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The bond angle at the bridging O atom between the two subunits of the title compound, C15H18NO2, is 114.1 (5)°, which exceeds the values reported for structurally related 1-(alkoxy)pyridin-2(1H)-ones. The pyridone ring and the alkoxy substituent are located on a mirror plane so that the carbonyl O atom is disordered over two positions with occupancies of 50%.
Supporting information
CCDC reference: 298542
Key indicators
- Single-crystal X-ray study
- T = 299 K
- Mean (C-C) = 0.011 Å
- Disorder in main residue
- R factor = 0.082
- wR factor = 0.303
- Data-to-parameter ratio = 11.8
checkCIF/PLATON results
No syntax errors found
Alert level A
RINTA01_ALERT_3_A The value of Rint is greater than 0.20
Rint given 0.233
| Author Response: The structure was solved in P21/c, which clearly showed that
O2 and O2a exhibit an occupancy of 50 %.
In view of the existing mirror plane that was located in the molecule,
the structure was transformed and refined in Pnma.
The CIF-check routine then suggested to split C2, C3, and C4.
This has been done, however leading to disturbing
C-C bond lengths for the heterocyclic subunit ranging between
1.1 \%A to 1.9 \%A. The origin of this problem seems in our eyes
to be associated with the quality of the selcted crystal. The
compound was prepared in a project that ended several years ago
and unfortunately is no longer available in our laboratories. In order
to
present the first solid state geometry of a tertiary cylic hydroxamic
acid
O-ester, we therefore chose the present data. The structural discussion
has been supplementented with valuable in formation from reference
compounds and also with spectroscopic data obtained for the title
compound
in solution. In view of these cumulative facts we would be pleased
to present the structure in Acta E.
|
PLAT020_ALERT_3_A The value of Rint is greater than 0.10 ......... 0.23
| Author Response: See answer to question vrf_RINTA01_har33.
|
Alert level B
PLAT026_ALERT_3_B Ratio Observed / Unique Reflections too Low .... 31 Perc.
PLAT213_ALERT_2_B Atom C4 has ADP max/min Ratio ............. 4.20 prolat
PLAT220_ALERT_2_B Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.83 Ratio
PLAT340_ALERT_3_B Low Bond Precision on C-C bonds (x 1000) Ang ... 11
PLAT410_ALERT_2_B Short Intra H...H Contact H6A .. H9 .. 1.87 Ang.
PLAT731_ALERT_1_B Bond Calc 0.97(7), Rep 0.972(10) ...... 7.00 su-Rat
C10 -H10B 1.555 1.555
Alert level C
RFACR01_ALERT_3_C The value of the weighted R factor is > 0.25
Weighted R factor given 0.303
PLAT063_ALERT_3_C Crystal Probably too Large for Beam Size ....... 0.70 mm
PLAT084_ALERT_2_C High R2 Value .................................. 0.30
PLAT213_ALERT_2_C Atom C3 has ADP max/min Ratio ............. 3.30 prolat
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C5
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 3.84
PLAT301_ALERT_3_C Main Residue Disorder ......................... 5.00 Perc.
PLAT309_ALERT_2_C Single Bonded Oxygen (C-O .GT. 1.3 Ang) ........ O2
PLAT320_ALERT_2_C Check Hybridisation of C9 in Main Residue . ?
PLAT432_ALERT_2_C Short Inter X...Y Contact O2 .. C2 .. 2.95 Ang.
PLAT731_ALERT_1_C Bond Calc 0.98(3), Rep 0.986(10) ...... 3.00 su-Rat
C9 -H9 1.555 1.555
PLAT731_ALERT_1_C Bond Calc 0.97(4), Rep 0.971(10) ...... 4.00 su-Rat
C10 -H10A 1.555 1.555
PLAT764_ALERT_4_C Overcomplete CIF Bond List Detected (Rep/Expd) . 1.33 Ratio
2 ALERT level A = In general: serious problem
6 ALERT level B = Potentially serious problem
13 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
10 ALERT type 2 Indicator that the structure model may be wrong or deficient
7 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: CAD-4 Diffractometer Control Software (Enraf–Nonius, 1993); cell refinement: CAD-4 Diffractometer Control Software; data reduction: CAD-4 Diffractometer Control Software; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997) and PLATON2002 (Spek, 2003); software used to prepare material for publication: SHELXL97.
1-(Adamant-1-yloxy)pyridin-2(1
H)-one
top
Crystal data top
C15H18NO2 | F(000) = 524 |
Mr = 244.30 | Dx = 1.296 Mg m−3 |
Orthorhombic, Pnma | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2n | Cell parameters from 25 reflections |
a = 16.982 (3) Å | θ = 3.0–11.1° |
b = 6.559 (3) Å | µ = 0.09 mm−1 |
c = 11.237 (2) Å | T = 299 K |
V = 1251.6 (7) Å3 | Needle, colourless |
Z = 4 | 0.70 × 0.10 × 0.03 mm |
Data collection top
Enraf–Nonius CAD-4 diffractometer | Rint = 0.233 |
Radiation source: fine-focus sealed tube | θmax = 25.5°, θmin = 4.3° |
Graphite monochromator | h = 0→20 |
ω/2θ scans | k = −7→5 |
2132 measured reflections | l = 0→13 |
1256 independent reflections | 3 standard reflections every 120 min |
385 reflections with I > 2σ(I) | intensity decay: 1.2% |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.082 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.303 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.1203P)2 + 0.3693P] where P = (Fo2 + 2Fc2)/3 |
1256 reflections | (Δ/σ)max = 0.017 |
106 parameters | Δρmax = 0.20 e Å−3 |
3 restraints | Δρmin = −0.19 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
C2 | 0.2127 (4) | 0.563 (2) | 0.4245 (7) | 0.118 (4) | |
C3 | 0.2514 (4) | 0.566 (2) | 0.5379 (7) | 0.155 (6) | |
H3 | 0.2641 | 0.4448 | 0.5764 | 0.186* | |
C4 | 0.2696 (8) | 0.7500 | 0.5888 (12) | 0.205 (16) | |
H4 | 0.2956 | 0.7500 | 0.6617 | 0.247* | |
C5 | 0.0736 (4) | 0.7500 | 0.2668 (6) | 0.054 (3) | |
C6 | 0.0397 (4) | 0.9317 (13) | 0.3229 (6) | 0.079 (2) | |
H6A | 0.0625 | 1.0529 | 0.2874 | 0.094* | |
H6B | 0.0526 | 0.9321 | 0.4070 | 0.094* | |
C7 | −0.0502 (4) | 0.9372 (14) | 0.3077 (6) | 0.086 (2) | |
H7 | −0.0718 | 1.0593 | 0.3459 | 0.104* | |
C8 | −0.0830 (6) | 0.7500 | 0.3652 (9) | 0.090 (4) | |
H8A | −0.1399 | 0.7500 | 0.3579 | 0.108* | |
H8B | −0.0699 | 0.7500 | 0.4492 | 0.108* | |
C9 | 0.0567 (6) | 0.7500 | 0.1322 (8) | 0.080 (3) | |
H9 | 0.065 (4) | 0.896 (3) | 0.148 (6) | 0.096* | |
C10 | −0.0674 (5) | 0.558 (2) | 0.1742 (7) | 0.115 (3) | |
H10A | −0.1227 (16) | 0.594 (13) | 0.168 (7) | 0.138* | |
H10B | −0.043 (5) | 0.446 (9) | 0.131 (7) | 0.138* | |
C11 | −0.0351 (6) | 0.7500 | 0.1170 (9) | 0.088 (4) | |
H11 | −0.0482 | 0.7500 | 0.0321 | 0.106* | |
N1 | 0.1932 (4) | 0.7500 | 0.3800 (7) | 0.082 (3) | |
O1 | 0.1600 (3) | 0.7500 | 0.2671 (4) | 0.076 (2) | |
O2 | 0.1959 (5) | 0.3690 (17) | 0.3545 (9) | 0.085 (3) | 0.50 |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C2 | 0.037 (3) | 0.239 (13) | 0.077 (6) | 0.000 (6) | 0.006 (3) | 0.058 (8) |
C3 | 0.048 (5) | 0.353 (18) | 0.065 (6) | −0.008 (8) | −0.015 (4) | 0.075 (9) |
C4 | 0.036 (7) | 0.54 (5) | 0.044 (8) | 0.000 | −0.009 (5) | 0.000 |
C5 | 0.033 (4) | 0.094 (8) | 0.036 (4) | 0.000 | 0.000 (3) | 0.000 |
C6 | 0.058 (4) | 0.108 (6) | 0.070 (4) | 0.007 (4) | 0.001 (3) | −0.001 (5) |
C7 | 0.070 (4) | 0.116 (7) | 0.073 (4) | 0.029 (5) | 0.004 (4) | 0.006 (5) |
C8 | 0.053 (6) | 0.145 (12) | 0.072 (7) | 0.000 | 0.006 (5) | 0.000 |
C9 | 0.073 (6) | 0.126 (10) | 0.040 (5) | 0.000 | −0.010 (5) | 0.000 |
C10 | 0.070 (5) | 0.189 (11) | 0.085 (6) | −0.027 (7) | −0.016 (4) | −0.029 (6) |
C11 | 0.060 (6) | 0.157 (14) | 0.047 (5) | 0.000 | −0.009 (5) | 0.000 |
N1 | 0.040 (4) | 0.171 (11) | 0.036 (4) | 0.000 | 0.004 (4) | 0.000 |
O1 | 0.035 (3) | 0.163 (7) | 0.031 (3) | 0.000 | 0.000 (2) | 0.000 |
O2 | 0.067 (6) | 0.103 (8) | 0.085 (6) | 0.009 (5) | −0.012 (5) | 0.019 (6) |
Geometric parameters (Å, º) top
C2—N1 | 1.368 (12) | C7—H7 | 0.9800 |
C2—C3 | 1.433 (11) | C8—C7i | 1.495 (8) |
C2—O2 | 1.521 (13) | C8—H8A | 0.9700 |
C3—C4 | 1.371 (13) | C8—H8B | 0.9700 |
C3—H3 | 0.9300 | C9—C11 | 1.568 (14) |
C4—C3i | 1.371 (13) | C9—H9 | 0.986 (10) |
C4—H4 | 0.9300 | C10—C11 | 1.515 (12) |
C5—C6 | 1.466 (8) | C10—C7i | 1.529 (10) |
C5—C6i | 1.466 (8) | C10—H10A | 0.971 (10) |
C5—O1 | 1.468 (9) | C10—H10B | 0.972 (10) |
C5—C9 | 1.540 (11) | C11—C10i | 1.515 (12) |
C6—C7 | 1.537 (9) | C11—H11 | 0.9800 |
C6—H6A | 0.9700 | N1—C2i | 1.368 (12) |
C6—H6B | 0.9700 | N1—O1 | 1.387 (9) |
C7—C8 | 1.495 (8) | O2—O2ii | 1.56 (2) |
C7—C10i | 1.529 (10) | | |
| | | |
N1—C2—C3 | 115.0 (13) | C7—C8—C7i | 110.4 (9) |
N1—C2—O2 | 121.0 (6) | C7—C8—H8A | 109.6 |
C3—C2—O2 | 124.0 (12) | C7i—C8—H8A | 109.6 |
C4—C3—C2 | 119.2 (13) | C7—C8—H8B | 109.6 |
C4—C3—H3 | 120.4 | C7i—C8—H8B | 109.6 |
C2—C3—H3 | 120.4 | H8A—C8—H8B | 108.1 |
C3—C4—C3i | 123.4 (12) | C5—C9—C11 | 107.0 (8) |
C3—C4—H4 | 118.3 | C5—C9—H9 | 78 (4) |
C3i—C4—H4 | 118.3 | C11—C9—H9 | 99 (5) |
C6—C5—C6i | 108.8 (8) | C11—C10—C7i | 109.3 (9) |
C6—C5—O1 | 113.0 (4) | C11—C10—H10A | 97 (6) |
C6i—C5—O1 | 113.0 (4) | C7i—C10—H10A | 105 (5) |
C6—C5—C9 | 110.4 (5) | C11—C10—H10B | 105 (6) |
C6i—C5—C9 | 110.4 (5) | C7i—C10—H10B | 115 (6) |
O1—C5—C9 | 100.9 (6) | H10A—C10—H10B | 123 (8) |
C5—C6—C7 | 111.2 (7) | C10—C11—C10i | 112.2 (10) |
C5—C6—H6A | 109.4 | C10—C11—C9 | 108.3 (6) |
C7—C6—H6A | 109.4 | C10i—C11—C9 | 108.3 (6) |
C5—C6—H6B | 109.4 | C10—C11—H11 | 109.3 |
C7—C6—H6B | 109.4 | C10i—C11—H11 | 109.3 |
H6A—C6—H6B | 108.0 | C9—C11—H11 | 109.3 |
C8—C7—C10i | 111.6 (9) | C2i—N1—C2 | 127.9 (12) |
C8—C7—C6 | 107.6 (7) | C2i—N1—O1 | 115.7 (6) |
C10i—C7—C6 | 107.4 (6) | C2—N1—O1 | 115.7 (6) |
C8—C7—H7 | 110.0 | N1—O1—C5 | 114.1 (5) |
C10i—C7—H7 | 110.0 | C2—O2—O2ii | 146.6 (5) |
C6—C7—H7 | 110.0 | | |
Symmetry codes: (i) x, −y+3/2, z; (ii) x, −y+1/2, z. |
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