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ISSN: 2056-9890

Crystal structure of (2E)-3-[4-(di­methyl­amino)­phen­yl]-1-(thio­phen-2-yl)prop-2-en-1-one

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aUniversidade Federal do Rio Grande (FURG), Escola de Química e Alimentos, Rio Grande, Brazil, bUniversidade Estadual Paulista (UNESP), Instituto de Química, Araraquara, Brazil, and cUniversidade Federal de Sergipe (UFS), Departamento de Química, São Cristóvão, Brazil
*Correspondence e-mail: leandro_bresolin@yahoo.com.br

Edited by C. Rizzoli, Universita degli Studi di Parma, Italy (Received 19 February 2017; accepted 1 March 2017; online 7 March 2017)

The equimolar reaction between 4-(di­methyl­amino)­benzaldehyde and 2-acetyl­thio­phene in basic ethano­lic solution yields the title compound, C15H15NOS, whose mol­ecular structure matches the asymmetric unit. The mol­ecule is not planar, the dihedral angle between the aromatic and the thio­phene rings being 11.4 (2)°. In the crystal, mol­ecules are linked by C—H⋯O and weak C—H⋯S inter­actions along [100], forming R22(8) rings, and by weak C—H⋯O inter­actions along [010], forming chains with a C(6) graph-set motif. In addition, mol­ecules are connected into centrosymmetric dimers by weak C—H⋯π inter­actions, as indicated by the Hirshfeld surface analysis. The most important contributions for the crystal structure are the H⋯H (46.50%) and H⋯C (23.40%) inter­actions. The crystal packing resembles a herringbone arrangement when viewed along [100]. A mol­ecular docking calculation of the title compound with the neuraminidase enzyme was carried out. The enzyme shows (ASN263)N—H⋯O, (PRO245)C—H⋯Cg(thio­phene ring) and (AGR287)C—H⋯N inter­molecular inter­actions with the title compound. The crystal structure was refined as a two-component twin with a fractional contribution to the minor domain of 0.0181 (8).

1. Chemical context

Chalcone derivatives are compounds with an aromatic conjugated enone as the main fragment and are synthesized by hydroxide-catalysed aldol condensation between an aromatic aldehyde and a ketone. Some of the first preparative methods of the aldol condensation were reported in the second half of the 19th Century (Claisen & Claparède, 1881[Claisen, L. & Claparède, A. (1881). Chem. Ber. 14, 2460-2468.]; Schmidt, 1881[Schmidt, J. G. (1881). Chem. Ber. 14, 1459-1461.]) and the experimental procedure remains the same to the present time. Chalcone compounds can be obtained from a great number of starting materials, resulting in a class of compounds with a wide range of properties and applications, specially in the medicinal chemistry. Several 4-di­alkyl­amino­chalcones have shown anti­proliferative activity on cancer cell lines and one method to monitor the chalcone–protein inter­action, e.g. tubulin proteins, is the chalcone's fluorescence (Zhou et al., 2016[Zhou, B., Jiang, P., Lu, J. & Xing, C. (2016). Arch. Pharm. Chem. Life Sci. 349, 539-552.]). Another example of the pharmacological background for the title compound and its derivatives is the anti-influenza viral activity through the neuraminidase enzymatic inhibition in vitro (Kinger et al., 2012[Kinger, M., Park, Y. D., Park, J. H., Hur, M. G., Jeong, H. J., Park, S. J., Lee, W. S., Kim, S. W. & Yang, S. D. (2012). Arch. Pharm. Res. 35, 633-638.]). Thus, the crystal structure determination of chalcone-based mol­ecules is an intensive research area, in particular for its contributions in medicinal chemistry. As part of our studies in this field, we describe herein the crystal structure, the Hirshfeld surface analysis and the mol­ecular docking evaluation of the title compound.

[Scheme 1]

2. Structural commentary

In the crystal structure of the title compound, a chalcone-thio­phene derivative, the asymmetric unit contains one crystallographically independent mol­ecule (Fig. 1[link]). The mol­ecule is not planar: the r.m.s deviations from the mean plane of the non–H atoms range from −0.158 (3) Å for C3 to 0.1318 (15) Å for S1 and the dihedral angle between the benzene and thio­phene rings amounts to 11.4 (2)°. In addition, the plane through the amino group atoms (C7/C8/N1) is rotated by 9.7 (6)° with respect to the plane of the aromatic ring. Finally, the mol­ecule shows the E configuration about the C9—C10 bond.

[Figure 1]
Figure 1
The mol­ecular structure of the title compound, showing displacement ellipsoids drawn at the 40% probability level.

3. Supra­molecular features

In the crystal, the mol­ecules are connected by very weak C13—H13⋯O1i and C14—H14⋯S1i hydrogen-bonding inter­actions (see Table 1[link] for symmetry codes), forming rings with an R22(8) graph-set motif. The R22(8) rings are the subunits of the periodic arrangement along [100] and one very weak H7⋯H2i contact is also observed [H⋯H = 2.26 Å]. The mol­ecular units are also linked by very weak C15—H15⋯O1ii links into chains along [010] with a C(6) graph-set motif (Fig. 2[link]; Table 1[link]). Additionally, the mol­ecules are connected into centrosymmetric dimers by very weak C—H⋯π inter­actions involving the thio­phene ring (Fig. 3[link]; Table 1[link]). The inter­molecular contacts are slightly longer than the sum of the van der Waals radii for the respective atoms (Bondi, 1964[Bondi, A. (1964). J. Phys. Chem. 68, 441-451.]; Rowland & Taylor, 1996[Rowland, R. S. & Taylor, R. (1996). J. Phys. Chem. 100, 7384-7391.]) and suggest weak inter­actions only.

Table 1
Hydrogen-bond geometry (Å, °)

Cg is the centroid of the S1/C12–C15 thio­phene ring.

D—H⋯A D—H H⋯A DA D—H⋯A
C13—H13⋯O1i 0.95 2.65 3.451 (4) 142
C14—H14⋯S1i 0.95 3.00 3.779 (3) 141
C15—H15⋯O1ii 0.95 2.57 3.291 (4) 133
C8—H8⋯Cgiii 0.98 2.64 3.457 (4) 141
Symmetry codes: (i) x+1, y, z; (ii) [-x-{\script{1\over 2}}, y-{\script{1\over 2}}, -z+{\script{3\over 2}}]; (iii) -x, -y, -z+1.
[Figure 2]
Figure 2
Graphical representation of the weak inter­molecular C—H⋯O, C—H⋯S and H⋯H inter­actions (dashed lines) in the crystal structure of the title compound. [Symmetry codes: (i) x + 1, y, z; (ii) −x − [{1\over 2}], y − [{1\over 2}], −z + [{3\over 2}].]
[Figure 3]
Figure 3
Graphical representation of the weak inter­molecular C—H⋯π inter­actions (dashed lines) in the crystal structure of the title compound, forming a centrosymmetric dimer. [Symmetry code: (iii) −x, −y, −z + 1.]

4. Hirshfeld surface analysis

The Hirshfeld surface analysis (Hirshfeld, 1977[Hirshfeld, H. L. (1977). Theor. Chim. Acta, 44, 129-138.]) of the crystal structure suggests that the contribution of the H⋯H inter­molecular inter­actions to the crystal packing amounts to 46.50% and the contribution of the H⋯C inter­actions amounts to 23.40%. Other important inter­molecular contacts for the cohesion of the structure are (values given in %): H⋯O = 10.80 and H⋯S = 10.00. Graphical representations of the Hirshfeld surface with transparency and labelled atoms (Figs. 4[link] and 5[link]) indicate, in a magenta colour, the locations of the strongest inter­molecular contacts, e.g. the H2, H7, H13, H15 and O1 atoms. The C—H⋯π inter­action is also well represented in the Hirshfeld surface (for details, compare Figs. 3[link] and 5[link]). The H⋯H, H⋯C, H⋯O and H⋯S contributions to the crystal packing are shown as a Hirshfeld surface two-dimensional fingerprint plot with cyan dots. The de (y axis) and di (x axis) values are the closest external and inter­nal distances (values given in Å) from given points on the Hirshfeld surface contacts (Fig. 6[link]; Wolff et al., 2012[Wolff, S. K., Grimwood, D. J., McKinnon, J. J., Turner, M. J., Jayatilaka, D. & Spackman, M. A. (2012). Crystal Explorer. University of Western Australia, Perth, Australia.]).

[Figure 4]
Figure 4
A graphical representation of the Hirshfeld surface (dnorm) for the title compound. The surface is drawn with transparency and all atoms are labelled. The surface regions with strongest inter­molecular inter­actions for atoms H2, H15 and O1 are shown in magenta.
[Figure 5]
Figure 5
A graphical representation of the Hirshfeld surface (dnorm) for the title compound. The surface is drawn with transparency and all atoms are labelled. The surface regions with strongest inter­molecular inter­actions for atoms H7, H8, H13 and O1, and for the thio­phene ring, are shown in magenta.
[Figure 6]
Figure 6
Hirshfeld surface two-dimensional fingerprint plots for the title compound showing the (a) H⋯H, (b) H⋯C, (c) O⋯H and (d) H⋯S contacts in detail (cyan dots). The contributions of the inter­actions to the crystal packing amount to 46.50, 23.40, 10.80 and 10.00%, respectively. The de (y axis) and di (x axis) values are the closest external and inter­nal distances (values in Å) from given points on the Hirshfeld surface contacts.

5. Mol­ecular docking evaluation

In addition, a lock-and-key supra­molecular analysis between the neuraminidase enzyme, whose inhibition is believed to be a key point to block the influenza viral infection (Kinger et al., 2012[Kinger, M., Park, Y. D., Park, J. H., Hur, M. G., Jeong, H. J., Park, S. J., Lee, W. S., Kim, S. W. & Yang, S. D. (2012). Arch. Pharm. Res. 35, 633-638.]), and the title compound was performed. The semi-empirical equilibrium energy of the title compound was obtained using the PM6 Hamiltonian and the experimental bond lengths were conserved. The calculated parameters were: heat of formation = 139.28 kJ mol−1, gradient normal = 0.62031, HOMO = −8.96 eV, LUMO = −0.866 eV and energy gap = 7.421 eV (Stewart, 2013[Stewart, J. J. (2013). J. Mol. Model. 19, 1-32.]). The rigid mol­ecular docking was carried out with the GOLD software (Jones et al., 1997[Jones, G., Willett, P., Glen, R. C., Leach, A. R. & Taylor, R. (1997). J. Mol. Biol. 267, 727-748.]) using the ChemPLP score function (Chen, 2015[Chen, Y.-C. (2015). Trends Pharmacol. Sci. 36, 78-95.]). The chalcone thio­phene derivative and the active site of the neuraminidase match (Fig. 7[link]) and the structure–activity relationship can be assumed by the following observed inter­molecular inter­actions (H⋯A distance values given in Å): (ASN263)N—H⋯O1 (d = 1.796), (PRO245)C—H⋯Cg(thio­phene ring) (d = 2.829) and (AGR287)C—H⋯N1 (d = 2.620) (Fig. 8[link]). More details about the in silico evaluation, with additional references, can be found in the Supporting Information. For the inter­molecular inter­actions, it is important to report that the H⋯Cg(thio­phene ring) contact is observed in the structure inter­pretation, by the centrosymmetric dimeric arrangement of the mol­ecules (Figs. 3[link] and 9[link]), in the Hirshfeld surface analysis (Fig. 5[link]) and in the mol­ecular docking evaluation (Fig. 8[link]).

[Figure 7]
Figure 7
Graphical representation of the lock-and-key model for the title compound, with the mol­ecular main fragment in green, and the neuraminidase structure, with selected amino acids residues, in stick model. The structure of the enzyme is simplified for clarity.
[Figure 8]
Figure 8
Inter­molecular inter­actions between the title compound and the neuraminidase enzyme. The inter­actions are shown as dashed lines and the structure of the enzyme is simplified for clarity.
[Figure 9]
Figure 9
Section of the crystal structures of (a) the title compound viewed along [100], and (b) the 3-(4-methyl­phen­yl)-1-(3-thien­yl)-2-propen-1-one compound (Li & Su, 1993[Li, Z. & Su, G. (1993). Acta Cryst. C49, 1075-1077.]) viewed along [001], showing the herringbone motif.

6. Database survey

Chalcone-thio­phene derivatives have some mol­ecular structural features in common, namely the nearly planar geometry, as a result of the sp2-hybridized C atoms of the main fragment, and the weak inter­molecular inter­actions, e.g. H⋯H, H⋯C or ππ contacts. One example for comparison with the title compound is the crystal structure of the compound 3-(4-methyl­phen­yl)-1-(3-thien­yl)-2-propen-1-one (Li & Su, 1993[Li, Z. & Su, G. (1993). Acta Cryst. C49, 1075-1077.]). In both of the structures, the mol­ecules are linked by weak inter­actions into centrosymmetric dimers and the crystal packing shows a herringbone motif: for the title compound this mol­ecular arrangement is clear when looking along the [100] direction (Fig. 9[link]a) and for the above-mentioned 3-thienyl derivative, along [001] (Fig. 9[link]b).

7. Synthesis and crystallization

All starting materials are commercially available and were used without further purification. The synthesis of the title compound was adapted from a previously reported procedure (Claisen & Claparède, 1881[Claisen, L. & Claparède, A. (1881). Chem. Ber. 14, 2460-2468.]; Schmidt, 1881[Schmidt, J. G. (1881). Chem. Ber. 14, 1459-1461.]; Zhou et al., 2016[Zhou, B., Jiang, P., Lu, J. & Xing, C. (2016). Arch. Pharm. Chem. Life Sci. 349, 539-552.]). In a hydroxide-catalysed reaction, a mixture of 4-(di­methyl­amino)­benzaldehyde (10 mmol) and 2-acetyl­thio­phene (10 mmol) in ethanol (80 mL) was stirred under room temperature for 4 h. After cooling in an ice bath and filtering, an orange solid was obtained. Orange crystals were grown from the solution after 24 h.

8. Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2[link]. H atoms were located in a difference-Fourier map but were positioned with idealized geometry and were refined with isotropic displacement parameters using a riding model (HFIX command) with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(C) for methyl H atoms. A rotating model was used for the methyl groups. The crystal was refined as a two-component twin {twin law: two-axis (001) [105], BASF = 0.0181 (8)}.

Table 2
Experimental details

Crystal data
Chemical formula C15H15NOS
Mr 257.34
Crystal system, space group Monoclinic, P21/n
Temperature (K) 120
a, b, c (Å) 6.2405 (4), 9.9975 (6), 20.7815 (13)
β (°) 93.097 (2)
V3) 1294.65 (14)
Z 4
Radiation type Mo Kα
μ (mm−1) 0.24
Crystal size (mm) 0.53 × 0.16 × 0.09
 
Data collection
Diffractometer Bruker APEXII CCD area detector
Absorption correction Multi-scan (SADABS; Bruker, 2014[Bruker (2014). APEX2, SADABS and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.])
Tmin, Tmax 0.885, 0.979
No. of measured, independent and observed [I > 2σ(I)] reflections 50820, 3381, 3116
Rint 0.031
(sin θ/λ)max−1) 0.677
 
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.068, 0.182, 1.14
No. of reflections 3381
No. of parameters 166
H-atom treatment H-atom parameters constrained
Δρmax, Δρmin (e Å−3) 1.16, −0.81
Computer programs: APEX2 and SAINT (Bruker, 2014[Bruker (2014). APEX2, SADABS and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.]), SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]), SHELXL2016 (Sheldrick, 2015[Sheldrick, G. M. (2015). Acta Cryst. C71, 3-8.]), WinGX (Farrugia, 2012[Farrugia, L. J. (2012). J. Appl. Cryst. 45, 849-854.]), DIAMOND (Brandenburg, 2006[Brandenburg, K. (2006). DIAMOND. Crystal Impact GbR, Bonn, Germany.]), GOLD (Chen et al., 2015[Chen, Y.-C. (2015). Trends Pharmacol. Sci. 36, 78-95.]), Crystal Explorer (Wolff et al., 2012[Wolff, S. K., Grimwood, D. J., McKinnon, J. J., Turner, M. J., Jayatilaka, D. & Spackman, M. A. (2012). Crystal Explorer. University of Western Australia, Perth, Australia.]), publCIF (Westrip, 2010[Westrip, S. P. (2010). J. Appl. Cryst. 43, 920-925.]) and enCIFer (Allen et al., 2004[Allen, F. H., Johnson, O., Shields, G. P., Smith, B. R. & Towler, M. (2004). J. Appl. Cryst. 37, 335-338.]).

Supporting information


Computing details top

Data collection: APEX2 (Bruker, 2014); cell refinement: SAINT (Bruker, 2014); data reduction: SAINT (Bruker, 2014); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2016 (Sheldrick, 2015) and WinGX (Farrugia, 2012); molecular graphics: DIAMOND (Brandenburg, 2006), GOLD (Chen et al., 2015) and Crystal Explorer (Wolff et al., 2012); software used to prepare material for publication: publCIF (Westrip, 2010) and enCIFer (Allen et al., 2004).

(2E)-3-[4-(Dimethylamino)phenyl]-1-(thiophen-2-yl)prop-2-en-1-one top
Crystal data top
C15H15NOSF(000) = 544
Mr = 257.34Dx = 1.320 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 6.2405 (4) ÅCell parameters from 9620 reflections
b = 9.9975 (6) Åθ = 2.3–28.7°
c = 20.7815 (13) ŵ = 0.24 mm1
β = 93.097 (2)°T = 120 K
V = 1294.65 (14) Å3Block, orange
Z = 40.53 × 0.16 × 0.09 mm
Data collection top
Bruker APEXII CCD area detector
diffractometer
3116 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tube, Bruker APEXII CCD area detectorRint = 0.031
φ and ω scansθmax = 28.8°, θmin = 2.3°
Absorption correction: multi-scan
(SADABS; Bruker, 2014)
h = 78
Tmin = 0.885, Tmax = 0.979k = 1313
50820 measured reflectionsl = 2828
3381 independent reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.068Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.182H-atom parameters constrained
S = 1.14 w = 1/[σ2(Fo2) + 7.019P]
where P = (Fo2 + 2Fc2)/3
3381 reflections(Δ/σ)max < 0.001
166 parametersΔρmax = 1.16 e Å3
0 restraintsΔρmin = 0.81 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Refinement. Refined as a 2-component twin.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.1108 (5)0.1473 (3)0.52979 (15)0.0159 (6)
C20.2422 (5)0.1940 (4)0.47768 (16)0.0189 (6)
H10.3825130.1579380.4710360.023*
C30.1753 (5)0.2904 (4)0.43572 (15)0.0193 (6)
H20.2696400.3192010.4010450.023*
C40.0319 (5)0.3467 (3)0.44378 (15)0.0178 (6)
C50.1659 (5)0.2992 (3)0.49602 (16)0.0188 (6)
H30.3063830.3347990.5029390.023*
C60.0956 (5)0.2024 (3)0.53690 (15)0.0181 (6)
H40.1902790.1717340.5711040.022*
C70.3103 (6)0.5007 (4)0.4112 (2)0.0295 (8)
H50.3187860.5531580.4510580.044*
H60.3363780.5592000.3745720.044*
H70.4187470.4297360.4138700.044*
C80.0527 (6)0.5041 (4)0.35627 (17)0.0241 (7)
H80.1173650.4356430.3276240.036*
H90.0219990.5700860.3307280.036*
H100.1652670.5488050.3793840.036*
C90.1918 (5)0.0467 (3)0.57189 (15)0.0168 (6)
H110.3368080.0209030.5629070.020*
C100.0899 (5)0.0158 (3)0.62222 (15)0.0163 (6)
H120.0560530.0047300.6334160.020*
C110.2021 (5)0.1147 (3)0.65969 (15)0.0164 (6)
C120.0788 (5)0.1847 (3)0.71167 (15)0.0155 (6)
C130.1366 (5)0.1816 (3)0.72937 (15)0.0174 (6)
H130.2375330.1267600.7091360.021*
C140.1911 (5)0.2697 (3)0.78141 (16)0.0194 (6)
H140.3330990.2813130.7993800.023*
C150.0180 (5)0.3357 (3)0.80267 (15)0.0180 (6)
H150.0247150.3971590.8375760.022*
N10.0994 (5)0.4417 (3)0.40233 (14)0.0232 (6)
O10.3960 (4)0.1393 (3)0.65025 (12)0.0220 (5)
S10.21315 (13)0.29494 (9)0.75923 (4)0.0187 (2)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0188 (14)0.0149 (14)0.0140 (14)0.0025 (12)0.0012 (11)0.0014 (11)
C20.0160 (14)0.0211 (16)0.0195 (15)0.0028 (12)0.0003 (12)0.0010 (13)
C30.0187 (15)0.0221 (16)0.0167 (14)0.0051 (13)0.0014 (12)0.0004 (13)
C40.0226 (16)0.0152 (14)0.0159 (14)0.0039 (12)0.0030 (12)0.0011 (12)
C50.0200 (15)0.0170 (15)0.0191 (15)0.0006 (12)0.0011 (12)0.0016 (12)
C60.0211 (15)0.0179 (15)0.0148 (14)0.0020 (13)0.0029 (11)0.0011 (12)
C70.0287 (19)0.0276 (19)0.032 (2)0.0026 (16)0.0024 (15)0.0082 (16)
C80.0300 (18)0.0202 (16)0.0220 (16)0.0055 (14)0.0009 (14)0.0054 (13)
C90.0190 (15)0.0161 (14)0.0156 (14)0.0017 (12)0.0027 (11)0.0033 (12)
C100.0172 (14)0.0158 (14)0.0159 (14)0.0027 (12)0.0011 (11)0.0025 (12)
C110.0183 (14)0.0159 (14)0.0150 (14)0.0004 (12)0.0023 (11)0.0018 (11)
C120.0168 (14)0.0146 (14)0.0154 (14)0.0017 (11)0.0030 (11)0.0020 (11)
C130.0165 (14)0.0174 (15)0.0182 (15)0.0029 (12)0.0004 (11)0.0020 (12)
C140.0176 (14)0.0202 (16)0.0203 (15)0.0023 (12)0.0011 (12)0.0047 (13)
C150.0184 (15)0.0199 (15)0.0157 (14)0.0009 (12)0.0001 (11)0.0010 (12)
N10.0267 (15)0.0216 (14)0.0211 (14)0.0009 (12)0.0012 (12)0.0062 (12)
O10.0145 (11)0.0256 (13)0.0258 (12)0.0025 (10)0.0014 (9)0.0034 (10)
S10.0137 (4)0.0218 (4)0.0210 (4)0.0023 (3)0.0030 (3)0.0038 (3)
Geometric parameters (Å, º) top
C1—C61.401 (5)C8—H80.9800
C1—C21.403 (4)C8—H90.9800
C1—C91.442 (4)C8—H100.9800
C2—C31.379 (5)C9—C101.348 (5)
C2—H10.9500C9—H110.9500
C3—C41.412 (5)C10—C111.461 (4)
C3—H20.9500C10—H120.9500
C4—N11.364 (4)C11—O11.240 (4)
C4—C51.416 (5)C11—C121.469 (4)
C5—C61.375 (5)C12—C131.375 (4)
C5—H30.9500C12—S11.728 (3)
C6—H40.9500C13—C141.422 (4)
C7—N11.445 (5)C13—H130.9500
C7—H50.9800C14—C151.359 (4)
C7—H60.9800C14—H140.9500
C7—H70.9800C15—S11.709 (3)
C8—N11.452 (4)C15—H150.9500
C6—C1—C2116.5 (3)H8—C8—H10109.5
C6—C1—C9124.1 (3)H9—C8—H10109.5
C2—C1—C9119.4 (3)C10—C9—C1128.9 (3)
C3—C2—C1122.4 (3)C10—C9—H11115.6
C3—C2—H1118.8C1—C9—H11115.6
C1—C2—H1118.8C9—C10—C11120.5 (3)
C2—C3—C4120.7 (3)C9—C10—H12119.7
C2—C3—H2119.7C11—C10—H12119.7
C4—C3—H2119.7O1—C11—C10122.8 (3)
N1—C4—C3121.0 (3)O1—C11—C12119.3 (3)
N1—C4—C5121.9 (3)C10—C11—C12117.9 (3)
C3—C4—C5117.1 (3)C13—C12—C11130.7 (3)
C6—C5—C4121.0 (3)C13—C12—S1111.0 (2)
C6—C5—H3119.5C11—C12—S1118.3 (2)
C4—C5—H3119.5C12—C13—C14112.3 (3)
C5—C6—C1122.2 (3)C12—C13—H13123.8
C5—C6—H4118.9C14—C13—H13123.8
C1—C6—H4118.9C15—C14—C13112.7 (3)
N1—C7—H5109.5C15—C14—H14123.6
N1—C7—H6109.5C13—C14—H14123.6
H5—C7—H6109.5C14—C15—S1112.1 (3)
N1—C7—H7109.5C14—C15—H15124.0
H5—C7—H7109.5S1—C15—H15124.0
H6—C7—H7109.5C4—N1—C7120.9 (3)
N1—C8—H8109.5C4—N1—C8120.1 (3)
N1—C8—H9109.5C7—N1—C8117.8 (3)
H8—C8—H9109.5C15—S1—C1291.87 (16)
N1—C8—H10109.5
C6—C1—C2—C30.9 (5)O1—C11—C12—C13175.7 (3)
C9—C1—C2—C3179.7 (3)C10—C11—C12—C135.9 (5)
C1—C2—C3—C40.0 (5)O1—C11—C12—S12.0 (4)
C2—C3—C4—N1179.7 (3)C10—C11—C12—S1176.4 (2)
C2—C3—C4—C50.5 (5)C11—C12—C13—C14177.5 (3)
N1—C4—C5—C6179.3 (3)S1—C12—C13—C140.3 (4)
C3—C4—C5—C60.0 (5)C12—C13—C14—C151.0 (4)
C4—C5—C6—C10.9 (5)C13—C14—C15—S11.2 (4)
C2—C1—C6—C51.3 (5)C3—C4—N1—C7179.1 (3)
C9—C1—C6—C5179.3 (3)C5—C4—N1—C71.7 (5)
C6—C1—C9—C102.8 (5)C3—C4—N1—C811.2 (5)
C2—C1—C9—C10176.5 (3)C5—C4—N1—C8169.6 (3)
C1—C9—C10—C11179.2 (3)C14—C15—S1—C120.9 (3)
C9—C10—C11—O14.9 (5)C13—C12—S1—C150.3 (3)
C9—C10—C11—C12176.7 (3)C11—C12—S1—C15178.4 (3)
Hydrogen-bond geometry (Å, º) top
Cg is the centroid of the S1/C12–C15 thiophene ring.
D—H···AD—HH···AD···AD—H···A
C13—H13···O1i0.952.653.451 (4)142
C14—H14···S1i0.953.003.779 (3)141
C15—H15···O1ii0.952.573.291 (4)133
C8—H8···Cgiii0.982.643.457 (4)141
Symmetry codes: (i) x+1, y, z; (ii) x1/2, y1/2, z+3/2; (iii) x, y, z+1.
 

Acknowledgements

ABO is an associate researcher in the project `Di­nitrosyl complexes containing thiol and/or thio­semicarbazone: synthesis, characterization and treatment against cancer', founded by FAPESP, Proc. 2015/12098–0, and acknowledges Professor José C. M. Pereira (UNESP, Brazil) for his support. GPO thanks CNPq for the MSc scholarship and RLF thanks the CAPES foundation for the PhD scholarship. The authors acknowledge Professor Manfredo Hörner for access to experimental facilities and Guilherme Alves de Moraes for the data collection (Federal University of Santa Maria, Brazil).

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