Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807040925/sj2336sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807040925/sj2336Isup2.hkl |
CCDC reference: 660160
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.005 Å
- R factor = 0.043
- wR factor = 0.113
- Data-to-parameter ratio = 17.4
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Cu1 - P1 .. 6.17 su
Alert level G PLAT794_ALERT_5_G Check Predicted Bond Valency for Cu1 (1) 1.00 PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 102
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 1 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
For general background, see: Krebs & Henkel (1991). For details of metal complexes of pyrimidine-2-thiolate, see: Cookson & Tiekink (1993); Cotton & Ilsley (1982); Su et al. (1999); Yap & Jensen (1992); Zhao et al. (2001). For details of the related thiones, see Karagiannidis et al. (1990); Lecomte et al. (1989). For a related structure, see: Li et al. (2004).
Sodium pyrimidine-2-thiolate was prepared through the reaction of pyrimidine-2-thione with sodium metal in dry tetrahydrofuran. To a stirred solution of Cu(NO3)2.3H2O (60.9 mg, 0.25 mmol) in methanol (5 ml) was added a methanol solution (5 ml) of sodium pyrimidine-2-thiolate (34.0 mg, 0.25 mmol) and a precipitate formed immediately. The resulting brown powder was added to a stirred solution of triphenylphosphine (130.2 mg, 0.5 mmol) in acetone (7 ml), forming a clear yellow solution. This was left standing at room temperature. Colorless block-shaped crystals of the title compound were obtained after two months. Yield: 55.6 mg (32%).
All H-atoms were positioned geometrically and refined using a riding model with C—H = 0.93 Å, Uiso = 1.2Ueq(C) for aromatic H-atoms.
Heterocyclic thiones have attracted much attention as ligands in metal complexes because of their relevance in biological systems (Krebs & Henkel, 1991). Pyrimidine-2-thione and the corresponding thiolate can adopt different coordination modes to yield a variety of coordination complexes (Cookson & Tiekink, 1993; Cotton & Ilsley, 1982; Karagiannidis et al., 1990; Lecomte et al., 1989; Su et al., 1999; Yap & Jensen, 1992; Zhao et al., 2001).
In the earlier study on the complex of copper(I) ion with both phosphine and a heterocyclic mercaptan, Li et al. have found that the heterocyclic thione ligands exist in the thione form in the adduct, the ligands coordinate in a monodentate fashion through the doubly bonded S atom (Li et al., 2004). In this work, the deprotonated ligand coordinates to the copper(I) ion in a chelate manner through an endocyclic N atom and the exocyclic S atom, giving the title complex (Fig. 1). The Cu atom exists in a tetrahedral environment.
A two-dimensional supramolecular network (Fig. 2) is formed by the intermolecular C—H···S hydrogen bonds [H···S 2.73 (3), 2.83 (2) Å; C—H···S 158.6 (1), 149.6 (1) °].
For general background, see: Krebs & Henkel (1991). For details of metal complexes of pyrimidine-2-thiolate, see: Cookson & Tiekink (1993); Cotton & Ilsley (1982); Su et al. (1999); Yap & Jensen (1992); Zhao et al. (2001). For details of the related thiones, see Karagiannidis et al. (1990); Lecomte et al. (1989). For a related structure, see: Li et al. (2004).
Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 2002); software used to prepare material for publication: SHELXTL.
[Cu(C4H3N2S)(C18H15P)2] | Z = 2 |
Mr = 699.22 | F(000) = 724 |
Triclinic, P1 | Dx = 1.313 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.3092 (6) Å | Cell parameters from 3662 reflections |
b = 11.0636 (7) Å | θ = 2.2–23.3° |
c = 18.8384 (12) Å | µ = 0.80 mm−1 |
α = 93.181 (1)° | T = 295 K |
β = 91.912 (2)° | Block, colourless |
γ = 113.810 (2)° | 0.28 × 0.25 × 0.20 mm |
V = 1769.1 (2) Å3 |
Bruker APEX area-detector diffractometer | 7227 independent reflections |
Radiation source: fine-focus sealed tube | 5598 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
φ and ω scans | θmax = 26.5°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −11→11 |
Tmin = 0.808, Tmax = 0.857 | k = −13→13 |
14456 measured reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.113 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0585P)2 + 0.2219P] where P = (Fo2 + 2Fc2)/3 |
7227 reflections | (Δ/σ)max = 0.001 |
415 parameters | Δρmax = 0.41 e Å−3 |
102 restraints | Δρmin = −0.37 e Å−3 |
[Cu(C4H3N2S)(C18H15P)2] | γ = 113.810 (2)° |
Mr = 699.22 | V = 1769.1 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.3092 (6) Å | Mo Kα radiation |
b = 11.0636 (7) Å | µ = 0.80 mm−1 |
c = 18.8384 (12) Å | T = 295 K |
α = 93.181 (1)° | 0.28 × 0.25 × 0.20 mm |
β = 91.912 (2)° |
Bruker APEX area-detector diffractometer | 7227 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 5598 reflections with I > 2σ(I) |
Tmin = 0.808, Tmax = 0.857 | Rint = 0.024 |
14456 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 102 restraints |
wR(F2) = 0.113 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.41 e Å−3 |
7227 reflections | Δρmin = −0.37 e Å−3 |
415 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu1 | 0.69666 (4) | 0.54945 (3) | 0.719137 (16) | 0.04441 (12) | |
S1 | 0.86486 (8) | 0.44086 (7) | 0.68664 (4) | 0.0569 (2) | |
P1 | 0.63061 (8) | 0.52595 (7) | 0.83325 (4) | 0.04319 (17) | |
P2 | 0.73004 (8) | 0.72462 (6) | 0.65674 (4) | 0.04140 (17) | |
N1 | 0.5631 (3) | 0.3595 (2) | 0.66490 (11) | 0.0485 (5) | |
N2 | 0.6660 (4) | 0.1983 (3) | 0.63669 (15) | 0.0736 (8) | |
C1 | 0.6832 (3) | 0.3203 (3) | 0.65968 (13) | 0.0487 (6) | |
C2 | 0.4191 (4) | 0.2706 (3) | 0.64506 (17) | 0.0679 (8) | |
H2 | 0.3348 | 0.2951 | 0.6477 | 0.082* | |
C3 | 0.3917 (5) | 0.1435 (4) | 0.6207 (2) | 0.0885 (12) | |
H3 | 0.2912 | 0.0809 | 0.6067 | 0.106* | |
C4 | 0.5206 (6) | 0.1146 (4) | 0.6183 (2) | 0.0921 (12) | |
H4 | 0.5046 | 0.0287 | 0.6024 | 0.110* | |
C5 | 0.5714 (3) | 0.3579 (3) | 0.86245 (14) | 0.0492 (6) | |
C6 | 0.6564 (4) | 0.2863 (3) | 0.84107 (17) | 0.0695 (9) | |
H6 | 0.7418 | 0.3244 | 0.8133 | 0.083* | |
C7 | 0.6150 (6) | 0.1576 (4) | 0.8607 (2) | 0.0943 (12) | |
H7 | 0.6732 | 0.1099 | 0.8468 | 0.113* | |
C8 | 0.4865 (6) | 0.1014 (4) | 0.9011 (2) | 0.0940 (13) | |
H8 | 0.4569 | 0.0149 | 0.9136 | 0.113* | |
C9 | 0.4043 (5) | 0.1710 (3) | 0.92248 (19) | 0.0798 (10) | |
H9 | 0.3194 | 0.1328 | 0.9505 | 0.096* | |
C10 | 0.4445 (4) | 0.2988 (3) | 0.90314 (16) | 0.0622 (8) | |
H10 | 0.3855 | 0.3453 | 0.9177 | 0.075* | |
C11 | 0.4607 (3) | 0.5631 (3) | 0.85071 (14) | 0.0463 (6) | |
C12 | 0.3271 (3) | 0.4996 (3) | 0.80554 (18) | 0.0672 (8) | |
H12 | 0.3264 | 0.4394 | 0.7689 | 0.081* | |
C13 | 0.1948 (4) | 0.5252 (4) | 0.8146 (2) | 0.0862 (11) | |
H13 | 0.1045 | 0.4798 | 0.7851 | 0.103* | |
C14 | 0.1963 (4) | 0.6172 (4) | 0.8668 (2) | 0.0851 (11) | |
H14 | 0.1083 | 0.6362 | 0.8719 | 0.102* | |
C15 | 0.3260 (4) | 0.6802 (4) | 0.9110 (2) | 0.0783 (10) | |
H15 | 0.3267 | 0.7419 | 0.9468 | 0.094* | |
C16 | 0.4579 (3) | 0.6535 (3) | 0.90348 (16) | 0.0588 (7) | |
H16 | 0.5461 | 0.6972 | 0.9345 | 0.071* | |
C17 | 0.7791 (3) | 0.6296 (3) | 0.90186 (14) | 0.0457 (6) | |
C18 | 0.8176 (3) | 0.5834 (3) | 0.96336 (15) | 0.0600 (7) | |
H18 | 0.7650 | 0.4946 | 0.9719 | 0.072* | |
C19 | 0.9331 (4) | 0.6677 (4) | 1.01194 (18) | 0.0782 (10) | |
H19 | 0.9580 | 0.6352 | 1.0529 | 0.094* | |
C20 | 1.0117 (4) | 0.7987 (4) | 1.0007 (2) | 0.0820 (11) | |
H20 | 1.0899 | 0.8552 | 1.0336 | 0.098* | |
C21 | 0.9738 (4) | 0.8456 (3) | 0.9405 (2) | 0.0796 (10) | |
H21 | 1.0260 | 0.9348 | 0.9328 | 0.095* | |
C22 | 0.8588 (3) | 0.7619 (3) | 0.89089 (16) | 0.0610 (8) | |
H22 | 0.8350 | 0.7951 | 0.8499 | 0.073* | |
C23 | 0.8644 (3) | 0.8830 (2) | 0.70027 (14) | 0.0453 (6) | |
C24 | 1.0025 (3) | 0.8879 (3) | 0.73323 (17) | 0.0609 (8) | |
H24 | 1.0219 | 0.8116 | 0.7327 | 0.073* | |
C25 | 1.1113 (4) | 1.0045 (4) | 0.7668 (2) | 0.0801 (10) | |
H25 | 1.2046 | 1.0071 | 0.7876 | 0.096* | |
C26 | 1.0822 (5) | 1.1159 (4) | 0.7695 (2) | 0.0862 (11) | |
H26 | 1.1542 | 1.1937 | 0.7935 | 0.103* | |
C27 | 0.9471 (5) | 1.1137 (3) | 0.7370 (2) | 0.0795 (10) | |
H27 | 0.9285 | 1.1903 | 0.7383 | 0.095* | |
C28 | 0.8389 (4) | 0.9980 (3) | 0.70238 (17) | 0.0628 (8) | |
H28 | 0.7478 | 0.9972 | 0.6802 | 0.075* | |
C29 | 0.8153 (3) | 0.7232 (2) | 0.57102 (14) | 0.0481 (6) | |
C30 | 0.9305 (4) | 0.8340 (3) | 0.54663 (16) | 0.0670 (7) | |
H30 | 0.9631 | 0.9150 | 0.5731 | 0.080* | |
C31 | 0.9983 (4) | 0.8262 (3) | 0.48327 (16) | 0.0773 (8) | |
H31 | 1.0765 | 0.9019 | 0.4679 | 0.093* | |
C32 | 0.9520 (4) | 0.7095 (3) | 0.44330 (17) | 0.0757 (8) | |
H32 | 0.9956 | 0.7051 | 0.4000 | 0.091* | |
C33 | 0.8406 (5) | 0.5990 (3) | 0.46774 (18) | 0.0904 (10) | |
H33 | 0.8091 | 0.5183 | 0.4410 | 0.108* | |
C34 | 0.7732 (4) | 0.6044 (3) | 0.53167 (16) | 0.0789 (9) | |
H34 | 0.6992 | 0.5274 | 0.5480 | 0.095* | |
C35 | 0.5498 (3) | 0.7466 (2) | 0.63579 (14) | 0.0464 (6) | |
C36 | 0.4941 (4) | 0.7507 (3) | 0.56753 (16) | 0.0604 (7) | |
H36 | 0.5546 | 0.7508 | 0.5292 | 0.072* | |
C37 | 0.3480 (4) | 0.7547 (3) | 0.55584 (19) | 0.0726 (9) | |
H37 | 0.3111 | 0.7566 | 0.5096 | 0.087* | |
C38 | 0.2587 (4) | 0.7559 (3) | 0.6109 (2) | 0.0772 (10) | |
H38 | 0.1599 | 0.7564 | 0.6026 | 0.093* | |
C39 | 0.3152 (4) | 0.7562 (4) | 0.6786 (2) | 0.0886 (11) | |
H39 | 0.2562 | 0.7606 | 0.7168 | 0.106* | |
C40 | 0.4580 (4) | 0.7501 (4) | 0.69101 (18) | 0.0727 (9) | |
H40 | 0.4935 | 0.7483 | 0.7375 | 0.087* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0511 (2) | 0.04317 (19) | 0.0439 (2) | 0.02402 (15) | 0.00632 (14) | 0.00292 (14) |
S1 | 0.0506 (4) | 0.0616 (4) | 0.0663 (5) | 0.0324 (4) | 0.0010 (3) | −0.0061 (4) |
P1 | 0.0432 (4) | 0.0455 (4) | 0.0410 (4) | 0.0181 (3) | 0.0044 (3) | 0.0025 (3) |
P2 | 0.0434 (4) | 0.0419 (4) | 0.0441 (4) | 0.0224 (3) | 0.0061 (3) | 0.0038 (3) |
N1 | 0.0483 (13) | 0.0478 (13) | 0.0477 (13) | 0.0185 (11) | −0.0026 (10) | 0.0012 (10) |
N2 | 0.091 (2) | 0.0479 (15) | 0.085 (2) | 0.0330 (15) | 0.0004 (16) | −0.0061 (14) |
C1 | 0.0646 (17) | 0.0501 (16) | 0.0392 (14) | 0.0313 (14) | 0.0034 (12) | 0.0029 (12) |
C2 | 0.0587 (19) | 0.069 (2) | 0.066 (2) | 0.0175 (17) | −0.0041 (16) | −0.0010 (17) |
C3 | 0.080 (3) | 0.063 (2) | 0.090 (3) | −0.001 (2) | −0.007 (2) | −0.008 (2) |
C4 | 0.112 (3) | 0.051 (2) | 0.103 (3) | 0.025 (2) | −0.001 (3) | −0.009 (2) |
C5 | 0.0587 (17) | 0.0444 (15) | 0.0402 (14) | 0.0170 (13) | −0.0016 (12) | 0.0023 (11) |
C6 | 0.090 (2) | 0.064 (2) | 0.064 (2) | 0.0401 (18) | 0.0112 (17) | 0.0156 (16) |
C7 | 0.142 (4) | 0.073 (2) | 0.088 (3) | 0.063 (3) | 0.002 (3) | 0.013 (2) |
C8 | 0.128 (4) | 0.054 (2) | 0.082 (3) | 0.019 (2) | −0.010 (3) | 0.0170 (19) |
C9 | 0.083 (2) | 0.058 (2) | 0.073 (2) | 0.0021 (19) | −0.0011 (19) | 0.0115 (18) |
C10 | 0.0599 (18) | 0.0561 (18) | 0.0577 (18) | 0.0103 (15) | 0.0012 (15) | 0.0053 (14) |
C11 | 0.0391 (14) | 0.0517 (15) | 0.0470 (15) | 0.0164 (12) | 0.0065 (11) | 0.0075 (12) |
C12 | 0.0494 (18) | 0.075 (2) | 0.071 (2) | 0.0196 (16) | −0.0019 (15) | −0.0011 (17) |
C13 | 0.0455 (19) | 0.112 (3) | 0.093 (3) | 0.023 (2) | −0.0074 (18) | 0.023 (2) |
C14 | 0.056 (2) | 0.109 (3) | 0.111 (3) | 0.050 (2) | 0.023 (2) | 0.036 (3) |
C15 | 0.075 (2) | 0.091 (3) | 0.088 (3) | 0.052 (2) | 0.025 (2) | 0.009 (2) |
C16 | 0.0509 (17) | 0.0708 (19) | 0.0595 (18) | 0.0298 (15) | 0.0061 (14) | 0.0011 (15) |
C17 | 0.0368 (13) | 0.0563 (16) | 0.0443 (15) | 0.0190 (12) | 0.0064 (11) | 0.0017 (12) |
C18 | 0.0527 (17) | 0.0684 (19) | 0.0546 (18) | 0.0200 (15) | 0.0019 (14) | 0.0086 (15) |
C19 | 0.068 (2) | 0.101 (3) | 0.058 (2) | 0.028 (2) | −0.0135 (17) | 0.0042 (19) |
C20 | 0.060 (2) | 0.090 (3) | 0.076 (2) | 0.014 (2) | −0.0164 (18) | −0.016 (2) |
C21 | 0.076 (2) | 0.061 (2) | 0.084 (3) | 0.0115 (18) | −0.002 (2) | −0.0094 (19) |
C22 | 0.0618 (19) | 0.0542 (17) | 0.0578 (18) | 0.0147 (15) | −0.0005 (15) | 0.0020 (14) |
C23 | 0.0466 (15) | 0.0428 (14) | 0.0474 (15) | 0.0184 (12) | 0.0081 (12) | 0.0050 (11) |
C24 | 0.0468 (16) | 0.0636 (19) | 0.073 (2) | 0.0239 (15) | 0.0011 (15) | 0.0033 (16) |
C25 | 0.0542 (19) | 0.084 (3) | 0.086 (3) | 0.0127 (18) | −0.0102 (17) | 0.003 (2) |
C26 | 0.084 (3) | 0.060 (2) | 0.083 (3) | 0.000 (2) | −0.002 (2) | −0.0084 (19) |
C27 | 0.103 (3) | 0.0465 (18) | 0.086 (3) | 0.0284 (19) | 0.002 (2) | −0.0038 (17) |
C28 | 0.072 (2) | 0.0522 (17) | 0.068 (2) | 0.0309 (16) | −0.0038 (16) | −0.0023 (15) |
C29 | 0.0581 (14) | 0.0497 (13) | 0.0487 (14) | 0.0332 (11) | 0.0119 (11) | 0.0103 (11) |
C30 | 0.0793 (18) | 0.0625 (15) | 0.0639 (16) | 0.0313 (14) | 0.0215 (14) | 0.0124 (13) |
C31 | 0.090 (2) | 0.0798 (17) | 0.0699 (18) | 0.0386 (16) | 0.0323 (15) | 0.0246 (14) |
C32 | 0.104 (2) | 0.0863 (18) | 0.0624 (17) | 0.0607 (16) | 0.0352 (15) | 0.0200 (14) |
C33 | 0.140 (2) | 0.0690 (17) | 0.0681 (18) | 0.0476 (17) | 0.0362 (17) | 0.0004 (15) |
C34 | 0.118 (2) | 0.0542 (15) | 0.0610 (17) | 0.0294 (15) | 0.0303 (16) | 0.0032 (13) |
C35 | 0.0458 (14) | 0.0447 (14) | 0.0530 (15) | 0.0222 (12) | 0.0049 (12) | 0.0072 (12) |
C36 | 0.0608 (17) | 0.0711 (19) | 0.0539 (17) | 0.0329 (15) | −0.0031 (14) | −0.0019 (15) |
C37 | 0.0632 (19) | 0.084 (2) | 0.074 (2) | 0.0354 (18) | −0.0173 (17) | 0.0002 (18) |
C38 | 0.0539 (18) | 0.086 (2) | 0.103 (3) | 0.0386 (17) | 0.0008 (18) | 0.022 (2) |
C39 | 0.074 (2) | 0.131 (3) | 0.095 (2) | 0.071 (2) | 0.0334 (19) | 0.040 (2) |
C40 | 0.071 (2) | 0.113 (3) | 0.0630 (19) | 0.0626 (19) | 0.0187 (16) | 0.0266 (18) |
Cu1—N1 | 2.139 (2) | C17—C18 | 1.385 (4) |
Cu1—P2 | 2.2417 (7) | C18—C19 | 1.376 (4) |
Cu1—P1 | 2.2557 (7) | C18—H18 | 0.9300 |
Cu1—S1 | 2.4023 (7) | C19—C20 | 1.368 (5) |
S1—C1 | 1.715 (3) | C19—H19 | 0.9300 |
P1—C11 | 1.823 (3) | C20—C21 | 1.365 (5) |
P1—C17 | 1.826 (3) | C20—H20 | 0.9300 |
P1—C5 | 1.836 (3) | C21—C22 | 1.384 (4) |
P2—C23 | 1.820 (3) | C21—H21 | 0.9300 |
P2—C35 | 1.824 (3) | C22—H22 | 0.9300 |
P2—C29 | 1.825 (3) | C23—C28 | 1.383 (4) |
N1—C2 | 1.329 (4) | C23—C24 | 1.389 (4) |
N1—C1 | 1.357 (3) | C24—C25 | 1.379 (4) |
N2—C4 | 1.315 (5) | C24—H24 | 0.9300 |
N2—C1 | 1.338 (3) | C25—C26 | 1.364 (5) |
C2—C3 | 1.373 (5) | C25—H25 | 0.9300 |
C2—H2 | 0.9300 | C26—C27 | 1.370 (5) |
C3—C4 | 1.363 (5) | C26—H26 | 0.9300 |
C3—H3 | 0.9300 | C27—C28 | 1.379 (4) |
C4—H4 | 0.9300 | C27—H27 | 0.9300 |
C5—C10 | 1.379 (4) | C28—H28 | 0.9300 |
C5—C6 | 1.380 (4) | C29—C34 | 1.373 (3) |
C6—C7 | 1.393 (5) | C29—C30 | 1.378 (3) |
C6—H6 | 0.9300 | C30—C31 | 1.383 (3) |
C7—C8 | 1.382 (6) | C30—H30 | 0.9300 |
C7—H7 | 0.9300 | C31—C32 | 1.357 (3) |
C8—C9 | 1.342 (6) | C31—H31 | 0.9300 |
C8—H8 | 0.9300 | C32—C33 | 1.361 (4) |
C9—C10 | 1.382 (4) | C32—H32 | 0.9300 |
C9—H9 | 0.9300 | C33—C34 | 1.386 (3) |
C10—H10 | 0.9300 | C33—H33 | 0.9300 |
C11—C16 | 1.379 (4) | C34—H34 | 0.9300 |
C11—C12 | 1.386 (4) | C35—C40 | 1.377 (4) |
C12—C13 | 1.384 (5) | C35—C36 | 1.380 (4) |
C12—H12 | 0.9300 | C36—C37 | 1.390 (4) |
C13—C14 | 1.373 (5) | C36—H36 | 0.9300 |
C13—H13 | 0.9300 | C37—C38 | 1.353 (5) |
C14—C15 | 1.351 (5) | C37—H37 | 0.9300 |
C14—H14 | 0.9300 | C38—C39 | 1.362 (5) |
C15—C16 | 1.384 (4) | C38—H38 | 0.9300 |
C15—H15 | 0.9300 | C39—C40 | 1.372 (4) |
C16—H16 | 0.9300 | C39—H39 | 0.9300 |
C17—C22 | 1.379 (4) | C40—H40 | 0.9300 |
N1—Cu1—P2 | 115.81 (6) | C22—C17—P1 | 117.5 (2) |
N1—Cu1—P1 | 104.82 (6) | C18—C17—P1 | 124.2 (2) |
P2—Cu1—P1 | 126.43 (3) | C19—C18—C17 | 120.6 (3) |
N1—Cu1—S1 | 69.28 (6) | C19—C18—H18 | 119.7 |
P2—Cu1—S1 | 113.43 (3) | C17—C18—H18 | 119.7 |
P1—Cu1—S1 | 112.70 (3) | C20—C19—C18 | 120.8 (3) |
C1—S1—Cu1 | 78.83 (9) | C20—C19—H19 | 119.6 |
C11—P1—C17 | 103.64 (12) | C18—C19—H19 | 119.6 |
C11—P1—C5 | 102.95 (13) | C21—C20—C19 | 119.2 (3) |
C17—P1—C5 | 103.71 (12) | C21—C20—H20 | 120.4 |
C11—P1—Cu1 | 112.67 (9) | C19—C20—H20 | 120.4 |
C17—P1—Cu1 | 116.99 (8) | C20—C21—C22 | 120.8 (3) |
C5—P1—Cu1 | 115.25 (9) | C20—C21—H21 | 119.6 |
C23—P2—C35 | 104.69 (12) | C22—C21—H21 | 119.6 |
C23—P2—C29 | 102.33 (12) | C17—C22—C21 | 120.4 (3) |
C35—P2—C29 | 104.72 (12) | C17—C22—H22 | 119.8 |
C23—P2—Cu1 | 114.48 (9) | C21—C22—H22 | 119.8 |
C35—P2—Cu1 | 114.47 (9) | C28—C23—C24 | 118.2 (3) |
C29—P2—Cu1 | 114.79 (8) | C28—C23—P2 | 124.7 (2) |
C2—N1—C1 | 117.5 (3) | C24—C23—P2 | 117.1 (2) |
C2—N1—Cu1 | 144.9 (2) | C25—C24—C23 | 120.7 (3) |
C1—N1—Cu1 | 96.93 (16) | C25—C24—H24 | 119.7 |
C4—N2—C1 | 115.3 (3) | C23—C24—H24 | 119.7 |
N2—C1—N1 | 124.4 (3) | C26—C25—C24 | 120.1 (3) |
N2—C1—S1 | 121.1 (2) | C26—C25—H25 | 119.9 |
N1—C1—S1 | 114.42 (19) | C24—C25—H25 | 120.0 |
N1—C2—C3 | 121.6 (3) | C25—C26—C27 | 120.2 (3) |
N1—C2—H2 | 119.2 | C25—C26—H26 | 119.9 |
C3—C2—H2 | 119.2 | C27—C26—H26 | 119.9 |
C4—C3—C2 | 116.0 (3) | C26—C27—C28 | 120.0 (3) |
C4—C3—H3 | 122.0 | C26—C27—H27 | 120.0 |
C2—C3—H3 | 122.0 | C28—C27—H27 | 120.0 |
N2—C4—C3 | 125.2 (3) | C27—C28—C23 | 120.8 (3) |
N2—C4—H4 | 117.4 | C27—C28—H28 | 119.6 |
C3—C4—H4 | 117.4 | C23—C28—H28 | 119.6 |
C10—C5—C6 | 118.6 (3) | C34—C29—C30 | 118.1 (3) |
C10—C5—P1 | 123.3 (2) | C34—C29—P2 | 118.7 (2) |
C6—C5—P1 | 118.1 (2) | C30—C29—P2 | 122.9 (2) |
C5—C6—C7 | 120.5 (3) | C29—C30—C31 | 120.8 (3) |
C5—C6—H6 | 119.8 | C29—C30—H30 | 119.6 |
C7—C6—H6 | 119.8 | C31—C30—H30 | 119.6 |
C8—C7—C6 | 119.2 (4) | C32—C31—C30 | 120.8 (3) |
C8—C7—H7 | 120.4 | C32—C31—H31 | 119.6 |
C6—C7—H7 | 120.4 | C30—C31—H31 | 119.6 |
C9—C8—C7 | 120.5 (4) | C31—C32—C33 | 118.7 (3) |
C9—C8—H8 | 119.8 | C31—C32—H32 | 120.6 |
C7—C8—H8 | 119.8 | C33—C32—H32 | 120.6 |
C8—C9—C10 | 120.6 (4) | C32—C33—C34 | 121.3 (3) |
C8—C9—H9 | 119.7 | C32—C33—H33 | 119.4 |
C10—C9—H9 | 119.7 | C34—C33—H33 | 119.4 |
C5—C10—C9 | 120.6 (3) | C29—C34—C33 | 120.2 (3) |
C5—C10—H10 | 119.7 | C29—C34—H34 | 119.9 |
C9—C10—H10 | 119.7 | C33—C34—H34 | 119.9 |
C16—C11—C12 | 117.9 (3) | C40—C35—C36 | 117.9 (3) |
C16—C11—P1 | 124.8 (2) | C40—C35—P2 | 117.9 (2) |
C12—C11—P1 | 117.3 (2) | C36—C35—P2 | 124.0 (2) |
C13—C12—C11 | 120.5 (3) | C35—C36—C37 | 120.2 (3) |
C13—C12—H12 | 119.7 | C35—C36—H36 | 119.9 |
C11—C12—H12 | 119.7 | C37—C36—H36 | 119.9 |
C14—C13—C12 | 120.3 (3) | C38—C37—C36 | 120.8 (3) |
C14—C13—H13 | 119.9 | C38—C37—H37 | 119.6 |
C12—C13—H13 | 119.9 | C36—C37—H37 | 119.6 |
C15—C14—C13 | 119.8 (3) | C37—C38—C39 | 119.2 (3) |
C15—C14—H14 | 120.1 | C37—C38—H38 | 120.4 |
C13—C14—H14 | 120.1 | C39—C38—H38 | 120.4 |
C14—C15—C16 | 120.5 (3) | C38—C39—C40 | 120.7 (3) |
C14—C15—H15 | 119.8 | C38—C39—H39 | 119.7 |
C16—C15—H15 | 119.8 | C40—C39—H39 | 119.7 |
C11—C16—C15 | 121.0 (3) | C39—C40—C35 | 121.1 (3) |
C11—C16—H16 | 119.5 | C39—C40—H40 | 119.4 |
C15—C16—H16 | 119.5 | C35—C40—H40 | 119.4 |
C22—C17—C18 | 118.3 (3) | ||
N1—Cu1—S1—C1 | −4.01 (11) | C11—C12—C13—C14 | 2.3 (5) |
P2—Cu1—S1—C1 | −114.09 (9) | C12—C13—C14—C15 | −2.0 (6) |
P1—Cu1—S1—C1 | 93.93 (9) | C13—C14—C15—C16 | 0.6 (6) |
N1—Cu1—P1—C11 | −89.40 (11) | C12—C11—C16—C15 | −0.1 (4) |
P2—Cu1—P1—C11 | 49.62 (10) | P1—C11—C16—C15 | 177.0 (2) |
S1—Cu1—P1—C11 | −162.77 (10) | C14—C15—C16—C11 | 0.4 (5) |
N1—Cu1—P1—C17 | 150.64 (12) | C11—P1—C17—C22 | −79.2 (2) |
P2—Cu1—P1—C17 | −70.34 (10) | C5—P1—C17—C22 | 173.5 (2) |
S1—Cu1—P1—C17 | 77.26 (10) | Cu1—P1—C17—C22 | 45.4 (2) |
N1—Cu1—P1—C5 | 28.35 (12) | C11—P1—C17—C18 | 101.6 (2) |
P2—Cu1—P1—C5 | 167.37 (10) | C5—P1—C17—C18 | −5.7 (3) |
S1—Cu1—P1—C5 | −45.03 (11) | Cu1—P1—C17—C18 | −133.8 (2) |
N1—Cu1—P2—C23 | −172.61 (11) | C22—C17—C18—C19 | −0.3 (4) |
P1—Cu1—P2—C23 | 52.16 (10) | P1—C17—C18—C19 | 178.9 (2) |
S1—Cu1—P2—C23 | −95.24 (9) | C17—C18—C19—C20 | 0.3 (5) |
N1—Cu1—P2—C35 | 66.51 (12) | C18—C19—C20—C21 | 0.2 (6) |
P1—Cu1—P2—C35 | −68.72 (10) | C19—C20—C21—C22 | −0.7 (6) |
S1—Cu1—P2—C35 | 143.87 (10) | C18—C17—C22—C21 | −0.1 (4) |
N1—Cu1—P2—C29 | −54.66 (12) | P1—C17—C22—C21 | −179.4 (2) |
P1—Cu1—P2—C29 | 170.11 (10) | C20—C21—C22—C17 | 0.6 (5) |
S1—Cu1—P2—C29 | 22.70 (10) | C35—P2—C23—C28 | −11.3 (3) |
P2—Cu1—N1—C2 | −79.7 (4) | C29—P2—C23—C28 | 97.8 (3) |
P1—Cu1—N1—C2 | 64.5 (4) | Cu1—P2—C23—C28 | −137.4 (2) |
S1—Cu1—N1—C2 | 173.5 (4) | C35—P2—C23—C24 | 169.1 (2) |
P2—Cu1—N1—C1 | 111.82 (14) | C29—P2—C23—C24 | −81.8 (2) |
P1—Cu1—N1—C1 | −104.06 (15) | Cu1—P2—C23—C24 | 43.0 (2) |
S1—Cu1—N1—C1 | 5.01 (14) | C28—C23—C24—C25 | −0.3 (4) |
C4—N2—C1—N1 | 0.2 (5) | P2—C23—C24—C25 | 179.4 (2) |
C4—N2—C1—S1 | 179.3 (3) | C23—C24—C25—C26 | 1.7 (5) |
C2—N1—C1—N2 | −0.7 (4) | C24—C25—C26—C27 | −2.1 (6) |
Cu1—N1—C1—N2 | 171.9 (2) | C25—C26—C27—C28 | 1.1 (6) |
C2—N1—C1—S1 | −179.8 (2) | C26—C27—C28—C23 | 0.3 (5) |
Cu1—N1—C1—S1 | −7.21 (19) | C24—C23—C28—C27 | −0.7 (4) |
Cu1—S1—C1—N2 | −172.6 (2) | P2—C23—C28—C27 | 179.7 (2) |
Cu1—S1—C1—N1 | 6.50 (17) | C23—P2—C29—C34 | 161.5 (3) |
C1—N1—C2—C3 | 0.5 (5) | C35—P2—C29—C34 | −89.5 (3) |
Cu1—N1—C2—C3 | −166.6 (3) | Cu1—P2—C29—C34 | 36.9 (3) |
N1—C2—C3—C4 | 0.1 (6) | C23—P2—C29—C30 | −12.7 (3) |
C1—N2—C4—C3 | 0.5 (6) | C35—P2—C29—C30 | 96.4 (3) |
C2—C3—C4—N2 | −0.6 (6) | Cu1—P2—C29—C30 | −137.3 (2) |
C11—P1—C5—C10 | −13.9 (3) | C34—C29—C30—C31 | 1.8 (5) |
C17—P1—C5—C10 | 93.9 (2) | P2—C29—C30—C31 | 176.1 (3) |
Cu1—P1—C5—C10 | −136.9 (2) | C29—C30—C31—C32 | 0.5 (5) |
C11—P1—C5—C6 | 164.6 (2) | C30—C31—C32—C33 | −1.9 (6) |
C17—P1—C5—C6 | −87.7 (2) | C31—C32—C33—C34 | 0.8 (6) |
Cu1—P1—C5—C6 | 41.5 (3) | C30—C29—C34—C33 | −2.9 (5) |
C10—C5—C6—C7 | −0.4 (5) | P2—C29—C34—C33 | −177.3 (3) |
P1—C5—C6—C7 | −179.0 (3) | C32—C33—C34—C29 | 1.6 (6) |
C5—C6—C7—C8 | 0.8 (6) | C23—P2—C35—C40 | −73.4 (3) |
C6—C7—C8—C9 | −1.3 (6) | C29—P2—C35—C40 | 179.3 (2) |
C7—C8—C9—C10 | 1.4 (6) | Cu1—P2—C35—C40 | 52.8 (3) |
C6—C5—C10—C9 | 0.5 (4) | C23—P2—C35—C36 | 111.3 (3) |
P1—C5—C10—C9 | 178.9 (2) | C29—P2—C35—C36 | 4.0 (3) |
C8—C9—C10—C5 | −1.0 (5) | Cu1—P2—C35—C36 | −122.5 (2) |
C17—P1—C11—C16 | 1.8 (3) | C40—C35—C36—C37 | −1.6 (5) |
C5—P1—C11—C16 | 109.6 (3) | P2—C35—C36—C37 | 173.7 (2) |
Cu1—P1—C11—C16 | −125.6 (2) | C35—C36—C37—C38 | 0.6 (5) |
C17—P1—C11—C12 | 178.9 (2) | C36—C37—C38—C39 | 1.5 (6) |
C5—P1—C11—C12 | −73.2 (2) | C37—C38—C39—C40 | −2.6 (6) |
Cu1—P1—C11—C12 | 51.5 (2) | C38—C39—C40—C35 | 1.5 (6) |
C16—C11—C12—C13 | −1.2 (5) | C36—C35—C40—C39 | 0.6 (5) |
P1—C11—C12—C13 | −178.6 (3) | P2—C35—C40—C39 | −175.0 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···S1 | 0.93 | 2.83 | 3.661 (3) | 150 |
C13—H13···S1i | 0.93 | 2.73 | 3.613 (4) | 159 |
Symmetry code: (i) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C4H3N2S)(C18H15P)2] |
Mr | 699.22 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 295 |
a, b, c (Å) | 9.3092 (6), 11.0636 (7), 18.8384 (12) |
α, β, γ (°) | 93.181 (1), 91.912 (2), 113.810 (2) |
V (Å3) | 1769.1 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.80 |
Crystal size (mm) | 0.28 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Bruker APEX area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.808, 0.857 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14456, 7227, 5598 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.113, 1.01 |
No. of reflections | 7227 |
No. of parameters | 415 |
No. of restraints | 102 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.41, −0.37 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 2002), SHELXTL.
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···S1 | 0.93 | 2.83 | 3.661 (3) | 149.6 |
C13—H13···S1i | 0.93 | 2.73 | 3.613 (4) | 158.6 |
Symmetry code: (i) x−1, y, z. |
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Heterocyclic thiones have attracted much attention as ligands in metal complexes because of their relevance in biological systems (Krebs & Henkel, 1991). Pyrimidine-2-thione and the corresponding thiolate can adopt different coordination modes to yield a variety of coordination complexes (Cookson & Tiekink, 1993; Cotton & Ilsley, 1982; Karagiannidis et al., 1990; Lecomte et al., 1989; Su et al., 1999; Yap & Jensen, 1992; Zhao et al., 2001).
In the earlier study on the complex of copper(I) ion with both phosphine and a heterocyclic mercaptan, Li et al. have found that the heterocyclic thione ligands exist in the thione form in the adduct, the ligands coordinate in a monodentate fashion through the doubly bonded S atom (Li et al., 2004). In this work, the deprotonated ligand coordinates to the copper(I) ion in a chelate manner through an endocyclic N atom and the exocyclic S atom, giving the title complex (Fig. 1). The Cu atom exists in a tetrahedral environment.
A two-dimensional supramolecular network (Fig. 2) is formed by the intermolecular C—H···S hydrogen bonds [H···S 2.73 (3), 2.83 (2) Å; C—H···S 158.6 (1), 149.6 (1) °].