Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536805041838/sg6048sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536805041838/sg6048Isup2.hkl |
CCDC reference: 296650
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.005 Å
- R factor = 0.034
- wR factor = 0.083
- Data-to-parameter ratio = 17.8
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.97 PLAT125_ALERT_4_C No _symmetry_space_group_name_Hall Given ....... ? PLAT128_ALERT_4_C Non-standard setting of Space group Cmc21 .... A21am PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ? PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Co1 - O1 .. 7.20 su PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Co1 - N1 .. 5.10 su PLAT850_ALERT_2_C Check Flack Parameter Exact Value 0.00 and su .. 0.02
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 28.31 From the CIF: _reflns_number_total 2014 Count of symmetry unique reflns 1155 Completeness (_total/calc) 174.37% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 859 Fraction of Friedel pairs measured 0.744 Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 7 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion
All the chemicals were of AR grade. 3-Methyl-2-hydroxybenzaldehyde (135.1 mg, 1.0 mmol), propane-1,3-diamine (36.9 mg, 0.5 mmol) and Co(CH3COO)2·4H2O (125.1 mg, 0.5 mmol) were refluxed in methanol (50 ml) for 30 min. The mixture was cooled to room temperature and filtered. After keeping the filtrate in air for 5 d, brown block-shaped crystals suitable for X-ray analysis were obtained.
H atoms were positioned geometrically and refined as riding atoms, with C—H distances of 0.93–0.97 Å and Uiso(H) = 1.2 or 1.5Ueq(C).
Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Bruker, 2000); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Fig. 1. The molecular structure of (I), with anisotropic displacement ellipsoids drawn at the 30% probability level. | |
Fig. 2. The molecular packing of (I). |
[Co(C19H20N2O2)] | Dx = 1.446 Mg m−3 |
Mr = 367.30 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, A21am | Cell parameters from 3132 reflections |
a = 7.529 (1) Å | θ = 2.7–24.5° |
b = 10.398 (2) Å | µ = 1.03 mm−1 |
c = 21.553 (3) Å | T = 298 K |
V = 1687.3 (4) Å3 | Flake, red |
Z = 4 | 0.37 × 0.31 × 0.18 mm |
F(000) = 764 |
Bruker SMART APEX CCD area-detector diffractometer | 2014 independent reflections |
Radiation source: fine-focus sealed tube | 1858 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.036 |
ϕ and ω scans | θmax = 28.3°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −9→9 |
Tmin = 0.702, Tmax = 0.836 | k = −13→13 |
9543 measured reflections | l = −27→27 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.034 | H-atom parameters constrained |
wR(F2) = 0.083 | w = 1/[σ2(Fo2) + (0.0344P)2 + 0.5503P] where P = (Fo2 + 2Fc2)/3 |
S = 1.07 | (Δ/σ)max = 0.001 |
2014 reflections | Δρmax = 0.27 e Å−3 |
113 parameters | Δρmin = −0.28 e Å−3 |
1 restraint | Absolute structure: Flack (1983) |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.00 (2) |
[Co(C19H20N2O2)] | V = 1687.3 (4) Å3 |
Mr = 367.30 | Z = 4 |
Orthorhombic, A21am | Mo Kα radiation |
a = 7.529 (1) Å | µ = 1.03 mm−1 |
b = 10.398 (2) Å | T = 298 K |
c = 21.553 (3) Å | 0.37 × 0.31 × 0.18 mm |
Bruker SMART APEX CCD area-detector diffractometer | 2014 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 1858 reflections with I > 2σ(I) |
Tmin = 0.702, Tmax = 0.836 | Rint = 0.036 |
9543 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | H-atom parameters constrained |
wR(F2) = 0.083 | Δρmax = 0.27 e Å−3 |
S = 1.07 | Δρmin = −0.28 e Å−3 |
2014 reflections | Absolute structure: Flack (1983) |
113 parameters | Absolute structure parameter: 0.00 (2) |
1 restraint |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Co1 | 0.47925 (5) | 0.95280 (3) | 1.0000 | 0.04172 (13) | |
O1 | 0.5165 (2) | 0.82171 (16) | 0.94371 (9) | 0.0546 (5) | |
N1 | 0.4326 (3) | 1.0706 (2) | 0.93542 (13) | 0.0560 (7) | |
C1 | 0.4312 (3) | 0.8056 (3) | 0.89170 (13) | 0.0497 (6) | |
C2 | 0.4226 (4) | 0.6808 (3) | 0.86533 (14) | 0.0607 (7) | |
C3 | 0.3269 (5) | 0.6628 (4) | 0.81191 (15) | 0.0760 (10) | |
H3 | 0.3213 | 0.5807 | 0.7949 | 0.091* | |
C4 | 0.2376 (6) | 0.7626 (4) | 0.78207 (16) | 0.0839 (11) | |
H4 | 0.1696 | 0.7468 | 0.7469 | 0.101* | |
C5 | 0.2519 (5) | 0.8838 (4) | 0.80549 (15) | 0.0743 (10) | |
H5 | 0.1985 | 0.9517 | 0.7846 | 0.089* | |
C6 | 0.3454 (4) | 0.9084 (3) | 0.86036 (14) | 0.0550 (7) | |
C7 | 0.5126 (6) | 0.5720 (3) | 0.89908 (19) | 0.0821 (13) | |
H7A | 0.4781 | 0.4916 | 0.8808 | 0.123* | |
H7B | 0.4779 | 0.5732 | 0.9419 | 0.123* | |
H7C | 0.6391 | 0.5819 | 0.8961 | 0.123* | |
C8 | 0.3666 (4) | 1.0356 (3) | 0.88272 (16) | 0.0591 (8) | |
H8 | 0.3289 | 1.1013 | 0.8565 | 0.071* | |
C9 | 0.4602 (6) | 1.2108 (3) | 0.94263 (17) | 0.0774 (10) | |
H9A | 0.3453 | 1.2531 | 0.9426 | 0.093* | |
H9B | 0.5261 | 1.2423 | 0.9071 | 0.093* | |
C10 | 0.5569 (6) | 1.2475 (4) | 1.0000 | 0.0773 (15) | |
H10A | 0.6724 | 1.2061 | 1.0000 | 0.093* | |
H10B | 0.5759 | 1.3397 | 1.0000 | 0.093* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.0329 (2) | 0.02682 (18) | 0.0654 (3) | 0.0022 (2) | 0.000 | 0.000 |
O1 | 0.0471 (14) | 0.0432 (9) | 0.0735 (12) | 0.0077 (8) | −0.0060 (9) | −0.0042 (8) |
N1 | 0.0501 (18) | 0.0327 (10) | 0.0850 (16) | 0.0028 (8) | 0.0094 (11) | 0.0089 (10) |
C1 | 0.0415 (15) | 0.0502 (14) | 0.0573 (15) | −0.0021 (10) | 0.0093 (10) | 0.0041 (12) |
C2 | 0.0596 (17) | 0.0563 (16) | 0.0662 (17) | −0.0037 (12) | 0.0107 (13) | −0.0069 (13) |
C3 | 0.085 (3) | 0.082 (2) | 0.0614 (18) | −0.0108 (18) | 0.0044 (17) | −0.0163 (16) |
C4 | 0.091 (3) | 0.106 (3) | 0.0544 (18) | −0.006 (2) | −0.0026 (17) | −0.009 (2) |
C5 | 0.073 (2) | 0.096 (3) | 0.0540 (18) | 0.009 (2) | 0.0057 (15) | 0.0174 (18) |
C6 | 0.0515 (15) | 0.0566 (16) | 0.0570 (15) | −0.0006 (13) | 0.0120 (12) | 0.0111 (13) |
C7 | 0.088 (4) | 0.0446 (15) | 0.114 (3) | 0.0051 (17) | −0.015 (2) | −0.0191 (15) |
C8 | 0.0543 (18) | 0.0496 (16) | 0.0732 (19) | 0.0054 (12) | 0.0103 (15) | 0.0199 (14) |
C9 | 0.073 (2) | 0.0362 (13) | 0.123 (3) | 0.0027 (18) | 0.001 (2) | 0.0109 (14) |
C10 | 0.046 (2) | 0.046 (2) | 0.139 (5) | 0.0014 (18) | 0.000 | 0.000 |
Co1—O1i | 1.846 (2) | C4—H4 | 0.9300 |
Co1—O1 | 1.846 (2) | C5—C6 | 1.399 (5) |
Co1—N1i | 1.887 (2) | C5—H5 | 0.9300 |
Co1—N1 | 1.887 (2) | C6—C8 | 1.417 (4) |
O1—C1 | 1.303 (3) | C7—H7A | 0.9600 |
N1—C8 | 1.292 (4) | C7—H7B | 0.9600 |
N1—C9 | 1.481 (3) | C7—H7C | 0.9600 |
C1—C2 | 1.419 (4) | C8—H8 | 0.9300 |
C1—C6 | 1.420 (4) | C9—C10 | 1.485 (5) |
C2—C3 | 1.371 (5) | C9—H9A | 0.9700 |
C2—C7 | 1.506 (5) | C9—H9B | 0.9700 |
C3—C4 | 1.394 (6) | C10—C9i | 1.485 (5) |
C3—H3 | 0.9300 | C10—H10A | 0.9700 |
C4—C5 | 1.362 (5) | C10—H10B | 0.9700 |
O1i—Co1—O1 | 82.16 (12) | C5—C6—C8 | 121.0 (3) |
O1i—Co1—N1i | 91.31 (9) | C5—C6—C1 | 119.6 (3) |
O1—Co1—N1i | 172.84 (10) | C8—C6—C1 | 119.3 (3) |
O1i—Co1—N1 | 172.84 (10) | C2—C7—H7A | 109.5 |
O1—Co1—N1 | 91.31 (9) | C2—C7—H7B | 109.5 |
N1i—Co1—N1 | 95.05 (15) | H7A—C7—H7B | 109.5 |
C1—O1—Co1 | 125.83 (17) | C2—C7—H7C | 109.5 |
C8—N1—C9 | 115.0 (3) | H7A—C7—H7C | 109.5 |
C8—N1—Co1 | 122.50 (19) | H7B—C7—H7C | 109.5 |
C9—N1—Co1 | 122.4 (2) | N1—C8—C6 | 127.3 (3) |
O1—C1—C2 | 119.0 (2) | N1—C8—H8 | 116.4 |
O1—C1—C6 | 122.5 (3) | C6—C8—H8 | 116.4 |
C2—C1—C6 | 118.5 (3) | N1—C9—C10 | 114.1 (3) |
C3—C2—C1 | 119.0 (3) | N1—C9—H9A | 108.7 |
C3—C2—C7 | 122.7 (3) | C10—C9—H9A | 108.7 |
C1—C2—C7 | 118.2 (3) | N1—C9—H9B | 108.7 |
C2—C3—C4 | 122.6 (3) | C10—C9—H9B | 108.7 |
C2—C3—H3 | 118.7 | H9A—C9—H9B | 107.6 |
C4—C3—H3 | 118.7 | C9i—C10—C9 | 112.8 (4) |
C5—C4—C3 | 118.7 (4) | C9i—C10—H10A | 109.0 |
C5—C4—H4 | 120.7 | C9—C10—H10A | 109.0 |
C3—C4—H4 | 120.7 | C9i—C10—H10B | 109.0 |
C4—C5—C6 | 121.5 (3) | C9—C10—H10B | 109.0 |
C4—C5—H5 | 119.3 | H10A—C10—H10B | 107.8 |
C6—C5—H5 | 119.3 |
Symmetry code: (i) x, y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Co(C19H20N2O2)] |
Mr | 367.30 |
Crystal system, space group | Orthorhombic, A21am |
Temperature (K) | 298 |
a, b, c (Å) | 7.529 (1), 10.398 (2), 21.553 (3) |
V (Å3) | 1687.3 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.03 |
Crystal size (mm) | 0.37 × 0.31 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.702, 0.836 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9543, 2014, 1858 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.083, 1.07 |
No. of reflections | 2014 |
No. of parameters | 113 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.27, −0.28 |
Absolute structure | Flack (1983) |
Absolute structure parameter | 0.00 (2) |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SAINT, SHELXTL (Bruker, 2000), SHELXTL.
Co1—O1i | 1.846 (2) | Co1—N1i | 1.887 (2) |
Co1—O1 | 1.846 (2) | Co1—N1 | 1.887 (2) |
O1i—Co1—O1 | 82.16 (12) | O1i—Co1—N1 | 172.84 (10) |
O1i—Co1—N1i | 91.31 (9) | O1—Co1—N1 | 91.31 (9) |
O1—Co1—N1i | 172.84 (10) | N1i—Co1—N1 | 95.05 (15) |
Symmetry code: (i) x, y, −z+2. |
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Cobalt compounds have been of great interest in coordination chemistry (Billson et al., 2000; Kotera et al., 2003; Fritsky et al., 2003). A new cobalt(II) compound, (I), derived from the tetradentate chelating Schiff base ligand, is described here.
The crystal structure of (I), possesses mirror plane symmetry, is shown in Fig. 1. The coordination sites are occupied by the four donor atoms of the Schiff base ligand, giving a slightly distorted square-planar geometry. All the bond lengths (Table 1) around the metal center are comparable to those in similar compounds (Cador et al., 2003; Kennedy et al., 1984). The crystal packing of (I) is shown in Fig. 2.