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The (+)-enantiomer of 2-[2-(biphenyl-2-yl)-1-methylethyl]-4,5-dihydro-1H-imidazole is known to produce interesting hypotensive effects via inhibition of I1-imidazoline receptors. The crystal structure of its hydrogen oxalate salt, C18H21N2+·C2HO4-, has now been determined at 170 K, allowing the assignment of the absolute configuration of the parent molecule. The solid-state structure is stabilized by a network of hydrogen bonds between the ions.
Supporting information
CCDC reference: 282582
Key indicators
- Single-crystal X-ray study
- T = 173 K
- Mean (C-C) = 0.003 Å
- R factor = 0.035
- wR factor = 0.083
- Data-to-parameter ratio = 9.1
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT027_ALERT_3_A _diffrn_reflns_theta_full (too) Low ............ 60.54 Deg.
| Author Response: 'see _publ_section_exptl_refinement'
|
Alert level B
THETM01_ALERT_3_B The value of sine(theta_max)/wavelength is less than 0.575
Calculated sin(theta_max)/wavelength = 0.5647
PLAT023_ALERT_3_B Resolution (too) Low [sin(th)/Lambda < 0.6]..... 60.54 Deg.
Alert level C
PLAT063_ALERT_3_C Crystal Probably too Large for Beam Size ....... 0.70 mm
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.48
PLAT350_ALERT_3_C Short C-H Bond (0.96A) C18 - H182 ... 0.84 Ang.
PLAT355_ALERT_3_C Long O-H Bond (0.82A) O1 - H1O ... 1.01 Ang.
PLAT369_ALERT_2_C Long C(sp2)-C(sp2) Bond C19 - C20 ... 1.53 Ang.
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 1
C18 H21 N2
Alert level G
REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is
correct. If it is not, please give the correct count in the
_publ_section_exptl_refinement section of the submitted CIF.
From the CIF: _diffrn_reflns_theta_max 60.54
From the CIF: _reflns_number_total 2761
Count of symmetry unique reflns 1497
Completeness (_total/calc) 184.44%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 1264
Fraction of Friedel pairs measured 0.844
Are heavy atom types Z>Si present no
1 ALERT level A = In general: serious problem
2 ALERT level B = Potentially serious problem
6 ALERT level C = Check and explain
1 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
6 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: CrysAlis CCD (Oxford Diffraction, 2001); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2001); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: Please provide missing details.
(
S)-(+)-2-(2-biphenyl-2-yl-1-methylethyl)-4,5-dihydro-1
H-imidazolium hydrogen oxalate
top
Crystal data top
C18H21N2+·C2HO4− | F(000) = 376 |
Mr = 354.40 | Dx = 1.262 Mg m−3 |
Monoclinic, P21 | Cu Kα radiation, λ = 1.54180 Å |
Hall symbol: P 2yb | Cell parameters from 4415 reflections |
a = 9.4761 (6) Å | θ = 6.0–40.0° |
b = 10.0886 (6) Å | µ = 0.72 mm−1 |
c = 10.5018 (6) Å | T = 173 K |
β = 111.697 (6)° | Elongated plate, colourless |
V = 932.85 (10) Å3 | 0.70 × 0.35 × 0.10 mm |
Z = 2 | |
Data collection top
Oxford Excalibur PX Ultra CCD area-detector diffractometer | 2761 independent reflections |
Radiation source: fine-focus sealed tube | 2497 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.051 |
ω scans | θmax = 60.5°, θmin = 5.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1986) | h = −10→10 |
Tmin = 0.698, Tmax = 0.930 | k = −11→11 |
10735 measured reflections | l = −11→11 |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | Only H-atom coordinates refined |
R[F2 > 2σ(F2)] = 0.035 | w = 1/[σ2(Fo2) + (0.0587P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.083 | (Δ/σ)max < 0.001 |
S = 0.99 | Δρmax = 0.14 e Å−3 |
2761 reflections | Δρmin = −0.16 e Å−3 |
302 parameters | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
1 restraint | Extinction coefficient: 0.0163 (18) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack & Bernardinelli (1999), with 1282 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: −0.1 (2) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.4289 (2) | 0.32165 (19) | −0.31022 (19) | 0.0296 (5) | |
C2 | 0.2940 (2) | 0.27528 (19) | −0.41125 (18) | 0.0294 (4) | |
C3 | 0.2787 (2) | 0.2848 (2) | −0.5486 (2) | 0.0367 (5) | |
H3 | 0.185 (3) | 0.248 (2) | −0.616 (2) | 0.044* | |
C4 | 0.3870 (2) | 0.3428 (3) | −0.5875 (2) | 0.0439 (6) | |
H4 | 0.380 (3) | 0.346 (3) | −0.681 (3) | 0.053* | |
C5 | 0.5166 (3) | 0.3929 (3) | −0.4880 (2) | 0.0483 (6) | |
H5 | 0.589 (3) | 0.433 (3) | −0.515 (3) | 0.058* | |
C6 | 0.5377 (2) | 0.3812 (2) | −0.3507 (2) | 0.0408 (5) | |
H6 | 0.634 (3) | 0.414 (3) | −0.281 (3) | 0.049* | |
C7 | 0.1634 (2) | 0.2239 (2) | −0.37895 (18) | 0.0307 (5) | |
C8 | 0.0917 (2) | 0.3030 (3) | −0.3129 (2) | 0.0395 (5) | |
H8 | 0.126 (3) | 0.392 (3) | −0.284 (2) | 0.047* | |
C9 | −0.0372 (2) | 0.2600 (3) | −0.2929 (2) | 0.0506 (6) | |
H9 | −0.084 (3) | 0.310 (3) | −0.243 (3) | 0.061* | |
C10 | −0.0963 (3) | 0.1364 (3) | −0.3379 (3) | 0.0565 (7) | |
H10 | −0.185 (3) | 0.111 (3) | −0.328 (3) | 0.068* | |
C11 | −0.0251 (3) | 0.0553 (3) | −0.4011 (3) | 0.0514 (6) | |
H11 | −0.061 (3) | −0.038 (3) | −0.432 (3) | 0.062* | |
C12 | 0.1032 (2) | 0.0988 (2) | −0.4228 (2) | 0.0403 (5) | |
H12 | 0.156 (3) | 0.043 (3) | −0.467 (3) | 0.048* | |
C13 | 0.4664 (2) | 0.3028 (2) | −0.15730 (19) | 0.0290 (4) | |
H131 | 0.376 (2) | 0.286 (2) | −0.137 (2) | 0.035* | |
H132 | 0.514 (2) | 0.387 (2) | −0.110 (2) | 0.035* | |
C14 | 0.5777 (2) | 0.1869 (2) | −0.1021 (2) | 0.0341 (5) | |
H14 | 0.661 (3) | 0.199 (2) | −0.131 (2) | 0.041* | |
C15 | 0.5033 (3) | 0.0521 (2) | −0.1523 (3) | 0.0505 (6) | |
H151 | 0.587 (3) | −0.019 (3) | −0.113 (3) | 0.076* | |
H152 | 0.468 (3) | 0.053 (3) | −0.256 (3) | 0.076* | |
H153 | 0.410 (4) | 0.040 (3) | −0.120 (3) | 0.076* | |
C16 | 0.64205 (19) | 0.19010 (19) | 0.05072 (18) | 0.0281 (4) | |
N1 | 0.56109 (19) | 0.1842 (2) | 0.12779 (17) | 0.0384 (5) | |
H1N | 0.460 (3) | 0.189 (2) | 0.099 (2) | 0.046* | |
C17 | 0.6587 (2) | 0.1922 (3) | 0.2730 (2) | 0.0399 (5) | |
H171 | 0.625 (3) | 0.262 (3) | 0.317 (2) | 0.048* | |
H172 | 0.655 (3) | 0.114 (3) | 0.318 (3) | 0.048* | |
C18 | 0.8142 (2) | 0.2119 (3) | 0.2674 (2) | 0.0417 (5) | |
H181 | 0.882 (3) | 0.146 (3) | 0.323 (3) | 0.050* | |
H182 | 0.850 (3) | 0.287 (3) | 0.294 (3) | 0.050* | |
N2 | 0.78654 (17) | 0.19901 (19) | 0.12295 (17) | 0.0355 (4) | |
H2N | 0.849 (3) | 0.213 (2) | 0.088 (2) | 0.043* | |
O1 | −0.01478 (16) | 0.02614 (14) | −0.00863 (18) | 0.0404 (4) | |
H1O | −0.028 (3) | −0.070 (3) | −0.039 (3) | 0.061* | |
O2 | 0.22838 (17) | 0.00075 (16) | 0.0180 (2) | 0.0591 (5) | |
O3 | 0.03193 (14) | 0.27761 (14) | 0.06033 (15) | 0.0392 (4) | |
O4 | 0.26684 (13) | 0.26723 (14) | 0.06190 (15) | 0.0389 (4) | |
C19 | 0.1235 (2) | 0.0687 (2) | 0.0178 (2) | 0.0316 (5) | |
C20 | 0.14339 (19) | 0.2176 (2) | 0.04961 (18) | 0.0286 (4) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0290 (10) | 0.0337 (10) | 0.0261 (11) | 0.0026 (8) | 0.0103 (8) | 0.0004 (8) |
C2 | 0.0263 (9) | 0.0321 (10) | 0.0268 (10) | 0.0057 (9) | 0.0064 (7) | 0.0019 (9) |
C3 | 0.0301 (10) | 0.0494 (13) | 0.0272 (11) | 0.0058 (10) | 0.0064 (9) | −0.0016 (10) |
C4 | 0.0391 (13) | 0.0666 (15) | 0.0274 (12) | 0.0063 (11) | 0.0141 (10) | 0.0029 (11) |
C5 | 0.0402 (12) | 0.0722 (16) | 0.0394 (14) | −0.0065 (12) | 0.0228 (11) | 0.0061 (12) |
C6 | 0.0331 (11) | 0.0555 (14) | 0.0320 (12) | −0.0051 (10) | 0.0100 (10) | −0.0014 (11) |
C7 | 0.0242 (9) | 0.0391 (11) | 0.0212 (10) | 0.0029 (9) | −0.0006 (8) | 0.0072 (9) |
C8 | 0.0293 (11) | 0.0509 (14) | 0.0352 (13) | 0.0025 (10) | 0.0083 (9) | 0.0022 (10) |
C9 | 0.0314 (11) | 0.0805 (19) | 0.0403 (13) | 0.0019 (13) | 0.0137 (10) | 0.0028 (13) |
C10 | 0.0288 (12) | 0.095 (2) | 0.0392 (15) | −0.0160 (14) | 0.0054 (11) | 0.0146 (14) |
C11 | 0.0392 (13) | 0.0611 (16) | 0.0400 (13) | −0.0177 (12) | −0.0014 (11) | 0.0085 (12) |
C12 | 0.0336 (11) | 0.0458 (13) | 0.0309 (12) | −0.0024 (10) | −0.0006 (9) | 0.0027 (10) |
C13 | 0.0260 (10) | 0.0362 (12) | 0.0235 (10) | 0.0005 (9) | 0.0077 (8) | −0.0008 (9) |
C14 | 0.0250 (10) | 0.0530 (13) | 0.0233 (11) | 0.0079 (9) | 0.0078 (8) | −0.0010 (10) |
C15 | 0.0659 (16) | 0.0413 (13) | 0.0309 (13) | 0.0145 (13) | 0.0023 (12) | −0.0069 (11) |
C16 | 0.0190 (9) | 0.0356 (11) | 0.0279 (11) | 0.0023 (8) | 0.0064 (8) | −0.0007 (9) |
N1 | 0.0184 (8) | 0.0696 (13) | 0.0250 (9) | 0.0026 (8) | 0.0053 (7) | −0.0006 (9) |
C17 | 0.0352 (11) | 0.0564 (15) | 0.0250 (11) | 0.0002 (11) | 0.0074 (9) | −0.0017 (11) |
C18 | 0.0281 (11) | 0.0543 (14) | 0.0332 (12) | −0.0040 (11) | 0.0001 (9) | −0.0009 (12) |
N2 | 0.0185 (8) | 0.0572 (11) | 0.0303 (9) | −0.0009 (8) | 0.0085 (7) | 0.0053 (8) |
O1 | 0.0280 (7) | 0.0320 (8) | 0.0638 (10) | −0.0018 (6) | 0.0199 (7) | −0.0029 (7) |
O2 | 0.0283 (8) | 0.0439 (10) | 0.0982 (14) | 0.0084 (7) | 0.0155 (9) | −0.0096 (9) |
O3 | 0.0277 (7) | 0.0327 (8) | 0.0632 (10) | 0.0012 (6) | 0.0240 (6) | −0.0011 (7) |
O4 | 0.0231 (7) | 0.0443 (9) | 0.0498 (9) | −0.0038 (6) | 0.0141 (6) | −0.0054 (7) |
C19 | 0.0219 (10) | 0.0369 (11) | 0.0329 (11) | 0.0042 (9) | 0.0065 (8) | 0.0059 (9) |
C20 | 0.0192 (9) | 0.0361 (11) | 0.0299 (10) | 0.0011 (8) | 0.0085 (8) | 0.0011 (8) |
Geometric parameters (Å, º) top
C1—C6 | 1.389 (3) | C13—H132 | 1.00 (2) |
C1—C2 | 1.406 (3) | C14—C16 | 1.492 (3) |
C1—C13 | 1.523 (3) | C14—C15 | 1.532 (3) |
C2—C3 | 1.399 (3) | C14—H14 | 0.95 (2) |
C2—C7 | 1.492 (3) | C15—H151 | 1.04 (3) |
C3—C4 | 1.368 (3) | C15—H152 | 1.02 (3) |
C3—H3 | 0.98 (2) | C15—H153 | 1.07 (3) |
C4—C5 | 1.381 (3) | C16—N2 | 1.300 (2) |
C4—H4 | 0.96 (3) | C16—N1 | 1.306 (2) |
C5—C6 | 1.385 (3) | N1—C17 | 1.464 (3) |
C5—H5 | 0.93 (3) | N1—H1N | 0.89 (2) |
C6—H6 | 0.99 (3) | C17—C18 | 1.510 (3) |
C7—C8 | 1.389 (3) | C17—H171 | 0.95 (3) |
C7—C12 | 1.392 (3) | C17—H172 | 0.93 (3) |
C8—C9 | 1.383 (3) | C18—N2 | 1.447 (3) |
C8—H8 | 0.97 (3) | C18—H181 | 0.96 (3) |
C9—C10 | 1.377 (4) | C18—H182 | 0.83 (3) |
C9—H9 | 0.94 (3) | N2—H2N | 0.81 (3) |
C10—C11 | 1.377 (4) | O1—C19 | 1.307 (2) |
C10—H10 | 0.92 (3) | O1—H1O | 1.01 (3) |
C11—C12 | 1.389 (3) | O2—C19 | 1.207 (2) |
C11—H11 | 1.01 (3) | O3—C20 | 1.258 (2) |
C12—H12 | 0.97 (3) | O4—C20 | 1.235 (2) |
C13—C14 | 1.537 (3) | C19—C20 | 1.536 (3) |
C13—H131 | 0.97 (2) | | |
| | | |
C6—C1—C2 | 118.93 (18) | H131—C13—H132 | 107.9 (18) |
C6—C1—C13 | 117.82 (18) | C16—C14—C15 | 110.01 (18) |
C2—C1—C13 | 123.15 (17) | C16—C14—C13 | 109.87 (15) |
C3—C2—C1 | 118.31 (17) | C15—C14—C13 | 112.42 (17) |
C3—C2—C7 | 118.67 (16) | C16—C14—H14 | 106.5 (13) |
C1—C2—C7 | 122.92 (16) | C15—C14—H14 | 109.3 (14) |
C4—C3—C2 | 122.26 (19) | C13—C14—H14 | 108.6 (14) |
C4—C3—H3 | 121.3 (14) | C14—C15—H151 | 107.0 (16) |
C2—C3—H3 | 116.5 (14) | C14—C15—H152 | 106.5 (19) |
C3—C4—C5 | 119.1 (2) | H151—C15—H152 | 110 (2) |
C3—C4—H4 | 122.7 (15) | C14—C15—H153 | 108.7 (18) |
C5—C4—H4 | 118.1 (14) | H151—C15—H153 | 113 (2) |
C4—C5—C6 | 120.1 (2) | H152—C15—H153 | 111 (2) |
C4—C5—H5 | 119.0 (17) | N2—C16—N1 | 112.01 (17) |
C6—C5—H5 | 120.9 (17) | N2—C16—C14 | 123.57 (17) |
C5—C6—C1 | 121.2 (2) | N1—C16—C14 | 124.42 (17) |
C5—C6—H6 | 118.9 (14) | C16—N1—C17 | 110.69 (16) |
C1—C6—H6 | 119.9 (14) | C16—N1—H1N | 126.3 (15) |
C8—C7—C12 | 118.0 (2) | C17—N1—H1N | 122.2 (15) |
C8—C7—C2 | 120.96 (18) | N1—C17—C18 | 102.50 (17) |
C12—C7—C2 | 120.8 (2) | N1—C17—H171 | 110.3 (14) |
C9—C8—C7 | 121.2 (2) | C18—C17—H171 | 115.0 (15) |
C9—C8—H8 | 117.0 (14) | N1—C17—H172 | 110.7 (16) |
C7—C8—H8 | 121.7 (14) | C18—C17—H172 | 110.7 (15) |
C10—C9—C8 | 120.2 (3) | H171—C17—H172 | 108 (2) |
C10—C9—H9 | 117.1 (17) | N2—C18—C17 | 103.18 (16) |
C8—C9—H9 | 122.6 (17) | N2—C18—H181 | 113.2 (15) |
C9—C10—C11 | 119.6 (2) | C17—C18—H181 | 109.2 (14) |
C9—C10—H10 | 119.3 (18) | N2—C18—H182 | 109.1 (18) |
C11—C10—H10 | 121.1 (18) | C17—C18—H182 | 113.0 (18) |
C10—C11—C12 | 120.4 (3) | H181—C18—H182 | 109 (2) |
C10—C11—H11 | 122.9 (15) | C16—N2—C18 | 111.19 (16) |
C12—C11—H11 | 116.7 (15) | C16—N2—H2N | 122.1 (17) |
C11—C12—C7 | 120.6 (2) | C18—N2—H2N | 125.1 (17) |
C11—C12—H12 | 122.1 (15) | C19—O1—H1O | 112.2 (15) |
C7—C12—H12 | 117.3 (15) | O2—C19—O1 | 125.1 (2) |
C1—C13—C14 | 110.63 (15) | O2—C19—C20 | 121.35 (17) |
C1—C13—H131 | 112.0 (12) | O1—C19—C20 | 113.59 (16) |
C14—C13—H131 | 108.8 (13) | O4—C20—O3 | 126.15 (18) |
C1—C13—H132 | 107.8 (12) | O4—C20—C19 | 117.07 (16) |
C14—C13—H132 | 109.6 (12) | O3—C20—C19 | 116.78 (16) |
| | | |
C6—C1—C2—C3 | 3.4 (3) | C8—C7—C12—C11 | 0.2 (3) |
C13—C1—C2—C3 | −172.96 (18) | C2—C7—C12—C11 | −175.32 (18) |
C6—C1—C2—C7 | −172.90 (19) | C6—C1—C13—C14 | −75.8 (2) |
C13—C1—C2—C7 | 10.7 (3) | C2—C1—C13—C14 | 100.6 (2) |
C1—C2—C3—C4 | −3.1 (3) | C1—C13—C14—C16 | 166.34 (16) |
C7—C2—C3—C4 | 173.4 (2) | C1—C13—C14—C15 | −70.8 (2) |
C2—C3—C4—C5 | 0.6 (4) | C15—C14—C16—N2 | 114.5 (2) |
C3—C4—C5—C6 | 1.6 (4) | C13—C14—C16—N2 | −121.3 (2) |
C4—C5—C6—C1 | −1.1 (4) | C15—C14—C16—N1 | −65.5 (3) |
C2—C1—C6—C5 | −1.4 (3) | C13—C14—C16—N1 | 58.8 (3) |
C13—C1—C6—C5 | 175.2 (2) | N2—C16—N1—C17 | 1.2 (3) |
C3—C2—C7—C8 | −117.3 (2) | C14—C16—N1—C17 | −178.92 (19) |
C1—C2—C7—C8 | 59.0 (3) | C16—N1—C17—C18 | 3.1 (3) |
C3—C2—C7—C12 | 58.0 (2) | N1—C17—C18—N2 | −5.6 (3) |
C1—C2—C7—C12 | −125.7 (2) | N1—C16—N2—C18 | −5.2 (3) |
C12—C7—C8—C9 | −0.9 (3) | C14—C16—N2—C18 | 174.8 (2) |
C2—C7—C8—C9 | 174.54 (18) | C17—C18—N2—C16 | 6.8 (3) |
C7—C8—C9—C10 | 0.4 (3) | O2—C19—C20—O4 | 7.0 (3) |
C8—C9—C10—C11 | 0.9 (4) | O1—C19—C20—O4 | −172.90 (18) |
C9—C10—C11—C12 | −1.7 (4) | O2—C19—C20—O3 | −173.18 (19) |
C10—C11—C12—C7 | 1.1 (3) | O1—C19—C20—O3 | 6.9 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···O3i | 1.01 (3) | 1.55 (3) | 2.558 (2) | 171 (3) |
N1—H1N···O4 | 0.89 (2) | 1.90 (3) | 2.744 (2) | 158 (2) |
N2—H2N···O3ii | 0.81 (3) | 1.98 (3) | 2.757 (2) | 162 (2) |
Symmetry codes: (i) −x, y−1/2, −z; (ii) x+1, y, z. |
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