Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270109002571/sk3285sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S0108270109002571/sk3285Isup2.hkl |
CCDC reference: 728194
For related literature, see: Abbati et al. (1999); Addison et al. (1984); Costes et al. (2000); Cremer & Pople (1975); Duan et al. (2006); Erxleben (2001); Jubert et al. (2002); Larionova et al. (1997); Li et al. (2003, 2004, 2008); Liu et al. (2008); Matović et al. (2005); Messori et al. (2003); Ojima & Nonoyama (1988); Pei et al. (1989, 1991); Ribas et al. (1998); Ruiz et al. (1999); Tao et al. (2003); Tong et al. (1997); Wang et al. (2004); Zang et al. (2003); Zhu et al. (2007).
All reagents were of analytical reagent grade and were used without further purification. The Na[Cu(oxbm)] ligand was prepared according to the method described by Tao et al. (2003). The title complex, [Cu2(oxbm)(bpy)Cl]2.2H2O was obtained as follows. A methanol (5 ml) solution of CuCl2.2H2O (0.0085 g, 0.05 mmol) was added dropwise into an aqueous solution (5 ml) of Na[Cu(oxbm)] (0.0349 g, 0.1 mmol) with continuous stirring. The mixture was stirred quickly for an hour and then 2,2'-bipyridine (0.0078 g, 0.05 mmol) in methanol (5 ml) was added dropwise. The solution obtained was further stirred at 333 K for 6 h. The resulting solution was then filtered and the filtrate was allowed to stand at room temperature for one week to give well shaped green crystals suitable for X-ray analysis (yield 72%). Elemental analysis for C44H44Cl2Cu4N10O10, calculated: C 44.11, H 3.70, N 11.69%; found: C 44.31, H 3.78, N 11.71%.
The methyl group is disordered over two positions, C12A and C12B, whose occupancy factors were refined and then fixed at 0.7 and 0.3, respectively. The C11—C12B bond length of was restrained to a reasonable C—C value, and the C10···C12A and C10···C12B distances of were limited to be equal, as were the N3···C12A and N3···C12B distances. Water H atoms were found in a difference Fourier map and were treated as riding, with fixed Uiso(H) values of 0.08 Å2. The remaining H atoms were placed in calculated positions with N—H distance of 0.90 Å and C—H distances of 0.93 (aromatic), 0.96 (methyl), 0.97 (methylene) or 0.98 Å (methine), and refined in riding mode, with Uiso(H) set at 1.2Ueq(C,N) or 1.5Ueq(methyl C).
Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008a); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008a); molecular graphics: XP (Siemens, 1994) and CAMERON (Watkin et al., 1993); software used to prepare material for publication: WinGX (Farrugia, 1999).
[Cu4(C12H12N3O4)2Cl2(C10H8N2)2]·2H2O | Z = 1 |
Mr = 1197.95 | F(000) = 608 |
Triclinic, P1 | Dx = 1.701 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.9622 (1) Å | Cell parameters from 7568 reflections |
b = 11.1330 (2) Å | θ = 2.4–27.6° |
c = 11.2876 (2) Å | µ = 1.98 mm−1 |
α = 67.072 (1)° | T = 298 K |
β = 69.842 (1)° | Block, green |
γ = 72.688 (1)° | 0.28 × 0.22 × 0.17 mm |
V = 1169.57 (3) Å3 |
Bruker APEX area-detector diffractometer | 5441 independent reflections |
Radiation source: fine-focus sealed tube | 4353 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.017 |
phi and ω scans | θmax = 27.7°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008b) | h = −14→14 |
Tmin = 0.607, Tmax = 0.730 | k = −14→14 |
16602 measured reflections | l = −14→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.098 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0413P)2 + 1.5166P] where P = (Fo2 + 2Fc2)/3 |
5441 reflections | (Δ/σ)max = 0.001 |
328 parameters | Δρmax = 0.98 e Å−3 |
3 restraints | Δρmin = −0.78 e Å−3 |
[Cu4(C12H12N3O4)2Cl2(C10H8N2)2]·2H2O | γ = 72.688 (1)° |
Mr = 1197.95 | V = 1169.57 (3) Å3 |
Triclinic, P1 | Z = 1 |
a = 10.9622 (1) Å | Mo Kα radiation |
b = 11.1330 (2) Å | µ = 1.98 mm−1 |
c = 11.2876 (2) Å | T = 298 K |
α = 67.072 (1)° | 0.28 × 0.22 × 0.17 mm |
β = 69.842 (1)° |
Bruker APEX area-detector diffractometer | 5441 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2008b) | 4353 reflections with I > 2σ(I) |
Tmin = 0.607, Tmax = 0.730 | Rint = 0.017 |
16602 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 3 restraints |
wR(F2) = 0.098 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.98 e Å−3 |
5441 reflections | Δρmin = −0.78 e Å−3 |
328 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cu1 | 0.77756 (3) | 0.05900 (4) | 0.44379 (3) | 0.03567 (11) | |
Cu2 | 0.45722 (3) | 0.28278 (3) | 0.13513 (3) | 0.03533 (10) | |
Cl1 | 0.85509 (9) | 0.27782 (9) | 0.41557 (9) | 0.0578 (2) | |
O1 | 0.75838 (19) | −0.0232 (2) | 0.63187 (19) | 0.0425 (5) | |
O2 | 0.6451 (2) | −0.1184 (2) | 0.83390 (19) | 0.0398 (5) | |
O3 | 0.44344 (18) | 0.2359 (2) | 0.32489 (19) | 0.0373 (4) | |
O4 | 0.63968 (19) | 0.1901 (2) | 0.12240 (18) | 0.0383 (4) | |
O5 | 1.0895 (3) | 0.2385 (3) | 0.1443 (3) | 0.0651 (7) | |
H5A | 1.0391 | 0.2643 | 0.2171 | 0.080* | |
H5B | 1.1616 | 0.2081 | 0.1601 | 0.080* | |
N1 | 0.5857 (2) | 0.1356 (2) | 0.4648 (2) | 0.0313 (5) | |
N2 | 0.7760 (2) | 0.0862 (3) | 0.2650 (2) | 0.0391 (6) | |
N3 | 0.9681 (2) | −0.0300 (3) | 0.3808 (2) | 0.0441 (6) | |
H3A | 1.0227 | 0.0273 | 0.3543 | 0.053* | |
H3B | 0.9919 | −0.1009 | 0.4477 | 0.053* | |
N4 | 0.4793 (3) | 0.3625 (3) | −0.0577 (2) | 0.0440 (6) | |
N5 | 0.2875 (3) | 0.4153 (3) | 0.1380 (3) | 0.0450 (6) | |
C1 | 0.6514 (3) | −0.0291 (3) | 0.7237 (3) | 0.0325 (6) | |
C2 | 0.5284 (3) | 0.0757 (3) | 0.7064 (3) | 0.0316 (5) | |
C3 | 0.4974 (2) | 0.1543 (3) | 0.5842 (3) | 0.0310 (5) | |
C4 | 0.3812 (3) | 0.2504 (3) | 0.5856 (3) | 0.0433 (7) | |
H4 | 0.3592 | 0.3025 | 0.5059 | 0.052* | |
C5 | 0.2983 (3) | 0.2691 (4) | 0.7037 (3) | 0.0527 (8) | |
H5 | 0.2227 | 0.3350 | 0.7022 | 0.063* | |
C6 | 0.3269 (3) | 0.1908 (4) | 0.8236 (3) | 0.0500 (8) | |
H6 | 0.2706 | 0.2026 | 0.9031 | 0.060* | |
C7 | 0.4399 (3) | 0.0950 (3) | 0.8238 (3) | 0.0408 (7) | |
H7 | 0.4582 | 0.0411 | 0.9048 | 0.049* | |
C8 | 0.5542 (3) | 0.1770 (3) | 0.3515 (3) | 0.0312 (5) | |
C9 | 0.6666 (3) | 0.1484 (3) | 0.2351 (3) | 0.0321 (5) | |
C10 | 0.8970 (3) | 0.0388 (3) | 0.1771 (3) | 0.0445 (7) | |
H10A | 0.9459 | 0.1099 | 0.1217 | 0.053* | |
H10B | 0.8772 | 0.0049 | 0.1200 | 0.053* | |
C11 | 0.9770 (3) | −0.0721 (4) | 0.2685 (3) | 0.0551 (9) | |
H11B | 0.9308 | −0.1471 | 0.3074 | 0.066* | 0.70 |
H11A | 1.0698 | −0.0789 | 0.2168 | 0.066* | 0.30 |
C12A | 1.1116 (5) | −0.1214 (6) | 0.1989 (5) | 0.0626 (15) | 0.70 |
H12A | 1.1550 | −0.1911 | 0.2621 | 0.094* | 0.70 |
H12B | 1.1602 | −0.0501 | 0.1549 | 0.094* | 0.70 |
H12C | 1.1076 | −0.1551 | 0.1342 | 0.094* | 0.70 |
C12B | 0.9513 (17) | −0.2058 (7) | 0.3121 (14) | 0.092 (5) | 0.30 |
H12D | 0.9839 | −0.2389 | 0.2379 | 0.137* | 0.30 |
H12E | 0.8578 | −0.2037 | 0.3467 | 0.137* | 0.30 |
H12F | 0.9952 | −0.2627 | 0.3804 | 0.137* | 0.30 |
C13 | 0.5817 (4) | 0.3278 (4) | −0.1497 (4) | 0.0610 (10) | |
H13 | 0.6515 | 0.2617 | −0.1235 | 0.073* | |
C14 | 0.5882 (5) | 0.3881 (5) | −0.2864 (4) | 0.0762 (13) | |
H14 | 0.6606 | 0.3642 | −0.3515 | 0.091* | |
C15 | 0.4814 (6) | 0.4844 (4) | −0.3182 (4) | 0.0753 (13) | |
H15 | 0.4825 | 0.5264 | −0.4076 | 0.090* | |
C16 | 0.3749 (5) | 0.5208 (4) | −0.2256 (4) | 0.0664 (11) | |
H16 | 0.3042 | 0.5862 | −0.2504 | 0.080* | |
C17 | 0.3743 (4) | 0.4577 (3) | −0.0925 (3) | 0.0506 (9) | |
C18 | 0.2666 (3) | 0.4848 (3) | 0.0172 (4) | 0.0476 (8) | |
C19 | 0.1460 (4) | 0.5739 (4) | 0.0047 (5) | 0.0687 (12) | |
H19 | 0.1321 | 0.6236 | −0.0791 | 0.082* | |
C20 | 0.0518 (4) | 0.5863 (5) | 0.1146 (6) | 0.0826 (14) | |
H20 | −0.0285 | 0.6438 | 0.1074 | 0.099* | |
C21 | 0.0730 (4) | 0.5152 (5) | 0.2367 (5) | 0.0785 (13) | |
H21 | 0.0080 | 0.5238 | 0.3133 | 0.094* | |
C22 | 0.1931 (3) | 0.4297 (4) | 0.2454 (4) | 0.0574 (9) | |
H22 | 0.2079 | 0.3810 | 0.3290 | 0.069* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.02575 (17) | 0.0496 (2) | 0.02596 (17) | 0.00529 (14) | −0.01248 (13) | −0.01034 (14) |
Cu2 | 0.03379 (18) | 0.0419 (2) | 0.02658 (17) | −0.00226 (14) | −0.01659 (14) | −0.00315 (14) |
Cl1 | 0.0507 (5) | 0.0529 (5) | 0.0608 (5) | −0.0018 (4) | −0.0240 (4) | −0.0067 (4) |
O1 | 0.0294 (10) | 0.0571 (13) | 0.0289 (10) | 0.0011 (9) | −0.0138 (8) | −0.0026 (9) |
O2 | 0.0403 (11) | 0.0438 (11) | 0.0292 (10) | −0.0081 (9) | −0.0158 (8) | 0.0006 (8) |
O3 | 0.0282 (9) | 0.0502 (12) | 0.0296 (10) | 0.0039 (8) | −0.0151 (8) | −0.0105 (8) |
O4 | 0.0334 (10) | 0.0532 (12) | 0.0258 (9) | −0.0028 (9) | −0.0129 (8) | −0.0096 (8) |
O5 | 0.0536 (15) | 0.0720 (17) | 0.0689 (17) | 0.0010 (13) | −0.0351 (13) | −0.0145 (14) |
N1 | 0.0244 (10) | 0.0417 (12) | 0.0231 (10) | 0.0004 (9) | −0.0092 (8) | −0.0078 (9) |
N2 | 0.0282 (11) | 0.0575 (15) | 0.0285 (12) | 0.0046 (10) | −0.0115 (9) | −0.0164 (11) |
N3 | 0.0329 (12) | 0.0540 (15) | 0.0382 (13) | 0.0111 (11) | −0.0171 (10) | −0.0148 (11) |
N4 | 0.0519 (15) | 0.0498 (15) | 0.0297 (12) | −0.0150 (12) | −0.0162 (11) | −0.0034 (11) |
N5 | 0.0436 (14) | 0.0383 (13) | 0.0547 (16) | 0.0007 (11) | −0.0311 (13) | −0.0069 (12) |
C1 | 0.0347 (14) | 0.0373 (14) | 0.0274 (13) | −0.0072 (11) | −0.0153 (11) | −0.0056 (11) |
C2 | 0.0309 (13) | 0.0364 (13) | 0.0266 (12) | −0.0058 (11) | −0.0106 (10) | −0.0069 (10) |
C3 | 0.0259 (12) | 0.0398 (14) | 0.0253 (12) | −0.0032 (10) | −0.0083 (10) | −0.0091 (10) |
C4 | 0.0356 (15) | 0.0536 (18) | 0.0316 (14) | 0.0056 (13) | −0.0118 (12) | −0.0118 (13) |
C5 | 0.0388 (16) | 0.063 (2) | 0.0429 (18) | 0.0118 (15) | −0.0093 (14) | −0.0205 (16) |
C6 | 0.0437 (17) | 0.066 (2) | 0.0341 (16) | −0.0028 (15) | −0.0025 (13) | −0.0217 (15) |
C7 | 0.0437 (16) | 0.0504 (17) | 0.0252 (13) | −0.0074 (13) | −0.0101 (12) | −0.0090 (12) |
C8 | 0.0276 (12) | 0.0364 (13) | 0.0271 (12) | −0.0025 (10) | −0.0118 (10) | −0.0061 (10) |
C9 | 0.0303 (13) | 0.0406 (14) | 0.0246 (12) | −0.0045 (11) | −0.0098 (10) | −0.0089 (10) |
C10 | 0.0336 (15) | 0.063 (2) | 0.0337 (15) | 0.0079 (13) | −0.0111 (12) | −0.0225 (14) |
C11 | 0.0495 (19) | 0.063 (2) | 0.0463 (18) | 0.0181 (16) | −0.0200 (15) | −0.0255 (16) |
C12A | 0.042 (3) | 0.084 (4) | 0.055 (3) | 0.020 (2) | −0.016 (2) | −0.036 (3) |
C12B | 0.112 (14) | 0.058 (9) | 0.117 (14) | 0.004 (9) | −0.066 (12) | −0.024 (9) |
C13 | 0.068 (2) | 0.073 (3) | 0.0412 (19) | −0.021 (2) | −0.0147 (17) | −0.0124 (17) |
C14 | 0.098 (3) | 0.094 (3) | 0.040 (2) | −0.046 (3) | 0.001 (2) | −0.021 (2) |
C15 | 0.119 (4) | 0.067 (3) | 0.047 (2) | −0.034 (3) | −0.041 (3) | 0.0037 (19) |
C16 | 0.108 (3) | 0.050 (2) | 0.046 (2) | −0.019 (2) | −0.042 (2) | 0.0016 (16) |
C17 | 0.074 (2) | 0.0365 (16) | 0.0495 (19) | −0.0190 (15) | −0.0427 (18) | 0.0069 (13) |
C18 | 0.0547 (19) | 0.0343 (15) | 0.057 (2) | −0.0049 (13) | −0.0352 (17) | −0.0029 (14) |
C19 | 0.072 (3) | 0.046 (2) | 0.086 (3) | −0.0003 (18) | −0.054 (3) | 0.0016 (19) |
C20 | 0.052 (2) | 0.069 (3) | 0.109 (4) | 0.017 (2) | −0.035 (3) | −0.018 (3) |
C21 | 0.049 (2) | 0.076 (3) | 0.094 (3) | 0.016 (2) | −0.023 (2) | −0.027 (3) |
C22 | 0.0433 (18) | 0.060 (2) | 0.061 (2) | 0.0070 (16) | −0.0201 (17) | −0.0166 (18) |
Cu1—Cl1 | 2.6832 (10) | C6—C7 | 1.372 (4) |
Cu1—N1 | 1.988 (2) | C6—H6 | 0.9300 |
Cu1—N2 | 1.925 (2) | C7—H7 | 0.9300 |
Cu1—N3 | 2.035 (2) | C8—C9 | 1.524 (4) |
Cu1—O1 | 1.9188 (19) | C10—C11 | 1.531 (4) |
Cu2—N4 | 1.961 (2) | C10—H10A | 0.9700 |
Cu2—N5 | 2.000 (3) | C10—H10B | 0.9700 |
Cu2—O2i | 2.276 (2) | C11—C12B | 1.456 (7) |
Cu2—O3 | 1.9586 (19) | C11—C12A | 1.466 (5) |
Cu2—O4 | 1.9430 (19) | C11—H11B | 0.9800 |
O1—C1 | 1.269 (3) | C11—H11A | 0.9800 |
O2—C1 | 1.248 (3) | C12A—H11A | 0.5960 |
O2—Cu2i | 2.276 (2) | C12A—H12A | 0.9600 |
O3—C8 | 1.273 (3) | C12A—H12B | 0.9600 |
O4—C9 | 1.280 (3) | C12A—H12C | 0.9600 |
O5—H5A | 0.9167 | C12B—H12D | 0.9600 |
O5—H5B | 0.8134 | C12B—H12E | 0.9600 |
N1—C8 | 1.310 (3) | C12B—H12F | 0.9600 |
N1—C3 | 1.414 (3) | C13—C14 | 1.408 (5) |
N2—C9 | 1.279 (3) | C13—H13 | 0.9300 |
N2—C10 | 1.451 (3) | C14—C15 | 1.375 (7) |
N3—C11 | 1.479 (4) | C14—H14 | 0.9300 |
N3—H3A | 0.9000 | C15—C16 | 1.352 (7) |
N3—H3B | 0.9000 | C15—H15 | 0.9300 |
N4—C13 | 1.318 (5) | C16—C17 | 1.387 (5) |
N4—C17 | 1.365 (4) | C16—H16 | 0.9300 |
N5—C22 | 1.324 (5) | C17—C18 | 1.445 (5) |
N5—C18 | 1.341 (4) | C18—C19 | 1.412 (5) |
C1—C2 | 1.511 (4) | C19—C20 | 1.338 (7) |
C2—C7 | 1.399 (4) | C19—H19 | 0.9300 |
C2—C3 | 1.410 (3) | C20—C21 | 1.356 (7) |
C3—C4 | 1.399 (4) | C20—H20 | 0.9300 |
C4—C5 | 1.383 (4) | C21—C22 | 1.386 (5) |
C4—H4 | 0.9300 | C21—H21 | 0.9300 |
C5—C6 | 1.379 (5) | C22—H22 | 0.9300 |
C5—H5 | 0.9300 | ||
N1—Cu1—N2 | 83.40 (9) | N1—C8—C9 | 115.1 (2) |
O3—Cu2—O4 | 85.23 (8) | N2—C9—O4 | 129.2 (3) |
O1—Cu1—N2 | 159.82 (11) | N2—C9—C8 | 114.2 (2) |
O1—Cu1—N1 | 93.77 (8) | O4—C9—C8 | 116.6 (2) |
O1—Cu1—N3 | 97.86 (9) | N2—C10—C11 | 105.8 (2) |
N2—Cu1—N3 | 82.10 (10) | N2—C10—H10A | 110.6 |
N1—Cu1—N3 | 164.39 (10) | C11—C10—H10A | 110.6 |
O1—Cu1—Cl1 | 97.77 (7) | N2—C10—H10B | 110.6 |
N2—Cu1—Cl1 | 102.41 (9) | C11—C10—H10B | 110.6 |
N1—Cu1—Cl1 | 97.27 (7) | H10A—C10—H10B | 108.7 |
N3—Cu1—Cl1 | 91.45 (9) | C12B—C11—C12A | 87.8 (8) |
O4—Cu2—N4 | 95.30 (10) | C12B—C11—N3 | 112.6 (6) |
O3—Cu2—N4 | 168.64 (10) | C12A—C11—N3 | 115.1 (3) |
O4—Cu2—N5 | 166.56 (10) | C12B—C11—C10 | 117.4 (6) |
O3—Cu2—N5 | 95.10 (10) | C12A—C11—C10 | 114.2 (3) |
N4—Cu2—N5 | 81.76 (12) | N3—C11—C10 | 108.7 (3) |
O4—Cu2—O2i | 101.63 (8) | C12A—C11—H11B | 106.0 |
O3—Cu2—O2i | 94.04 (8) | N3—C11—H11B | 106.0 |
N4—Cu2—O2i | 96.96 (9) | C10—C11—H11B | 106.0 |
N5—Cu2—O2i | 91.75 (9) | C12B—C11—H11A | 104.3 |
C1—O1—Cu1 | 127.26 (17) | N3—C11—H11A | 106.5 |
C1—O2—Cu2i | 114.78 (17) | C10—C11—H11A | 106.5 |
C8—O3—Cu2 | 111.56 (17) | H11B—C11—H11A | 122.6 |
C9—O4—Cu2 | 111.12 (17) | C11—C12A—H12A | 109.5 |
H5A—O5—H5B | 102.6 | H11A—C12A—H12A | 119.0 |
C8—N1—C3 | 124.3 (2) | C11—C12A—H12B | 109.5 |
C8—N1—Cu1 | 111.55 (17) | H11A—C12A—H12B | 81.6 |
C3—N1—Cu1 | 123.92 (16) | C11—C12A—H12C | 109.5 |
C9—N2—C10 | 126.4 (2) | H11A—C12A—H12C | 123.0 |
C9—N2—Cu1 | 115.30 (19) | C11—C12B—H12D | 109.5 |
C10—N2—Cu1 | 118.28 (18) | C11—C12B—H12E | 109.5 |
C11—N3—Cu1 | 108.06 (19) | H12D—C12B—H12E | 109.5 |
C11—N3—H3A | 110.1 | C11—C12B—H12F | 109.5 |
Cu1—N3—H3A | 110.1 | H12D—C12B—H12F | 109.5 |
C11—N3—H3B | 110.1 | H12E—C12B—H12F | 109.5 |
Cu1—N3—H3B | 110.1 | N4—C13—C14 | 121.7 (4) |
H3A—N3—H3B | 108.4 | N4—C13—H13 | 119.1 |
C13—N4—C17 | 120.6 (3) | C14—C13—H13 | 119.1 |
C13—N4—Cu2 | 125.4 (2) | C15—C14—C13 | 116.2 (4) |
C17—N4—Cu2 | 113.9 (2) | C15—C14—H14 | 121.9 |
C22—N5—C18 | 119.4 (3) | C13—C14—H14 | 121.9 |
C22—N5—Cu2 | 126.3 (2) | C16—C15—C14 | 123.1 (4) |
C18—N5—Cu2 | 114.0 (2) | C16—C15—H15 | 118.4 |
O2—C1—O1 | 121.3 (2) | C14—C15—H15 | 118.4 |
O2—C1—C2 | 117.4 (2) | C15—C16—C17 | 118.0 (4) |
O1—C1—C2 | 121.2 (2) | C15—C16—H16 | 121.0 |
C7—C2—C3 | 118.5 (2) | C17—C16—H16 | 121.0 |
C7—C2—C1 | 115.6 (2) | N4—C17—C16 | 120.3 (4) |
C3—C2—C1 | 125.9 (2) | N4—C17—C18 | 115.5 (3) |
C4—C3—C2 | 118.5 (2) | C16—C17—C18 | 124.1 (3) |
C4—C3—N1 | 122.3 (2) | N5—C18—C19 | 120.2 (4) |
C2—C3—N1 | 119.2 (2) | N5—C18—C17 | 114.6 (3) |
C5—C4—C3 | 121.1 (3) | C19—C18—C17 | 125.1 (3) |
C5—C4—H4 | 119.4 | C20—C19—C18 | 119.3 (4) |
C3—C4—H4 | 119.4 | C20—C19—H19 | 120.3 |
C6—C5—C4 | 120.6 (3) | C18—C19—H19 | 120.3 |
C6—C5—H5 | 119.7 | C19—C20—C21 | 120.2 (4) |
C4—C5—H5 | 119.7 | C19—C20—H20 | 119.9 |
C7—C6—C5 | 118.9 (3) | C21—C20—H20 | 119.9 |
C7—C6—H6 | 120.5 | C20—C21—C22 | 119.0 (4) |
C5—C6—H6 | 120.5 | C20—C21—H21 | 120.5 |
C6—C7—C2 | 122.3 (3) | C22—C21—H21 | 120.5 |
C6—C7—H7 | 118.8 | N5—C22—C21 | 121.8 (4) |
C2—C7—H7 | 118.8 | N5—C22—H22 | 119.1 |
O3—C8—N1 | 129.6 (2) | C21—C22—H22 | 119.1 |
O3—C8—C9 | 115.3 (2) | ||
Cu1—O1—C1—O2 | 155.8 (2) | Cu1—N1—C3—C4 | 154.7 (2) |
Cu2i—O2—C1—O1 | −103.9 (3) | C8—N1—C3—C2 | 162.3 (3) |
N2—Cu1—O1—C1 | −75.0 (4) | Cu1—N1—C3—C2 | −24.0 (4) |
N1—Cu1—O1—C1 | 6.1 (3) | C2—C3—C4—C5 | 0.4 (5) |
N3—Cu1—O1—C1 | −163.5 (3) | N1—C3—C4—C5 | −178.2 (3) |
Cl1—Cu1—O1—C1 | 104.0 (2) | C3—C4—C5—C6 | −1.7 (6) |
O4—Cu2—O3—C8 | 3.68 (19) | C4—C5—C6—C7 | 0.8 (6) |
N4—Cu2—O3—C8 | −89.5 (5) | C5—C6—C7—C2 | 1.3 (5) |
N5—Cu2—O3—C8 | −162.8 (2) | C3—C2—C7—C6 | −2.4 (5) |
O2i—Cu2—O3—C8 | 105.04 (19) | C1—C2—C7—C6 | 177.0 (3) |
O3—Cu2—O4—C9 | −2.40 (19) | Cu2—O3—C8—N1 | 176.9 (3) |
N4—Cu2—O4—C9 | 166.2 (2) | Cu2—O3—C8—C9 | −4.1 (3) |
N5—Cu2—O4—C9 | 89.6 (5) | C3—N1—C8—O3 | −2.4 (5) |
O2i—Cu2—O4—C9 | −95.55 (19) | Cu1—N1—C8—O3 | −176.8 (3) |
O1—Cu1—N1—C8 | −165.6 (2) | C3—N1—C8—C9 | 178.6 (2) |
N2—Cu1—N1—C8 | −5.7 (2) | Cu1—N1—C8—C9 | 4.2 (3) |
N3—Cu1—N1—C8 | −27.4 (5) | C10—N2—C9—O4 | −4.7 (5) |
Cl1—Cu1—N1—C8 | 96.05 (19) | Cu1—N2—C9—O4 | 173.6 (2) |
O1—Cu1—N1—C3 | 20.0 (2) | C10—N2—C9—C8 | 176.0 (3) |
N2—Cu1—N1—C3 | 179.9 (2) | Cu1—N2—C9—C8 | −5.8 (3) |
N3—Cu1—N1—C3 | 158.2 (3) | Cu2—O4—C9—N2 | −178.4 (3) |
Cl1—Cu1—N1—C3 | −78.4 (2) | Cu2—O4—C9—C8 | 0.9 (3) |
O1—Cu1—N2—C9 | 89.4 (3) | O3—C8—C9—N2 | −178.3 (3) |
N1—Cu1—N2—C9 | 6.4 (2) | N1—C8—C9—N2 | 0.8 (4) |
N3—Cu1—N2—C9 | −179.3 (2) | O3—C8—C9—O4 | 2.2 (4) |
Cl1—Cu1—N2—C9 | −89.6 (2) | N1—C8—C9—O4 | −178.6 (2) |
O1—Cu1—N2—C10 | −92.2 (3) | C9—N2—C10—C11 | −158.0 (3) |
N1—Cu1—N2—C10 | −175.1 (3) | Cu1—N2—C10—C11 | 23.7 (3) |
N3—Cu1—N2—C10 | −0.9 (2) | Cu1—N3—C11—C12B | −89.7 (7) |
Cl1—Cu1—N2—C10 | 88.8 (2) | Cu1—N3—C11—C12A | 171.8 (3) |
O1—Cu1—N3—C11 | 136.3 (2) | Cu1—N3—C11—C10 | 42.2 (3) |
N2—Cu1—N3—C11 | −23.3 (2) | N2—C10—C11—C12B | 87.2 (8) |
N1—Cu1—N3—C11 | −1.5 (5) | N2—C10—C11—C12A | −172.1 (4) |
Cl1—Cu1—N3—C11 | −125.7 (2) | N2—C10—C11—N3 | −42.1 (4) |
O4—Cu2—N4—C13 | 13.3 (3) | C17—N4—C13—C14 | 1.0 (6) |
O3—Cu2—N4—C13 | 105.5 (5) | Cu2—N4—C13—C14 | 178.4 (3) |
N5—Cu2—N4—C13 | −179.9 (3) | N4—C13—C14—C15 | −0.4 (6) |
O2i—Cu2—N4—C13 | −89.1 (3) | C13—C14—C15—C16 | −0.1 (7) |
O4—Cu2—N4—C17 | −169.1 (2) | C14—C15—C16—C17 | 0.1 (7) |
O3—Cu2—N4—C17 | −76.9 (6) | C13—N4—C17—C16 | −1.0 (5) |
N5—Cu2—N4—C17 | −2.3 (2) | Cu2—N4—C17—C16 | −178.7 (3) |
O2i—Cu2—N4—C17 | 88.4 (2) | C13—N4—C17—C18 | 178.5 (3) |
O4—Cu2—N5—C22 | −104.9 (5) | Cu2—N4—C17—C18 | 0.8 (4) |
O3—Cu2—N5—C22 | −14.2 (3) | C15—C16—C17—N4 | 0.4 (5) |
N4—Cu2—N5—C22 | 176.8 (3) | C15—C16—C17—C18 | −179.0 (4) |
O2i—Cu2—N5—C22 | 80.1 (3) | C22—N5—C18—C19 | 1.0 (5) |
O4—Cu2—N5—C18 | 81.8 (5) | Cu2—N5—C18—C19 | 174.7 (3) |
O3—Cu2—N5—C18 | 172.6 (2) | C22—N5—C18—C17 | −177.9 (3) |
N4—Cu2—N5—C18 | 3.6 (2) | Cu2—N5—C18—C17 | −4.1 (4) |
O2i—Cu2—N5—C18 | −93.2 (2) | N4—C17—C18—N5 | 2.2 (4) |
Cu2i—O2—C1—C2 | 79.0 (3) | C16—C17—C18—N5 | −178.3 (3) |
Cu1—O1—C1—C2 | −27.2 (4) | N4—C17—C18—C19 | −176.5 (3) |
O2—C1—C2—C7 | 24.4 (4) | C16—C17—C18—C19 | 2.9 (6) |
O1—C1—C2—C7 | −152.7 (3) | N5—C18—C19—C20 | −1.3 (6) |
O2—C1—C2—C3 | −156.3 (3) | C17—C18—C19—C20 | 177.4 (4) |
O1—C1—C2—C3 | 26.7 (4) | C18—C19—C20—C21 | 1.0 (7) |
C7—C2—C3—C4 | 1.5 (4) | C19—C20—C21—C22 | −0.3 (8) |
C1—C2—C3—C4 | −177.8 (3) | C18—N5—C22—C21 | −0.3 (6) |
C7—C2—C3—N1 | −179.8 (3) | Cu2—N5—C22—C21 | −173.2 (3) |
C1—C2—C3—N1 | 0.9 (4) | C20—C21—C22—N5 | −0.1 (7) |
C8—N1—C3—C4 | −19.1 (4) |
Symmetry code: (i) −x+1, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5A···Cl1 | 0.92 | 2.47 | 3.335 (3) | 159 |
O5—H5B···O2ii | 0.81 | 2.07 | 2.870 (3) | 168 |
N3—H3B···Cl1ii | 0.90 | 2.55 | 3.406 (2) | 158 |
N3—H3A···O1ii | 0.90 | 2.44 | 3.172 (3) | 138 |
C16—H16···Cl1iii | 0.93 | 2.70 | 3.549 (4) | 152 |
Symmetry codes: (ii) −x+2, −y, −z+1; (iii) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | [Cu4(C12H12N3O4)2Cl2(C10H8N2)2]·2H2O |
Mr | 1197.95 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 10.9622 (1), 11.1330 (2), 11.2876 (2) |
α, β, γ (°) | 67.072 (1), 69.842 (1), 72.688 (1) |
V (Å3) | 1169.57 (3) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 1.98 |
Crystal size (mm) | 0.28 × 0.22 × 0.17 |
Data collection | |
Diffractometer | Bruker APEX area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2008b) |
Tmin, Tmax | 0.607, 0.730 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 16602, 5441, 4353 |
Rint | 0.017 |
(sin θ/λ)max (Å−1) | 0.654 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.098, 1.04 |
No. of reflections | 5441 |
No. of parameters | 328 |
No. of restraints | 3 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.98, −0.78 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SHELXS97 (Sheldrick, 2008a), SHELXL97 (Sheldrick, 2008a), XP (Siemens, 1994) and CAMERON (Watkin et al., 1993), WinGX (Farrugia, 1999).
Cu1—Cl1 | 2.6832 (10) | Cu2—N4 | 1.961 (2) |
Cu1—N1 | 1.988 (2) | Cu2—N5 | 2.000 (3) |
Cu1—N2 | 1.925 (2) | Cu2—O2i | 2.276 (2) |
Cu1—N3 | 2.035 (2) | Cu2—O3 | 1.9586 (19) |
Cu1—O1 | 1.9188 (19) | Cu2—O4 | 1.9430 (19) |
N1—Cu1—N2 | 83.40 (9) | O3—Cu2—O4 | 85.23 (8) |
Cu1—O1—C1—O2 | 155.8 (2) | Cu2i—O2—C1—O1 | −103.9 (3) |
Symmetry code: (i) −x+1, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5A···Cl1 | 0.92 | 2.47 | 3.335 (3) | 159 |
O5—H5B···O2ii | 0.81 | 2.07 | 2.870 (3) | 168 |
N3—H3B···Cl1ii | 0.90 | 2.55 | 3.406 (2) | 158 |
N3—H3A···O1ii | 0.90 | 2.44 | 3.172 (3) | 138 |
C16—H16···Cl1iii | 0.93 | 2.70 | 3.549 (4) | 152 |
Symmetry codes: (ii) −x+2, −y, −z+1; (iii) −x+1, −y+1, −z. |
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It is known that N,N'-bis(substituted)oxamides could be good candidates in forming polynuclear complexes, because their coordinating ability toward transition-metal ions can be modified and tuned by changing the nature of the amide substituents (Ojima & Nonoyama, 1988). A typical feature of these ligands is an easy transformation of cis–trans conformations, which makes it practical to design tunable molecular materials with desired properties (Ruiz et al., 1999). To date, many polynuclear complexes containing oxamide bridges have been synthesized and their properties studied extensively (Messori et al., 2003; Wang et al., 2004). Compared with studies dealing with symmetrical N,N'-bis(substituted)oxamide polynuclear systems, relatively few studies dealing with dissymmetrical N,N'-bis(substituted)oxamide polynuclear complexes have been reported, owing to difficulties in the synthesis (Matović et al., 2005; Zang et al., 2003). However, the fact that those complexes bridged by dissymmetrical N,N'-bis(substituted)oxamides have shown predominant properties (Costes et al., 2000; Erxleben, 2001; Larionova et al., 1997; Pei et al., 1989, 1991) stimulated us to design and synthesize new polynuclear complexes with dissymmetrical N,N'-bis(substituted)oxamides to explore their special structures and functionalities. In continuation of our earlier work (Li et al., 2003, 2004; Liu et al., 2008), in this paper, a novel tetranuclear copper(II) complex bridged by an asymmetrical oxamide ligand, cis-N-(2-aminopropyl)-N'-(2-carboxylatophenyl)oxamidate(3-) (oxbm), and end-capped with 2,2'-bipyridine (bpy), namely, [Cu4(oxbm)2(bpy)2Cl2].2H2O, (I), has been synthesized, and the crystal structure of the complex is reported here.
A perspective view of complex (I) is depicted in Fig. 1, and selected bond lengths and angles are listed in Table 1. As shown in Fig. 1, the asymmetric unit can be considered as a cis-oxamide-bridged dinuclear copper(II) complex linked with a solvent water molecule by an O—H···Cl hydrogen bond, [Cu2(oxbm)(bpy)Cl].H2O. Through carboxyl bridges, a pair of units assemble to form a circular tetranuclear system with inversion symmetry. The cis-oxamide group coordinates to atoms Cu1 and Cu2 in an usual mode with bite angles of 83.40 (9) and 85.23 (8)°, respectively. The carboxyl group bridges Cu atoms in a nonplanar skew–skew fashion. The Cu1—O1—C1—O2 and Cu2i—O2—C1—O1 torsion angles [symmetry code: (i) -x + 1, -y, -z + 1; Table 1] are similar to those found in other complexes with skew–skew carboxyl bridges (Duan et al., 2006; Tong et al., 1997). The Cu···Cu separations through the oxamide and carboxyl bridges are 5.2096 (4) and 5.1961 (5) Å, respectively. To date, seven cyclic tetranuclear complexes with symmetrical oxamide bridges have been synthesized and structurally characterized (Abbati et al., 1999; Li et al., 2008; Ribas et al., 1998; Zhu et al., 2007). However, the title complex is the first instance of a dissymmetrical oxamide.
Atoms Cu1 and Cu2 are both in square-pyramidal coordination geometries with τ values of 0.08 and 0.03 (Addison et al., 1984), respectively. Atom Cu1 resides in an inner site of the cis-oxbm3- ligand; the basal plane is defined by atoms N1, N2, N3 and O1, and from the least-squares plane ddefined by these atoms the maximum displacement is 0.1073 (15) Å for N2 and the displacement of atom Cu1 is 0.2403 (13) Å. The apical position is occupied by atom Cl1. Atom Cu2 coordinates to the exo-cis O atoms of the oxbm3- ligand (O3 and O4), and the N atoms (N4 and N5) of the bpy ligand complete the basal plane, from which the maximum deviation is 0.0190 (12) Å (N4). The apical site is occupied by a carboxyl O atom (O2i). Atom Cu2 is pulled 0.2101 (12) Å out of the basal plane by the apical O2i atom.
The oxbm3- ligand chelates atom Cu1 to form two five-membered and a six-membered chelate rings. One of the five-membered rings is planar, and the other has an envelope conformation puckered on the chiral C11 atom, the puckering parameters (Cremer & Pople, 1975) being Q = 0.399 (3) Å and ϕ = 114.2 (4)°. The six-membered ring adopts a boat conformation with puckering parameters Q = 0.304 (3) Å, θ = 87.9 (6)° and ϕ = 300.8 (5)°. The Cu1—N1 and Cu1—N2 bonds are shorter than the Cu1—N3 bond (Table 1), which is consistent with the stronger donor ability of the deprotonated amide N atom compared with the primary amine N atom (Jubert et al., 2002).
In the crystal structure, neutral tetranuclear complexes and solvent water molecules are connected by classical hydrogen bonds into a one-dimensional chain parallel to the a axis (Table 2). The chains are linked through non-classical C—H···Cl hydrogen bonds into a two-dimensional hydrogen-bonding network extending along the (011) plane (Fig. 2). Moreover, offset π–π stacking is observed between the pyridine ring containing N4 and the phenyl ring belonging to a neighbouring complex, the nearest separation being 3.421 (4) Å for atom C6iv [symmetry code: (iv) x, y, z - 1; Fig. 3]. The stackings dominate the interactions between the hydrogen-bond layers and hold them together to create a three-dimensional supramolecular structure.