.0579 (11)0.0586 (11)0.0066 (9)0.0392 (10)0.0179 (9)
N1B0.0254 (7)0.0434 (8)0.0290 (7)0.0003 (6)0.0186 (6)0.0016 (6)
C2B0.0276 (8)0.0343 (9)0.0301 (9)0.0013 (6)0.0179 (7)0.0021 (6)
S2B0.0279 (2)0.0592 (3)0.0271 (2)0.00483 (18)0.0164 (2)0.00578 (18)
N3B0.0268 (7)0.0424 (8)0.0299 (7)0.0020 (6)0.0192 (6)0.0011 (6)
C4B0.0332 (9)0.0346 (9)0.0300 (8)0.0002 (7)0.0212 (8)0.0014 (7)
N4B0.0373 (10)0.0689 (12)0.0320 (9)0.0046 (8)0.0247 (8)0.0011 (8)
C5B0.0295 (9)0.0405 (9)0.0257 (8)0.0013 (7)0.0157 (7)0.0014 (7)
C6B0.0247 (8)0.0340 (9)0.0295 (8)0.0018 (6)0.0150 (7)0.0006 (6)
N6B0.0264 (8)0.0653 (11)0.0344 (9)0.0024 (7)0.0174 (8)0.0030 (8)
Geometric parameters (Å, º) top
N1A—C6A1.363 (2)N1B—C2B1.366 (2)
N1A—C2A1.368 (2)N1B—C6B1.369 (2)
N1A—H1A0.83 (3)N1B—H1B0.82 (3)
C2A—N3A1.332 (2)C2B—N3B1.329 (2)
C2A—S2A1.7080 (19)C2B—S2B1.7069 (18)
N3A—C4A1.363 (3)N3B—C4B1.364 (2)
C4A—N4A1.338 (3)C4B—N4B1.337 (2)
C4A—C5A1.395 (3)C4B—C5B1.392 (3)
N4A—H4A10.84 (3)N4B—H4B10.82 (3)
N4A—H4A20.82 (3)N4B—H4B20.81 (3)
C5A—C6A1.378 (3)C5B—C6B1.383 (3)
C5A—H5A0.98 (3)C5B—H5B0.94 (3)
C6A—N6A1.346 (3)C6B—N6B1.332 (2)
N6A—H6A10.89 (3)N6B—H6B10.83 (3)
N6A—H6A20.83 (3)N6B—H6B20.84 (3)
C6A—N1A—C2A122.34 (16)C2B—N1B—C6B122.20 (15)
C6A—N1A—H1A118.7 (18)C2B—N1B—H1B119.4 (18)
C2A—N1A—H1A118.8 (18)C6B—N1B—H1B118.3 (18)
N3A—C2A—N1A120.76 (17)N3B—C2B—N1B121.00 (16)
N3A—C2A—S2A121.22 (14)N3B—C2B—S2B121.03 (14)
N1A—C2A—S2A118.01 (13)N1B—C2B—S2B117.94 (13)
C2A—N3A—C4A118.12 (16)C2B—N3B—C4B118.08 (15)
N4A—C4A—N3A115.72 (19)N4B—C4B—N3B115.54 (17)
N4A—C4A—C5A121.61 (19)N4B—C4B—C5B121.62 (18)
N3A—C4A—C5A122.66 (17)N3B—C4B—C5B122.84 (16)
C4A—N4A—H4A1120 (2)C4B—N4B—H4B1115 (2)
C4A—N4A—H4A2118 (2)C4B—N4B—H4B2121.6 (19)
H4A1—N4A—H4A2122 (3)H4B1—N4B—H4B2120 (3)
C6A—C5A—C4A117.96 (18)C6B—C5B—C4B117.94 (16)
C6A—C5A—H5A120.1 (15)C6B—C5B—H5B118.9 (15)
C4A—C5A—H5A121.9 (15)C4B—C5B—H5B123.1 (15)
N6A—C6A—N1A117.32 (17)N6B—C6B—N1B117.25 (17)
N6A—C6A—C5A124.59 (19)N6B—C6B—C5B124.88 (17)
N1A—C6A—C5A118.03 (17)N1B—C6B—C5B117.87 (16)
C6A—N6A—H6A1121.4 (18)C6B—N6B—H6B1118.3 (19)
C6A—N6A—H6A2118 (2)C6B—N6B—H6B2117.9 (19)
H6A1—N6A—H6A2117 (3)H6B1—N6B—H6B2117 (3)
C6A—N1A—C2A—N3A1.3 (3)C6B—N1B—C2B—N3B2.7 (3)
C6A—N1A—C2A—S2A179.03 (14)C6B—N1B—C2B—S2B179.11 (14)
N1A—C2A—N3A—C4A1.5 (3)N1B—C2B—N3B—C4B2.2 (3)
S2A—C2A—N3A—C4A178.81 (14)S2B—C2B—N3B—C4B179.60 (14)
C2A—N3A—C4A—N4A178.28 (19)C2B—N3B—C4B—N4B179.34 (18)
C2A—N3A—C4A—C5A1.0 (3)C2B—N3B—C4B—C5B0.1 (3)
N4A—C4A—C5A—C6A175.5 (2)N4B—C4B—C5B—C6B178.74 (19)
N3A—C4A—C5A—C6A3.7 (3)N3B—C4B—C5B—C6B2.1 (3)
C2A—N1A—C6A—N6A175.89 (18)C2B—N1B—C6B—N6B178.62 (18)
C2A—N1A—C6A—C5A1.5 (3)C2B—N1B—C6B—C5B0.6 (3)
C4A—C5A—C6A—N6A173.4 (2)C4B—C5B—C6B—N6B179.18 (19)
C4A—C5A—C6A—N1A3.8 (3)C4B—C5B—C6B—N1B1.7 (3)
4,6-Diamino-1,2-dihydropyrimidine-2-thione dimethylformamide monosolvate (1DMF) top
Crystal data top
C4H6N4S·C3H7NOF(000) = 912
Mr = 215.28Dx = 1.342 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54184 Å
a = 9.7682 (6) ÅCell parameters from 2779 reflections
b = 13.3671 (13) Åθ = 4.2–75.4°
c = 16.5201 (14) ŵ = 2.55 mm1
β = 99.030 (7)°T = 130 K
V = 2130.3 (3) Å3Prism, colourless
Z = 80.2 × 0.08 × 0.08 mm
Data collection top
Rigaku OD SuperNova Single source
diffractometer with an Atlas detector
3792 independent reflections
Radiation source: micro-focus sealed X-ray tube, SuperNova (Cu) X-ray Source2837 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.059
Detector resolution: 10.5357 pixels mm-1θmax = 67.4°, θmin = 4.3°
ω scansh = 1111
Absorption correction: multi-scan
(CrysAlis PRO; Rigaku OD, 2019)
k = 1515
Tmin = 0.390, Tmax = 1.000l = 1919
9241 measured reflections
Refinement top
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.087H-atom parameters constrained
wR(F2) = 0.224 w = 1/[σ2(Fo2) + (0.0945P)2 + 3.8846P]
where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max < 0.001
3792 reflectionsΔρmax = 0.93 e Å3
257 parametersΔρmin = 0.46 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Refinement. X-ray diffraction data were collected on a Rigaku OD four-circle Supernova diffractometer using monochromatic CuKα radiation (λ = 1.54178 Å). The temperature was controlled with an Oxford Instruments Cryosystem device. The data were corrected for absorption (multi-scan) (Rigaku OD, 2018). Accurate unit-cell parameters were determined by a least-squares fit of the reflections of the highest intensity, which were chosen from the whole experiment. The calculations were mainly performed within the WinGX program system (Farrugia, 2012) and OLEX2 (Dolomanov et al., 2009). The structures were solved with SHELXT (Sheldrick, 2015a)/SIR92 (Altomare et al., 1993).

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N1A0.9079 (4)0.5445 (3)0.6476 (2)0.0375 (8)
H1A0.83550.57300.66360.045*
C2A1.0337 (5)0.5918 (4)0.6630 (3)0.0373 (10)
S2A1.04095 (11)0.70211 (9)0.71543 (7)0.0401 (3)
N3A1.1453 (4)0.5513 (3)0.6395 (2)0.0364 (8)
C4A1.1313 (5)0.4621 (4)0.5988 (3)0.0368 (10)
N4A1.2455 (4)0.4249 (3)0.5747 (3)0.0431 (9)
H4A11.32430.45780.58540.052*
H4A21.24170.36760.54830.052*
C5A1.0056 (5)0.4101 (4)0.5833 (3)0.0380 (10)
H5A0.99920.34680.55690.046*
C6A0.8911 (5)0.4544 (4)0.6080 (3)0.0380 (10)
N6A0.7637 (4)0.4126 (3)0.5972 (3)0.0424 (9)
H6A10.69490.44330.61530.051*
H6A20.74950.35470.57190.051*
N1B0.4283 (4)0.6223 (3)0.7221 (2)0.0381 (9)
H1B0.34520.61030.69470.046*
C2B0.5422 (5)0.6145 (4)0.6812 (3)0.0382 (10)
S2B0.51462 (11)0.58862 (10)0.57953 (7)0.0423 (3)
N3B0.6699 (4)0.6287 (3)0.7227 (2)0.0378 (9)
C4B0.6842 (4)0.6528 (4)0.8036 (3)0.0367 (10)
N4B0.8149 (4)0.6627 (4)0.8421 (2)0.0441 (10)
H4B10.88450.65360.81490.053*
H4B20.83100.67820.89450.053*
C5B0.5716 (5)0.6655 (4)0.8457 (3)0.0405 (10)
H5B0.58470.68550.90150.049*
C6B0.4403 (4)0.6477 (3)0.8028 (3)0.0351 (9)
N6B0.3238 (4)0.6506 (3)0.8357 (2)0.0416 (9)
H6B10.24380.63640.80550.050*
H6B20.32720.66670.88770.050*
N1C0.8201 (5)0.6217 (3)1.1134 (3)0.0455 (10)
C1C0.7863 (5)0.7076 (4)1.0751 (3)0.0413 (11)
H1C0.73730.75491.10260.050*
O1C0.8125 (4)0.7314 (3)1.0077 (2)0.0477 (8)
C11C0.9107 (7)0.5506 (5)1.0805 (5)0.0693 (17)
H11A1.00300.55251.11370.104*
H11B0.91760.56861.02380.104*
H11C0.87210.48311.08190.104*
C12C0.7969 (7)0.6057 (5)1.1970 (3)0.0619 (16)
H12A0.74000.66021.21330.093*
H12B0.88620.60421.23350.093*
H12C0.74890.54191.20050.093*
N1D0.6580 (4)0.1397 (3)0.3952 (3)0.0459 (10)
C1D0.7381 (5)0.2080 (4)0.4386 (3)0.0454 (11)
H1D0.79260.25000.40980.054*
O1D0.7467 (4)0.2207 (3)0.5124 (2)0.0492 (9)
C11D0.5673 (7)0.0796 (5)0.4370 (4)0.0662 (17)
H11D0.50840.12350.46430.099*
H11E0.62320.03720.47790.099*
H11F0.50900.03730.39710.099*
C12D0.6548 (6)0.1259 (5)0.3083 (3)0.0548 (14)
H12D0.72940.16500.29030.082*
H12E0.56520.14850.27880.082*
H12F0.66760.05490.29670.082*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N1A0.0309 (18)0.041 (2)0.042 (2)0.0022 (16)0.0096 (14)0.0019 (17)
C2A0.034 (2)0.045 (3)0.034 (2)0.0052 (19)0.0078 (16)0.0072 (19)
S2A0.0333 (5)0.0423 (7)0.0462 (6)0.0012 (4)0.0114 (4)0.0045 (5)
N3A0.0290 (17)0.044 (2)0.0380 (19)0.0019 (16)0.0112 (14)0.0009 (17)
C4A0.034 (2)0.044 (3)0.034 (2)0.0019 (19)0.0098 (16)0.0002 (19)
N4A0.0347 (19)0.045 (2)0.052 (2)0.0014 (17)0.0145 (16)0.0098 (19)
C5A0.034 (2)0.043 (3)0.039 (2)0.0003 (19)0.0098 (17)0.0008 (19)
C6A0.035 (2)0.044 (3)0.036 (2)0.0029 (19)0.0073 (16)0.0005 (19)
N6A0.0336 (19)0.043 (2)0.052 (2)0.0062 (17)0.0110 (16)0.0083 (18)
N1B0.0277 (17)0.051 (2)0.0377 (19)0.0002 (16)0.0108 (14)0.0004 (17)
C2B0.033 (2)0.041 (3)0.043 (2)0.0002 (19)0.0133 (18)0.003 (2)
S2B0.0337 (6)0.0582 (8)0.0367 (6)0.0020 (5)0.0105 (4)0.0061 (5)
N3B0.0291 (18)0.045 (2)0.041 (2)0.0028 (16)0.0107 (14)0.0021 (17)
C4B0.031 (2)0.041 (3)0.039 (2)0.0059 (18)0.0102 (17)0.0000 (19)
N4B0.0331 (19)0.063 (3)0.038 (2)0.0018 (18)0.0094 (15)0.0063 (19)
C5B0.035 (2)0.052 (3)0.035 (2)0.003 (2)0.0084 (17)0.003 (2)
C6B0.032 (2)0.033 (2)0.043 (2)0.0020 (17)0.0129 (17)0.0002 (18)
N6B0.0344 (19)0.054 (3)0.039 (2)0.0004 (17)0.0113 (15)0.0063 (18)
N1C0.052 (2)0.043 (2)0.042 (2)0.0022 (19)0.0091 (17)0.0006 (18)
C1C0.045 (2)0.041 (3)0.039 (2)0.002 (2)0.0071 (18)0.001 (2)
O1C0.058 (2)0.049 (2)0.0372 (18)0.0023 (17)0.0116 (14)0.0020 (15)
C11C0.066 (4)0.052 (4)0.093 (5)0.012 (3)0.023 (3)0.010 (3)
C12C0.088 (4)0.050 (3)0.046 (3)0.015 (3)0.006 (3)0.006 (3)
N1D0.052 (2)0.044 (2)0.046 (2)0.0093 (19)0.0193 (18)0.0008 (18)
C1D0.048 (3)0.045 (3)0.046 (3)0.010 (2)0.018 (2)0.001 (2)
O1D0.059 (2)0.050 (2)0.0416 (18)0.0102 (17)0.0167 (15)0.0022 (16)
C11D0.072 (4)0.069 (4)0.061 (3)0.032 (3)0.020 (3)0.006 (3)
C12D0.069 (3)0.048 (3)0.050 (3)0.017 (3)0.015 (2)0.005 (2)
Geometric parameters (Å, º) top
N1A—C6A1.368 (6)C5B—H5B0.9500
N1A—C2A1.371 (6)C6B—N6B1.337 (6)
N1A—H1A0.8800N6B—H6B10.8800
C2A—N3A1.329 (6)N6B—H6B20.8800
C2A—S2A1.706 (5)N1C—C1C1.328 (7)
N3A—C4A1.365 (6)N1C—C12C1.449 (7)
C4A—N4A1.337 (6)N1C—C11C1.460 (8)
C4A—C5A1.399 (7)C1C—O1C1.224 (6)
N4A—H4A10.8800C1C—H1C0.9500
N4A—H4A20.8800C11C—H11A0.9800
C5A—C6A1.381 (6)C11C—H11B0.9800
C5A—H5A0.9500C11C—H11C0.9800
C6A—N6A1.350 (6)C12C—H12A0.9800
N6A—H6A10.8800C12C—H12B0.9800
N6A—H6A20.8800C12C—H12C0.9800
N1B—C6B1.363 (6)N1D—C1D1.336 (7)
N1B—C2B1.393 (6)N1D—C12D1.444 (7)
N1B—H1B0.8800N1D—C11D1.448 (7)
C2B—N3B1.340 (6)C1D—O1D1.221 (6)
C2B—S2B1.694 (5)C1D—H1D0.9500
N3B—C4B1.360 (6)C11D—H11D0.9800
C4B—N4B1.340 (6)C11D—H11E0.9800
C4B—C5B1.401 (6)C11D—H11F0.9800
N4B—H4B10.8800C12D—H12D0.9800
N4B—H4B20.8800C12D—H12E0.9800
C5B—C6B1.385 (6)C12D—H12F0.9800
C6A—N1A—C2A122.1 (4)N1B—C6B—C5B118.3 (4)
C6A—N1A—H1A118.9C6B—N6B—H6B1120.0
C2A—N1A—H1A118.9C6B—N6B—H6B2120.0
N3A—C2A—N1A120.7 (5)H6B1—N6B—H6B2120.0
N3A—C2A—S2A122.0 (4)C1C—N1C—C12C121.1 (5)
N1A—C2A—S2A117.2 (4)C1C—N1C—C11C120.4 (5)
C2A—N3A—C4A118.5 (4)C12C—N1C—C11C117.0 (5)
N4A—C4A—N3A116.6 (4)O1C—C1C—N1C125.9 (5)
N4A—C4A—C5A120.7 (5)O1C—C1C—H1C117.1
N3A—C4A—C5A122.7 (4)N1C—C1C—H1C117.1
C4A—N4A—H4A1120.0N1C—C11C—H11A109.5
C4A—N4A—H4A2120.0N1C—C11C—H11B109.5
H4A1—N4A—H4A2120.0H11A—C11C—H11B109.5
C6A—C5A—C4A117.5 (5)N1C—C11C—H11C109.5
C6A—C5A—H5A121.3H11A—C11C—H11C109.5
C4A—C5A—H5A121.3H11B—C11C—H11C109.5
N6A—C6A—N1A117.8 (4)N1C—C12C—H12A109.5
N6A—C6A—C5A123.8 (5)N1C—C12C—H12B109.5
N1A—C6A—C5A118.5 (4)H12A—C12C—H12B109.5
C6A—N6A—H6A1120.0N1C—C12C—H12C109.5
C6A—N6A—H6A2120.0H12A—C12C—H12C109.5
H6A1—N6A—H6A2120.0H12B—C12C—H12C109.5
C6B—N1B—C2B122.7 (4)C1D—N1D—C12D122.7 (4)
C6B—N1B—H1B118.6C1D—N1D—C11D118.3 (4)
C2B—N1B—H1B118.6C12D—N1D—C11D119.0 (5)
N3B—C2B—N1B119.4 (4)O1D—C1D—N1D124.9 (5)
N3B—C2B—S2B121.8 (3)O1D—C1D—H1D117.5
N1B—C2B—S2B118.8 (3)N1D—C1D—H1D117.5
C2B—N3B—C4B118.8 (4)N1D—C11D—H11D109.5
N4B—C4B—N3B115.6 (4)N1D—C11D—H11E109.5
N4B—C4B—C5B121.1 (4)H11D—C11D—H11E109.5
N3B—C4B—C5B123.2 (4)N1D—C11D—H11F109.5
C4B—N4B—H4B1120.0H11D—C11D—H11F109.5
C4B—N4B—H4B2120.0H11E—C11D—H11F109.5
H4B1—N4B—H4B2120.0N1D—C12D—H12D109.5
C6B—C5B—C4B117.5 (4)N1D—C12D—H12E109.5
C6B—C5B—H5B121.3H12D—C12D—H12E109.5
C4B—C5B—H5B121.3N1D—C12D—H12F109.5
N6B—C6B—N1B117.2 (4)H12D—C12D—H12F109.5
N6B—C6B—C5B124.4 (4)H12E—C12D—H12F109.5
C6A—N1A—C2A—N3A0.2 (7)N1B—C2B—N3B—C4B1.5 (7)
C6A—N1A—C2A—S2A178.2 (3)S2B—C2B—N3B—C4B177.7 (4)
N1A—C2A—N3A—C4A0.9 (6)C2B—N3B—C4B—N4B177.8 (5)
S2A—C2A—N3A—C4A179.1 (3)C2B—N3B—C4B—C5B1.3 (8)
C2A—N3A—C4A—N4A178.6 (4)N4B—C4B—C5B—C6B175.9 (5)
C2A—N3A—C4A—C5A2.3 (7)N3B—C4B—C5B—C6B3.1 (8)
N4A—C4A—C5A—C6A178.3 (4)C2B—N1B—C6B—N6B178.6 (5)
N3A—C4A—C5A—C6A2.7 (7)C2B—N1B—C6B—C5B0.7 (7)
C2A—N1A—C6A—N6A178.6 (4)C4B—C5B—C6B—N6B175.7 (5)
C2A—N1A—C6A—C5A0.2 (7)C4B—C5B—C6B—N1B2.1 (7)
C4A—C5A—C6A—N6A179.8 (4)C12C—N1C—C1C—O1C173.3 (5)
C4A—C5A—C6A—N1A1.6 (7)C11C—N1C—C1C—O1C8.0 (8)
C6B—N1B—C2B—N3B2.5 (7)C12D—N1D—C1D—O1D178.1 (5)
C6B—N1B—C2B—S2B176.6 (4)C11D—N1D—C1D—O1D4.0 (9)
Hydrogen-bond data (Å, °)
The electron density at the critical point (ρ) is given in e Å-3, the Laplacian at the critical point (LAP) is given in e Å-5 and energy (E1) [E below?] is defined as -1/2Vcp, where Vcp is the potential energy density in kJ mol-1 Bohr-3
top
D—H···AD—HH···AD···AD—H···AρLaplacianE
1
N1A—H1A···N3Bi0.83 (3)2.18 (2)3.007 (2)172 (3)0.211.9432.03
N4A—H4A2···S2B0.82 (3)2.49 (3)3.302 (2)172 (3)0.191.3725.36
N6A—H6A1···S2Bi0.89 (3)2.41 (3)3.279 (2)163 (2)0.141.1617.615
N1B—H1B···N3A0.82 (3)2.20 (3)3.017 (2)172 (2)0.211.930.925
N4B—H4B1···S2Aii0.82 (3)2.63 (3)3.442 (2)169 (3)0.141.1117.16
N6B—H6B1···S2A0.83 (3)2.53 (3)3.341 (2)169 (3)0.171.2922.41
1·DMF
N1A—H1A···N3B0.882.153.020 (5)1700.191.7727.055
N4A—H4A1···S2Bi0.882.573.412 (4)1620.151.1718.73
N6A—H6A1···S2B0.882.633.364 (4)1420.211.5130.815
N1B—H1B···N3Aii0.882.173.036 (5)1680.191.7927.645
N4B—H4B1···S2A0.882.503.314 (4)1540.191.3524.95
N6B—H6B1···S2Aii0.882.453.215 (4)1460.211.5130.815
N4A—H4A2···O1Ciii0.882.072.937 (6)167
N6A—H6A2···O1D0.882.042.915 (6)172
N4B—H4B2···O1C0.882.042.889 (5)163
N6B—H6B2···O1Div0.882.042.861 (5)156
Symmetry codes: (i) x+1, y, z; (ii) x-1, y, z; (iii) -x+2, y-1/2, -z+3/2; (iv) -x+1, y+1/2, -z+3/2.
Stacking parameters (Å) top
CompoundCentroid–plane distanceCentroid–centroid distanceOffset
13.3153.4841.15
1·DMF3.4804.0304.13
1·0.5H2O3.2503.4451.31
 

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