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2-{1-[(Pyrazin-2-ylformamido)­meth­yl]cyclo­hex­yl}acetic acid (Pyr-Gpn-OH), C14H19N3O3, is an N-protected derivative of gabapentin (Gpn). The compound crystallizes in the triclinic space group P\overline{1} and the mol­ecular conformation is stabilized by intra­molecular five- (C5) and seven-membered (C7) hydrogen-bonded rings. The packing of the mol­ecules reveals inter­molecular O-H...O and C-H...N hydrogen bonds, together with [pi]-[pi] inter­actions.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270113021781/qs3028sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S0108270113021781/qs3028Isup2.hkl
Contains datablock I

cml

Chemical Markup Language (CML) file https://doi.org/10.1107/S0108270113021781/qs3028Isup3.cml
Supplementary material

CCDC reference: 900739

Introduction top

The use of gabapentin [(1-amino­methyl)­cyclo­hexane­acetic acid, Gpn] as a γ-amino acid is of great inter­est in the area of peptide design (Ananda et al., 2003; Vasudev et al., 2007; Balaram, 2010). Gabapentin has been used widely as an anti­epileptic drug and has been employed for the treatment of neuropathic pain (Wheeler, 2002; Stefan & Feuerstein, 2007; Rosenberg et al., 1997; Maneuf et al., 2003). It has been extensively investigated for the occurrence of polymorphic crystal forms (Ibers, 2001; Reece & Levendis, 2008). The insertion of additional residues into the α-peptide backbone by the introduction of β-, γ- and higher ω-amino acids leads to greater conformational diversity due to the enhanced conformational space. There are four conformational variables, i.e. φ, θ1, θ2 and ψ for a γ-amino acid (Fig. 1). The presence of substituents at the central Cβ atom of gabapentin limits the range of conformations about the Cγ—Cβ (θ1) and Cβ—Cα (θ2) bonds to the gauche conformation (Ananda et al., 2003; Aravinda, Ananda et al., 2003). In the present study, we have synthesized the N-protected pyrazinoyl derivative of gabapentin, namely 2-{1-[(pyrazin-2-ylformamido)­methyl]­cyclo­hexyl}­acetic acid, Pyr-Gpn-OH, in order to investigate the effect of the pyrazinoyl group on the conformation of gabapentin. The pyrazinoyl group has been introduced as an N-terminal protecting group of borteozomib, a reversible inhibitor of the proteolytic activity of 26S proteasome (Voorhees & Orlowski, 2006; Baker et al., 2009). Previous studies have shown that the amide of pyrazinoic acid, i.e. pyrazinamide, is used as a first-line drug to treat tuberculosis (Snider & Castro, 1998). Under acidic conditions it is thought to be a prodrug of pyrazinoic acid, which is a compound with anti­mycobacterial activity (Cyanamon et al., 1992).

Experimental top

Synthesis and crystallization top

For the synthesis of Pyr-Gpn-OH, pyrazine-2-carb­oxy­lic acid (3 mmol, 372 mg) was dissolved in dry CH2Cl2 [Qu­antity?] and N-methyl­morpholine (200 µl) was added, followed by Gpn-OMe.HCl (3 mmol, 666.5 mg) and EDCI.HCl (Define?; 3 mmol, 576 mg) under ice-cold conditions. The reaction mixture was stirred at room temperature for 12 h. After completion of the reaction, water was added [Qu­antity?] and then the reaction mixture was extracted with CH2Cl2 (3 × 5 ml). The combined organic layer was washed with 2 N HCl (2 × 5 ml), Na2CO3 (2 × 5 ml) and brine (2 × 5 ml). The organic layer was passed over anhydrous Na2SO4 and evaporated to give Pyr-Gpn-OMe (yield 610 mg, 69.8%).

Pyr-Gpn-OMe (2 mmol, 580 mg) was dissolved in methanol (2 ml) and 2 N NaOH (1 ml), and the reaction mixture stirred at room temperature for 4 h. The methanol was evaporated off and the residue extracted with di­ethyl ether (2 × 5 ml). The aqueous layer was acidified with 2N HCl and extracted with ethyl acetate (3 × 5 ml). The combined organic layer was washed with brine solution (1 × 5 ml). The ethyl acetate layer was passed over anhydrous Na2SO4 and evaporated to give Pyr-Gpn-OH (yield 380 mg, 69.0%). [Comment states Pyr-Gpn-OH was crystallized by slow evaporation from a mixture of ethyl acetate–hexane. Therefore, please complete procedure here. Solvent ratio?]

Refinement top

Crystal data, data collection and structure refinement details are summarized in Table 1. H atoms were located in a difference Fourier map and their coordinates restrained to geometric positions; their displacement parameters were restrained to a value 20% greater than the parent atom.

Results and discussion top

The compound Pyr-Gpn-OH was crystallized by slow evaporation from a mixture of ethyl acetate–hexane [Solvent ratio?] in the triclinic space group P1. In most cases, N-protected derivatives of gabapentin crystallize in monoclininic space groups (Ananda et al., 2003). Fig. 2 shows the molecular conformation determined for the crystal structure of Pyr-Gpn-OH. The backbone dihedral angles are φ = 93.3 (2)°, θ1 = 43.5 (2)°, θ2 = 55.9 (2)° and ψ = 116.4 (2)°. Hydrogen-bond parameters are listed in Table 2.

In the crystal structure, five- (C5) and seven-membered (C7) intra­molecular hydrogen bonds are present. The C5 (N—H···N) intra­molecular hydrogen bond is observed between atom N2 of the pyrazine ring and the NH group of gabapentin, while the C7 (N—H···O) hydrogen bond is observed between GpnNH and the carbonyl group of the terminal carb­oxy­lic acid group. The C7 hydrogen bond in gabapentin may be considered as an expansion of C5 hydrogen-bonded structures described in fully extended conformations of α-peptides (Benedetti et al., 1984, 1988; Valle et al., 1986). In addition to the C5 and C7 hydrogen bonds, a weak C—H···O inter­action is also observed between Gpn CγH and Pyr CO groups. These kinds of inter­actions are important determinants of molecular conformation and crystal packing (Desiraju, 1996; Steiner, 1997; Lo Prestil et al., 2006).

The dihedral angles about the Cγ—Cβ (θ1) and Cβ—Cα (θ2) bonds are restricted to the gauche conformation due to the presence of substituents at the Cβ atom, which limits the range of rotation. The cyclo­hexane ring adopts a chair conformation, with axial amino methyl and equatorial carb­oxy­methyl groups, as observed in derivatives of gabapentin, Piv-Gpn-OH and Tos-Gpn-OH (Ananda et al., 2003). In Pyr-Gpn-OH, the N-terminal protecting group favours a trans geometry with ω0 = -175.1 (2)°.

Fig. 3 shows the packing of the molecules of Pyr-Gpn-OH in the crystal structure, down the a axis. The molecules are arranged via O—H···.O and C—H···N (pyrazine N atom) inter­molecular hydrogen bonds, together with ππ inter­actions between the pyrazine rings, which are stacked in a face-to-face (3.76 Å) and edge-to-face (6.04 Å) manner (Fig. 3). ππ inter­actions have been reported to induce self-assembly in peptides (Ma et al., 2010; Wang & Chau, 2011). The distances between the centroids of the pyrazine rings are within the range for stabilizing ππ inter­actions (Burley & Petsko, 1985; Waters, 2002; Aravinda, Shamala et al., 2003; Sengupta et al., 2005). Fig. 4 shows a space-filling model for the structure of Pyr-Gpn-OH, and depicts the layers formed by alternating ππ and hydro­phobic inter­actions.

Conclusions top

The present X-ray analysis of Pyr-Gpn-OH demonstrates the stabilization of the crystal structure by C5, C7 and C—H···O intra­molecular hydrogen bonds. The molecules in the crystal are packed by inter­molecular O—H···O and C—H···N hydrogen bonds, together with ππ inter­actions between pyrazine rings.

Related literature top

For related literature, see: Ananda et al. (2003); Aravinda, Ananda, Shamala & Balaram (2003); Aravinda, Shamala, Das, Sriranjini, Karle & Balaram (2003); Baker et al. (2009); Balaram (2010); Benedetti et al. (1984, 1988); Burley & Petsko (1985); Cyanamon et al. (1992); Desiraju (1996); Ibers (2001); Lo Prestil, Soave & Destro (2006); Ma et al. (2010); Maneuf et al. (2003); Reece & Levendis (2008); Rosenberg et al. (1997); Sengupta et al. (2005); Snider & Castro (1998); Stefan & Feuerstein (2007); Steiner (1997); Valle et al. (1986); Vasudev et al. (2007); Voorhees & Orlowski (2006); Wang & Chau (2011); Waters (2002); Wheeler (2002).

Computing details top

Data collection: CrysAlis PRO (Oxford Diffraction, 2010); cell refinement: CrysAlis PRO (Oxford Diffraction, 2010); data reduction: CrysAlis PRO (Oxford Diffraction, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: PLATON (Spek, 2009).

Figures top
[Figure 1] Fig. 1. The conformation parameters used to define the backbone torsion angles of Pyr-Gpn.
[Figure 2] Fig. 2. The molecular conformation of Pyr-Gpn-OH in the crystal, showing the atom-numbering scheme. Displacement ellipsoids are drawn at the ??% probability level [Please complete]. Intramolecular hydrogen bonds are represented as dotted lines.
[Figure 3] Fig. 3. The molecular packing of Pyr-Gpn-OH, down the a axis, showing ππ (green in the electronic version of the journal), and O—H···O and C—H···N interactions (blue?) as dashed lines. The centroid–centroid distances are shown.
[Figure 4] Fig. 4. Space-filling model for the structure of Pyr-Gpn-OH, showing the layers formed by ππ and hydrophobic interactions. [Plot looks distorted - H atoms are oval. Please check, and revise if necessary]
2-{1-[(Pyrazin-2-ylformamido)methyl]cyclohexyl}acetic acid top
Crystal data top
C14H19N3O3Z = 2
Mr = 277.32F(000) = 296
Triclinic, P1Dx = 1.288 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.7253 (4) ÅCell parameters from 3944 reflections
b = 8.6778 (5) Åθ = 3.6–28.0°
c = 11.5759 (7) ŵ = 0.09 mm1
α = 72.136 (5)°T = 293 K
β = 87.590 (4)°Rod, colourless
γ = 75.671 (4)°0.41 × 0.15 × 0.10 mm
V = 715.16 (7) Å3
Data collection top
Oxford Xcalibur Sapphire3
diffractometer
3326 independent reflections
Radiation source: fine-focus sealed tube2048 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.033
Detector resolution: 16.1049 pixels mm-1θmax = 28.0°, θmin = 3.6°
ω scansh = 1010
Absorption correction: multi-scan
(CrysAlis PRO; Oxford Diffraction, 2010)
k = 1111
Tmin = 0.986, Tmax = 1.000l = 1515
12592 measured reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.050All H-atom parameters refined
wR(F2) = 0.161 w = 1/[σ2(Fo2) + (0.0805P)2 + 0.0541P]
where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
3326 reflectionsΔρmax = 0.18 e Å3
258 parametersΔρmin = 0.15 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.025 (5)
Crystal data top
C14H19N3O3γ = 75.671 (4)°
Mr = 277.32V = 715.16 (7) Å3
Triclinic, P1Z = 2
a = 7.7253 (4) ÅMo Kα radiation
b = 8.6778 (5) ŵ = 0.09 mm1
c = 11.5759 (7) ÅT = 293 K
α = 72.136 (5)°0.41 × 0.15 × 0.10 mm
β = 87.590 (4)°
Data collection top
Oxford Xcalibur Sapphire3
diffractometer
3326 independent reflections
Absorption correction: multi-scan
(CrysAlis PRO; Oxford Diffraction, 2010)
2048 reflections with I > 2σ(I)
Tmin = 0.986, Tmax = 1.000Rint = 0.033
12592 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0500 restraints
wR(F2) = 0.161All H-atom parameters refined
S = 1.01Δρmax = 0.18 e Å3
3326 reflectionsΔρmin = 0.15 e Å3
258 parameters
Special details top

Experimental. CrysAlis PRO, Oxford Diffraction Ltd., Version 1.171.34.40 (release 27–08-2010 CrysAlis171. NET) (compiled Aug 27 2010,11:50:40) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
H1G0.686 (2)0.488 (2)0.1769 (16)0.058 (5)*
H1N0.355 (3)0.457 (3)0.1255 (19)0.073 (6)*
H2B0.627 (3)0.306 (3)0.492 (2)0.083 (7)*
H50.131 (3)0.911 (3)0.1984 (19)0.068 (6)*
H2G0.658 (2)0.341 (2)0.1307 (17)0.058 (5)*
H20.139 (3)0.650 (3)0.0047 (19)0.077 (6)*
H1A0.371 (3)0.281 (3)0.342 (2)0.078 (7)*
H4B0.829 (3)0.102 (3)0.2722 (19)0.068 (6)*
H2A0.511 (3)0.122 (3)0.427 (2)0.080 (7)*
H1B0.515 (3)0.476 (3)0.3923 (17)0.062 (5)*
H30.304 (3)0.896 (3)0.050 (2)0.085 (7)*
H6G1.080 (4)0.148 (3)0.346 (2)0.101 (8)*
H5G0.980 (4)0.305 (4)0.247 (3)0.124 (13)*
H4G0.777 (3)0.507 (3)0.471 (2)0.087 (7)*
H3B0.823 (3)0.066 (3)0.421 (3)0.104 (9)*
H1D1.060 (4)0.380 (4)0.412 (3)0.129 (11)*
H1M0.483 (4)0.116 (4)0.260 (3)0.120 (10)*
H3G0.785 (4)0.556 (4)0.318 (3)0.118 (10)*
H2D0.965 (4)0.242 (4)0.501 (3)0.113 (13)*
N20.0902 (2)0.64318 (19)0.07084 (14)0.0555 (4)
C20.0822 (3)0.7087 (3)0.04216 (19)0.0610 (5)
C30.1777 (3)0.8475 (3)0.0709 (2)0.0676 (6)
N30.1018 (3)0.9239 (2)0.13047 (18)0.0770 (6)
C50.0719 (3)0.8599 (3)0.1575 (2)0.0676 (6)
C60.1689 (2)0.7219 (2)0.12800 (16)0.0507 (5)
C0'0.3641 (3)0.6548 (2)0.15965 (16)0.0526 (5)
O00.45127 (19)0.73629 (17)0.19233 (15)0.0750 (5)
N10.4342 (2)0.50270 (18)0.15107 (13)0.0512 (4)
C1G0.6165 (3)0.4068 (3)0.18565 (17)0.0522 (5)
C1B0.6390 (2)0.2881 (2)0.31614 (15)0.0463 (4)
C1A0.4881 (3)0.1961 (3)0.34526 (18)0.0556 (5)
C1'0.4672 (2)0.0999 (2)0.26079 (18)0.0535 (5)
O10.4980 (2)0.06169 (17)0.31539 (14)0.0766 (5)
O20.4235 (2)0.16177 (18)0.15526 (14)0.0800 (5)
C1B10.6297 (3)0.3843 (3)0.4090 (2)0.0579 (5)
C1G10.7878 (3)0.4591 (4)0.4060 (3)0.0856 (9)
C1D0.9640 (4)0.3269 (6)0.4232 (5)0.1135 (13)
C1G20.9768 (3)0.2346 (5)0.3296 (4)0.1009 (12)
C1B20.8196 (3)0.1594 (3)0.3335 (3)0.0713 (7)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N20.0678 (11)0.0495 (9)0.0588 (9)0.0233 (8)0.0016 (8)0.0230 (8)
C20.0650 (13)0.0623 (12)0.0664 (13)0.0266 (11)0.0017 (10)0.0261 (11)
C30.0637 (14)0.0751 (15)0.0705 (14)0.0211 (12)0.0061 (11)0.0288 (12)
N30.0736 (13)0.0793 (13)0.0879 (13)0.0074 (10)0.0007 (10)0.0483 (11)
C50.0757 (15)0.0648 (13)0.0757 (14)0.0161 (11)0.0057 (11)0.0406 (12)
C60.0682 (12)0.0413 (9)0.0484 (10)0.0199 (9)0.0012 (8)0.0169 (8)
C0'0.0694 (12)0.0426 (10)0.0535 (10)0.0224 (9)0.0011 (9)0.0187 (8)
O00.0791 (10)0.0548 (8)0.1081 (12)0.0284 (7)0.0078 (8)0.0386 (8)
N10.0608 (10)0.0456 (9)0.0545 (9)0.0180 (8)0.0039 (7)0.0213 (7)
C1G0.0557 (11)0.0587 (11)0.0546 (11)0.0218 (10)0.0137 (9)0.0305 (10)
C1B0.0481 (9)0.0506 (10)0.0504 (10)0.0115 (8)0.0018 (7)0.0309 (8)
C1A0.0754 (14)0.0515 (11)0.0498 (12)0.0268 (11)0.0066 (10)0.0213 (10)
C1'0.0599 (11)0.0471 (10)0.0624 (12)0.0201 (9)0.0019 (9)0.0231 (9)
O10.1225 (13)0.0489 (8)0.0686 (10)0.0361 (9)0.0017 (8)0.0203 (7)
O20.1212 (13)0.0572 (9)0.0672 (10)0.0219 (9)0.0310 (9)0.0226 (8)
C1B10.0643 (13)0.0654 (13)0.0600 (13)0.0169 (11)0.0028 (10)0.0413 (11)
C1G10.0698 (15)0.113 (2)0.116 (2)0.0320 (14)0.0060 (14)0.087 (2)
C1D0.0646 (17)0.158 (3)0.161 (4)0.024 (2)0.0146 (19)0.111 (3)
C1G20.0474 (14)0.138 (3)0.148 (3)0.0034 (16)0.0053 (16)0.101 (3)
C1B20.0628 (13)0.0753 (15)0.0874 (17)0.0008 (11)0.0115 (11)0.0538 (15)
Geometric parameters (Å, º) top
N2—C21.325 (3)C1A—C1'1.503 (2)
N2—C61.338 (2)C1A—H1A1.01 (2)
C2—C31.375 (3)C1A—H2A0.96 (2)
C2—H21.02 (2)C1'—O21.199 (2)
C3—N31.329 (3)C1'—O11.314 (2)
C3—H30.97 (2)O1—H1M0.93 (3)
N3—C51.330 (3)C1B1—C1G11.513 (3)
C5—C61.378 (3)C1B1—H2B0.99 (2)
C5—H50.94 (2)C1B1—H1B1.01 (2)
C6—C0'1.492 (3)C1G1—C1D1.523 (4)
C0'—O01.232 (2)C1G1—H4G0.96 (2)
C0'—N11.329 (2)C1G1—H3G1.10 (3)
N1—C1G1.449 (2)C1D—C1G21.519 (4)
N1—H1N0.91 (2)C1D—H1D0.95 (3)
C1G—C1B1.533 (3)C1D—H2D0.97 (3)
C1G—H1G0.968 (19)C1G2—C1B21.508 (4)
C1G—H2G0.975 (19)C1G2—H6G0.93 (3)
C1B—C1B21.532 (3)C1G2—H5G0.97 (3)
C1B—C1B11.540 (2)C1B2—H4B0.97 (2)
C1B—C1A1.540 (2)C1B2—H3B1.08 (3)
C2—N2—C6116.12 (16)C1B—C1A—H2A107.3 (13)
N2—C2—C3122.69 (19)H1A—C1A—H2A108.4 (17)
N2—C2—H2115.1 (12)O2—C1'—O1122.56 (17)
C3—C2—H2122.2 (12)O2—C1'—C1A124.60 (18)
N3—C3—C2121.6 (2)O1—C1'—C1A112.82 (18)
N3—C3—H3115.9 (13)C1'—O1—H1M109.9 (18)
C2—C3—H3122.5 (13)C1G1—C1B1—C1B113.19 (17)
C3—N3—C5115.73 (19)C1G1—C1B1—H2B108.2 (13)
N3—C5—C6122.96 (19)C1B—C1B1—H2B108.4 (13)
N3—C5—H5118.6 (12)C1G1—C1B1—H1B109.5 (11)
C6—C5—H5118.4 (12)C1B—C1B1—H1B108.6 (11)
N2—C6—C5120.85 (19)H2B—C1B1—H1B108.8 (17)
N2—C6—C0'118.04 (15)C1B1—C1G1—C1D111.5 (3)
C5—C6—C0'121.11 (16)C1B1—C1G1—H4G107.8 (14)
O0—C0'—N1123.34 (18)C1D—C1G1—H4G109.1 (14)
O0—C0'—C6121.32 (16)C1B1—C1G1—H3G109.0 (15)
N1—C0'—C6115.34 (15)C1D—C1G1—H3G109.3 (15)
C0'—N1—C1G125.42 (16)H4G—C1G1—H3G110 (2)
C0'—N1—H1N114.4 (13)C1G2—C1D—C1G1110.5 (2)
C1G—N1—H1N120.0 (13)C1G2—C1D—H1D108 (2)
N1—C1G—C1B113.67 (14)C1G1—C1D—H1D109 (2)
N1—C1G—H1G105.9 (11)C1G2—C1D—H2D105 (2)
C1B—C1G—H1G109.7 (11)C1G1—C1D—H2D108.5 (19)
N1—C1G—H2G109.3 (11)H1D—C1D—H2D116 (3)
C1B—C1G—H2G108.3 (11)C1B2—C1G2—C1D111.5 (3)
H1G—C1G—H2G110.0 (15)C1B2—C1G2—H6G107.6 (16)
C1B2—C1B—C1G109.94 (16)C1D—C1G2—H6G109.6 (16)
C1B2—C1B—C1B1108.88 (15)C1B2—C1G2—H5G106.4 (19)
C1G—C1B—C1B1111.26 (15)C1D—C1G2—H5G113 (2)
C1B2—C1B—C1A109.17 (17)H6G—C1G2—H5G108 (2)
C1G—C1B—C1A110.92 (14)C1G2—C1B2—C1B113.2 (2)
C1B1—C1B—C1A106.58 (14)C1G2—C1B2—H4B110.6 (12)
C1'—C1A—C1B115.47 (15)C1B—C1B2—H4B109.2 (12)
C1'—C1A—H1A107.4 (12)C1G2—C1B2—H3B108.5 (14)
C1B—C1A—H1A108.4 (12)C1B—C1B2—H3B108.4 (14)
C1'—C1A—H2A109.6 (13)H4B—C1B2—H3B106.8 (18)
C6—N2—C2—C31.2 (3)N1—C1G—C1B—C1A43.51 (19)
N2—C2—C3—N30.5 (3)C1B2—C1B—C1A—C1'65.4 (2)
C2—C3—N3—C51.5 (3)C1G—C1B—C1A—C1'55.9 (2)
C3—N3—C5—C60.9 (3)C1B1—C1B—C1A—C1'177.17 (18)
C2—N2—C6—C51.9 (3)C1B—C1A—C1'—O265.2 (3)
C2—N2—C6—C0'178.66 (16)C1B—C1A—C1'—O1116.4 (2)
N3—C5—C6—N20.9 (3)C1B2—C1B—C1B1—C1G153.0 (3)
N3—C5—C6—C0'179.67 (19)C1G—C1B—C1B1—C1G168.3 (2)
N2—C6—C0'—O0167.00 (17)C1A—C1B—C1B1—C1G1170.6 (2)
C5—C6—C0'—O013.5 (3)C1B—C1B1—C1G1—C1D55.2 (3)
N2—C6—C0'—N113.6 (2)C1B1—C1G1—C1D—C1G255.1 (5)
C5—C6—C0'—N1165.85 (18)C1G1—C1D—C1G2—C1B255.6 (5)
O0—C0'—N1—C1G4.3 (3)C1D—C1G2—C1B2—C1B56.3 (4)
C6—C0'—N1—C1G175.07 (15)C1G—C1B—C1B2—C1G268.7 (3)
C0'—N1—C1G—C1B93.3 (2)C1B1—C1B—C1B2—C1G253.4 (3)
N1—C1G—C1B—C1B2164.35 (15)C1A—C1B—C1B2—C1G2169.4 (2)
N1—C1G—C1B—C1B174.95 (18)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1N···O20.91 (2)2.40 (3)2.965 (2)120.2 (19)
N1—H1N···N20.91 (2)2.25 (2)2.707 (2)111 (2)
C1G—H1G···O00.96 (2)2.49 (2)2.852 (3)102.0 (15)
O1—H1M···O0i0.94 (3)1.75 (3)2.670 (2)165 (3)
C1B2—H4B···N3ii0.97 (2)2.54 (2)3.503 (4)171.0 (19)
Symmetry codes: (i) x, y1, z; (ii) x+1, y1, z.

Experimental details

Crystal data
Chemical formulaC14H19N3O3
Mr277.32
Crystal system, space groupTriclinic, P1
Temperature (K)293
a, b, c (Å)7.7253 (4), 8.6778 (5), 11.5759 (7)
α, β, γ (°)72.136 (5), 87.590 (4), 75.671 (4)
V3)715.16 (7)
Z2
Radiation typeMo Kα
µ (mm1)0.09
Crystal size (mm)0.41 × 0.15 × 0.10
Data collection
DiffractometerOxford Xcalibur Sapphire3
diffractometer
Absorption correctionMulti-scan
(CrysAlis PRO; Oxford Diffraction, 2010)
Tmin, Tmax0.986, 1.000
No. of measured, independent and
observed [I > 2σ(I)] reflections
12592, 3326, 2048
Rint0.033
(sin θ/λ)max1)0.661
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.050, 0.161, 1.01
No. of reflections3326
No. of parameters258
H-atom treatmentAll H-atom parameters refined
Δρmax, Δρmin (e Å3)0.18, 0.15

Computer programs: CrysAlis PRO (Oxford Diffraction, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 2012), PLATON (Spek, 2009).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1N···O20.91 (2)2.40 (3)2.965 (2)120.2 (19)
N1—H1N···N20.91 (2)2.25 (2)2.707 (2)111 (2)
C1G—H1G···O00.96 (2)2.49 (2)2.852 (3)102.0 (15)
O1—H1M···O0i0.94 (3)1.75 (3)2.670 (2)165 (3)
C1B2—H4B···N3ii0.97 (2)2.54 (2)3.503 (4)171.0 (19)
Symmetry codes: (i) x, y1, z; (ii) x+1, y1, z.
 

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